Pay0004651 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004651
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	repetitive proline-rich cell wall protein 3-like
Location	chr05: 9080982 .. 9081514 (-)
RNA-Seq Expression	Pay0004651
Synteny	Pay0004651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGCCACGATGTTTCTCAAATACTTTCTTCTCCTTCTTCTCGCAGCTGTGCTTCTTTCCACAACTCAAGCCCTGAAACACCCCTCCACCTCCGACCAAGAAGTGATTCCGACCACCGATGTCACCCAAGGAACGCTCCCGACCACCATCGCCGATCCGAATGAAGAATCCAAATTCTACAGGAGGCCATTTCCCTACAAGAAGCCTTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAATACCCACCATCTTCTCACTAAATGGCATCCCAAACCAAAGTTGAGTCCATGGACAATGTGTTATGTGTTTAATTTCTTTGATAAATAAGTGGTGCTATAAGCTCCAAGTTTTAGGGTAATACTAGAAAGTTCATGAAGTTGGCCTTTTGACTTATGTAATATGTGTTAATCCAAACTTCATATGTGTGATGTATGGATGTATTTTCTCTGTGTTATTGCTTCACTTATCGTTTAATAATCTAAAGTTTGAATGGATTTAATATTT

mRNA sequence

AAAAGCCACGATGTTTCTCAAATACTTTCTTCTCCTTCTTCTCGCAGCTGTGCTTCTTTCCACAACTCAAGCCCTGAAACACCCCTCCACCTCCGACCAAGAAGTGATTCCGACCACCGATGTCACCCAAGGAACGCTCCCGACCACCATCGCCGATCCGAATGAAGAATCCAAATTCTACAGGAGGCCATTTCCCTACAAGAAGCCTTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAATACCCACCATCTTCTCACTAAATGGCATCCCAAACCAAAGTTGAGTCCATGGACAATGTGTTATGTGTTTAATTTCTTTGATAAATAAGTGGTGCTATAAGCTCCAAGTTTTAGGGTAATACTAGAAAGTTCATGAAGTTGGCCTTTTGACTTATGTAATATGTGTTAATCCAAACTTCATATGTGTGATGTATGGATGTATTTTCTCTGTGTTATTGCTTCACTTATCGTTTAATAATCTAAAGTTTGAATGGATTTAATATTT

Coding sequence (CDS)

ATGTTTCTCAAATACTTTCTTCTCCTTCTTCTCGCAGCTGTGCTTCTTTCCACAACTCAAGCCCTGAAACACCCCTCCACCTCCGACCAAGAAGTGATTCCGACCACCGATGTCACCCAAGGAACGCTCCCGACCACCATCGCCGATCCGAATGAAGAATCCAAATTCTACAGGAGGCCATTTCCCTACAAGAAGCCTTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAATACCCACCATCTTCTCACTAA

Protein sequence

MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRPFPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH

Homology

[Close]

BLAST of Pay0004651 vs. ExPASy TrEMBL
Match: A0A5A7VEY7 (Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00050 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
          MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60

Query: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
          FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of Pay0004651 vs. ExPASy TrEMBL
Match: A0A1S3CE34 (repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC103499417 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
          MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60

Query: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
          FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of Pay0004651 vs. ExPASy TrEMBL
Match: A0A0A0LI79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.0e-35
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1   MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
           MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIPTTDVT G LPTTI DPNEESKFYRRP
Sbjct: 15  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 74

Query: 61  FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
            PYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 75  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 106

[Close]

BLAST of Pay0004651 vs. ExPASy TrEMBL
Match: A0A0A0LNP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176690 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.5e-32
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1   MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
           MF KYFLLLLLA VLL+TTQALKHP  S+QE IP+TD+T G LPTTI DPNEESKF+RRP
Sbjct: 15  MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 74

Query: 61  FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
            PYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 75  SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 106

[Close]

BLAST of Pay0004651 vs. ExPASy TrEMBL
Match: Q8H0R6 (Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.5e-32
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
          MF KYFLLLLLA VLL+TTQALKHP  S+QE IP+TD+T G LPTTI DPNEESKF+RRP
Sbjct: 1  MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 60

Query: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
           PYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of Pay0004651 vs. NCBI nr
Match: XP_008460638.1 (PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo] >KAA0065667.1 repetitive proline-rich cell wall protein 3-like [Cucumis melo var. makuwa] >TYK15518.1 repetitive proline-rich cell wall protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 4.3e-40
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
          MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60

Query: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
          FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of Pay0004651 vs. NCBI nr
Match: XP_004147144.2 (repetitive proline-rich cell wall protein 3 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-35
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1   MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
           MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIPTTDVT G LPTTI DPNEESKFYRRP
Sbjct: 15  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 74

Query: 61  FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
            PYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 75  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 106

[Close]

BLAST of Pay0004651 vs. NCBI nr
Match: NP_001267631.1 (uncharacterized protein LOC101210961 precursor [Cucumis sativus] >CAD44256.1 proline-rich protein [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 7.3e-32
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
          MF KYFLLLLLA VLL+TTQALKHP  S+QE IP+TD+T G LPTTI DPNEESKF+RRP
Sbjct: 1  MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 60

Query: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
           PYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of Pay0004651 vs. NCBI nr
Match: KAE8651815.1 (hypothetical protein Csa_006392, partial [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 7.3e-32
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1   MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
           MF KYFLLLLLA VLL+TTQALKHP  S+QE IP+TD+T G LPTTI DPNEESKF+RRP
Sbjct: 9   MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 68

Query: 61  FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 93
            PYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 69  SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 100

[Close]

BLAST of Pay0004651 vs. NCBI nr
Match: WP_219729224.1 (hypothetical protein, partial [Pectobacterium odoriferum])

HSP 1 Score: 122.9 bits (307), Expect = 1.5e-24
Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60
          MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIP TD    T  TT  DP+EESKFY++P
Sbjct: 7  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKP 66

Query: 61 FPYKKP-YKRPPYKKYPPYKKRPPYKKYPPSS 92
          + YK+P YKRPPYKKYPPYKK PPYKKYPPSS
Sbjct: 67 Y-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS 97

The following BLAST results are available for this feature:

BLAST of Pay0004651 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004651 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEY7	2.1e-40	100.00	Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CE34	2.1e-40	100.00	repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LI79	2.0e-35	90.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1	[more]
A0A0A0LNP2	3.5e-32	84.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176690 PE=4 SV=1	[more]
Q8H0R6	3.5e-32	84.78	Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1	[more]

BLAST of Pay0004651 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460638.1	4.3e-40	100.00	PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo] >KAA0...	[more]
XP_004147144.2	4.1e-35	90.22	repetitive proline-rich cell wall protein 3 [Cucumis sativus]	[more]
NP_001267631.1	7.3e-32	84.78	uncharacterized protein LOC101210961 precursor [Cucumis sativus] >CAD44256.1 pro...	[more]
KAE8651815.1	7.3e-32	84.78	hypothetical protein Csa_006392, partial [Cucumis sativus]	[more]
WP_219729224.1	1.5e-24	77.17	hypothetical protein, partial [Pectobacterium odoriferum]	[more]

BLAST of Pay0004651 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004651.1	Pay0004651.1	mRNA