Pay0004912 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004912
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	E3 ubiquitin-protein ligase RHA1B
Location	chr09: 22597028 .. 22598087 (-)
RNA-Seq Expression	Pay0004912
Synteny	Pay0004912

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTCTTCTTCATTTGTTTACATTTCCGCCATGGGTTTCCCAGCAACTTACACTGAGCTTCTTCTCCCTAAGCTCTTCATCCATTTGCTCTCCTTCCTCGGCTTCCTCCGTAAGCTTATTTCCTTCCTCTTCCGCCTCTTTGGCCTCCAAGATTTCCTCGAACCCGACATTCCTTGGCCCAATCCCTCCGATTCCTTCCCTACTTCTCCCTTCACCCACCTCGATCCTCTCTCCGCTGCCCTTCTCCGTGAGATTCTCCCCGTCGTCAAGTTCTCCGACCTTCTCGACCCCCCTGACTGCTGCGCTGTTTGTCTCTACGAGTTCGAGTCCGACGATGAGATCCGCCGTCTCGCTAACTGCCGTCACATCTTCCACCGCGGATGCCTCGATCGATGGATCGGTTACGGTCAGAGAACGTGCCCGCTTTGTAGAACTGTGTTTATTCCTCCTGATTTGAGAAGTGGTGGTGGTTGTAATTTTGATGATAGGCTTTGGGAGGATTCCGAAATCTTTGAACCTCTCCACACCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATCTTCTCACAACCGATGGTTTGTAGCTTTTGAAGATTTGATTGATCTTTTTTTTTTTTTGTGTGGATTTTGCTGCTCTGCTTCTTCTCATCAATCGATATCGGAAAATAGAAATAAAATTTAAAAAAAAAAAAGGAGAGATGGTAGAGATGGTAGTGATGGAGATGAATGAGTTTAATGGGTGAGGGAATATGTTTGCTGTTCTTCTTTGTATATACCAAAAAAAAAAAAAAAAGTTCCTAAAAGGAACTGGAAAATCAAAATCAAAATCAATTACAGGACTCAGAATTAGTTCTTCATCATCATCTTCTTCTTCTTGTTGTCCTAACTTTTCCATGTTTTTCTTTTTTTGTTTCTCTTTAACAATACACTTCAGAAATTGAAATCGATAGAATACAATTGAGAATTGATCCTTTCTTGTTCATGCGCAAGTCTTGAATCTTACTAAATTGCAAAATTAAGCTATGGTGTTATTCTTATCATTG

mRNA sequence

TTCTTCTTCTTCTTCTTCTTCTTCATTTGTTTACATTTCCGCCATGGGTTTCCCAGCAACTTACACTGAGCTTCTTCTCCCTAAGCTCTTCATCCATTTGCTCTCCTTCCTCGGCTTCCTCCGTAAGCTTATTTCCTTCCTCTTCCGCCTCTTTGGCCTCCAAGATTTCCTCGAACCCGACATTCCTTGGCCCAATCCCTCCGATTCCTTCCCTACTTCTCCCTTCACCCACCTCGATCCTCTCTCCGCTGCCCTTCTCCGTGAGATTCTCCCCGTCGTCAAGTTCTCCGACCTTCTCGACCCCCCTGACTGCTGCGCTGTTTGTCTCTACGAGTTCGAGTCCGACGATGAGATCCGCCGTCTCGCTAACTGCCGTCACATCTTCCACCGCGGATGCCTCGATCGATGGATCGGTTACGGTCAGAGAACGTGCCCGCTTTGTAGAACTGTGTTTATTCCTCCTGATTTGAGAAGTGGTGGTGGTTGTAATTTTGATGATAGGCTTTGGGAGGATTCCGAAATCTTTGAACCTCTCCACACCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATCTTCTCACAACCGATGGTTTGTAGCTTTTGAAGATTTGATTGATCTTTTTTTTTTTTTGTGTGGATTTTGCTGCTCTGCTTCTTCTCATCAATCGATATCGGAAAATAGAAATAAAATTTAAAAAAAAAAAAGGAGAGATGGTAGAGATGGTAGTGATGGAGATGAATGAGTTTAATGGGTGAGGGAATATGTTTGCTGTTCTTCTTTGTATATACCAAAAAAAAAAAAAAAAGTTCCTAAAAGGAACTGGAAAATCAAAATCAAAATCAATTACAGGACTCAGAATTAGTTCTTCATCATCATCTTCTTCTTCTTGTTGTCCTAACTTTTCCATGTTTTTCTTTTTTTGTTTCTCTTTAACAATACACTTCAGAAATTGAAATCGATAGAATACAATTGAGAATTGATCCTTTCTTGTTCATGCGCAAGTCTTGAATCTTACTAAATTGCAAAATTAAGCTATGGTGTTATTCTTATCATTG

Coding sequence (CDS)

ATGGGTTTCCCAGCAACTTACACTGAGCTTCTTCTCCCTAAGCTCTTCATCCATTTGCTCTCCTTCCTCGGCTTCCTCCGTAAGCTTATTTCCTTCCTCTTCCGCCTCTTTGGCCTCCAAGATTTCCTCGAACCCGACATTCCTTGGCCCAATCCCTCCGATTCCTTCCCTACTTCTCCCTTCACCCACCTCGATCCTCTCTCCGCTGCCCTTCTCCGTGAGATTCTCCCCGTCGTCAAGTTCTCCGACCTTCTCGACCCCCCTGACTGCTGCGCTGTTTGTCTCTACGAGTTCGAGTCCGACGATGAGATCCGCCGTCTCGCTAACTGCCGTCACATCTTCCACCGCGGATGCCTCGATCGATGGATCGGTTACGGTCAGAGAACGTGCCCGCTTTGTAGAACTGTGTTTATTCCTCCTGATTTGAGAAGTGGTGGTGGTTGTAATTTTGATGATAGGCTTTGGGAGGATTCCGAAATCTTTGAACCTCTCCACACCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATCTTCTCACAACCGATGGTTTGTAG

Protein sequence

MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSPFTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLLTTDGL

Homology

[Close]

BLAST of Pay0004912 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-44
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFP  YTE+ LPKLF+  LS LGF+R ++  +FR  GL DFLE D  WP+ + S+PT  
Sbjct: 1   MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYT-SYPTRI 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLL----DPPDCCAVCLYEFESDDEIRRLANCRHIFHR 120
                P SA L+REILPV+KF +L     D P+ CAVCLYEFE + EIR L NCRHIFHR
Sbjct: 61  PETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHR 120

Query: 121 GCLDRWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFE 163
            CLDRW+ + Q+TCPLCRT F+P +++      F+ RLW  S + +
Sbjct: 121 SCLDRWMDHDQKTCPLCRTPFVPDEMQE----EFNQRLWAASGVHD 161

[Close]

BLAST of Pay0004912 vs. ExPASy Swiss-Prot
Match: Q9SUS4 (Probable E3 ubiquitin-protein ligase RHA1A OS=Arabidopsis thaliana OX=3702 GN=RHA1A PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-24
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 1   MGFPATY-TELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTS 60
           MG P  + TEL +P   + +L  +GF R ++  L    GL  FL+        +++    
Sbjct: 1   MGLPEDFITELQIPSYILKILYVIGFFRDIVDALCPYIGLPRFLD-------HNETSAPD 60

Query: 61  PFTHLDPLSAALLREILPVVKFSDL-LDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGC 120
              H    SA+L  E++PVV+FSDL  DP DCC VCL +FESDD++R+L  C H+FH  C
Sbjct: 61  LTRHALSTSASLANELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYC 120

Query: 121 LDRWI-GYGQRTCPLCRTVFIPPD 142
           LDRWI  Y +  CP+CR  F+P +
Sbjct: 121 LDRWIVDYNKMKCPVCRHRFLPKE 137

[Close]

BLAST of Pay0004912 vs. ExPASy Swiss-Prot
Match: Q9SUS5 (E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-24
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MG P  + EL +P   +  L  +GF R ++  L    GL  FL+        +++  + P
Sbjct: 1   MGLPTDFKELQIPGYVLKTLYVIGFFRDMVDALCPYIGLPSFLD-------HNETSRSDP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLL-DPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCL 120
                  SA L  E++PVV+FSDLL DP DCC VCL +F SDD+IR+L  C H+FH  CL
Sbjct: 61  TRLALSTSATLANELIPVVRFSDLLTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCL 120

Query: 121 DRWI-GYGQRTCPLCRTVFIPPD 142
           DRWI    + TCP+CR  F+P +
Sbjct: 121 DRWIVDCNKITCPICRNRFLPEE 136

[Close]

BLAST of Pay0004912 vs. ExPASy Swiss-Prot
Match: Q9P7E1 (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.7e-11
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 91  CAVCLYEFESDDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRT 136
           C VCL  FE +DE RRL  C H FHR C+D+W+   Q +CPLCRT
Sbjct: 525 CLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT 569

[Close]

BLAST of Pay0004912 vs. ExPASy Swiss-Prot
Match: Q9SZL4 (RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 90  CCAVCLYEFESDDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPP 141
           CC +CL EFE++D +  L  C H+FH  C++ W+  G  TCPLCR+  + P
Sbjct: 61  CCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVLAP 111

[Close]

BLAST of Pay0004912 vs. ExPASy TrEMBL
Match: A0A1S3AU97 (E3 ubiquitin-protein ligase RHA1B OS=Cucumis melo OX=3656 GN=LOC103482771 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.3e-104
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP
Sbjct: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
           FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD
Sbjct: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180
           RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180

Query: 181 TTDGL 186
           TTDGL
Sbjct: 181 TTDGL 185

[Close]

BLAST of Pay0004912 vs. ExPASy TrEMBL
Match: A0A5A7TMZ8 (E3 ubiquitin-protein ligase RHA1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002380 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.2e-102
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNP DSFPTSP
Sbjct: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPPDSFPTSP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
           FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD
Sbjct: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180
           RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFE LHTDSSSSSSSSSSNLL
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFERLHTDSSSSSSSSSSNLL 180

Query: 181 TTDGL 186
           TTDGL
Sbjct: 181 TTDGL 185

[Close]

BLAST of Pay0004912 vs. ExPASy TrEMBL
Match: A0A0A0KQV2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152910 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.4e-98
Identity = 175/185 (94.59%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPATYTELLLPKLFIHLLSFLGFLRKLISF+FRLFGLQDFLEPDIPWPNP DSFPTSP
Sbjct: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFIFRLFGLQDFLEPDIPWPNPPDSFPTSP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
           FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD
Sbjct: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180
           RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLH+D      SSSSNLL
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHSD------SSSSNLL 179

Query: 181 TTDGL 186
           +TDGL
Sbjct: 181 STDGL 179

[Close]

BLAST of Pay0004912 vs. ExPASy TrEMBL
Match: A0A6J1K664 (E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita maxima OX=3661 GN=LOC111491048 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.0e-83
Identity = 151/173 (87.28%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPA+YTELLLPKLFIH+LS LGFLRKLIS LFRL GLQDFLEPDIPW N SDSFPT P
Sbjct: 1   MGFPASYTELLLPKLFIHVLSLLGFLRKLISLLFRLLGLQDFLEPDIPWSNHSDSFPTGP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
            T LDPLSAA+LREILPVV+FS+LLDPP+ CAVCLYEFE+DDEIRRLANCRHIFHRGCLD
Sbjct: 61  LTDLDPLSAAVLREILPVVRFSELLDPPESCAVCLYEFETDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSS 174
           RWIGYGQRTCPLCRTVFIPPDLR+ GGCNFDDR WEDSE+FE LHTDSSSSS+
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRT-GGCNFDDRPWEDSELFEALHTDSSSSST 172

[Close]

BLAST of Pay0004912 vs. ExPASy TrEMBL
Match: A0A6J1H5J7 (E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita moschata OX=3662 GN=LOC111459775 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 152/179 (84.92%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPA+YTELLLPKLFIH+LS LGFLRKLIS LF L GLQDFLEPDIPW N SDSFPT P
Sbjct: 1   MGFPASYTELLLPKLFIHVLSLLGFLRKLISLLFCLLGLQDFLEPDIPWSNHSDSFPTGP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
            T LDPLSAA+LREILPVV+FS+LLDPP+ CAVCLYEFE+DDEIRRLANCRHIFHRGCLD
Sbjct: 61  LTDLDPLSAAVLREILPVVRFSELLDPPESCAVCLYEFETDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNL 180
           RWIGYGQRTCPLCRTVFIPPDLR+ GGCNFDDR WEDSE+FE LHTDSSSSS+  S+ L
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRT-GGCNFDDRAWEDSELFEALHTDSSSSSTLLSAGL 178

[Close]

BLAST of Pay0004912 vs. NCBI nr
Match: XP_008437313.1 (PREDICTED: E3 ubiquitin-protein ligase RHA1B [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 1.1e-103
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP
Sbjct: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
           FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD
Sbjct: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180
           RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180

Query: 181 TTDGL 186
           TTDGL
Sbjct: 181 TTDGL 185

[Close]

BLAST of Pay0004912 vs. NCBI nr
Match: KAA0042739.1 (E3 ubiquitin-protein ligase RHA1B [Cucumis melo var. makuwa])

HSP 1 Score: 381.3 bits (978), Expect = 4.6e-102
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNP DSFPTSP
Sbjct: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPPDSFPTSP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
           FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD
Sbjct: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180
           RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFE LHTDSSSSSSSSSSNLL
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFERLHTDSSSSSSSSSSNLL 180

Query: 181 TTDGL 186
           TTDGL
Sbjct: 181 TTDGL 185

[Close]

BLAST of Pay0004912 vs. NCBI nr
Match: XP_004143977.2 (E3 ubiquitin-protein ligase RHA1B [Cucumis sativus] >KGN50076.1 hypothetical protein Csa_000207 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 6.9e-98
Identity = 175/185 (94.59%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPATYTELLLPKLFIHLLSFLGFLRKLISF+FRLFGLQDFLEPDIPWPNP DSFPTSP
Sbjct: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFIFRLFGLQDFLEPDIPWPNPPDSFPTSP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
           FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD
Sbjct: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSSSSNLL 180
           RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLH+D      SSSSNLL
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHSD------SSSSNLL 179

Query: 181 TTDGL 186
           +TDGL
Sbjct: 181 STDGL 179

[Close]

BLAST of Pay0004912 vs. NCBI nr
Match: XP_038906771.1 (E3 ubiquitin-protein ligase RHA1B [Benincasa hispida])

HSP 1 Score: 332.8 bits (852), Expect = 1.9e-87
Identity = 160/175 (91.43%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPA+YTELLLPKLFIH+LSFLGFLRKLIS LFRL GLQDFLEPDIPWPN  DSFPT P
Sbjct: 1   MGFPASYTELLLPKLFIHVLSFLGFLRKLISLLFRLLGLQDFLEPDIPWPNHPDSFPTGP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
           FT LDPLSAA+LREILPVVKFS+LLDPP+ CAVCLYEFE+DDEIRRLANCRHIFHRGCLD
Sbjct: 61  FTDLDPLSAAVLREILPVVKFSELLDPPESCAVCLYEFEADDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSSSS 176
           RWIGYGQRTCPLCRTVFIPPDLRS GGCNFDDRLWEDSEIFE LHTDSSSSSSSS
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRS-GGCNFDDRLWEDSEIFEALHTDSSSSSSSS 174

[Close]

BLAST of Pay0004912 vs. NCBI nr
Match: XP_022995549.1 (E3 ubiquitin-protein ligase RHA1B-like [Cucurbita maxima] >XP_023533861.1 E3 ubiquitin-protein ligase RHA1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.8 bits (813), Expect = 6.3e-83
Identity = 151/173 (87.28%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFPA+YTELLLPKLFIH+LS LGFLRKLIS LFRL GLQDFLEPDIPW N SDSFPT P
Sbjct: 1   MGFPASYTELLLPKLFIHVLSLLGFLRKLISLLFRLLGLQDFLEPDIPWSNHSDSFPTGP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLLDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLD 120
            T LDPLSAA+LREILPVV+FS+LLDPP+ CAVCLYEFE+DDEIRRLANCRHIFHRGCLD
Sbjct: 61  LTDLDPLSAAVLREILPVVRFSELLDPPESCAVCLYEFETDDEIRRLANCRHIFHRGCLD 120

Query: 121 RWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSSSS 174
           RWIGYGQRTCPLCRTVFIPPDLR+ GGCNFDDR WEDSE+FE LHTDSSSSS+
Sbjct: 121 RWIGYGQRTCPLCRTVFIPPDLRT-GGCNFDDRPWEDSELFEALHTDSSSSST 172

[Close]

BLAST of Pay0004912 vs. TAIR 10
Match: AT1G63840.1 (RING/U-box superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 8.3e-49
Identity = 103/174 (59.20%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFP  Y+ELLLPK+F +LLSFLG +RKLIS +F++ GL DFLEP+      S S+P  P
Sbjct: 1   MGFPVGYSELLLPKIFFYLLSFLGLIRKLISTMFKIIGLPDFLEPE----PVSTSWPDPP 60

Query: 61  FTHLDPLSAALLR-EILPVVKFSDLLDP-PDCCAVCLYEFESDDEIRRLANCRHIFHRGC 120
            T   P SAA+L  E+LPVV+FSD+  P  +CCAVCLY+FE+DDEIRRL NCRHIFHRGC
Sbjct: 61  PTLTKPDSAAILAGEMLPVVRFSDINRPESECCAVCLYDFENDDEIRRLTNCRHIFHRGC 120

Query: 121 LDRW-IGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFEPLHTDSSSS 172
           LDRW +GY Q TCPLCRT FIP  L+      F+ RLW  S        D SSS
Sbjct: 121 LDRWMMGYNQMTCPLCRTQFIPDHLQ----LEFNQRLWSQSSAVSSQLLDESSS 166

[Close]

BLAST of Pay0004912 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-45
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MGFP  YTE+ LPKLF+  LS LGF+R ++  +FR  GL DFLE D  WP+ + S+PT  
Sbjct: 1   MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYT-SYPTRI 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLL----DPPDCCAVCLYEFESDDEIRRLANCRHIFHR 120
                P SA L+REILPV+KF +L     D P+ CAVCLYEFE + EIR L NCRHIFHR
Sbjct: 61  PETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHR 120

Query: 121 GCLDRWIGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEIFE 163
            CLDRW+ + Q+TCPLCRT F+P +++      F+ RLW  S + +
Sbjct: 121 SCLDRWMDHDQKTCPLCRTPFVPDEMQE----EFNQRLWAASGVHD 161

[Close]

BLAST of Pay0004912 vs. TAIR 10
Match: AT5G41400.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 6.8e-43
Identity = 92/176 (52.27%), Postives = 115/176 (65.34%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPD-----IPWPNPSDS 60
           MG+P  YTELLLP++F+HLLS LG +R LI   FR+ GL DFLE D       W  P   
Sbjct: 1   MGYPVGYTELLLPRIFLHLLSLLGLIRTLIDTGFRILGLPDFLESDPVSSSSSWLEP-PY 60

Query: 61  FPTSPFTHLD-----PLSAALLREILPVVKFSDLLDP-----PDCCAVCLYEFESDDEIR 120
             T+   H +     P++A L  EILPV++FS+L  P      DCCAVCL+EFE+DDEIR
Sbjct: 61  MSTAAHHHQESSFFFPVAARLAGEILPVIRFSELTRPGFGSGSDCCAVCLHEFENDDEIR 120

Query: 121 RLANCRHIFHRGCLDRW-IGYGQRTCPLCRTVFIPPDLRSGGGCNFDDRLWEDSEI 161
           RL NC+HIFHR CLDRW +GY Q TCPLCRT FI  +L+      F+ R+W +SE+
Sbjct: 121 RLTNCQHIFHRSCLDRWMMGYNQMTCPLCRTPFISDELQVA----FNQRVWSESEL 171

[Close]

BLAST of Pay0004912 vs. TAIR 10
Match: AT4G11360.1 (RING-H2 finger A1B )

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 1   MGFPATYTELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTSP 60
           MG P  + EL +P   +  L  +GF R ++  L    GL  FL+        +++  + P
Sbjct: 1   MGLPTDFKELQIPGYVLKTLYVIGFFRDMVDALCPYIGLPSFLD-------HNETSRSDP 60

Query: 61  FTHLDPLSAALLREILPVVKFSDLL-DPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCL 120
                  SA L  E++PVV+FSDLL DP DCC VCL +F SDD+IR+L  C H+FH  CL
Sbjct: 61  TRLALSTSATLANELIPVVRFSDLLTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCL 120

Query: 121 DRWI-GYGQRTCPLCRTVFIPPD 142
           DRWI    + TCP+CR  F+P +
Sbjct: 121 DRWIVDCNKITCPICRNRFLPEE 136

[Close]

BLAST of Pay0004912 vs. TAIR 10
Match: AT4G11370.1 (RING-H2 finger A1A )

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 1   MGFPATY-TELLLPKLFIHLLSFLGFLRKLISFLFRLFGLQDFLEPDIPWPNPSDSFPTS 60
           MG P  + TEL +P   + +L  +GF R ++  L    GL  FL+        +++    
Sbjct: 1   MGLPEDFITELQIPSYILKILYVIGFFRDIVDALCPYIGLPRFLD-------HNETSAPD 60

Query: 61  PFTHLDPLSAALLREILPVVKFSDL-LDPPDCCAVCLYEFESDDEIRRLANCRHIFHRGC 120
              H    SA+L  E++PVV+FSDL  DP DCC VCL +FESDD++R+L  C H+FH  C
Sbjct: 61  LTRHALSTSASLANELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYC 120

Query: 121 LDRWI-GYGQRTCPLCRTVFIPPD 142
           LDRWI  Y +  CP+CR  F+P +
Sbjct: 121 LDRWIVDYNKMKCPVCRHRFLPKE 137

The following BLAST results are available for this feature:

BLAST of Pay0004912 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF92	3.5e-44	53.01	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q9SUS4	2.4e-24	41.67	Probable E3 ubiquitin-protein ligase RHA1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q9SUS5	2.4e-24	41.96	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 ...	[more]
Q9P7E1	6.7e-11	57.78	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]
Q9SZL4	1.5e-10	45.10	RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1	[more]

BLAST of Pay0004912 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AU97	5.3e-104	100.00	E3 ubiquitin-protein ligase RHA1B OS=Cucumis melo OX=3656 GN=LOC103482771 PE=4 S...	[more]
A0A5A7TMZ8	2.2e-102	98.92	E3 ubiquitin-protein ligase RHA1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0KQV2	3.4e-98	94.59	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152910 P...	[more]
A0A6J1K664	3.0e-83	87.28	E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita maxima OX=3661 GN=LOC1114910...	[more]
A0A6J1H5J7	1.5e-82	84.92	E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Pay0004912 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437313.1	1.1e-103	100.00	PREDICTED: E3 ubiquitin-protein ligase RHA1B [Cucumis melo]	[more]
KAA0042739.1	4.6e-102	98.92	E3 ubiquitin-protein ligase RHA1B [Cucumis melo var. makuwa]	[more]
XP_004143977.2	6.9e-98	94.59	E3 ubiquitin-protein ligase RHA1B [Cucumis sativus] >KGN50076.1 hypothetical pro...	[more]
XP_038906771.1	1.9e-87	91.43	E3 ubiquitin-protein ligase RHA1B [Benincasa hispida]	[more]
XP_022995549.1	6.3e-83	87.28	E3 ubiquitin-protein ligase RHA1B-like [Cucurbita maxima] >XP_023533861.1 E3 ubi...	[more]

BLAST of Pay0004912 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63840.1	8.3e-49	59.20	RING/U-box superfamily protein	[more]
AT3G61460.1	2.5e-45	53.01	brassinosteroid-responsive RING-H2	[more]
AT5G41400.1	6.8e-43	52.27	RING/U-box superfamily protein	[more]
AT4G11360.1	1.7e-25	41.96	RING-H2 finger A1B	[more]
AT4G11370.1	1.7e-25	41.67	RING-H2 finger A1A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 91..133 e-value: 2.6E-6 score: 37.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 90..134 e-value: 2.0E-12 score: 47.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 91..134 score: 12.504031
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 85..137 e-value: 8.7E-17 score: 62.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..185
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 1..158
None	No IPR available	PANTHER	PTHR45969:SF46	BNAA09G11240D PROTEIN	coord: 1..158
None	No IPR available	CDD	cd16448	RING-H2	coord: 91..134 e-value: 1.61704E-13 score: 60.1583
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 76..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004912.1	Pay0004912.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding