Homology
BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 357.8 bits (917), Expect = 5.1e-97
Identity = 289/1048 (27.58%), Postives = 477/1048 (45.52%), Query Frame = 0
Query: 415 WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTI---NRLGLPFLL-NV 474
W D+ H T D F + G V + KI G G I +G +L +V
Sbjct: 294 WVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDV 353
Query: 475 RLLQGLAANLIS----------------------ISQLCDKAIKSVSIKIDDAKVTLCNL 534
R + L NLIS S + K + ++ +A++ L
Sbjct: 354 RHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGEL 413
Query: 535 SKVEE---AGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVH 594
+ ++ LWHKR+G +S + + K I ++++ C C GKQ + V
Sbjct: 414 NAAQDEISVDLWHKRMGHMSEKGLQILAKKSLI---SYAKGTTVKPCDYCLFGKQHR-VS 473
Query: 595 KPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKP-------- 654
+ +IL+L++ D+ GPM+ +S+G + V +DD SR W+ +K
Sbjct: 474 FQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVF 533
Query: 655 ---YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRN 714
++L +E + R+++D G E+ ++ F E+ + GI HE + P PQ N V ER N
Sbjct: 534 QKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMN 593
Query: 715 RTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYEL----WKGRKPNV 774
RT+ E R M+ LP FW EA+ TAC++ N RS + ++E+ W ++ +
Sbjct: 594 RTIVEKVRSMLRMAKLPKSFWGEAVQTACYLIN----RSPSVPLAFEIPERVWTNKEVSY 653
Query: 775 KYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIID 834
+ +FG F ++ R D KS IF+GY YR+++ K V+ S +V+
Sbjct: 654 SHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFR 713
Query: 835 DLGKEPNRNLDDEDDKLRVQLILQSGDLIPPTHITKNNPSSFII--------GDIHSEII 894
+ R D +K++ I+ + IP T NNP+S G+ E+I
Sbjct: 714 E---SEVRTAADMSEKVK-NGIIPNFVTIPS---TSNNPTSAESTTDEVSEQGEQPGEVI 773
Query: 895 TRKKERKDYAKMVSN-----------------------------VCYTSSLEPTTISAAL 954
+ ++ + + V + V + EP ++ L
Sbjct: 774 EQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVL 833
Query: 955 S---DEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----- 1014
S + AMQEE+ ++N ++L+ P + KW+FK K D + +++R
Sbjct: 834 SHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARL 893
Query: 1015 -----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYV 1074
+IR +LS A ++ Q+DVK+ FL+G L EE+Y+
Sbjct: 894 VVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYM 953
Query: 1075 AQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYR-Q 1134
QP+GF + V KL K+LYGLKQAPR WY + +++ Q Y + +D ++ R
Sbjct: 954 EQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFS 1013
Query: 1135 GTDFLIVQIYVDDILFGGTSSG-----------EFEMSMVGELTFFLRFQIKQENIG--I 1194
+F+I+ +YVDD+L G G F+M +G L +I +E +
Sbjct: 1014 ENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKL 1073
Query: 1195 FFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTN------LYRSIIGSL 1254
+ SQEKY + ++ +F M A+ TP A +LK++K V+ Y S +GSL
Sbjct: 1074 WLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSL 1133
Query: 1255 LY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVG 1314
+Y + +RPDIA AVGV +R+ +P H K IL+Y+ GT + + + L G
Sbjct: 1134 MYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG-GSDPILKG 1193
BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 321.2 bits (822), Expect = 5.3e-86
Identity = 296/1125 (26.31%), Postives = 477/1125 (42.40%), Query Frame = 0
Query: 413 CGWYFDSGCCRHMTGNADFFSDLIECKVGL-VVFEDGGKGKIIGKGTINRLGLPF---LL 472
CG+ DSG H+ + ++D +E L + G+ K I RL L
Sbjct: 287 CGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLE 346
Query: 473 NVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLC--NLSKVEEAG----------- 532
+V + A NL+S+ +L + +SI+ D + VT+ L V+ +G
Sbjct: 347 DVLFCKEAAGNLMSVKRLQE---AGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVINFQ 406
Query: 533 -------------LWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSL--ERCSECPVGKQ 592
LWH+R G +S + ++ + + D L+ L E C C GKQ
Sbjct: 407 AYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQ 466
Query: 593 VKSVHKPVNIASTSHI---LELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRY--TWIKHV 652
+ K + +HI L ++H D+ GP+ +L K V+ VD F+ Y T++
Sbjct: 467 ARLPFK--QLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKY 526
Query: 653 KP---------YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQ 712
K + + N + + D GRE+ + +F +GI + + P PQ
Sbjct: 527 KSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQL 586
Query: 713 NVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRS--GTTTTSYELWK 772
N V ER RT+ E AR M+ L FW EA+ TA ++ NR+ R+ ++ T YE+W
Sbjct: 587 NGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWH 646
Query: 773 GRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYS------------------- 832
+KP +K+ +FG+T ++ ++ + +D KS IF+GY
Sbjct: 647 NKKPYLKHLRVFGATVYV-HIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARD 706
Query: 833 --------ANSRAYRVYNQSSKTVMESIN-------------------------VIIDDL 892
NSRA + K ES N + D
Sbjct: 707 VVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDS 766
Query: 893 GKEPNRNLDDEDDKL-------------RVQLILQSGDLIP-----------PTHITKN- 952
+ N+N ++ K+ +Q + S + H+ ++
Sbjct: 767 KESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESK 826
Query: 953 ---NPSSFIIGDIHS----------------EIITRKKERKDYAKMVSNVCYTSSLEPTT 1012
NP+ + EII R+ ER +S +SL
Sbjct: 827 GSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVV 886
Query: 1013 ISAAL----------------SDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWI 1072
++A W A+ EL K N W + +P NI+ ++W+
Sbjct: 887 LNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWV 946
Query: 1073 FKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQ 1132
F K +E G IR + R +LS K+ Q
Sbjct: 947 FSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQ 1006
Query: 1133 MDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQ 1192
MDVK+ FLNG L EE+Y+ P+G + D+V KL KA+YGLKQA R W+E L +
Sbjct: 1007 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1066
Query: 1193 QGYQRGSADQTMFIYRQG--TDFLIVQIYVDDIL-----------FGGTSSGEFEMSMVG 1252
+ S D+ ++I +G + + V +YVDD++ F +F M+ +
Sbjct: 1067 CEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLN 1126
Query: 1253 ELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVD 1312
E+ F+ +I+ + I+ SQ Y K ++SKF M+ + TP + + + E +
Sbjct: 1127 EIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN 1186
Query: 1313 TNLYRSIIGSLLY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIW 1317
T RS+IG L+Y + +RPD+ AV + +RY + + KR+L+Y+ GT + +
Sbjct: 1187 TPC-RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLI 1246
BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 297.4 bits (760), Expect = 8.2e-79
Identity = 186/534 (34.83%), Postives = 276/534 (51.69%), Query Frame = 0
Query: 843 TRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM-P 902
TR K+ RK K ++ EP T A+ D+ W AM E+ N W+L+ P
Sbjct: 914 TRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPP 973
Query: 903 KPPYANIIGTKWIFKNKMDEEG-------RVIRK---------------------TIRLL 962
PP I+G +WIF K + +G R++ K +IR++
Sbjct: 974 PPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIV 1033
Query: 963 LSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAP 1022
L A R + + Q+DV + FL G L +EVY++QP GFVD D+V +LRKA+YGLKQAP
Sbjct: 1034 LGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAP 1093
Query: 1023 RAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS---------- 1082
RAWY L TYLL G+ +D ++F+ ++G + + +YVDDIL G
Sbjct: 1094 RAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDA 1153
Query: 1083 -SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLK 1142
S F + +L +FL + K+ G+ SQ +Y +L+++ M A+ TP AT K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213
Query: 1143 MTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKY 1202
+T + + D YR I+GSL YL +RPD+++AV ++Y P H + KR+L+Y
Sbjct: 1214 LTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRY 1273
Query: 1203 ISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQNSYY 1262
++GT ++GI+ T +L DADWAG TDD ST+G +LG++ + SKKQ
Sbjct: 1274 LAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVV 1333
Query: 1263 ---------------SQLLWMKQMLDEYRITQS-SMILYCDYLSAISISKNPVQHSLTKH 1319
S+L W+ +L E I S ++YCD + A + NPV HS KH
Sbjct: 1334 RSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKH 1393
BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 293.5 bits (750), Expect = 1.2e-77
Identity = 182/518 (35.14%), Postives = 270/518 (52.12%), Query Frame = 0
Query: 858 VCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPP-YANIIGTKWIFKNK 917
V + EP T AL DE W AM E+ N W+L+P PP + I+G +WIF K
Sbjct: 948 VSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKK 1007
Query: 918 MDEEG-------RVIRK---------------------TIRLLLSYACFRRFKLFQMDVK 977
+ +G R++ K +IR++L A R + + Q+DV
Sbjct: 1008 YNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVN 1067
Query: 978 SVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQ 1037
+ FL G L ++VY++QP GF+D ++V KLRKALYGLKQAPRAWY L YLL G+
Sbjct: 1068 NAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFV 1127
Query: 1038 RGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS-----------SGEFEMSMVGELTFFL 1097
+D ++F+ ++G + + +YVDDIL G S F + EL +FL
Sbjct: 1128 NSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFL 1187
Query: 1098 RFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRS 1157
+ K+ G+ SQ +Y +L+++ M A+ TP A K++ + + D YR
Sbjct: 1188 GIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRG 1247
Query: 1158 IIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTG 1217
I+GSL YL +RPDI++AV +++ P HL KRIL+Y++GT N+GI+ T
Sbjct: 1248 IVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTL 1307
Query: 1218 TLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQNSYY---------------SQ 1277
+L DADWAG DD ST+G +LG++ + SKKQ S+
Sbjct: 1308 SLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSE 1367
Query: 1278 LLWMKQMLDE--YRITQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANI 1319
+ W+ +L E R+T+ ++YCD + A + NPV HS KHI I +HF R V++
Sbjct: 1368 MQWICSLLTELGIRLTRPP-VIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGA 1427
BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 1.9e-27
Identity = 71/198 (35.86%), Postives = 111/198 (56.06%), Query Frame = 0
Query: 1030 IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKN 1089
+YVDDIL G+S S F M +G + +FL QIK G+F SQ KYA+
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 1090 LISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGV 1149
+++ GM + TP L + T + D + +RSI+G+L YLT +RPDI++AV +
Sbjct: 65 ILNNAGMLDCKPMSTPLPLKLNSSVST-AKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124
Query: 1150 CARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTS 1209
+ +P + KR+L+Y+ GT +G++ ++ + D+DWAGCT R+ST+
Sbjct: 125 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 184
Query: 1210 GGCFFLGNNVTACFSKKQ 1217
G C FLG N+ + +K+Q
Sbjct: 185 GFCTFLGCNIISWSAKRQ 201
BLAST of Pay0004819 vs. ExPASy TrEMBL
Match:
A0A5A7V046 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001550 PE=4 SV=1)
HSP 1 Score: 1452.2 bits (3758), Expect = 0.0e+00
Identity = 822/1251 (65.71%), Postives = 868/1251 (69.38%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
MD IRE NSTSRP LLDG NYGYWKS+M+AFLMSL+MR
Sbjct: 1 MDGIREENSTSRPLLLDGGNYGYWKSRMKAFLMSLDMR---------------------- 60
Query: 61 RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILE--------- 120
+EDDA +GNSR LNAL NVV+PNIFKLINTCKSAKA WDILE
Sbjct: 61 ---------NEDDAALGNSRALNALVNVVDPNIFKLINTCKSAKATWDILEVAFKGTSKV 120
Query: 121 -------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPF 180
ILTS+FEALQMGE ETI EFNV VLDIANESDALGEKM DSKLVRKVLRSLP
Sbjct: 121 KISRRLQILTSRFEALQMGEGETIAEFNVRVLDIANESDALGEKMSDSKLVRKVLRSLPS 180
Query: 181 KFNMKVTAIKEANDLSKMKLDELFG----------------------------------- 240
KFNMKVTAI+EANDLSKMKLDELFG
Sbjct: 181 KFNMKVTAIEEANDLSKMKLDELFGSLRAFEIHLGHTTSRRKLGLALTSVAKLKNQFHKH 240
Query: 241 --------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH 300
Q RISDTSSSGH RKKEHERGK +ASKSDK+GKGIRCHECEGFGH
Sbjct: 241 MGSQRNNREDQTLRQLRISDTSSSGHCRKKEHERGKEIKASKSDKYGKGIRCHECEGFGH 300
Query: 301 IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNN 360
IQ ECATYLKRKKKGMVAT SDEEDYSESDDEDLGMALIS+CTMNDEENVQTHDQ +S N
Sbjct: 301 IQAECATYLKRKKKGMVATFSDEEDYSESDDEDLGMALISVCTMNDEENVQTHDQLESKN 360
Query: 361 STEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFAR 420
T D +R K +DQEVILQQQERIQDLVEENQSFLSSIVTLKEELA+TKHQFEELLKFAR
Sbjct: 361 LTNDTANR-KIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAKTKHQFEELLKFAR 420
Query: 421 MPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEI 480
M T GTSKLDDILDQG RADDKRGL F ERDTP G+GTEI
Sbjct: 421 MLTKGTSKLDDILDQGMRADDKRGLRFAERDTPVRKTVFIREGTLQNSPTNNEQGKGTEI 480
Query: 481 SRMSMKSLNKRTRRIC------------------YFCGWYFDSGCCRHMTGNADFFSDLI 540
+ M K L C WYFDSGC RHMTGNADFFS+L
Sbjct: 481 TSMPTKHLRSPRTEWCRKIHIENCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELS 540
Query: 541 ECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI 600
ECKVG VVF DGGKGKIIGKGTIN GLPFLL+VRL+QGLAANLISISQLCD+ + VS
Sbjct: 541 ECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQ-VSF 600
Query: 601 KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISK 660
D DA+VTLCNLSKVEEA LWHKRLG LSG+TISK
Sbjct: 601 NKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLSGATISK 660
Query: 661 VTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTK 720
VTK DAII LPPL+F SLE CSEC GKQVKSVHKPVNI+STSHILELLHIDLMGPMQT+
Sbjct: 661 VTKVDAIIGLPPLTFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTE 720
Query: 721 SLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREF 780
SLGRK VVCVDDFSRYTWIK + KP + + +EKNTGIG+IQTD+G EF
Sbjct: 721 SLGRKWYAVVCVDDFSRYTWIKFILDKPETFKTCQTLFTQLQREKNTGIGQIQTDHGHEF 780
Query: 781 ENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALN 840
ENQHFAEF DNEGIFHEFSAPL QQN V EALN
Sbjct: 781 ENQHFAEFCDNEGIFHEFSAPLTLQQNGV--------------------------AEALN 840
Query: 841 TACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI 900
TACHIHNRVILR GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRR WDSKSD GI
Sbjct: 841 TACHIHNRVILRPGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRKWDSKSDRGI 900
Query: 901 FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQL 960
FLGY ANSRAYRVYNQ SK VMESINVIIDDL + P R L R+ +
Sbjct: 901 FLGYLANSRAYRVYNQCSKIVMESINVIIDDLDEGELESPARTNETTYLPSHLGLSRIDM 960
Query: 961 ILQSG---------------------------------DLIPPTHITKNNPSSFIIGDIH 1020
S DLIPPTH KN+PSSFII DIH
Sbjct: 961 STPSTSAIHCNTHESEAIVSASQHTPEQTAGATDSSKCDLIPPTHTAKNHPSSFIIRDIH 1020
Query: 1021 SEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM 1042
S IITRKKERKDYAKMV+NVCYTS LEPTT+SAALSDEHWIL +QEELLQF+RNQVWEL+
Sbjct: 1021 SGIITRKKERKDYAKMVANVCYTSLLEPTTVSAALSDEHWILTIQEELLQFERNQVWELV 1080
BLAST of Pay0004819 vs. ExPASy TrEMBL
Match:
A0A5D3C778 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00750 PE=4 SV=1)
HSP 1 Score: 1280.4 bits (3312), Expect = 0.0e+00
Identity = 677/823 (82.26%), Postives = 697/823 (84.69%), Query Frame = 0
Query: 122 MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 181
MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK
Sbjct: 1 MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 60
Query: 182 MKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 241
MKLDELFG S +D +GHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA
Sbjct: 61 MKLDELFGISSYAD--KTGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 120
Query: 242 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 301
TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE
Sbjct: 121 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 180
Query: 302 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 361
DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT
Sbjct: 181 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 240
Query: 362 SKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC 421
SKLDDILDQGRRADDKRGLGFTERDTP ++ +S N+ T + +
Sbjct: 241 SKLDDILDQGRRADDKRGLGFTERDTPATRYSTDQIPEESHNRMTPKKPH---------- 300
Query: 422 CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 481
R + GNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI
Sbjct: 301 -RKLQGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 360
Query: 482 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 541
SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL
Sbjct: 361 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 420
Query: 542 PPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVV 601
PPLSFSSLERCSECPVGKQVKSVHKP
Sbjct: 421 PPLSFSSLERCSECPVGKQVKSVHKPKP-------------------------------- 480
Query: 602 CVDDFSRYTWIKHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 661
+HVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP
Sbjct: 481 ----------SRHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 540
Query: 662 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 721
LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Sbjct: 541 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 600
Query: 722 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 781
LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV
Sbjct: 601 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 660
Query: 782 MESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPPT----HITKNNPSSFIIGDI 841
MESINVIIDDLG+ + +E L L D+ + H + + +
Sbjct: 661 MESINVIIDDLGELESTARTNETTYLPSHLGSSRSDMSTSSTSAIHTDTHESEASVSASQ 720
Query: 842 HS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 901
H+ EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE
Sbjct: 721 HTLEQTAGATDSSKCEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 768
Query: 902 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKT 928
ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRK+
Sbjct: 781 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKS 768
BLAST of Pay0004819 vs. ExPASy TrEMBL
Match:
Q84VI4 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)
HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 705/1580 (44.62%), Postives = 912/1580 (57.72%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D +
Sbjct: 1 MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60
Query: 61 --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
K E WTK+ED+ +GNS+ LNALFN V+ NIF+LINTC AK AW+IL+I
Sbjct: 61 DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120
Query: 121 ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP
Sbjct: 121 KVKISRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180
Query: 181 FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
+F+MKVTAI+EA D+ M++DEL G + +D Y
Sbjct: 181 KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240
Query: 241 ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
R+K H + + K K+ KGI
Sbjct: 241 LNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKKSDVKPSHSKGI 300
Query: 301 RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMND 360
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I +D
Sbjct: 301 QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIFETAEDSSD 360
Query: 361 EENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLK 420
++ T D+ ++ RK E ILQQ+ + I DL E ++ I LK
Sbjct: 361 TDSEITFDELATSY-------RKLCIKSEKILQQEAQLKKVIADLEAEKEAHKEEISELK 420
Query: 421 EELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TP 480
E+ + E + K +M G+ LD++L G+ A ++RGLGF + P
Sbjct: 421 GEVGFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTMTEFVP 480
Query: 481 GRGTEISRMS---------MKSLNKRTRRICYFCG------------------------- 540
+ + MS + +KR + C++CG
Sbjct: 481 AKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQSSNSRK 540
Query: 541 --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
WY DSGC RHMTG +F ++ C V F DG
Sbjct: 541 KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600
Query: 601 GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++
Sbjct: 601 SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660
Query: 661 TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
L C SK +E +WH+R G L + K+ A+
Sbjct: 661 VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720
Query: 721 LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
+P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR
Sbjct: 721 IPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780
Query: 781 VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
V VDDFSR+TW+K + K SL +EK+ I RI++D+GREFEN EF
Sbjct: 781 VVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFC 840
Query: 841 DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
+EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Sbjct: 841 TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900
Query: 901 ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSR
Sbjct: 901 TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960
Query: 961 AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
AYRV+N ++TVMESINV++DDL ++++++ D
Sbjct: 961 AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENSDSATD 1020
Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
+ + D T I K +P IIGD + + TR +E ++VSN C+ S +EP +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080
Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
AL+DE WI AMQEEL QFKRN+VWEL+P+P N+IGTKWIFKNK +EEG + R
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140
Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200
Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ +
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260
Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
+ +I QIYVDDI+FGG S+ EFEMS+VGELT+FL Q+KQ IF
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320
BLAST of Pay0004819 vs. ExPASy TrEMBL
Match:
Q84VH6 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)
HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 701/1578 (44.42%), Postives = 914/1578 (57.92%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D +
Sbjct: 1 MNMEKEGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60
Query: 61 R--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDI--------- 120
K E WTK+ED+ +GNS+ LNALFN V+ NIF+LINTC AK AW+I
Sbjct: 61 NELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTS 120
Query: 121 ------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
L++L ++FE L+M E+E I +F++ +L+IAN ALGE+M D KLVRK+LRSLP
Sbjct: 121 KVKMSRLQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLP 180
Query: 181 FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
+F+MKVTAI+EA D+ M++DEL G + +D Y
Sbjct: 181 KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSNDEGEEDEYD 240
Query: 241 ---------------------------RKKEHERG------KGTE-ASKSDK---FGKGI 300
R+K H R KG+E KSD+ KGI
Sbjct: 241 LDTDEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPSHSKGI 300
Query: 301 RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
+C CEG+GHI+ EC T+LK+++KG+ SD+ + + D D + ++ + E++
Sbjct: 301 QCRGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESAEDSS 360
Query: 361 QTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEELA 420
T + + R+ E ILQQ+ + I +L E ++ I LK E+
Sbjct: 361 DTDSEITFDELA--IFYRELCIKSEKILQQEAQLKKVIANLEAEKEAHEEEISKLKGEVG 420
Query: 421 ETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGT 480
+ E + K +M G+ LD++L G++ ++RGLGF + P + +
Sbjct: 421 FLNSKLENMTKSIKMLNKGSDMLDZVLQLGKKVGNQRGLGFNHKSAGRTTMTEFVPAKNS 480
Query: 481 EISRMS---------MKSLNKRTRRICYFCG----------------------------- 540
+ MS + +KR + C++CG
Sbjct: 481 TGATMSQHRSRHHGTQQKRSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQGSSSGRKM 540
Query: 541 ------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK 600
WY DSGC RHMTG +F ++ C V F DG K
Sbjct: 541 MWVPKHKIVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSK 600
Query: 601 GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL 660
GKI G G + GLP L V L++GL NLISISQLCD+ KS + ++ L
Sbjct: 601 GKITGMGKLVHEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVL 660
Query: 661 -----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLP 720
C SK +E +WH+R G L + K+ A+ +P
Sbjct: 661 MKGSRSKDNCYLWTPQESSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIP 720
Query: 721 PLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVC 780
L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V
Sbjct: 721 NLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVV 780
Query: 781 VDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDN 840
VDDFSR+TW+ + K SL +EK+ I RI++D+GREFEN F EF +
Sbjct: 781 VDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTS 840
Query: 841 EGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL 900
EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV L
Sbjct: 841 EGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTL 900
Query: 901 RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAY 960
R GT TT YE+WKGRKP VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAY
Sbjct: 901 RRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAY 960
Query: 961 RVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRVQL 1020
RV+N ++TVMESINV++DDL ++++++ D +
Sbjct: 961 RVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEP 1020
Query: 1021 ILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISA 1080
+ D P I K +P IIGD + + TR +E ++VSN C+ S +EP +
Sbjct: 1021 NINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSRE----IEIVSNSCFVSKIEPKNVKE 1080
Query: 1081 ALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR------ 1140
AL+DE WI AMQEEL QFKRN+VWEL+P+P N+IGTKWIFKNK +EEG + R
Sbjct: 1081 ALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLV 1140
Query: 1141 ----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA 1200
++IRLLL AC +FKL+QMDVKS FLNGYL EE YV
Sbjct: 1141 AQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVE 1200
Query: 1201 QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGT 1260
QPKGFVDP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ +
Sbjct: 1201 QPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAE 1260
Query: 1261 DFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFFSQ 1316
+ +I QIYVDDI+FGG S+ EFEMS+VGELT+FL Q+KQ IF SQ
Sbjct: 1261 NLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQ 1320
BLAST of Pay0004819 vs. ExPASy TrEMBL
Match:
Q84VH8 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)
HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 706/1580 (44.68%), Postives = 913/1580 (57.78%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D +
Sbjct: 1 MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60
Query: 61 --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
K E WTK+ED+ +GNS+ LNALFN V+ NIF+LINTC AK AW+IL+I
Sbjct: 61 DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120
Query: 121 ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP
Sbjct: 121 KVKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180
Query: 181 FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
+F+MKVTAI+EA D+ M++DEL G + +D Y
Sbjct: 181 KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240
Query: 241 ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
R+K H + + K K+ KGI
Sbjct: 241 LDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPSHSKGI 300
Query: 301 RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I E
Sbjct: 301 QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIF-----ETA 360
Query: 361 QTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEE 420
+ S + ++ A RK E ILQQ+ + I DL E ++ I LK E
Sbjct: 361 EDSSDTDSEITFDELAASYRKLCIKSEKILQQEAQLKKVIADLEAEKEAHEEEISELKGE 420
Query: 421 LAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR 480
+ + E + K +M G+ LD++L G+ A ++RGLGF + P +
Sbjct: 421 VGFLNSKLETMKKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKFAGRTTMTEFVPAK 480
Query: 481 ---GTEISRM------SMKSLNKRTRRICYFCG--------------------------- 540
GT +S+ + + +KR + C++CG
Sbjct: 481 NRTGTTMSQHLSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRK 540
Query: 541 --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
WY DSGC RHMTG +F ++ C V F DG
Sbjct: 541 KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600
Query: 601 GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++
Sbjct: 601 SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660
Query: 661 TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
L C SK +E +WH+R G L + K+ A+
Sbjct: 661 VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720
Query: 721 LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
+P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR
Sbjct: 721 IPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780
Query: 781 VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
V VDDFSR+TW+ + K SL +EK+ I RI++D+GREFEN F EF
Sbjct: 781 VVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFC 840
Query: 841 DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
+EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Sbjct: 841 TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900
Query: 901 ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSR
Sbjct: 901 TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960
Query: 961 AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
AYRV+N ++TVMESINV++DDL ++++++ D
Sbjct: 961 AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLGDNVADAAKSGENAENSDSATD 1020
Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
+ + D T I K +P IIGD + + TR +E ++VSN C+ S +EP +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080
Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
AL+DE WI AMQEEL QFKRN+VWEL+P+P N+IGTKWIFKNK +EEG + R
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140
Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200
Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ +
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260
Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
+ +I QIYVDDI+FGG S+ EFEMS+VGELT+FL Q+KQ IF
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320
BLAST of Pay0004819 vs. NCBI nr
Match:
KAA0059225.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 1452.2 bits (3758), Expect = 0.0e+00
Identity = 822/1251 (65.71%), Postives = 868/1251 (69.38%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
MD IRE NSTSRP LLDG NYGYWKS+M+AFLMSL+MR
Sbjct: 1 MDGIREENSTSRPLLLDGGNYGYWKSRMKAFLMSLDMR---------------------- 60
Query: 61 RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILE--------- 120
+EDDA +GNSR LNAL NVV+PNIFKLINTCKSAKA WDILE
Sbjct: 61 ---------NEDDAALGNSRALNALVNVVDPNIFKLINTCKSAKATWDILEVAFKGTSKV 120
Query: 121 -------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPF 180
ILTS+FEALQMGE ETI EFNV VLDIANESDALGEKM DSKLVRKVLRSLP
Sbjct: 121 KISRRLQILTSRFEALQMGEGETIAEFNVRVLDIANESDALGEKMSDSKLVRKVLRSLPS 180
Query: 181 KFNMKVTAIKEANDLSKMKLDELFG----------------------------------- 240
KFNMKVTAI+EANDLSKMKLDELFG
Sbjct: 181 KFNMKVTAIEEANDLSKMKLDELFGSLRAFEIHLGHTTSRRKLGLALTSVAKLKNQFHKH 240
Query: 241 --------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH 300
Q RISDTSSSGH RKKEHERGK +ASKSDK+GKGIRCHECEGFGH
Sbjct: 241 MGSQRNNREDQTLRQLRISDTSSSGHCRKKEHERGKEIKASKSDKYGKGIRCHECEGFGH 300
Query: 301 IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNN 360
IQ ECATYLKRKKKGMVAT SDEEDYSESDDEDLGMALIS+CTMNDEENVQTHDQ +S N
Sbjct: 301 IQAECATYLKRKKKGMVATFSDEEDYSESDDEDLGMALISVCTMNDEENVQTHDQLESKN 360
Query: 361 STEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFAR 420
T D +R K +DQEVILQQQERIQDLVEENQSFLSSIVTLKEELA+TKHQFEELLKFAR
Sbjct: 361 LTNDTANR-KIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAKTKHQFEELLKFAR 420
Query: 421 MPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEI 480
M T GTSKLDDILDQG RADDKRGL F ERDTP G+GTEI
Sbjct: 421 MLTKGTSKLDDILDQGMRADDKRGLRFAERDTPVRKTVFIREGTLQNSPTNNEQGKGTEI 480
Query: 481 SRMSMKSLNKRTRRIC------------------YFCGWYFDSGCCRHMTGNADFFSDLI 540
+ M K L C WYFDSGC RHMTGNADFFS+L
Sbjct: 481 TSMPTKHLRSPRTEWCRKIHIENCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELS 540
Query: 541 ECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI 600
ECKVG VVF DGGKGKIIGKGTIN GLPFLL+VRL+QGLAANLISISQLCD+ + VS
Sbjct: 541 ECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQ-VSF 600
Query: 601 KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISK 660
D DA+VTLCNLSKVEEA LWHKRLG LSG+TISK
Sbjct: 601 NKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLSGATISK 660
Query: 661 VTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTK 720
VTK DAII LPPL+F SLE CSEC GKQVKSVHKPVNI+STSHILELLHIDLMGPMQT+
Sbjct: 661 VTKVDAIIGLPPLTFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTE 720
Query: 721 SLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREF 780
SLGRK VVCVDDFSRYTWIK + KP + + +EKNTGIG+IQTD+G EF
Sbjct: 721 SLGRKWYAVVCVDDFSRYTWIKFILDKPETFKTCQTLFTQLQREKNTGIGQIQTDHGHEF 780
Query: 781 ENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALN 840
ENQHFAEF DNEGIFHEFSAPL QQN V EALN
Sbjct: 781 ENQHFAEFCDNEGIFHEFSAPLTLQQNGV--------------------------AEALN 840
Query: 841 TACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI 900
TACHIHNRVILR GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRR WDSKSD GI
Sbjct: 841 TACHIHNRVILRPGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRKWDSKSDRGI 900
Query: 901 FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQL 960
FLGY ANSRAYRVYNQ SK VMESINVIIDDL + P R L R+ +
Sbjct: 901 FLGYLANSRAYRVYNQCSKIVMESINVIIDDLDEGELESPARTNETTYLPSHLGLSRIDM 960
Query: 961 ILQSG---------------------------------DLIPPTHITKNNPSSFIIGDIH 1020
S DLIPPTH KN+PSSFII DIH
Sbjct: 961 STPSTSAIHCNTHESEAIVSASQHTPEQTAGATDSSKCDLIPPTHTAKNHPSSFIIRDIH 1020
Query: 1021 SEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM 1042
S IITRKKERKDYAKMV+NVCYTS LEPTT+SAALSDEHWIL +QEELLQF+RNQVWEL+
Sbjct: 1021 SGIITRKKERKDYAKMVANVCYTSLLEPTTVSAALSDEHWILTIQEELLQFERNQVWELV 1080
BLAST of Pay0004819 vs. NCBI nr
Match:
TYK07190.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 1280.4 bits (3312), Expect = 0.0e+00
Identity = 677/823 (82.26%), Postives = 697/823 (84.69%), Query Frame = 0
Query: 122 MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 181
MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK
Sbjct: 1 MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 60
Query: 182 MKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 241
MKLDELFG S +D +GHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA
Sbjct: 61 MKLDELFGISSYAD--KTGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 120
Query: 242 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 301
TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE
Sbjct: 121 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 180
Query: 302 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 361
DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT
Sbjct: 181 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 240
Query: 362 SKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC 421
SKLDDILDQGRRADDKRGLGFTERDTP ++ +S N+ T + +
Sbjct: 241 SKLDDILDQGRRADDKRGLGFTERDTPATRYSTDQIPEESHNRMTPKKPH---------- 300
Query: 422 CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 481
R + GNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI
Sbjct: 301 -RKLQGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 360
Query: 482 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 541
SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL
Sbjct: 361 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 420
Query: 542 PPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVV 601
PPLSFSSLERCSECPVGKQVKSVHKP
Sbjct: 421 PPLSFSSLERCSECPVGKQVKSVHKPKP-------------------------------- 480
Query: 602 CVDDFSRYTWIKHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 661
+HVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP
Sbjct: 481 ----------SRHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 540
Query: 662 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 721
LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Sbjct: 541 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 600
Query: 722 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 781
LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV
Sbjct: 601 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 660
Query: 782 MESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPPT----HITKNNPSSFIIGDI 841
MESINVIIDDLG+ + +E L L D+ + H + + +
Sbjct: 661 MESINVIIDDLGELESTARTNETTYLPSHLGSSRSDMSTSSTSAIHTDTHESEASVSASQ 720
Query: 842 HS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 901
H+ EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE
Sbjct: 721 HTLEQTAGATDSSKCEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 768
Query: 902 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKT 928
ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRK+
Sbjct: 781 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKS 768
BLAST of Pay0004819 vs. NCBI nr
Match:
AAO73521.1 (gag-pol polyprotein [Glycine max])
HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 705/1580 (44.62%), Postives = 912/1580 (57.72%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D +
Sbjct: 1 MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60
Query: 61 --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
K E WTK+ED+ +GNS+ LNALFN V+ NIF+LINTC AK AW+IL+I
Sbjct: 61 DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120
Query: 121 ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP
Sbjct: 121 KVKISRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180
Query: 181 FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
+F+MKVTAI+EA D+ M++DEL G + +D Y
Sbjct: 181 KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240
Query: 241 ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
R+K H + + K K+ KGI
Sbjct: 241 LNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKKSDVKPSHSKGI 300
Query: 301 RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMND 360
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I +D
Sbjct: 301 QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIFETAEDSSD 360
Query: 361 EENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLK 420
++ T D+ ++ RK E ILQQ+ + I DL E ++ I LK
Sbjct: 361 TDSEITFDELATSY-------RKLCIKSEKILQQEAQLKKVIADLEAEKEAHKEEISELK 420
Query: 421 EELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TP 480
E+ + E + K +M G+ LD++L G+ A ++RGLGF + P
Sbjct: 421 GEVGFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTMTEFVP 480
Query: 481 GRGTEISRMS---------MKSLNKRTRRICYFCG------------------------- 540
+ + MS + +KR + C++CG
Sbjct: 481 AKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQSSNSRK 540
Query: 541 --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
WY DSGC RHMTG +F ++ C V F DG
Sbjct: 541 KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600
Query: 601 GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++
Sbjct: 601 SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660
Query: 661 TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
L C SK +E +WH+R G L + K+ A+
Sbjct: 661 VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720
Query: 721 LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
+P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR
Sbjct: 721 IPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780
Query: 781 VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
V VDDFSR+TW+K + K SL +EK+ I RI++D+GREFEN EF
Sbjct: 781 VVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFC 840
Query: 841 DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
+EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Sbjct: 841 TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900
Query: 901 ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSR
Sbjct: 901 TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960
Query: 961 AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
AYRV+N ++TVMESINV++DDL ++++++ D
Sbjct: 961 AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENSDSATD 1020
Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
+ + D T I K +P IIGD + + TR +E ++VSN C+ S +EP +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080
Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
AL+DE WI AMQEEL QFKRN+VWEL+P+P N+IGTKWIFKNK +EEG + R
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140
Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200
Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ +
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260
Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
+ +I QIYVDDI+FGG S+ EFEMS+VGELT+FL Q+KQ IF
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320
BLAST of Pay0004819 vs. NCBI nr
Match:
AAO73529.1 (gag-pol polyprotein [Glycine max])
HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 701/1578 (44.42%), Postives = 914/1578 (57.92%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D +
Sbjct: 1 MNMEKEGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60
Query: 61 R--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDI--------- 120
K E WTK+ED+ +GNS+ LNALFN V+ NIF+LINTC AK AW+I
Sbjct: 61 NELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTS 120
Query: 121 ------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
L++L ++FE L+M E+E I +F++ +L+IAN ALGE+M D KLVRK+LRSLP
Sbjct: 121 KVKMSRLQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLP 180
Query: 181 FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
+F+MKVTAI+EA D+ M++DEL G + +D Y
Sbjct: 181 KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSNDEGEEDEYD 240
Query: 241 ---------------------------RKKEHERG------KGTE-ASKSDK---FGKGI 300
R+K H R KG+E KSD+ KGI
Sbjct: 241 LDTDEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPSHSKGI 300
Query: 301 RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
+C CEG+GHI+ EC T+LK+++KG+ SD+ + + D D + ++ + E++
Sbjct: 301 QCRGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESAEDSS 360
Query: 361 QTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEELA 420
T + + R+ E ILQQ+ + I +L E ++ I LK E+
Sbjct: 361 DTDSEITFDELA--IFYRELCIKSEKILQQEAQLKKVIANLEAEKEAHEEEISKLKGEVG 420
Query: 421 ETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGT 480
+ E + K +M G+ LD++L G++ ++RGLGF + P + +
Sbjct: 421 FLNSKLENMTKSIKMLNKGSDMLDZVLQLGKKVGNQRGLGFNHKSAGRTTMTEFVPAKNS 480
Query: 481 EISRMS---------MKSLNKRTRRICYFCG----------------------------- 540
+ MS + +KR + C++CG
Sbjct: 481 TGATMSQHRSRHHGTQQKRSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQGSSSGRKM 540
Query: 541 ------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK 600
WY DSGC RHMTG +F ++ C V F DG K
Sbjct: 541 MWVPKHKIVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSK 600
Query: 601 GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL 660
GKI G G + GLP L V L++GL NLISISQLCD+ KS + ++ L
Sbjct: 601 GKITGMGKLVHEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVL 660
Query: 661 -----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLP 720
C SK +E +WH+R G L + K+ A+ +P
Sbjct: 661 MKGSRSKDNCYLWTPQESSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIP 720
Query: 721 PLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVC 780
L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V
Sbjct: 721 NLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVV 780
Query: 781 VDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDN 840
VDDFSR+TW+ + K SL +EK+ I RI++D+GREFEN F EF +
Sbjct: 781 VDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTS 840
Query: 841 EGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL 900
EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV L
Sbjct: 841 EGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTL 900
Query: 901 RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAY 960
R GT TT YE+WKGRKP VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAY
Sbjct: 901 RRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAY 960
Query: 961 RVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRVQL 1020
RV+N ++TVMESINV++DDL ++++++ D +
Sbjct: 961 RVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEP 1020
Query: 1021 ILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISA 1080
+ D P I K +P IIGD + + TR +E ++VSN C+ S +EP +
Sbjct: 1021 NINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSRE----IEIVSNSCFVSKIEPKNVKE 1080
Query: 1081 ALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR------ 1140
AL+DE WI AMQEEL QFKRN+VWEL+P+P N+IGTKWIFKNK +EEG + R
Sbjct: 1081 ALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLV 1140
Query: 1141 ----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA 1200
++IRLLL AC +FKL+QMDVKS FLNGYL EE YV
Sbjct: 1141 AQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVE 1200
Query: 1201 QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGT 1260
QPKGFVDP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ +
Sbjct: 1201 QPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAE 1260
Query: 1261 DFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFFSQ 1316
+ +I QIYVDDI+FGG S+ EFEMS+VGELT+FL Q+KQ IF SQ
Sbjct: 1261 NLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQ 1320
BLAST of Pay0004819 vs. NCBI nr
Match:
AAO73527.1 (gag-pol polyprotein [Glycine max])
HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 706/1580 (44.68%), Postives = 913/1580 (57.78%), Query Frame = 0
Query: 1 MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D +
Sbjct: 1 MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60
Query: 61 --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
K E WTK+ED+ +GNS+ LNALFN V+ NIF+LINTC AK AW+IL+I
Sbjct: 61 DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120
Query: 121 ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP
Sbjct: 121 KVKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180
Query: 181 FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
+F+MKVTAI+EA D+ M++DEL G + +D Y
Sbjct: 181 KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240
Query: 241 ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
R+K H + + K K+ KGI
Sbjct: 241 LDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPSHSKGI 300
Query: 301 RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I E
Sbjct: 301 QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIF-----ETA 360
Query: 361 QTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEE 420
+ S + ++ A RK E ILQQ+ + I DL E ++ I LK E
Sbjct: 361 EDSSDTDSEITFDELAASYRKLCIKSEKILQQEAQLKKVIADLEAEKEAHEEEISELKGE 420
Query: 421 LAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR 480
+ + E + K +M G+ LD++L G+ A ++RGLGF + P +
Sbjct: 421 VGFLNSKLETMKKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKFAGRTTMTEFVPAK 480
Query: 481 ---GTEISRM------SMKSLNKRTRRICYFCG--------------------------- 540
GT +S+ + + +KR + C++CG
Sbjct: 481 NRTGTTMSQHLSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRK 540
Query: 541 --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
WY DSGC RHMTG +F ++ C V F DG
Sbjct: 541 KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600
Query: 601 GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++
Sbjct: 601 SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660
Query: 661 TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
L C SK +E +WH+R G L + K+ A+
Sbjct: 661 VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720
Query: 721 LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
+P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR
Sbjct: 721 IPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780
Query: 781 VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
V VDDFSR+TW+ + K SL +EK+ I RI++D+GREFEN F EF
Sbjct: 781 VVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFC 840
Query: 841 DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
+EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Sbjct: 841 TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900
Query: 901 ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSR
Sbjct: 901 TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960
Query: 961 AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
AYRV+N ++TVMESINV++DDL ++++++ D
Sbjct: 961 AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLGDNVADAAKSGENAENSDSATD 1020
Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
+ + D T I K +P IIGD + + TR +E ++VSN C+ S +EP +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080
Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
AL+DE WI AMQEEL QFKRN+VWEL+P+P N+IGTKWIFKNK +EEG + R
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140
Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200
Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ +
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260
Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
+ +I QIYVDDI+FGG S+ EFEMS+VGELT+FL Q+KQ IF
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320
BLAST of Pay0004819 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 226.1 bits (575), Expect = 1.7e-58
Identity = 151/504 (29.96%), Postives = 240/504 (47.62%), Query Frame = 0
Query: 830 SSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF 889
+S I DI S+ ++ +K Y + VC + EP+T + A W AM +E+
Sbjct: 53 ASLTIHDI-SQFLSYEKVSPLYHSFL--VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAM 112
Query: 890 KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR------------------------ 949
+ WE+ PP IG KW++K K + +G + R
Sbjct: 113 ETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSP 172
Query: 950 ----KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFV----DPVHQDHV 1009
+++L+L+ + F L Q+D+ + FLNG L EE+Y+ P G+ D + + V
Sbjct: 173 VCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAV 232
Query: 1010 YKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILF 1069
L+K++YGLKQA R W+ + S L+ G+ + +D T F+ T FL V +YVDDI+
Sbjct: 233 CYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIII 292
Query: 1070 GGTSSGE-----------FEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMD 1129
+ F++ +G L +FL +I + GI Q KYA +L+ + G+
Sbjct: 293 CSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLL 352
Query: 1130 KARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADP 1189
+ P + + + G+ VD YR +IG L+YL +R DI+FAV +++ P
Sbjct: 353 GCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 412
Query: 1190 RTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGN 1249
R +H +IL YI GT G++Y+ L DA + C D R+ST+G C FLG
Sbjct: 413 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGT 472
Query: 1250 NVTACFSKKQ---------------NSYYSQLLWMKQMLDEYRITQSS-MILYCDYLSAI 1275
++ + SKKQ + +++W+ Q E ++ S +L+CD +AI
Sbjct: 473 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 532
BLAST of Pay0004819 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 126.7 bits (317), Expect = 1.4e-28
Identity = 71/198 (35.86%), Postives = 111/198 (56.06%), Query Frame = 0
Query: 1030 IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKN 1089
+YVDDIL G+S S F M +G + +FL QIK G+F SQ KYA+
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 1090 LISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGV 1149
+++ GM + TP L + T + D + +RSI+G+L YLT +RPDI++AV +
Sbjct: 65 ILNNAGMLDCKPMSTPLPLKLNSSVST-AKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124
Query: 1150 CARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTS 1209
+ +P + KR+L+Y+ GT +G++ ++ + D+DWAGCT R+ST+
Sbjct: 125 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 184
Query: 1210 GGCFFLGNNVTACFSKKQ 1217
G C FLG N+ + +K+Q
Sbjct: 185 GFCTFLGCNIISWSAKRQ 201
BLAST of Pay0004819 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 65.9 bits (159), Expect = 2.9e-10
Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 0
Query: 1123 LYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGN 1182
+YLT +RPD+ FAV +++ + RT+ + ++L Y+ GT G++Y+ + L
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1183 YDADWAGCTDDRKSTSGGC-----FFLG 1206
D+DWA C D R+S +G C +FLG
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLVPLWFLG 88
BLAST of Pay0004819 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 65.5 bits (158), Expect = 3.7e-10
Identity = 36/93 (38.71%), Postives = 49/93 (52.69%), Query Frame = 0
Query: 841 IITRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM 900
++TR K K K + T EP ++ AL D W AMQEEL RN+ W L+
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60
Query: 901 PKPPYANIIGTKWIFKNKMDEEGRVIRKTIRLL 932
P P NI+G KW+FK K+ +G + R RL+
Sbjct: 61 PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLV 93
BLAST of Pay0004819 vs. TAIR 10
Match:
AT4G05360.1 (Zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 53.1 bits (126), Expect = 1.9e-06
Identity = 59/193 (30.57%), Postives = 84/193 (43.52%), Query Frame = 0
Query: 220 KFGKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTM 279
K KG RC EC+GF H+ +ECA +K K+K + +SD E +SDD + L++ T
Sbjct: 373 KSSKGKRCFECKGFRHMCSECANLMKEKEKKFI--MSDSE--IDSDDGEELKNLVAFTTF 432
Query: 280 NDEENVQTHDQPKSNNST----------EDAEDRKKTKDQEVILQQQERIQD-------- 339
+ P S ++T D ++ D ++ + +E ++
Sbjct: 433 ESSIASASASGPTSASATGSTSASATGPATGSDNDQSDDDDLSISDEEFAENYKALYEHC 492
Query: 340 --LVEENQSFLSS--------IVTLK--EELAETKHQFEELLKFARMPTNGTSKLDDILD 383
+VEEN + TLK E E Q EE K RM NGT KL IL
Sbjct: 493 VKVVEENSVLTKEKLKLEAKVVKTLKFAAEKEEEASQLEETQKNLRMLNNGTKKLGHILS 552
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 5.1e-97 | 27.58 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 5.3e-86 | 26.31 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 8.2e-79 | 34.83 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 1.2e-77 | 35.14 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P92519 | 1.9e-27 | 35.86 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V046 | 0.0e+00 | 65.71 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G... | [more] |
A0A5D3C778 | 0.0e+00 | 82.26 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G... | [more] |
Q84VI4 | 0.0e+00 | 44.62 | Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1 | [more] |
Q84VH6 | 0.0e+00 | 44.42 | Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1 | [more] |
Q84VH8 | 0.0e+00 | 44.68 | Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1 | [more] |