Pay0005322 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005322
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Poly(A)-specific ribonuclease
Location	chr06: 33017853 .. 33018392 (+)
RNA-Seq Expression	Pay0005322
Synteny	Pay0005322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATTGAGTTCCTTGGCTTTCTCCGATCAACTACGAGAGGTGCTCCCGAGGAACATCTTTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTAGCCGGCCTCACTTTGATGGATGAGAATGAGCATGTTGGGTTGTATTGGGTGTTCACCTTTTCTGATTTTAATGAACAAAAAGACTTTTCTAGTCCTACGTCAATCCAATATTTGAAGAACAACAAAGGGTTTGAATTCATGAAACAGAGGAAAGATGGAATTCCATCGATTGAATTTCGACGTGCATTATTTCTGCCCATCTTTTCTAGCAATCAAATAACCAAATGGAACACATTCCATCACATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGTTAGAGTACATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGCGAACGACCTCAAGCACATGATTCGCAATTGTGAACACTTAACATTTATTGTCATTTTCTCGCAGAAACTTTGGATTGGTCTATAA

mRNA sequence

ATGGACATTGAGTTCCTTGGCTTTCTCCGATCAACTACGAGAGGTGCTCCCGAGGAACATCTTTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTAGCCGGCCTCACTTTGATGGATGAGAATGAGCATGTTGGGTTGTATTGGGTGTTCACCTTTTCTGATTTTAATGAACAAAAAGACTTTTCTAGTCCTACGTCAATCCAATATTTGAAGAACAACAAAGGGTTTGAATTCATGAAACAGAGGAAAGATGGAATTCCATCGATTGAATTTCGACGTGCATTATTTCTGCCCATCTTTTCTAGCAATCAAATAACCAAATGGAACACATTCCATCACATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGTTAGAGTACATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGCGAACGACCTCAAGCACATGATTCGCAATTGTGAACACTTAACATTTATTGTCATTTTCTCGCAGAAACTTTGGATTGGTCTATAA

Coding sequence (CDS)

ATGGACATTGAGTTCCTTGGCTTTCTCCGATCAACTACGAGAGGTGCTCCCGAGGAACATCTTTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTAGCCGGCCTCACTTTGATGGATGAGAATGAGCATGTTGGGTTGTATTGGGTGTTCACCTTTTCTGATTTTAATGAACAAAAAGACTTTTCTAGTCCTACGTCAATCCAATATTTGAAGAACAACAAAGGGTTTGAATTCATGAAACAGAGGAAAGATGGAATTCCATCGATTGAATTTCGACGTGCATTATTTCTGCCCATCTTTTCTAGCAATCAAATAACCAAATGGAACACATTCCATCACATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGTTAGAGTACATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGCGAACGACCTCAAGCACATGATTCGCAATTGTGAACACTTAACATTTATTGTCATTTTCTCGCAGAAACTTTGGATTGGTCTATAA

Protein sequence

MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL

Homology

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BLAST of Pay0005322 vs. ExPASy Swiss-Prot
Match: Q9LXM4 (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-19
Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF   LR TT+ A +E  Y D+ F+++  K++QL GLTL D N  +G  W   FSDF
Sbjct: 16  IDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQL-GLTLFDINGRIGGTWEINFSDF 75

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
               D  +  SI++L+ N G +  K R++GI    F   +F  +  + +   W TFH  Y
Sbjct: 76  GVD-DARNEKSIEFLRRN-GLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSY 135

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLT 167
           D+AYLLK      +      F+    R LG+  DLK M   CE L+
Sbjct: 136 DIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS 178

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BLAST of Pay0005322 vs. ExPASy Swiss-Prot
Match: O64773 (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-16
Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF G L+ T   A +E  Y+D+KFN+++  ++QL GLTL  +   +   W    SDF
Sbjct: 29  IDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLIQL-GLTLFGKG--ITKTWEINLSDF 88

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NE K   +  SI +LKNN G +  K R++GI   EF       +   +   +W TF   Y
Sbjct: 89  NESKSLKNDKSIAFLKNN-GLDLDKIREEGIGIEEFFMEFSQILNEKHGKMRWVTFQGSY 148

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGT-ANDLKHMIRNCEHLT 167
           D AYLLK +  + + E   EF    Q+ LG    D+K M   C  L+
Sbjct: 149 DKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLCSGLS 191

[Close]

BLAST of Pay0005322 vs. ExPASy Swiss-Prot
Match: Q9SFX6 (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=CAF1-3 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF G L+ T   A EE  Y+D+KFN+++  ++QL G TL D        W    SDF
Sbjct: 33  IDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQL-GFTLFDRRGFAKT-WEINLSDF 92

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +E K F +  SI +LK+N G    K R++GI   EF R     +   +    W  F   Y
Sbjct: 93  DEHKCFKNDKSIAFLKSN-GLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSY 152

Query: 121 DVAYLLK-LMMIRTMLEYMVEFAIIAQRHLGT-ANDLKHMIRNCEHLT 167
           D AYL+K L   + + E   EF    Q+ LG    D+K +  +C  L+
Sbjct: 153 DNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLS 197

[Close]

BLAST of Pay0005322 vs. ExPASy Swiss-Prot
Match: Q9C6M9 (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13
Identity = 58/168 (34.52%), Postives = 84/168 (50.00%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF G L+ T   A EE  Y+D+KFN+++  ++QL G TL D    +   W    SDF
Sbjct: 28  IDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQL-GFTLFD-RRGITKTWEINLSDF 87

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NE K F +  SI +LK+N G    K  ++GI   EF R     +   +    W  F   Y
Sbjct: 88  NEHKCFKNDKSIAFLKSN-GLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSY 147

Query: 121 DVAYLLK-LMMIRTMLEYMVEFAIIAQRHLGT-ANDLKHMIRNCEHLT 167
           D AYL+K L   + + E   EF    ++ LG    D+K +  +C  L+
Sbjct: 148 DNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLS 192

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BLAST of Pay0005322 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 54/180 (30.00%), Postives = 82/180 (45.56%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPE--------EHLYQDLKFNLNHLKILQLAGLTLMDENEHV--- 60
           MD EF G +  T    P         E+ Y  LK N+N LK++QL GLTL DE  ++   
Sbjct: 43  MDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQL-GLTLSDEKGNLPTC 102

Query: 61  ----GLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIF 120
                  W F F +FN   D  +  SI+ L+ +   +  K  + G+ +  F   L     
Sbjct: 103 GTNKQCIWQFNFREFNVISDMFALDSIELLRKS-AIDLEKNNECGVDAKRFAELLMGSGV 162

Query: 121 SSNQITKWNTFHHIYDVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
             N    W TFH  YD  YLLKL+  + + E + +F    ++      D+K+++  C +L
Sbjct: 163 VLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNL 220

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BLAST of Pay0005322 vs. ExPASy TrEMBL
Match: A0A1S3BKU5 (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103491125 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.9e-98
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF
Sbjct: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY
Sbjct: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 180
           DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
Sbjct: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 179

[Close]

BLAST of Pay0005322 vs. ExPASy TrEMBL
Match: A0A5D3D7M4 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001030 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.0e-96
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF
Sbjct: 31  MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NEQKDFSSPTSIQYLKNNKGFEF KQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY
Sbjct: 91  NEQKDFSSPTSIQYLKNNKGFEFTKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 180
           DVAYLLKLMMIRTMLE MVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
Sbjct: 151 DVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 209

[Close]

BLAST of Pay0005322 vs. ExPASy TrEMBL
Match: A0A5A7TN62 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002920 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.5e-74
Identity = 146/165 (88.48%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF
Sbjct: 31  MDTEFPGFLRSTLRGAPEEHFYQDLKFNLNHLKILQL-GLTLMDENEHVGLSWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +EQ DFSSPTSIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IY
Sbjct: 91  DEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRA-FLPIFSSNRITKWITFHGIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
           DVAYLLKLMMIRTM E MVEFAIIAQRHLGT NDLKHMIRNCE+L
Sbjct: 151 DVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYL 193

[Close]

BLAST of Pay0005322 vs. ExPASy TrEMBL
Match: A0A5D3D333 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001870 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.5e-74
Identity = 146/165 (88.48%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF
Sbjct: 31  MDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQL-GLTLMDENEHVGLSWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +EQ DFSSPTSIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IY
Sbjct: 91  DEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRA-FLPIFSSNRITKWITFHGIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
           DVAYLLKLMMIRTM E MVEFAIIAQRHLGT NDLKHMIRNCE+L
Sbjct: 151 DVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYL 193

[Close]

BLAST of Pay0005322 vs. ExPASy TrEMBL
Match: A0A1S3BY95 (Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494884 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.5e-74
Identity = 146/165 (88.48%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF
Sbjct: 31  MDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQL-GLTLMDENEHVGLSWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +EQ DFSSPTSIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IY
Sbjct: 91  DEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRA-FLPIFSSNRITKWITFHGIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
           DVAYLLKLMMIRTM E MVEFAIIAQRHLGT NDLKHMIRNCE+L
Sbjct: 151 DVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYL 193

[Close]

BLAST of Pay0005322 vs. NCBI nr
Match: XP_008449175.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 3.9e-98
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF
Sbjct: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY
Sbjct: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 180
           DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
Sbjct: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 179

[Close]

BLAST of Pay0005322 vs. NCBI nr
Match: TYK19450.1 (putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF
Sbjct: 31  MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NEQKDFSSPTSIQYLKNNKGFEF KQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY
Sbjct: 91  NEQKDFSSPTSIQYLKNNKGFEFTKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 180
           DVAYLLKLMMIRTMLE MVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
Sbjct: 151 DVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL 209

[Close]

BLAST of Pay0005322 vs. NCBI nr
Match: KAA0044544.1 (putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 146/165 (88.48%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF
Sbjct: 31  MDTEFPGFLRSTLRGAPEEHFYQDLKFNLNHLKILQL-GLTLMDENEHVGLSWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +EQ DFSSPTSIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IY
Sbjct: 91  DEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRA-FLPIFSSNRITKWITFHGIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
           DVAYLLKLMMIRTM E MVEFAIIAQRHLGT NDLKHMIRNCE+L
Sbjct: 151 DVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYL 193

[Close]

BLAST of Pay0005322 vs. NCBI nr
Match: XP_008454486.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >TYK17039.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 146/165 (88.48%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF
Sbjct: 31  MDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQL-GLTLMDENEHVGLSWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +EQ DFSSPTSIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IY
Sbjct: 91  DEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRA-FLPIFSSNRITKWITFHGIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
           DVAYLLKLMMIRTM E MVEFAIIAQRHLGT NDLKHMIRNCE+L
Sbjct: 151 DVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYL 193

[Close]

BLAST of Pay0005322 vs. NCBI nr
Match: XP_008466654.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >KAA0038652.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYK31255.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 1.0e-69
Identity = 142/165 (86.06%), Postives = 145/165 (87.88%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           MD EFLGFLRST RGAPEEHLYQDLKFNLNHLKILQL GLTLMD+NEHVGL WVFTFSDF
Sbjct: 31  MDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQL-GLTLMDKNEHVGLSWVFTFSDF 90

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +EQ DFSSPTSIQYLKNNK FEF K RK  IPS EFRRA FLPIFSSN+ITKW TFH IY
Sbjct: 91  DEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRA-FLPIFSSNRITKWITFHGIY 150

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
           DVAYLLKLMMIRTM E MVEFA IAQR LGT NDLKHMI NCEHL
Sbjct: 151 DVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHL 193

[Close]

BLAST of Pay0005322 vs. TAIR 10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-20
Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF   LR TT+ A +E  Y D+ F+++  K++QL GLTL D N  +G  W   FSDF
Sbjct: 16  IDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQL-GLTLFDINGRIGGTWEINFSDF 75

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
               D  +  SI++L+ N G +  K R++GI    F   +F  +  + +   W TFH  Y
Sbjct: 76  GVD-DARNEKSIEFLRRN-GLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSY 135

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHLT 167
           D+AYLLK      +      F+    R LG+  DLK M   CE L+
Sbjct: 136 DIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS 178

[Close]

BLAST of Pay0005322 vs. TAIR 10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-17
Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF G L+ T   A +E  Y+D+KFN+++  ++QL GLTL  +   +   W    SDF
Sbjct: 29  IDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLIQL-GLTLFGKG--ITKTWEINLSDF 88

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NE K   +  SI +LKNN G +  K R++GI   EF       +   +   +W TF   Y
Sbjct: 89  NESKSLKNDKSIAFLKNN-GLDLDKIREEGIGIEEFFMEFSQILNEKHGKMRWVTFQGSY 148

Query: 121 DVAYLLKLMMIRTMLEYMVEFAIIAQRHLGT-ANDLKHMIRNCEHLT 167
           D AYLLK +  + + E   EF    Q+ LG    D+K M   C  L+
Sbjct: 149 DKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLCSGLS 191

[Close]

BLAST of Pay0005322 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-15
Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 0


Query: 1   MDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDE--------NEHVG 60
           MD EF G +     T     E+ Y+ LK N+N LK++QL GLT  DE         ++  
Sbjct: 39  MDTEFPGIVCRPVGTFKTNTEYHYETLKTNVNILKMIQL-GLTFSDEKGNLPTCGTDNKY 98

Query: 61  LYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQI 120
             W F F +F+ + D  +  SI+ L+ + G +F+K  + GI S  F   L       N+ 
Sbjct: 99  CIWQFNFREFDLESDIYATDSIELLRQS-GIDFVKNNEFGIDSKRFAELLMSSGIVLNEN 158

Query: 121 TKWNTFHHIYDVAYLLKLMMIRTMLEYMVEFAIIAQRHLGTANDLKHMIRNCEHL 166
             W TFH  YD  YLLKL+  + + E    F  +   +     D+KH+++ C  L
Sbjct: 159 VHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVYDIKHLMKFCNSL 211

[Close]

BLAST of Pay0005322 vs. TAIR 10
Match: AT1G27820.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF G L+ T   A EE  Y+D+KFN+++  ++QL G TL D        W    SDF
Sbjct: 33  IDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQL-GFTLFDRRGFAKT-WEINLSDF 92

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           +E K F +  SI +LK+N G    K R++GI   EF R     +   +    W  F   Y
Sbjct: 93  DEHKCFKNDKSIAFLKSN-GLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSY 152

Query: 121 DVAYLLK-LMMIRTMLEYMVEFAIIAQRHLGT-ANDLKHMIRNCEHLT 167
           D AYL+K L   + + E   EF    Q+ LG    D+K +  +C  L+
Sbjct: 153 DNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLS 197

[Close]

BLAST of Pay0005322 vs. TAIR 10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.9e-14
Identity = 58/168 (34.52%), Postives = 84/168 (50.00%), Query Frame = 0


Query: 1   MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDF 60
           +D EF G L+ T   A EE  Y+D+KFN+++  ++QL G TL D    +   W    SDF
Sbjct: 28  IDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQL-GFTLFD-RRGITKTWEINLSDF 87

Query: 61  NEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIY 120
           NE K F +  SI +LK+N G    K  ++GI   EF R     +   +    W  F   Y
Sbjct: 88  NEHKCFKNDKSIAFLKSN-GLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSY 147

Query: 121 DVAYLLK-LMMIRTMLEYMVEFAIIAQRHLGT-ANDLKHMIRNCEHLT 167
           D AYL+K L   + + E   EF    ++ LG    D+K +  +C  L+
Sbjct: 148 DNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLS 192

The following BLAST results are available for this feature:

BLAST of Pay0005322 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXM4	4.9e-19	36.75	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
O64773	6.7e-16	35.93	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SFX6	1.8e-13	35.12	Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9C6M9	6.9e-13	34.52	Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9S9P2	1.0e-11	30.00	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Pay0005322 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BKU5	1.9e-98	100.00	putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A5D3D7M4	1.0e-96	98.88	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TN62	9.5e-74	88.48	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3D333	9.5e-74	88.48	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BY95	9.5e-74	88.48	Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494884 PE=3 SV=1	[more]

BLAST of Pay0005322 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449175.1	3.9e-98	100.00	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]	[more]
TYK19450.1	2.2e-96	98.88	putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]	[more]
KAA0044544.1	2.0e-73	88.48	putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]	[more]
XP_008454486.1	2.0e-73	88.48	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >TYK17039....	[more]
XP_008466654.1	1.0e-69	86.06	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >KAA003865...	[more]

BLAST of Pay0005322 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44240.1	3.5e-20	36.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G61470.1	4.7e-17	35.93	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32070.1	1.5e-15	32.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27820.1	1.3e-14	35.12	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27890.1	4.9e-14	34.52	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..172 e-value: 1.2E-29 score: 105.2
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..165
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 1..165
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005322.1	Pay0005322.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity