Pay0004819 (gene) Melon (Payzawat) v1

Overview
NamePay0004819
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag-pol polyprotein
Locationchr04: 18658048 .. 18662974 (+)
RNA-Seq ExpressionPay0004819
SyntenyPay0004819
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGTATCCGAGAAGGAAACTCAACTAGCAGACCTCCCCTTTTGGACGGAGAAAATTATGGCTACTGGAAGTCACAAATGGAAGCCTTCCTGATGTCACTCAACATGAGGAGTTGGAGAGCCGTTATATCCGGATGGGAGTATCCCACTGAAAAGGACGAAGCATGCCAAACTGTTCGAAAATCTGAGTTGAAATGGACAAAAGATGAAGATGATGCTCCTGTAGGCAACTCTCGTACACTGAATGCCTTGTTTAATGTCGTCAATCCTAACATATTCAAACTAATCAACACTTGTAAATCGGCCAAGGCTGCCTGGGATATCTTGGAAGTAGATTTTGAAGGAACCTCCAAAGTGAAAATATGACGGCTGCAGATCTTGACGTCTCAATTTGAAGCCCTTCAAATGGGTGAAGATGAGACTATAACCGAATTCAATGTCCCTGTCCTTGACATTGCCAACGAATCAGATGCACTCGGGGAAAAAATGTATGACTCCAAACTTGTTCGAAAGGTTCTCAGATCCCTGCCCTTCAAGTTTAACATGAAAGTCACAGCGATCAAAGAAGCTAATGACCTATCTAAAATGAAATTGGATGAACTATTTGGGTGACGAACATTCGAAATTCACTTGGGACACACGGCCAGCAGAAGAAAACGAGGACTAGCACTAATCTCAGTTAAGGAAGAGCCAATCAAGGAACACCGAGTGATGCAGGATAATGATGCTCTTACAGAATCAGTAGTTATGCTGACAAAACAGGTTGCGAAACTTAAAAACCAGTTTCACAAACTCATGGGAAACCAACGTGACAACAGAGAGGACTAGTCCTTAAGACAGTCAAGAATATCAGATACCTCCTCTTCAGGACACTATCGAAAGAAGGAACACGAACGAGGAAAAGGAACTGAAGCCTCGAAATCTGACAAATTTGGCAAAGGGATCAGGTGTCATGAATGTGAAGGATTTGGACATATCCAAACCGAGTGTGCTACTTATCTTAAACGCAAGAAAAAGGGTATGGTAGCTACCTTATCTGATGAAGAAGATTATTCCGAAAGCGACGATGAAGACCTTGGAATGGCCTTGATTAGTATCTGCACCATGAATGACGAAGAAAATGTTCAAACACATGACCAGCCGAAATCAAATAACTCAACTGAAGACGCAGAAGACAGAAAGAAGACAAAAGATCAAGAAGTTATCCTGCAACAACAAGAACGAATTCAAGATCTAGTGGAAGAGAACCAAAGCTTCCTATCCTCTATAGTAACTCTAAAAGAAGAACTAGCGGAAACCAAGCATCAATTCGAAGAACTCCTAAAATTTGCAAGGATGCCGACAAACGGAACCTCGAAACTAGATGACATACTCGACCAAGGAAGGAGGGCTGACGACAAAAGAGGCCTCGGATTTACAGAAAGGGACACACCTGTCAGAAAAACTGTTTTTATCCGAGAAAGTACCCCTCAAAACAGCCTTACAAATATTGAACAGGGAAGGGGCACTGAGATTTCTAGAATGTCTATGAAATCCCTAAACAAGCGAACACGTAGAATTTGTTATTTTTGTGGATGGGTTGGACATATTCATCAAAATTGCTTGAATTACCGACTACTCATGCACAGGCAACTCGATACTCGACAGACCAAATACCTGAGGAGTCCCATAACAGAATGACGCCGAAAAAGCCACATAGAAAACTGCAAGGTGGCTCTCACCTCTGTCAAAACCCCCAACTCCAGTGACTAGTACTTTGACAGTGGGTGTTGCAGACACATGACAGGTAATGCAGATTTCTTTTCTGATCTGATTGAATGTAAAGTCGGGTTAGTAGTATTTGAAGATGGAGGAAAAGGAAAAATAATTGGTAAAGGAACGATTAACCGTCTGGGTCTACCGTTTCTTCTTAATGTTCGACTATTACAAGGACTGGCTGCAAACCTCATAAGCATCAGCCAACTATGTGACAAGGCTATCAAGTCAGTTTCAATAAAGATAGATGTAATGTGTTAGATGGTCAAAATAGAATATTTTTCAGCGGAACAAGGCTGTCAGACAACTGCTATCACTAGGATGCAAAGGTGACCTTATGCAATTTATCAAAAGTAGAAGAAGCTGGACTCTGGCACAAACGACTTGGACAACTTAGTGGCTCTACTATCTCCAAGGTCACCAAAGCTGATGCCATCATCGATCTTCCCCCGCTATCATTCTCGTCACTAGAAAGATGTTCGGAGTGCCCAGTTGGCAAGCAAGTCAAGTCTGTGCACAAGCCTGTAAATATCGCCTCGACGTCCCATATTTTGGAACTTCTTCATATAGACCTAATGGGGCCCATGCAAACAAAAAGCTTGGGAAGAAAACGGTGTGTAGTAGTGTGTGTAGATGATTTCTCCCGCTACACCTGGATAAAGTTTATCCTTGACAAATCAGAAACCTTCAAGACATGTCAAACCCTATTCACTCAACTCCAAAGAGAAAAATACCGGTATTGGCCGAATACAAACTGATTATGGGCGTGAATTTGAGAATCAGCACTTTGCTGAGTTCTATGATAATGAAGGCATCTTTCATGAGTTCTCTGCTCCTTTAAAACCACAGCAAAATGTAGTTGTAGAGAGAAGGAACCGAACCTTACAGGAGATGGCCCGAGTGATGATTCATGCAAAGCACCTACCAATCCAATTCTGGGTGGAAGCTCTAAACACTGCATGCCATATACATAACAGAGTCATTCTCCGTTCAGGGACCACTACAACCTCATATGAGCTGTGGAAAGGGAGAAAACCAAATGTGAAGTATTTTCACATCTTTGGCAGCACGTGCTTTATCTTGAGTGATAGGGATCATCGTAGAAACTGGGACTCAAAGTCTGATCATGGAATATTTCTGGGATATTCTGCTAACAGCCGAGCCTACAGGGTCTACAACCAGAGTTCCAAAACAGTAATGGAATCCATTAACGTCATTATTGATGACCTTGGTAAGGAACCCAACAGAAATCTTGATGATGAAGATGAGTTTTTCTGAAATTCCCTTTCTCATAAACCTACTGAAGGAGAGTTAGAATCGACTGCCCGCACTAATGAAACAACATACTTACCCTCTCATCTCGGTTCAAGCAGAAGTGACATGTCAACATCTTCTACATCAGCCATTCATACTGACACACATGAAAGTGAAGCATCAGTATCTGCAAGTCAGCACACTCTAGAGCAAACTGCGGGTGCAACTGATTCTTCAAAGTGGTGACCTCATACCTCCTACGCATATAACCAAAAACAATCCCTCCAGCTTCATTATTGGAGATATTCACAGTGAAATCATAACTCGGAAGAAGGAGAGGAAAGATTATGCAAAAATGGTTTCCAATGTGTGCTACACATCTTCACTAGAACCAACCACGATCTCTGCAGCACTTTCCGATGAACACTGGATCTTGGCTATGCAGGAAGAGCTACTCCAGTTTAAAAGAAACCAAGTATGGGAATTAATGCCAAAGCCACCTTATGCTAACATAATTGGTACCAAATGGATCTTTAAGAACAAAATGGATGAAGAAGGTAGAGTTATCCGTAAAAGTTAGACTGGTTGCTCAAGGGTATTCTCAAATAGAAGGGTTGGATTTTGGAGAAACATTTGCCCCAGTTGCCAGATTATAAGCCATCCGACTACTGCTAAGCTACGCATGTTTTCGAAGGTTCAAACTGTTCCAAATGGATGTAAAGAGTGTGTTCCTAAATGGGTACTTATTTGAGGAAGTATATGTGGCCCAGCCAAAAGGATTTGTTGATCCAGTACATCAAGATCATGTTTACAAACTTCGAAAGGCACTCTATGGACTTAAACAAGCTCCTAGAGCTTGGTATGAGAGACTCTCCACTTACTTGTTACAACAAGGATATCAAAGGGGTAGTGCGGATCAAACTATGTTTATATATCGTCAAGGCACTGACTTTCTGATCGTTCAGATCTATGTTGACGACATTTTATTTGGTGGTACGTCCTCAGTCTATGTTGAATAGTTTGTTACCCAGATGAAGGGAGAATTTGAAATGAGCATGGTTGGGGAACTAACCTTCTTCCTGAGGTTTCAAATTAAGCAAGAAAATATAGGGATCTTTTTCTCTCAAGAAAAATATGCAAAAAACCTCATATCTAAGTTTGGTATGGATAAGGCCAGATCTAAAAGAACGCCCGCCGCTACATATCTGAAAATGACTAAGGACACAAATGGTGAAAGAGTTGATACAAACCTGTACCGAAGCATCATTGGGAGCTTGCTCTATTTAACAGCCAGCAGACCGGATATAGCCTTTGCAGTAGGAGTTTGTGCTCGGTATCAGGCTGACCCGCGCACGTCACATCTTCACTGTGCAAAACGAATACTCAAATATATATCAGGTACATTTAACTATGGTATTTGGTATACTTATGACACAACTGGTACTCTTGTTGGCAACTATGATGCAGACTGGGCAGGGTGCACAGATGATAGGAAGAGCACATCTGGAGGGTGCTTCTTCTTAGGGAATAATGTAACTGCTTGTTTCAGCAAGAAACAAAATAGTGTCTCCCTATCAACCGCCGAAGTTGAATACATTGCTGCAGGTAGTACTACTCTCAACTGTTGTGGATGAAACAAATGCTTGATGAATATAGGATAACTCAGTCTTCCATGATTCTCTACTGTGATTATCTGAGCGCAATAAGCATCTCCAAAAATCCAGTTCAACATAGTCTAACAAAGCACATAAATATCCGACATCACTTTACTCGAGAACTCGTTGAAGCCAATATTATAAGATTAGAACATGTTCAAAGTGCCTTTCAGCTAGCAGATATATTTACAAAGCCTCTGGATTTTGCAACATTTGAAGGACTGAGGGCCAGTGTTGGAGTCTGTCAACGGCCCACATGA

mRNA sequence

ATGGACAGTATCCGAGAAGGAAACTCAACTAGCAGACCTCCCCTTTTGGACGGAGAAAATTATGGCTACTGGAAGTCACAAATGGAAGCCTTCCTGATGTCACTCAACATGAGGAGTTGGAGAGCCGTTATATCCGGATGGGAGTATCCCACTGAAAAGGACGAAGCATGCCAAACTGTTCGAAAATCTGAGTTGAAATGGACAAAAGATGAAGATGATGCTCCTGTAGGCAACTCTCGTACACTGAATGCCTTGTTTAATGTCGTCAATCCTAACATATTCAAACTAATCAACACTTGTAAATCGGCCAAGGCTGCCTGGGATATCTTGGAAATCTTGACGTCTCAATTTGAAGCCCTTCAAATGGGTGAAGATGAGACTATAACCGAATTCAATGTCCCTGTCCTTGACATTGCCAACGAATCAGATGCACTCGGGGAAAAAATGTATGACTCCAAACTTGTTCGAAAGGTTCTCAGATCCCTGCCCTTCAAGTTTAACATGAAAGTCACAGCGATCAAAGAAGCTAATGACCTATCTAAAATGAAATTGGATGAACTATTTGGACAGTCAAGAATATCAGATACCTCCTCTTCAGGACACTATCGAAAGAAGGAACACGAACGAGGAAAAGGAACTGAAGCCTCGAAATCTGACAAATTTGGCAAAGGGATCAGGTGTCATGAATGTGAAGGATTTGGACATATCCAAACCGAGTGTGCTACTTATCTTAAACGCAAGAAAAAGGGTATGGTAGCTACCTTATCTGATGAAGAAGATTATTCCGAAAGCGACGATGAAGACCTTGGAATGGCCTTGATTAGTATCTGCACCATGAATGACGAAGAAAATGTTCAAACACATGACCAGCCGAAATCAAATAACTCAACTGAAGACGCAGAAGACAGAAAGAAGACAAAAGATCAAGAAGTTATCCTGCAACAACAAGAACGAATTCAAGATCTAGTGGAAGAGAACCAAAGCTTCCTATCCTCTATAGTAACTCTAAAAGAAGAACTAGCGGAAACCAAGCATCAATTCGAAGAACTCCTAAAATTTGCAAGGATGCCGACAAACGGAACCTCGAAACTAGATGACATACTCGACCAAGGAAGGAGGGCTGACGACAAAAGAGGCCTCGGATTTACAGAAAGGGACACACCTGGAAGGGGCACTGAGATTTCTAGAATGTCTATGAAATCCCTAAACAAGCGAACACGTAGAATTTGTTATTTTTGTGGATGGTACTTTGACAGTGGGTGTTGCAGACACATGACAGGTAATGCAGATTTCTTTTCTGATCTGATTGAATGTAAAGTCGGGTTAGTAGTATTTGAAGATGGAGGAAAAGGAAAAATAATTGGTAAAGGAACGATTAACCGTCTGGGTCTACCGTTTCTTCTTAATGTTCGACTATTACAAGGACTGGCTGCAAACCTCATAAGCATCAGCCAACTATGTGACAAGGCTATCAAGTCAGTTTCAATAAAGATAGATGATGCAAAGGTGACCTTATGCAATTTATCAAAAGTAGAAGAAGCTGGACTCTGGCACAAACGACTTGGACAACTTAGTGGCTCTACTATCTCCAAGGTCACCAAAGCTGATGCCATCATCGATCTTCCCCCGCTATCATTCTCGTCACTAGAAAGATGTTCGGAGTGCCCAGTTGGCAAGCAAGTCAAGTCTGTGCACAAGCCTGTAAATATCGCCTCGACGTCCCATATTTTGGAACTTCTTCATATAGACCTAATGGGGCCCATGCAAACAAAAAGCTTGGGAAGAAAACGGTGTGTAGTAGTGTGTGTAGATGATTTCTCCCGCTACACCTGGATAAAACATGTCAAACCCTATTCACTCAACTCCAAAGAGAAAAATACCGGTATTGGCCGAATACAAACTGATTATGGGCGTGAATTTGAGAATCAGCACTTTGCTGAGTTCTATGATAATGAAGGCATCTTTCATGAGTTCTCTGCTCCTTTAAAACCACAGCAAAATGTAGTTGTAGAGAGAAGGAACCGAACCTTACAGGAGATGGCCCGAGTGATGATTCATGCAAAGCACCTACCAATCCAATTCTGGGTGGAAGCTCTAAACACTGCATGCCATATACATAACAGAGTCATTCTCCGTTCAGGGACCACTACAACCTCATATGAGCTGTGGAAAGGGAGAAAACCAAATGTGAAGTATTTTCACATCTTTGGCAGCACGTGCTTTATCTTGAGTGATAGGGATCATCGTAGAAACTGGGACTCAAAGTCTGATCATGGAATATTTCTGGGATATTCTGCTAACAGCCGAGCCTACAGGGTCTACAACCAGAGTTCCAAAACAGTAATGGAATCCATTAACGTCATTATTGATGACCTTGGTAAGGAACCCAACAGAAATCTTGATGATGAAGATGACAAACTGCGGGTGCAACTGATTCTTCAAAGTGGTGACCTCATACCTCCTACGCATATAACCAAAAACAATCCCTCCAGCTTCATTATTGGAGATATTCACAGTGAAATCATAACTCGGAAGAAGGAGAGGAAAGATTATGCAAAAATGGTTTCCAATGTGTGCTACACATCTTCACTAGAACCAACCACGATCTCTGCAGCACTTTCCGATGAACACTGGATCTTGGCTATGCAGGAAGAGCTACTCCAGTTTAAAAGAAACCAAGTATGGGAATTAATGCCAAAGCCACCTTATGCTAACATAATTGGTACCAAATGGATCTTTAAGAACAAAATGGATGAAGAAGGTAGAGTTATCCGTAAAACCATCCGACTACTGCTAAGCTACGCATGTTTTCGAAGGTTCAAACTGTTCCAAATGGATGTAAAGAGTGTGTTCCTAAATGGGTACTTATTTGAGGAAGTATATGTGGCCCAGCCAAAAGGATTTGTTGATCCAGTACATCAAGATCATGTTTACAAACTTCGAAAGGCACTCTATGGACTTAAACAAGCTCCTAGAGCTTGGTATGAGAGACTCTCCACTTACTTGTTACAACAAGGATATCAAAGGGGTAGTGCGGATCAAACTATGTTTATATATCGTCAAGGCACTGACTTTCTGATCGTTCAGATCTATGTTGACGACATTTTATTTGGTGGTACGTCCTCAGGAGAATTTGAAATGAGCATGGTTGGGGAACTAACCTTCTTCCTGAGGTTTCAAATTAAGCAAGAAAATATAGGGATCTTTTTCTCTCAAGAAAAATATGCAAAAAACCTCATATCTAAGTTTGGTATGGATAAGGCCAGATCTAAAAGAACGCCCGCCGCTACATATCTGAAAATGACTAAGGACACAAATGGTGAAAGAGTTGATACAAACCTGTACCGAAGCATCATTGGGAGCTTGCTCTATTTAACAGCCAGCAGACCGGATATAGCCTTTGCAGTAGGAGTTTGTGCTCGGTATCAGGCTGACCCGCGCACGTCACATCTTCACTGTGCAAAACGAATACTCAAATATATATCAGGTACATTTAACTATGGTATTTGGTATACTTATGACACAACTGGTACTCTTGTTGGCAACTATGATGCAGACTGGGCAGGGTGCACAGATGATAGGAAGAGCACATCTGGAGGGTGCTTCTTCTTAGGGAATAATGTAACTGCTTGTTTCAGCAAGAAACAAAATAGTTACTACTCTCAACTGTTGTGGATGAAACAAATGCTTGATGAATATAGGATAACTCAGTCTTCCATGATTCTCTACTGTGATTATCTGAGCGCAATAAGCATCTCCAAAAATCCAGTTCAACATAGTCTAACAAAGCACATAAATATCCGACATCACTTTACTCGAGAACTCGTTGAAGCCAATATTATAAGATTAGAACATGTTCAAAGTGCCTTTCAGCTAGCAGATATATTTACAAAGCCTCTGGATTTTGCAACATTTGAAGGACTGAGGGCCAGTGTTGGAGTCTGTCAACGGCCCACATGA

Coding sequence (CDS)

ATGGACAGTATCCGAGAAGGAAACTCAACTAGCAGACCTCCCCTTTTGGACGGAGAAAATTATGGCTACTGGAAGTCACAAATGGAAGCCTTCCTGATGTCACTCAACATGAGGAGTTGGAGAGCCGTTATATCCGGATGGGAGTATCCCACTGAAAAGGACGAAGCATGCCAAACTGTTCGAAAATCTGAGTTGAAATGGACAAAAGATGAAGATGATGCTCCTGTAGGCAACTCTCGTACACTGAATGCCTTGTTTAATGTCGTCAATCCTAACATATTCAAACTAATCAACACTTGTAAATCGGCCAAGGCTGCCTGGGATATCTTGGAAATCTTGACGTCTCAATTTGAAGCCCTTCAAATGGGTGAAGATGAGACTATAACCGAATTCAATGTCCCTGTCCTTGACATTGCCAACGAATCAGATGCACTCGGGGAAAAAATGTATGACTCCAAACTTGTTCGAAAGGTTCTCAGATCCCTGCCCTTCAAGTTTAACATGAAAGTCACAGCGATCAAAGAAGCTAATGACCTATCTAAAATGAAATTGGATGAACTATTTGGACAGTCAAGAATATCAGATACCTCCTCTTCAGGACACTATCGAAAGAAGGAACACGAACGAGGAAAAGGAACTGAAGCCTCGAAATCTGACAAATTTGGCAAAGGGATCAGGTGTCATGAATGTGAAGGATTTGGACATATCCAAACCGAGTGTGCTACTTATCTTAAACGCAAGAAAAAGGGTATGGTAGCTACCTTATCTGATGAAGAAGATTATTCCGAAAGCGACGATGAAGACCTTGGAATGGCCTTGATTAGTATCTGCACCATGAATGACGAAGAAAATGTTCAAACACATGACCAGCCGAAATCAAATAACTCAACTGAAGACGCAGAAGACAGAAAGAAGACAAAAGATCAAGAAGTTATCCTGCAACAACAAGAACGAATTCAAGATCTAGTGGAAGAGAACCAAAGCTTCCTATCCTCTATAGTAACTCTAAAAGAAGAACTAGCGGAAACCAAGCATCAATTCGAAGAACTCCTAAAATTTGCAAGGATGCCGACAAACGGAACCTCGAAACTAGATGACATACTCGACCAAGGAAGGAGGGCTGACGACAAAAGAGGCCTCGGATTTACAGAAAGGGACACACCTGGAAGGGGCACTGAGATTTCTAGAATGTCTATGAAATCCCTAAACAAGCGAACACGTAGAATTTGTTATTTTTGTGGATGGTACTTTGACAGTGGGTGTTGCAGACACATGACAGGTAATGCAGATTTCTTTTCTGATCTGATTGAATGTAAAGTCGGGTTAGTAGTATTTGAAGATGGAGGAAAAGGAAAAATAATTGGTAAAGGAACGATTAACCGTCTGGGTCTACCGTTTCTTCTTAATGTTCGACTATTACAAGGACTGGCTGCAAACCTCATAAGCATCAGCCAACTATGTGACAAGGCTATCAAGTCAGTTTCAATAAAGATAGATGATGCAAAGGTGACCTTATGCAATTTATCAAAAGTAGAAGAAGCTGGACTCTGGCACAAACGACTTGGACAACTTAGTGGCTCTACTATCTCCAAGGTCACCAAAGCTGATGCCATCATCGATCTTCCCCCGCTATCATTCTCGTCACTAGAAAGATGTTCGGAGTGCCCAGTTGGCAAGCAAGTCAAGTCTGTGCACAAGCCTGTAAATATCGCCTCGACGTCCCATATTTTGGAACTTCTTCATATAGACCTAATGGGGCCCATGCAAACAAAAAGCTTGGGAAGAAAACGGTGTGTAGTAGTGTGTGTAGATGATTTCTCCCGCTACACCTGGATAAAACATGTCAAACCCTATTCACTCAACTCCAAAGAGAAAAATACCGGTATTGGCCGAATACAAACTGATTATGGGCGTGAATTTGAGAATCAGCACTTTGCTGAGTTCTATGATAATGAAGGCATCTTTCATGAGTTCTCTGCTCCTTTAAAACCACAGCAAAATGTAGTTGTAGAGAGAAGGAACCGAACCTTACAGGAGATGGCCCGAGTGATGATTCATGCAAAGCACCTACCAATCCAATTCTGGGTGGAAGCTCTAAACACTGCATGCCATATACATAACAGAGTCATTCTCCGTTCAGGGACCACTACAACCTCATATGAGCTGTGGAAAGGGAGAAAACCAAATGTGAAGTATTTTCACATCTTTGGCAGCACGTGCTTTATCTTGAGTGATAGGGATCATCGTAGAAACTGGGACTCAAAGTCTGATCATGGAATATTTCTGGGATATTCTGCTAACAGCCGAGCCTACAGGGTCTACAACCAGAGTTCCAAAACAGTAATGGAATCCATTAACGTCATTATTGATGACCTTGGTAAGGAACCCAACAGAAATCTTGATGATGAAGATGACAAACTGCGGGTGCAACTGATTCTTCAAAGTGGTGACCTCATACCTCCTACGCATATAACCAAAAACAATCCCTCCAGCTTCATTATTGGAGATATTCACAGTGAAATCATAACTCGGAAGAAGGAGAGGAAAGATTATGCAAAAATGGTTTCCAATGTGTGCTACACATCTTCACTAGAACCAACCACGATCTCTGCAGCACTTTCCGATGAACACTGGATCTTGGCTATGCAGGAAGAGCTACTCCAGTTTAAAAGAAACCAAGTATGGGAATTAATGCCAAAGCCACCTTATGCTAACATAATTGGTACCAAATGGATCTTTAAGAACAAAATGGATGAAGAAGGTAGAGTTATCCGTAAAACCATCCGACTACTGCTAAGCTACGCATGTTTTCGAAGGTTCAAACTGTTCCAAATGGATGTAAAGAGTGTGTTCCTAAATGGGTACTTATTTGAGGAAGTATATGTGGCCCAGCCAAAAGGATTTGTTGATCCAGTACATCAAGATCATGTTTACAAACTTCGAAAGGCACTCTATGGACTTAAACAAGCTCCTAGAGCTTGGTATGAGAGACTCTCCACTTACTTGTTACAACAAGGATATCAAAGGGGTAGTGCGGATCAAACTATGTTTATATATCGTCAAGGCACTGACTTTCTGATCGTTCAGATCTATGTTGACGACATTTTATTTGGTGGTACGTCCTCAGGAGAATTTGAAATGAGCATGGTTGGGGAACTAACCTTCTTCCTGAGGTTTCAAATTAAGCAAGAAAATATAGGGATCTTTTTCTCTCAAGAAAAATATGCAAAAAACCTCATATCTAAGTTTGGTATGGATAAGGCCAGATCTAAAAGAACGCCCGCCGCTACATATCTGAAAATGACTAAGGACACAAATGGTGAAAGAGTTGATACAAACCTGTACCGAAGCATCATTGGGAGCTTGCTCTATTTAACAGCCAGCAGACCGGATATAGCCTTTGCAGTAGGAGTTTGTGCTCGGTATCAGGCTGACCCGCGCACGTCACATCTTCACTGTGCAAAACGAATACTCAAATATATATCAGGTACATTTAACTATGGTATTTGGTATACTTATGACACAACTGGTACTCTTGTTGGCAACTATGATGCAGACTGGGCAGGGTGCACAGATGATAGGAAGAGCACATCTGGAGGGTGCTTCTTCTTAGGGAATAATGTAACTGCTTGTTTCAGCAAGAAACAAAATAGTTACTACTCTCAACTGTTGTGGATGAAACAAATGCTTGATGAATATAGGATAACTCAGTCTTCCATGATTCTCTACTGTGATTATCTGAGCGCAATAAGCATCTCCAAAAATCCAGTTCAACATAGTCTAACAAAGCACATAAATATCCGACATCACTTTACTCGAGAACTCGTTGAAGCCAATATTATAAGATTAGAACATGTTCAAAGTGCCTTTCAGCTAGCAGATATATTTACAAAGCCTCTGGATTTTGCAACATTTGAAGGACTGAGGGCCAGTGTTGGAGTCTGTCAACGGCCCACATGA

Protein sequence

MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVRKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSSGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQNSYYSQLLWMKQMLDEYRITQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVCQRPT
Homology
BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 5.1e-97
Identity = 289/1048 (27.58%), Postives = 477/1048 (45.52%), Query Frame = 0

Query: 415  WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTI---NRLGLPFLL-NV 474
            W  D+    H T   D F   +    G V   +    KI G G I     +G   +L +V
Sbjct: 294  WVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDV 353

Query: 475  RLLQGLAANLIS----------------------ISQLCDKAIKSVSIKIDDAKVTLCNL 534
            R +  L  NLIS                       S +  K +   ++   +A++    L
Sbjct: 354  RHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGEL 413

Query: 535  SKVEE---AGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVH 594
            +  ++     LWHKR+G +S   +  + K   I        ++++ C  C  GKQ + V 
Sbjct: 414  NAAQDEISVDLWHKRMGHMSEKGLQILAKKSLI---SYAKGTTVKPCDYCLFGKQHR-VS 473

Query: 595  KPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKP-------- 654
               +     +IL+L++ D+ GPM+ +S+G  +  V  +DD SR  W+  +K         
Sbjct: 474  FQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVF 533

Query: 655  ---YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRN 714
               ++L  +E    + R+++D G E+ ++ F E+  + GI HE + P  PQ N V ER N
Sbjct: 534  QKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMN 593

Query: 715  RTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYEL----WKGRKPNV 774
            RT+ E  R M+    LP  FW EA+ TAC++ N    RS +   ++E+    W  ++ + 
Sbjct: 594  RTIVEKVRSMLRMAKLPKSFWGEAVQTACYLIN----RSPSVPLAFEIPERVWTNKEVSY 653

Query: 775  KYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIID 834
             +  +FG   F    ++ R   D KS   IF+GY      YR+++   K V+ S +V+  
Sbjct: 654  SHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFR 713

Query: 835  DLGKEPNRNLDDEDDKLRVQLILQSGDLIPPTHITKNNPSSFII--------GDIHSEII 894
            +      R   D  +K++   I+ +   IP    T NNP+S           G+   E+I
Sbjct: 714  E---SEVRTAADMSEKVK-NGIIPNFVTIPS---TSNNPTSAESTTDEVSEQGEQPGEVI 773

Query: 895  TRKKERKDYAKMVSN-----------------------------VCYTSSLEPTTISAAL 954
             + ++  +  + V +                             V  +   EP ++   L
Sbjct: 774  EQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVL 833

Query: 955  S---DEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----- 1014
            S       + AMQEE+   ++N  ++L+  P     +  KW+FK K D + +++R     
Sbjct: 834  SHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARL 893

Query: 1015 -----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYV 1074
                                    +IR +LS A     ++ Q+DVK+ FL+G L EE+Y+
Sbjct: 894  VVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYM 953

Query: 1075 AQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYR-Q 1134
             QP+GF     +  V KL K+LYGLKQAPR WY +  +++  Q Y +  +D  ++  R  
Sbjct: 954  EQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFS 1013

Query: 1135 GTDFLIVQIYVDDILFGGTSSG-----------EFEMSMVGELTFFLRFQIKQENIG--I 1194
              +F+I+ +YVDD+L  G   G            F+M  +G     L  +I +E     +
Sbjct: 1014 ENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKL 1073

Query: 1195 FFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTN------LYRSIIGSL 1254
            + SQEKY + ++ +F M  A+   TP A +LK++K      V+         Y S +GSL
Sbjct: 1074 WLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSL 1133

Query: 1255 LY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVG 1314
            +Y +  +RPDIA AVGV +R+  +P   H    K IL+Y+ GT    + +   +   L G
Sbjct: 1134 MYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG-GSDPILKG 1193

BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 321.2 bits (822), Expect = 5.3e-86
Identity = 296/1125 (26.31%), Postives = 477/1125 (42.40%), Query Frame = 0

Query: 413  CGWYFDSGCCRHMTGNADFFSDLIECKVGL-VVFEDGGKGKIIGKGTINRLGLPF---LL 472
            CG+  DSG   H+  +   ++D +E    L +     G+     K  I RL       L 
Sbjct: 287  CGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLE 346

Query: 473  NVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLC--NLSKVEEAG----------- 532
            +V   +  A NL+S+ +L +     +SI+ D + VT+    L  V+ +G           
Sbjct: 347  DVLFCKEAAGNLMSVKRLQE---AGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVINFQ 406

Query: 533  -------------LWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSL--ERCSECPVGKQ 592
                         LWH+R G +S   + ++ + +   D   L+   L  E C  C  GKQ
Sbjct: 407  AYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQ 466

Query: 593  VKSVHKPVNIASTSHI---LELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRY--TWIKHV 652
             +   K   +   +HI   L ++H D+ GP+   +L  K   V+ VD F+ Y  T++   
Sbjct: 467  ARLPFK--QLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKY 526

Query: 653  KP---------YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQ 712
            K           + +    N  +  +  D GRE+ +    +F   +GI +  + P  PQ 
Sbjct: 527  KSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQL 586

Query: 713  NVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRS--GTTTTSYELWK 772
            N V ER  RT+ E AR M+    L   FW EA+ TA ++ NR+  R+   ++ T YE+W 
Sbjct: 587  NGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWH 646

Query: 773  GRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYS------------------- 832
             +KP +K+  +FG+T ++   ++ +  +D KS   IF+GY                    
Sbjct: 647  NKKPYLKHLRVFGATVYV-HIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARD 706

Query: 833  --------ANSRAYRVYNQSSKTVMESIN-------------------------VIIDDL 892
                     NSRA +      K   ES N                           + D 
Sbjct: 707  VVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDS 766

Query: 893  GKEPNRNLDDEDDKL-------------RVQLILQSGDLIP-----------PTHITKN- 952
             +  N+N  ++  K+              +Q +  S +                H+ ++ 
Sbjct: 767  KESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESK 826

Query: 953  ---NPSSFIIGDIHS----------------EIITRKKERKDYAKMVSNVCYTSSLEPTT 1012
               NP+     +                   EII R+ ER      +S     +SL    
Sbjct: 827  GSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVV 886

Query: 1013 ISAAL----------------SDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWI 1072
            ++A                      W  A+  EL   K N  W +  +P   NI+ ++W+
Sbjct: 887  LNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWV 946

Query: 1073 FKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQ 1132
            F  K +E G  IR                             + R +LS       K+ Q
Sbjct: 947  FSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQ 1006

Query: 1133 MDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQ 1192
            MDVK+ FLNG L EE+Y+  P+G     + D+V KL KA+YGLKQA R W+E     L +
Sbjct: 1007 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1066

Query: 1193 QGYQRGSADQTMFIYRQG--TDFLIVQIYVDDIL-----------FGGTSSGEFEMSMVG 1252
              +   S D+ ++I  +G   + + V +YVDD++           F      +F M+ + 
Sbjct: 1067 CEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLN 1126

Query: 1253 ELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVD 1312
            E+  F+  +I+ +   I+ SQ  Y K ++SKF M+   +  TP  + +      + E  +
Sbjct: 1127 EIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN 1186

Query: 1313 TNLYRSIIGSLLY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIW 1317
            T   RS+IG L+Y +  +RPD+  AV + +RY +   +      KR+L+Y+ GT +  + 
Sbjct: 1187 TPC-RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLI 1246

BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 8.2e-79
Identity = 186/534 (34.83%), Postives = 276/534 (51.69%), Query Frame = 0

Query: 843  TRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM-P 902
            TR K+  RK   K        ++ EP T   A+ D+ W  AM  E+     N  W+L+ P
Sbjct: 914  TRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPP 973

Query: 903  KPPYANIIGTKWIFKNKMDEEG-------RVIRK---------------------TIRLL 962
             PP   I+G +WIF  K + +G       R++ K                     +IR++
Sbjct: 974  PPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIV 1033

Query: 963  LSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAP 1022
            L  A  R + + Q+DV + FL G L +EVY++QP GFVD    D+V +LRKA+YGLKQAP
Sbjct: 1034 LGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAP 1093

Query: 1023 RAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS---------- 1082
            RAWY  L TYLL  G+    +D ++F+ ++G   + + +YVDDIL  G            
Sbjct: 1094 RAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDA 1153

Query: 1083 -SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLK 1142
             S  F +    +L +FL  + K+   G+  SQ +Y  +L+++  M  A+   TP AT  K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 1143 MTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKY 1202
            +T  +  +  D   YR I+GSL YL  +RPD+++AV   ++Y   P   H +  KR+L+Y
Sbjct: 1214 LTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRY 1273

Query: 1203 ISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQNSYY 1262
            ++GT ++GI+     T +L    DADWAG TDD  ST+G   +LG++  +  SKKQ    
Sbjct: 1274 LAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVV 1333

Query: 1263 ---------------SQLLWMKQMLDEYRITQS-SMILYCDYLSAISISKNPVQHSLTKH 1319
                           S+L W+  +L E  I  S   ++YCD + A  +  NPV HS  KH
Sbjct: 1334 RSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKH 1393

BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-77
Identity = 182/518 (35.14%), Postives = 270/518 (52.12%), Query Frame = 0

Query: 858  VCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPP-YANIIGTKWIFKNK 917
            V   +  EP T   AL DE W  AM  E+     N  W+L+P PP +  I+G +WIF  K
Sbjct: 948  VSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKK 1007

Query: 918  MDEEG-------RVIRK---------------------TIRLLLSYACFRRFKLFQMDVK 977
             + +G       R++ K                     +IR++L  A  R + + Q+DV 
Sbjct: 1008 YNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVN 1067

Query: 978  SVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQ 1037
            + FL G L ++VY++QP GF+D    ++V KLRKALYGLKQAPRAWY  L  YLL  G+ 
Sbjct: 1068 NAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFV 1127

Query: 1038 RGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS-----------SGEFEMSMVGELTFFL 1097
               +D ++F+ ++G   + + +YVDDIL  G             S  F +    EL +FL
Sbjct: 1128 NSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFL 1187

Query: 1098 RFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRS 1157
              + K+   G+  SQ +Y  +L+++  M  A+   TP A   K++  +  +  D   YR 
Sbjct: 1188 GIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRG 1247

Query: 1158 IIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTG 1217
            I+GSL YL  +RPDI++AV   +++   P   HL   KRIL+Y++GT N+GI+     T 
Sbjct: 1248 IVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTL 1307

Query: 1218 TLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQNSYY---------------SQ 1277
            +L    DADWAG  DD  ST+G   +LG++  +  SKKQ                   S+
Sbjct: 1308 SLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSE 1367

Query: 1278 LLWMKQMLDE--YRITQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANI 1319
            + W+  +L E   R+T+   ++YCD + A  +  NPV HS  KHI I +HF R  V++  
Sbjct: 1368 MQWICSLLTELGIRLTRPP-VIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGA 1427

BLAST of Pay0004819 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-27
Identity = 71/198 (35.86%), Postives = 111/198 (56.06%), Query Frame = 0

Query: 1030 IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKN 1089
            +YVDDIL  G+S           S  F M  +G + +FL  QIK    G+F SQ KYA+ 
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1090 LISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGV 1149
            +++  GM   +   TP    L  +  T  +  D + +RSI+G+L YLT +RPDI++AV +
Sbjct: 65   ILNNAGMLDCKPMSTPLPLKLNSSVST-AKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 1150 CARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTS 1209
              +   +P  +     KR+L+Y+ GT  +G++   ++   +    D+DWAGCT  R+ST+
Sbjct: 125  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 184

Query: 1210 GGCFFLGNNVTACFSKKQ 1217
            G C FLG N+ +  +K+Q
Sbjct: 185  GFCTFLGCNIISWSAKRQ 201

BLAST of Pay0004819 vs. ExPASy TrEMBL
Match: A0A5A7V046 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001550 PE=4 SV=1)

HSP 1 Score: 1452.2 bits (3758), Expect = 0.0e+00
Identity = 822/1251 (65.71%), Postives = 868/1251 (69.38%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            MD IRE NSTSRP LLDG NYGYWKS+M+AFLMSL+MR                      
Sbjct: 1    MDGIREENSTSRPLLLDGGNYGYWKSRMKAFLMSLDMR---------------------- 60

Query: 61   RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILE--------- 120
                     +EDDA +GNSR LNAL NVV+PNIFKLINTCKSAKA WDILE         
Sbjct: 61   ---------NEDDAALGNSRALNALVNVVDPNIFKLINTCKSAKATWDILEVAFKGTSKV 120

Query: 121  -------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPF 180
                   ILTS+FEALQMGE ETI EFNV VLDIANESDALGEKM DSKLVRKVLRSLP 
Sbjct: 121  KISRRLQILTSRFEALQMGEGETIAEFNVRVLDIANESDALGEKMSDSKLVRKVLRSLPS 180

Query: 181  KFNMKVTAIKEANDLSKMKLDELFG----------------------------------- 240
            KFNMKVTAI+EANDLSKMKLDELFG                                   
Sbjct: 181  KFNMKVTAIEEANDLSKMKLDELFGSLRAFEIHLGHTTSRRKLGLALTSVAKLKNQFHKH 240

Query: 241  --------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH 300
                          Q RISDTSSSGH RKKEHERGK  +ASKSDK+GKGIRCHECEGFGH
Sbjct: 241  MGSQRNNREDQTLRQLRISDTSSSGHCRKKEHERGKEIKASKSDKYGKGIRCHECEGFGH 300

Query: 301  IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNN 360
            IQ ECATYLKRKKKGMVAT SDEEDYSESDDEDLGMALIS+CTMNDEENVQTHDQ +S N
Sbjct: 301  IQAECATYLKRKKKGMVATFSDEEDYSESDDEDLGMALISVCTMNDEENVQTHDQLESKN 360

Query: 361  STEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFAR 420
             T D  +R K +DQEVILQQQERIQDLVEENQSFLSSIVTLKEELA+TKHQFEELLKFAR
Sbjct: 361  LTNDTANR-KIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAKTKHQFEELLKFAR 420

Query: 421  MPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEI 480
            M T GTSKLDDILDQG RADDKRGL F ERDTP                     G+GTEI
Sbjct: 421  MLTKGTSKLDDILDQGMRADDKRGLRFAERDTPVRKTVFIREGTLQNSPTNNEQGKGTEI 480

Query: 481  SRMSMKSLNKRTRRIC------------------YFCGWYFDSGCCRHMTGNADFFSDLI 540
            + M  K L       C                      WYFDSGC RHMTGNADFFS+L 
Sbjct: 481  TSMPTKHLRSPRTEWCRKIHIENCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELS 540

Query: 541  ECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI 600
            ECKVG VVF DGGKGKIIGKGTIN  GLPFLL+VRL+QGLAANLISISQLCD+  + VS 
Sbjct: 541  ECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQ-VSF 600

Query: 601  KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISK 660
              D                         DA+VTLCNLSKVEEA LWHKRLG LSG+TISK
Sbjct: 601  NKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLSGATISK 660

Query: 661  VTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTK 720
            VTK DAII LPPL+F SLE CSEC  GKQVKSVHKPVNI+STSHILELLHIDLMGPMQT+
Sbjct: 661  VTKVDAIIGLPPLTFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTE 720

Query: 721  SLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREF 780
            SLGRK   VVCVDDFSRYTWIK +  KP +  +         +EKNTGIG+IQTD+G EF
Sbjct: 721  SLGRKWYAVVCVDDFSRYTWIKFILDKPETFKTCQTLFTQLQREKNTGIGQIQTDHGHEF 780

Query: 781  ENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALN 840
            ENQHFAEF DNEGIFHEFSAPL  QQN V                           EALN
Sbjct: 781  ENQHFAEFCDNEGIFHEFSAPLTLQQNGV--------------------------AEALN 840

Query: 841  TACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI 900
            TACHIHNRVILR GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRR WDSKSD GI
Sbjct: 841  TACHIHNRVILRPGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRKWDSKSDRGI 900

Query: 901  FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQL 960
            FLGY ANSRAYRVYNQ SK VMESINVIIDDL     + P R      L       R+ +
Sbjct: 901  FLGYLANSRAYRVYNQCSKIVMESINVIIDDLDEGELESPARTNETTYLPSHLGLSRIDM 960

Query: 961  ILQSG---------------------------------DLIPPTHITKNNPSSFIIGDIH 1020
               S                                  DLIPPTH  KN+PSSFII DIH
Sbjct: 961  STPSTSAIHCNTHESEAIVSASQHTPEQTAGATDSSKCDLIPPTHTAKNHPSSFIIRDIH 1020

Query: 1021 SEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM 1042
            S IITRKKERKDYAKMV+NVCYTS LEPTT+SAALSDEHWIL +QEELLQF+RNQVWEL+
Sbjct: 1021 SGIITRKKERKDYAKMVANVCYTSLLEPTTVSAALSDEHWILTIQEELLQFERNQVWELV 1080

BLAST of Pay0004819 vs. ExPASy TrEMBL
Match: A0A5D3C778 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00750 PE=4 SV=1)

HSP 1 Score: 1280.4 bits (3312), Expect = 0.0e+00
Identity = 677/823 (82.26%), Postives = 697/823 (84.69%), Query Frame = 0

Query: 122 MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 181
           MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK
Sbjct: 1   MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 60

Query: 182 MKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 241
           MKLDELFG S  +D   +GHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA
Sbjct: 61  MKLDELFGISSYAD--KTGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 120

Query: 242 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 301
           TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE
Sbjct: 121 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 180

Query: 302 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 361
           DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT
Sbjct: 181 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 240

Query: 362 SKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC 421
           SKLDDILDQGRRADDKRGLGFTERDTP       ++  +S N+ T +  +          
Sbjct: 241 SKLDDILDQGRRADDKRGLGFTERDTPATRYSTDQIPEESHNRMTPKKPH---------- 300

Query: 422 CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 481
            R + GNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI
Sbjct: 301 -RKLQGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 360

Query: 482 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 541
           SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL
Sbjct: 361 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 420

Query: 542 PPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVV 601
           PPLSFSSLERCSECPVGKQVKSVHKP                                  
Sbjct: 421 PPLSFSSLERCSECPVGKQVKSVHKPKP-------------------------------- 480

Query: 602 CVDDFSRYTWIKHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 661
                      +HVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP
Sbjct: 481 ----------SRHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 540

Query: 662 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 721
           LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Sbjct: 541 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 600

Query: 722 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 781
           LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV
Sbjct: 601 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 660

Query: 782 MESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPPT----HITKNNPSSFIIGDI 841
           MESINVIIDDLG+  +    +E   L   L     D+   +    H   +   + +    
Sbjct: 661 MESINVIIDDLGELESTARTNETTYLPSHLGSSRSDMSTSSTSAIHTDTHESEASVSASQ 720

Query: 842 HS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 901
           H+             EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE
Sbjct: 721 HTLEQTAGATDSSKCEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 768

Query: 902 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKT 928
           ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRK+
Sbjct: 781 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKS 768

BLAST of Pay0004819 vs. ExPASy TrEMBL
Match: Q84VI4 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 705/1580 (44.62%), Postives = 912/1580 (57.72%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            M+  +EG   +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P   D   +  
Sbjct: 1    MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60

Query: 61   --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
               K E  WTK+ED+  +GNS+ LNALFN V+ NIF+LINTC  AK AW+IL+I      
Sbjct: 61   DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120

Query: 121  ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
                     L ++FE L+M E+E I +F++ +L+IAN   ALGE++ D KLVRK+LRSLP
Sbjct: 121  KVKISRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180

Query: 181  FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
             +F+MKVTAI+EA D+  M++DEL G  +                     +D      Y 
Sbjct: 181  KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240

Query: 241  ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
                                       R+K H +    +  K  K+           KGI
Sbjct: 241  LNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKKSDVKPSHSKGI 300

Query: 301  RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMND 360
            +CH CEG+GHI  EC T+LK+ +KG+    SD E   ESD +    AL  I       +D
Sbjct: 301  QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIFETAEDSSD 360

Query: 361  EENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLK 420
             ++  T D+  ++        RK     E ILQQ+ +    I DL  E ++    I  LK
Sbjct: 361  TDSEITFDELATSY-------RKLCIKSEKILQQEAQLKKVIADLEAEKEAHKEEISELK 420

Query: 421  EELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TP 480
             E+     + E + K  +M   G+  LD++L  G+ A ++RGLGF  +           P
Sbjct: 421  GEVGFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTMTEFVP 480

Query: 481  GRGTEISRMS---------MKSLNKRTRRICYFCG------------------------- 540
             +    + MS          +  +KR +  C++CG                         
Sbjct: 481  AKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQSSNSRK 540

Query: 541  --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
                                      WY DSGC RHMTG  +F  ++  C    V F DG
Sbjct: 541  KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600

Query: 601  GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
             KGKIIG G +   GLP L  V L++GL ANLISISQLCD+       KS  +  ++   
Sbjct: 601  SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660

Query: 661  TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
             L                       C  SK +E  +WH+R G L    + K+    A+  
Sbjct: 661  VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720

Query: 721  LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
            +P L       C EC +GKQVK  H+ +   +TS +LELLH+DLMGPMQ +SLG KR   
Sbjct: 721  IPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780

Query: 781  VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
            V VDDFSR+TW+K +          K  SL   +EK+  I RI++D+GREFEN    EF 
Sbjct: 781  VVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFC 840

Query: 841  DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
             +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP   W EA+NTAC+IHNRV
Sbjct: 841  TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900

Query: 901  ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
             LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR  D KSD GIFLGYS NSR
Sbjct: 901  TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960

Query: 961  AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
            AYRV+N  ++TVMESINV++DDL     ++++++                     D    
Sbjct: 961  AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENSDSATD 1020

Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
            +  +   D    T I K +P   IIGD +  + TR +E     ++VSN C+ S +EP  +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080

Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
              AL+DE WI AMQEEL QFKRN+VWEL+P+P   N+IGTKWIFKNK +EEG + R    
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140

Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
                                    ++IRLLL  AC  +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200

Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
            V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G  D+T+F+ + 
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260

Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
              + +I QIYVDDI+FGG S+            EFEMS+VGELT+FL  Q+KQ    IF 
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320

BLAST of Pay0004819 vs. ExPASy TrEMBL
Match: Q84VH6 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 701/1578 (44.42%), Postives = 914/1578 (57.92%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            M+  +EG   +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P   D   +  
Sbjct: 1    MNMEKEGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60

Query: 61   R--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDI--------- 120
               K E  WTK+ED+  +GNS+ LNALFN V+ NIF+LINTC  AK AW+I         
Sbjct: 61   NELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTS 120

Query: 121  ------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
                  L++L ++FE L+M E+E I +F++ +L+IAN   ALGE+M D KLVRK+LRSLP
Sbjct: 121  KVKMSRLQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLP 180

Query: 181  FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
             +F+MKVTAI+EA D+  M++DEL G  +                     +D      Y 
Sbjct: 181  KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSNDEGEEDEYD 240

Query: 241  ---------------------------RKKEHERG------KGTE-ASKSDK---FGKGI 300
                                       R+K H R       KG+E   KSD+     KGI
Sbjct: 241  LDTDEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPSHSKGI 300

Query: 301  RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
            +C  CEG+GHI+ EC T+LK+++KG+    SD+ +  +  D D  +  ++    + E++ 
Sbjct: 301  QCRGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESAEDSS 360

Query: 361  QTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEELA 420
             T  +   +        R+     E ILQQ+ +    I +L  E ++    I  LK E+ 
Sbjct: 361  DTDSEITFDELA--IFYRELCIKSEKILQQEAQLKKVIANLEAEKEAHEEEISKLKGEVG 420

Query: 421  ETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGT 480
                + E + K  +M   G+  LD++L  G++  ++RGLGF  +           P + +
Sbjct: 421  FLNSKLENMTKSIKMLNKGSDMLDZVLQLGKKVGNQRGLGFNHKSAGRTTMTEFVPAKNS 480

Query: 481  EISRMS---------MKSLNKRTRRICYFCG----------------------------- 540
              + MS          +  +KR +  C++CG                             
Sbjct: 481  TGATMSQHRSRHHGTQQKRSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQGSSSGRKM 540

Query: 541  ------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK 600
                                    WY DSGC RHMTG  +F  ++  C    V F DG K
Sbjct: 541  MWVPKHKIVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSK 600

Query: 601  GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL 660
            GKI G G +   GLP L  V L++GL  NLISISQLCD+       KS  +  ++    L
Sbjct: 601  GKITGMGKLVHEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVL 660

Query: 661  -----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLP 720
                                   C  SK +E  +WH+R G L    + K+    A+  +P
Sbjct: 661  MKGSRSKDNCYLWTPQESSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIP 720

Query: 721  PLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVC 780
             L       C EC +GKQVK  H+ +   +TS +LELLH+DLMGPMQ +SLG KR   V 
Sbjct: 721  NLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVV 780

Query: 781  VDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDN 840
            VDDFSR+TW+  +          K  SL   +EK+  I RI++D+GREFEN  F EF  +
Sbjct: 781  VDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTS 840

Query: 841  EGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL 900
            EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP   W EA+NTAC+IHNRV L
Sbjct: 841  EGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTL 900

Query: 901  RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAY 960
            R GT TT YE+WKGRKP VK+FHIFGS C+IL+DR+ RR  D KSD GIFLGYS NSRAY
Sbjct: 901  RRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAY 960

Query: 961  RVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRVQL 1020
            RV+N  ++TVMESINV++DDL     ++++++                     D    + 
Sbjct: 961  RVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEP 1020

Query: 1021 ILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISA 1080
             +   D  P   I K +P   IIGD +  + TR +E     ++VSN C+ S +EP  +  
Sbjct: 1021 NINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSRE----IEIVSNSCFVSKIEPKNVKE 1080

Query: 1081 ALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR------ 1140
            AL+DE WI AMQEEL QFKRN+VWEL+P+P   N+IGTKWIFKNK +EEG + R      
Sbjct: 1081 ALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLV 1140

Query: 1141 ----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA 1200
                                  ++IRLLL  AC  +FKL+QMDVKS FLNGYL EE YV 
Sbjct: 1141 AQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVE 1200

Query: 1201 QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGT 1260
            QPKGFVDP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G  D+T+F+ +   
Sbjct: 1201 QPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAE 1260

Query: 1261 DFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFFSQ 1316
            + +I QIYVDDI+FGG S+            EFEMS+VGELT+FL  Q+KQ    IF SQ
Sbjct: 1261 NLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQ 1320

BLAST of Pay0004819 vs. ExPASy TrEMBL
Match: Q84VH8 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 706/1580 (44.68%), Postives = 913/1580 (57.78%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            M+  +EG   +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P   D   +  
Sbjct: 1    MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60

Query: 61   --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
               K E  WTK+ED+  +GNS+ LNALFN V+ NIF+LINTC  AK AW+IL+I      
Sbjct: 61   DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120

Query: 121  ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
                     L ++FE L+M E+E I +F++ +L+IAN   ALGE++ D KLVRK+LRSLP
Sbjct: 121  KVKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180

Query: 181  FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
             +F+MKVTAI+EA D+  M++DEL G  +                     +D      Y 
Sbjct: 181  KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240

Query: 241  ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
                                       R+K H +    +  K  K+           KGI
Sbjct: 241  LDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPSHSKGI 300

Query: 301  RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
            +CH CEG+GHI  EC T+LK+ +KG+    SD E   ESD +    AL  I      E  
Sbjct: 301  QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIF-----ETA 360

Query: 361  QTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEE 420
            +      S  + ++  A  RK     E ILQQ+ +    I DL  E ++    I  LK E
Sbjct: 361  EDSSDTDSEITFDELAASYRKLCIKSEKILQQEAQLKKVIADLEAEKEAHEEEISELKGE 420

Query: 421  LAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR 480
            +     + E + K  +M   G+  LD++L  G+ A ++RGLGF  +           P +
Sbjct: 421  VGFLNSKLETMKKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKFAGRTTMTEFVPAK 480

Query: 481  ---GTEISRM------SMKSLNKRTRRICYFCG--------------------------- 540
               GT +S+       + +  +KR +  C++CG                           
Sbjct: 481  NRTGTTMSQHLSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRK 540

Query: 541  --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
                                      WY DSGC RHMTG  +F  ++  C    V F DG
Sbjct: 541  KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600

Query: 601  GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
             KGKIIG G +   GLP L  V L++GL ANLISISQLCD+       KS  +  ++   
Sbjct: 601  SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660

Query: 661  TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
             L                       C  SK +E  +WH+R G L    + K+    A+  
Sbjct: 661  VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720

Query: 721  LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
            +P L       C EC +GKQVK  H+ +   +TS +LELLH+DLMGPMQ +SLG KR   
Sbjct: 721  IPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780

Query: 781  VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
            V VDDFSR+TW+  +          K  SL   +EK+  I RI++D+GREFEN  F EF 
Sbjct: 781  VVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFC 840

Query: 841  DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
             +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP   W EA+NTAC+IHNRV
Sbjct: 841  TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900

Query: 901  ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
             LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR  D KSD GIFLGYS NSR
Sbjct: 901  TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960

Query: 961  AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
            AYRV+N  ++TVMESINV++DDL     ++++++                     D    
Sbjct: 961  AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLGDNVADAAKSGENAENSDSATD 1020

Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
            +  +   D    T I K +P   IIGD +  + TR +E     ++VSN C+ S +EP  +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080

Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
              AL+DE WI AMQEEL QFKRN+VWEL+P+P   N+IGTKWIFKNK +EEG + R    
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140

Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
                                    ++IRLLL  AC  +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200

Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
            V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G  D+T+F+ + 
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260

Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
              + +I QIYVDDI+FGG S+            EFEMS+VGELT+FL  Q+KQ    IF 
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320

BLAST of Pay0004819 vs. NCBI nr
Match: KAA0059225.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1452.2 bits (3758), Expect = 0.0e+00
Identity = 822/1251 (65.71%), Postives = 868/1251 (69.38%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            MD IRE NSTSRP LLDG NYGYWKS+M+AFLMSL+MR                      
Sbjct: 1    MDGIREENSTSRPLLLDGGNYGYWKSRMKAFLMSLDMR---------------------- 60

Query: 61   RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILE--------- 120
                     +EDDA +GNSR LNAL NVV+PNIFKLINTCKSAKA WDILE         
Sbjct: 61   ---------NEDDAALGNSRALNALVNVVDPNIFKLINTCKSAKATWDILEVAFKGTSKV 120

Query: 121  -------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPF 180
                   ILTS+FEALQMGE ETI EFNV VLDIANESDALGEKM DSKLVRKVLRSLP 
Sbjct: 121  KISRRLQILTSRFEALQMGEGETIAEFNVRVLDIANESDALGEKMSDSKLVRKVLRSLPS 180

Query: 181  KFNMKVTAIKEANDLSKMKLDELFG----------------------------------- 240
            KFNMKVTAI+EANDLSKMKLDELFG                                   
Sbjct: 181  KFNMKVTAIEEANDLSKMKLDELFGSLRAFEIHLGHTTSRRKLGLALTSVAKLKNQFHKH 240

Query: 241  --------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH 300
                          Q RISDTSSSGH RKKEHERGK  +ASKSDK+GKGIRCHECEGFGH
Sbjct: 241  MGSQRNNREDQTLRQLRISDTSSSGHCRKKEHERGKEIKASKSDKYGKGIRCHECEGFGH 300

Query: 301  IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNN 360
            IQ ECATYLKRKKKGMVAT SDEEDYSESDDEDLGMALIS+CTMNDEENVQTHDQ +S N
Sbjct: 301  IQAECATYLKRKKKGMVATFSDEEDYSESDDEDLGMALISVCTMNDEENVQTHDQLESKN 360

Query: 361  STEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFAR 420
             T D  +R K +DQEVILQQQERIQDLVEENQSFLSSIVTLKEELA+TKHQFEELLKFAR
Sbjct: 361  LTNDTANR-KIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAKTKHQFEELLKFAR 420

Query: 421  MPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEI 480
            M T GTSKLDDILDQG RADDKRGL F ERDTP                     G+GTEI
Sbjct: 421  MLTKGTSKLDDILDQGMRADDKRGLRFAERDTPVRKTVFIREGTLQNSPTNNEQGKGTEI 480

Query: 481  SRMSMKSLNKRTRRIC------------------YFCGWYFDSGCCRHMTGNADFFSDLI 540
            + M  K L       C                      WYFDSGC RHMTGNADFFS+L 
Sbjct: 481  TSMPTKHLRSPRTEWCRKIHIENCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELS 540

Query: 541  ECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI 600
            ECKVG VVF DGGKGKIIGKGTIN  GLPFLL+VRL+QGLAANLISISQLCD+  + VS 
Sbjct: 541  ECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQ-VSF 600

Query: 601  KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISK 660
              D                         DA+VTLCNLSKVEEA LWHKRLG LSG+TISK
Sbjct: 601  NKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLSGATISK 660

Query: 661  VTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTK 720
            VTK DAII LPPL+F SLE CSEC  GKQVKSVHKPVNI+STSHILELLHIDLMGPMQT+
Sbjct: 661  VTKVDAIIGLPPLTFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTE 720

Query: 721  SLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREF 780
            SLGRK   VVCVDDFSRYTWIK +  KP +  +         +EKNTGIG+IQTD+G EF
Sbjct: 721  SLGRKWYAVVCVDDFSRYTWIKFILDKPETFKTCQTLFTQLQREKNTGIGQIQTDHGHEF 780

Query: 781  ENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALN 840
            ENQHFAEF DNEGIFHEFSAPL  QQN V                           EALN
Sbjct: 781  ENQHFAEFCDNEGIFHEFSAPLTLQQNGV--------------------------AEALN 840

Query: 841  TACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI 900
            TACHIHNRVILR GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRR WDSKSD GI
Sbjct: 841  TACHIHNRVILRPGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRKWDSKSDRGI 900

Query: 901  FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQL 960
            FLGY ANSRAYRVYNQ SK VMESINVIIDDL     + P R      L       R+ +
Sbjct: 901  FLGYLANSRAYRVYNQCSKIVMESINVIIDDLDEGELESPARTNETTYLPSHLGLSRIDM 960

Query: 961  ILQSG---------------------------------DLIPPTHITKNNPSSFIIGDIH 1020
               S                                  DLIPPTH  KN+PSSFII DIH
Sbjct: 961  STPSTSAIHCNTHESEAIVSASQHTPEQTAGATDSSKCDLIPPTHTAKNHPSSFIIRDIH 1020

Query: 1021 SEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM 1042
            S IITRKKERKDYAKMV+NVCYTS LEPTT+SAALSDEHWIL +QEELLQF+RNQVWEL+
Sbjct: 1021 SGIITRKKERKDYAKMVANVCYTSLLEPTTVSAALSDEHWILTIQEELLQFERNQVWELV 1080

BLAST of Pay0004819 vs. NCBI nr
Match: TYK07190.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1280.4 bits (3312), Expect = 0.0e+00
Identity = 677/823 (82.26%), Postives = 697/823 (84.69%), Query Frame = 0

Query: 122 MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 181
           MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK
Sbjct: 1   MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSK 60

Query: 182 MKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 241
           MKLDELFG S  +D   +GHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA
Sbjct: 61  MKLDELFGISSYAD--KTGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGHIQTECA 120

Query: 242 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 301
           TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE
Sbjct: 121 TYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAE 180

Query: 302 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 361
           DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT
Sbjct: 181 DRKKTKDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGT 240

Query: 362 SKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC 421
           SKLDDILDQGRRADDKRGLGFTERDTP       ++  +S N+ T +  +          
Sbjct: 241 SKLDDILDQGRRADDKRGLGFTERDTPATRYSTDQIPEESHNRMTPKKPH---------- 300

Query: 422 CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 481
            R + GNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI
Sbjct: 301 -RKLQGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLI 360

Query: 482 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 541
           SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL
Sbjct: 361 SISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDL 420

Query: 542 PPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVV 601
           PPLSFSSLERCSECPVGKQVKSVHKP                                  
Sbjct: 421 PPLSFSSLERCSECPVGKQVKSVHKPKP-------------------------------- 480

Query: 602 CVDDFSRYTWIKHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 661
                      +HVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP
Sbjct: 481 ----------SRHVKPYSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAP 540

Query: 662 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 721
           LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Sbjct: 541 LKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE 600

Query: 722 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 781
           LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV
Sbjct: 601 LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTV 660

Query: 782 MESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPPT----HITKNNPSSFIIGDI 841
           MESINVIIDDLG+  +    +E   L   L     D+   +    H   +   + +    
Sbjct: 661 MESINVIIDDLGELESTARTNETTYLPSHLGSSRSDMSTSSTSAIHTDTHESEASVSASQ 720

Query: 842 HS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 901
           H+             EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE
Sbjct: 721 HTLEQTAGATDSSKCEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQE 768

Query: 902 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKT 928
           ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRK+
Sbjct: 781 ELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKS 768

BLAST of Pay0004819 vs. NCBI nr
Match: AAO73521.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 705/1580 (44.62%), Postives = 912/1580 (57.72%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            M+  +EG   +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P   D   +  
Sbjct: 1    MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60

Query: 61   --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
               K E  WTK+ED+  +GNS+ LNALFN V+ NIF+LINTC  AK AW+IL+I      
Sbjct: 61   DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120

Query: 121  ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
                     L ++FE L+M E+E I +F++ +L+IAN   ALGE++ D KLVRK+LRSLP
Sbjct: 121  KVKISRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180

Query: 181  FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
             +F+MKVTAI+EA D+  M++DEL G  +                     +D      Y 
Sbjct: 181  KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240

Query: 241  ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
                                       R+K H +    +  K  K+           KGI
Sbjct: 241  LNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKKSDVKPSHSKGI 300

Query: 301  RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMND 360
            +CH CEG+GHI  EC T+LK+ +KG+    SD E   ESD +    AL  I       +D
Sbjct: 301  QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIFETAEDSSD 360

Query: 361  EENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLK 420
             ++  T D+  ++        RK     E ILQQ+ +    I DL  E ++    I  LK
Sbjct: 361  TDSEITFDELATSY-------RKLCIKSEKILQQEAQLKKVIADLEAEKEAHKEEISELK 420

Query: 421  EELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TP 480
             E+     + E + K  +M   G+  LD++L  G+ A ++RGLGF  +           P
Sbjct: 421  GEVGFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTMTEFVP 480

Query: 481  GRGTEISRMS---------MKSLNKRTRRICYFCG------------------------- 540
             +    + MS          +  +KR +  C++CG                         
Sbjct: 481  AKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQSSNSRK 540

Query: 541  --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
                                      WY DSGC RHMTG  +F  ++  C    V F DG
Sbjct: 541  KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600

Query: 601  GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
             KGKIIG G +   GLP L  V L++GL ANLISISQLCD+       KS  +  ++   
Sbjct: 601  SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660

Query: 661  TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
             L                       C  SK +E  +WH+R G L    + K+    A+  
Sbjct: 661  VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720

Query: 721  LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
            +P L       C EC +GKQVK  H+ +   +TS +LELLH+DLMGPMQ +SLG KR   
Sbjct: 721  IPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780

Query: 781  VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
            V VDDFSR+TW+K +          K  SL   +EK+  I RI++D+GREFEN    EF 
Sbjct: 781  VVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFC 840

Query: 841  DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
             +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP   W EA+NTAC+IHNRV
Sbjct: 841  TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900

Query: 901  ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
             LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR  D KSD GIFLGYS NSR
Sbjct: 901  TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960

Query: 961  AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
            AYRV+N  ++TVMESINV++DDL     ++++++                     D    
Sbjct: 961  AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENSDSATD 1020

Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
            +  +   D    T I K +P   IIGD +  + TR +E     ++VSN C+ S +EP  +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080

Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
              AL+DE WI AMQEEL QFKRN+VWEL+P+P   N+IGTKWIFKNK +EEG + R    
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140

Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
                                    ++IRLLL  AC  +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200

Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
            V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G  D+T+F+ + 
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260

Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
              + +I QIYVDDI+FGG S+            EFEMS+VGELT+FL  Q+KQ    IF 
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320

BLAST of Pay0004819 vs. NCBI nr
Match: AAO73529.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 701/1578 (44.42%), Postives = 914/1578 (57.92%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            M+  +EG   +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P   D   +  
Sbjct: 1    MNMEKEGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60

Query: 61   R--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDI--------- 120
               K E  WTK+ED+  +GNS+ LNALFN V+ NIF+LINTC  AK AW+I         
Sbjct: 61   NELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTS 120

Query: 121  ------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
                  L++L ++FE L+M E+E I +F++ +L+IAN   ALGE+M D KLVRK+LRSLP
Sbjct: 121  KVKMSRLQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLP 180

Query: 181  FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
             +F+MKVTAI+EA D+  M++DEL G  +                     +D      Y 
Sbjct: 181  KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSNDEGEEDEYD 240

Query: 241  ---------------------------RKKEHERG------KGTE-ASKSDK---FGKGI 300
                                       R+K H R       KG+E   KSD+     KGI
Sbjct: 241  LDTDEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPSHSKGI 300

Query: 301  RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
            +C  CEG+GHI+ EC T+LK+++KG+    SD+ +  +  D D  +  ++    + E++ 
Sbjct: 301  QCRGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESAEDSS 360

Query: 361  QTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEELA 420
             T  +   +        R+     E ILQQ+ +    I +L  E ++    I  LK E+ 
Sbjct: 361  DTDSEITFDELA--IFYRELCIKSEKILQQEAQLKKVIANLEAEKEAHEEEISKLKGEVG 420

Query: 421  ETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGT 480
                + E + K  +M   G+  LD++L  G++  ++RGLGF  +           P + +
Sbjct: 421  FLNSKLENMTKSIKMLNKGSDMLDZVLQLGKKVGNQRGLGFNHKSAGRTTMTEFVPAKNS 480

Query: 481  EISRMS---------MKSLNKRTRRICYFCG----------------------------- 540
              + MS          +  +KR +  C++CG                             
Sbjct: 481  TGATMSQHRSRHHGTQQKRSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQGSSSGRKM 540

Query: 541  ------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK 600
                                    WY DSGC RHMTG  +F  ++  C    V F DG K
Sbjct: 541  MWVPKHKIVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSK 600

Query: 601  GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL 660
            GKI G G +   GLP L  V L++GL  NLISISQLCD+       KS  +  ++    L
Sbjct: 601  GKITGMGKLVHEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVL 660

Query: 661  -----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLP 720
                                   C  SK +E  +WH+R G L    + K+    A+  +P
Sbjct: 661  MKGSRSKDNCYLWTPQESSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIP 720

Query: 721  PLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVC 780
             L       C EC +GKQVK  H+ +   +TS +LELLH+DLMGPMQ +SLG KR   V 
Sbjct: 721  NLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVV 780

Query: 781  VDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDN 840
            VDDFSR+TW+  +          K  SL   +EK+  I RI++D+GREFEN  F EF  +
Sbjct: 781  VDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTS 840

Query: 841  EGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL 900
            EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP   W EA+NTAC+IHNRV L
Sbjct: 841  EGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTL 900

Query: 901  RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAY 960
            R GT TT YE+WKGRKP VK+FHIFGS C+IL+DR+ RR  D KSD GIFLGYS NSRAY
Sbjct: 901  RRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAY 960

Query: 961  RVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRVQL 1020
            RV+N  ++TVMESINV++DDL     ++++++                     D    + 
Sbjct: 961  RVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEP 1020

Query: 1021 ILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISA 1080
             +   D  P   I K +P   IIGD +  + TR +E     ++VSN C+ S +EP  +  
Sbjct: 1021 NINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSRE----IEIVSNSCFVSKIEPKNVKE 1080

Query: 1081 ALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR------ 1140
            AL+DE WI AMQEEL QFKRN+VWEL+P+P   N+IGTKWIFKNK +EEG + R      
Sbjct: 1081 ALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLV 1140

Query: 1141 ----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA 1200
                                  ++IRLLL  AC  +FKL+QMDVKS FLNGYL EE YV 
Sbjct: 1141 AQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVE 1200

Query: 1201 QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGT 1260
            QPKGFVDP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G  D+T+F+ +   
Sbjct: 1201 QPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAE 1260

Query: 1261 DFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFFSQ 1316
            + +I QIYVDDI+FGG S+            EFEMS+VGELT+FL  Q+KQ    IF SQ
Sbjct: 1261 NLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQ 1320

BLAST of Pay0004819 vs. NCBI nr
Match: AAO73527.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 706/1580 (44.68%), Postives = 913/1580 (57.78%), Query Frame = 0

Query: 1    MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV 60
            M+  +EG   +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P   D   +  
Sbjct: 1    MNMEKEGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT 60

Query: 61   --RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTCKSAKAAWDILEI------ 120
               K E  WTK+ED+  +GNS+ LNALFN V+ NIF+LINTC  AK AW+IL+I      
Sbjct: 61   DELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTS 120

Query: 121  ---------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLP 180
                     L ++FE L+M E+E I +F++ +L+IAN   ALGE++ D KLVRK+LRSLP
Sbjct: 121  KVKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180

Query: 181  FKFNMKVTAIKEANDLSKMKLDELFGQSRI--------------------SDTSSSGHY- 240
             +F+MKVTAI+EA D+  M++DEL G  +                     +D      Y 
Sbjct: 181  KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240

Query: 241  ---------------------------RKKEHERGKGTEASKSDKF----------GKGI 300
                                       R+K H +    +  K  K+           KGI
Sbjct: 241  LDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPSHSKGI 300

Query: 301  RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENV 360
            +CH CEG+GHI  EC T+LK+ +KG+    SD E   ESD +    AL  I      E  
Sbjct: 301  QCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIF-----ETA 360

Query: 361  QTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----IQDLVEENQSFLSSIVTLKEE 420
            +      S  + ++  A  RK     E ILQQ+ +    I DL  E ++    I  LK E
Sbjct: 361  EDSSDTDSEITFDELAASYRKLCIKSEKILQQEAQLKKVIADLEAEKEAHEEEISELKGE 420

Query: 421  LAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR 480
            +     + E + K  +M   G+  LD++L  G+ A ++RGLGF  +           P +
Sbjct: 421  VGFLNSKLETMKKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKFAGRTTMTEFVPAK 480

Query: 481  ---GTEISRM------SMKSLNKRTRRICYFCG--------------------------- 540
               GT +S+       + +  +KR +  C++CG                           
Sbjct: 481  NRTGTTMSQHLSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRK 540

Query: 541  --------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG 600
                                      WY DSGC RHMTG  +F  ++  C    V F DG
Sbjct: 541  KMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDG 600

Query: 601  GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKV 660
             KGKIIG G +   GLP L  V L++GL ANLISISQLCD+       KS  +  ++   
Sbjct: 601  SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 660

Query: 661  TL-----------------------CNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIID 720
             L                       C  SK +E  +WH+R G L    + K+    A+  
Sbjct: 661  VLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 720

Query: 721  LPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVV 780
            +P L       C EC +GKQVK  H+ +   +TS +LELLH+DLMGPMQ +SLG KR   
Sbjct: 721  IPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 780

Query: 781  VCVDDFSRYTWIKHV----------KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFY 840
            V VDDFSR+TW+  +          K  SL   +EK+  I RI++D+GREFEN  F EF 
Sbjct: 781  VVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFC 840

Query: 841  DNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV 900
             +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP   W EA+NTAC+IHNRV
Sbjct: 841  TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 900

Query: 901  ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSR 960
             LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR  D KSD GIFLGYS NSR
Sbjct: 901  TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 960

Query: 961  AYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------------------DDKLRV 1020
            AYRV+N  ++TVMESINV++DDL     ++++++                     D    
Sbjct: 961  AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLGDNVADAAKSGENAENSDSATD 1020

Query: 1021 QLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTI 1080
            +  +   D    T I K +P   IIGD +  + TR +E     ++VSN C+ S +EP  +
Sbjct: 1021 ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKIEPKNV 1080

Query: 1081 SAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---- 1140
              AL+DE WI AMQEEL QFKRN+VWEL+P+P   N+IGTKWIFKNK +EEG + R    
Sbjct: 1081 KEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKAR 1140

Query: 1141 ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY 1200
                                    ++IRLLL  AC  +FKL+QMDVKS FLNGYL EEVY
Sbjct: 1141 LVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVY 1200

Query: 1201 VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQ 1260
            V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G  D+T+F+ + 
Sbjct: 1201 VEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQD 1260

Query: 1261 GTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGELTFFLRFQIKQENIGIFF 1316
              + +I QIYVDDI+FGG S+            EFEMS+VGELT+FL  Q+KQ    IF 
Sbjct: 1261 AENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFL 1320

BLAST of Pay0004819 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-58
Identity = 151/504 (29.96%), Postives = 240/504 (47.62%), Query Frame = 0

Query: 830  SSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF 889
            +S  I DI S+ ++ +K    Y   +  VC   + EP+T + A     W  AM +E+   
Sbjct: 53   ASLTIHDI-SQFLSYEKVSPLYHSFL--VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAM 112

Query: 890  KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR------------------------ 949
            +    WE+   PP    IG KW++K K + +G + R                        
Sbjct: 113  ETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSP 172

Query: 950  ----KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFV----DPVHQDHV 1009
                 +++L+L+ +    F L Q+D+ + FLNG L EE+Y+  P G+     D +  + V
Sbjct: 173  VCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAV 232

Query: 1010 YKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILF 1069
              L+K++YGLKQA R W+ + S  L+  G+ +  +D T F+    T FL V +YVDDI+ 
Sbjct: 233  CYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIII 292

Query: 1070 GGTSSGE-----------FEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMD 1129
               +              F++  +G L +FL  +I +   GI   Q KYA +L+ + G+ 
Sbjct: 293  CSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLL 352

Query: 1130 KARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADP 1189
              +    P    +  +  + G+ VD   YR +IG L+YL  +R DI+FAV   +++   P
Sbjct: 353  GCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 412

Query: 1190 RTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGN 1249
            R +H     +IL YI GT   G++Y+      L    DA +  C D R+ST+G C FLG 
Sbjct: 413  RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGT 472

Query: 1250 NVTACFSKKQ---------------NSYYSQLLWMKQMLDEYRITQSS-MILYCDYLSAI 1275
            ++ +  SKKQ               +    +++W+ Q   E ++  S   +L+CD  +AI
Sbjct: 473  SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 532

BLAST of Pay0004819 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-28
Identity = 71/198 (35.86%), Postives = 111/198 (56.06%), Query Frame = 0

Query: 1030 IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKN 1089
            +YVDDIL  G+S           S  F M  +G + +FL  QIK    G+F SQ KYA+ 
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1090 LISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGV 1149
            +++  GM   +   TP    L  +  T  +  D + +RSI+G+L YLT +RPDI++AV +
Sbjct: 65   ILNNAGMLDCKPMSTPLPLKLNSSVST-AKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 1150 CARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTS 1209
              +   +P  +     KR+L+Y+ GT  +G++   ++   +    D+DWAGCT  R+ST+
Sbjct: 125  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 184

Query: 1210 GGCFFLGNNVTACFSKKQ 1217
            G C FLG N+ +  +K+Q
Sbjct: 185  GFCTFLGCNIISWSAKRQ 201

BLAST of Pay0004819 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.9e-10
Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 0

Query: 1123 LYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGN 1182
            +YLT +RPD+ FAV   +++ +  RT+ +    ++L Y+ GT   G++Y+  +   L   
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1183 YDADWAGCTDDRKSTSGGC-----FFLG 1206
             D+DWA C D R+S +G C     +FLG
Sbjct: 61   ADSDWASCPDTRRSVTGFCSLVPLWFLG 88

BLAST of Pay0004819 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 65.5 bits (158), Expect = 3.7e-10
Identity = 36/93 (38.71%), Postives = 49/93 (52.69%), Query Frame = 0

Query: 841 IITRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM 900
           ++TR K    K   K    +  T   EP ++  AL D  W  AMQEEL    RN+ W L+
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 901 PKPPYANIIGTKWIFKNKMDEEGRVIRKTIRLL 932
           P P   NI+G KW+FK K+  +G + R   RL+
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLV 93

BLAST of Pay0004819 vs. TAIR 10
Match: AT4G05360.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-06
Identity = 59/193 (30.57%), Postives = 84/193 (43.52%), Query Frame = 0

Query: 220 KFGKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTM 279
           K  KG RC EC+GF H+ +ECA  +K K+K  +  +SD E   +SDD +    L++  T 
Sbjct: 373 KSSKGKRCFECKGFRHMCSECANLMKEKEKKFI--MSDSE--IDSDDGEELKNLVAFTTF 432

Query: 280 NDEENVQTHDQPKSNNST----------EDAEDRKKTKDQEVILQQQERIQD-------- 339
                  +   P S ++T              D  ++ D ++ +  +E  ++        
Sbjct: 433 ESSIASASASGPTSASATGSTSASATGPATGSDNDQSDDDDLSISDEEFAENYKALYEHC 492

Query: 340 --LVEENQSFLSS--------IVTLK--EELAETKHQFEELLKFARMPTNGTSKLDDILD 383
             +VEEN              + TLK   E  E   Q EE  K  RM  NGT KL  IL 
Sbjct: 493 VKVVEENSVLTKEKLKLEAKVVKTLKFAAEKEEEASQLEETQKNLRMLNNGTKKLGHILS 552

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109785.1e-9727.58Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041465.3e-8626.31Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT948.2e-7934.83Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.2e-7735.14Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P925191.9e-2735.86Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5A7V0460.0e+0065.71Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G... [more]
A0A5D3C7780.0e+0082.26Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G... [more]
Q84VI40.0e+0044.62Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Q84VH60.0e+0044.42Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Q84VH80.0e+0044.68Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0059225.10.0e+0065.71gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYK07190.10.0e+0082.26gag-pol polyprotein [Cucumis melo var. makuwa][more]
AAO73521.10.0e+0044.62gag-pol polyprotein [Glycine max][more]
AAO73529.10.0e+0044.42gag-pol polyprotein [Glycine max][more]
AAO73527.10.0e+0044.68gag-pol polyprotein [Glycine max][more]
Match NameE-valueIdentityDescription
AT4G23160.11.7e-5829.96cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.4e-2835.86DNA/RNA polymerases superfamily protein [more]
ATMG00240.12.9e-1035.23Gag-Pol-related retrotransposon family protein [more]
ATMG00820.13.7e-1038.71Reverse transcriptase (RNA-dependent DNA polymerase) [more]
AT4G05360.11.9e-0630.57Zinc knuckle (CCHC-type) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 926..1095
e-value: 9.9E-37
score: 126.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 568..736
e-value: 6.0E-35
score: 122.3
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 504..560
e-value: 5.8E-8
score: 32.5
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 79..188
e-value: 1.8E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..308
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 517..791
coord: 925..1170
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1184..1300
e-value: 3.39366E-49
score: 169.186
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 563..727
score: 14.21727
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 937..1267
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 577..736

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0004819.1Pay0004819.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding