Pay0004642 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004642
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	LEA_2 domain-containing protein
Location	chr08: 23872656 .. 23873838 (+)
RNA-Seq Expression	Pay0004642
Synteny	Pay0004642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAATAGAAATTTAATAAACTAGAAGGATGAAATTGAAAACCAACGTATAGGCGTAATAAATATTAATCCTTGCTAAAACATGAAAGAAGAAGAAGTAAATGGAGAAACACTTTTCTCCATCTACCTGTTTCCTACTCCAAAATTAATTTCAATTAGTTGAGAGTTAGAATAATCCCCAAATTTTCAAATGTCTCCATAAATTCCCAAATTCTCACTATTCTTCTCCCAAAATCTGCCATGGAAATCGCTTCTTCTTCCTCCTCTTCGATCAAAGACCCCAAATCCACTCAATCCGCCGCCGCCGCCGCCGCCGCCCGTTCCCGGAAACGCCGCAACACCTGCATCGGAATCTCCATCGCCATCCTCCTCCTCCTCATCATCTTAATCATCATTCTCGCCTTCACAGTCTTCAAAGCCAAACGTCCAATCACCACCGTCAATTCCGTTGCCCTAGCCGATCTCGACGTGTCGCTAAACCTAGCCAGAGTCTCCGTCGACATCAACGTCACTCTAATTGCCGGCATCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACAAGAACAGCACCGCGTTTTTGAATTACAGAGGGGAATTGGTCGGAGAAGCGCCGATTATGGCTGGAAAGATCGACGCAGGAGAGAGGAAGGAGATGAATATCACGCTGACGATTATGGCGGATCGGTTACTGAAGACGACAACGGTGTTTTCGGATGTAGTGGCGGGATCTATGCCGTTGAATACGTATGCGAGGATTTCAGGTAAGGTGAAGATTTTGGGGATTTTTAACATTCATGTGGTTTCAACTACGTCTTGTGATTTCAATGTGGATATATCGGAGAGGAAAGTTGGAGATCAACAGTGTAATTATCATACTAAGATCTGATTGATTGATTGATTGATTGATTGATTAAGCTTCTTCTTGTTTTGTTCTTATTGTTGTTCTTGGTAAATTATGAAAGAGATTTGTAGGGTGAATTAGGGGTGTTTGTAGAGTGTTGTAATTGATCGATTTGGGATTTAGTTACTATTTTTGTACTAAACTTCCTCTCTTATGTTTGCTGTTGTTTTTTAATGTAAAATTACAAATTTAATCCTAAACTGTGAGCATAGTATCGGTAATCGATTCCTCTGACTATGAAGAATACAAACAATTAATTGATATGGAATTAGGTGGTT

mRNA sequence

CTGAATAGAAATTTAATAAACTAGAAGGATGAAATTGAAAACCAACGTATAGGCGTAATAAATATTAATCCTTGCTAAAACATGAAAGAAGAAGAAGTAAATGGAGAAACACTTTTCTCCATCTACCTGTTTCCTACTCCAAAATTAATTTCAATTAGTTGAGAGTTAGAATAATCCCCAAATTTTCAAATGTCTCCATAAATTCCCAAATTCTCACTATTCTTCTCCCAAAATCTGCCATGGAAATCGCTTCTTCTTCCTCCTCTTCGATCAAAGACCCCAAATCCACTCAATCCGCCGCCGCCGCCGCCGCCGCCCGTTCCCGGAAACGCCGCAACACCTGCATCGGAATCTCCATCGCCATCCTCCTCCTCCTCATCATCTTAATCATCATTCTCGCCTTCACAGTCTTCAAAGCCAAACGTCCAATCACCACCGTCAATTCCGTTGCCCTAGCCGATCTCGACGTGTCGCTAAACCTAGCCAGAGTCTCCGTCGACATCAACGTCACTCTAATTGCCGGCATCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACAAGAACAGCACCGCGTTTTTGAATTACAGAGGGGAATTGGTCGGAGAAGCGCCGATTATGGCTGGAAAGATCGACGCAGGAGAGAGGAAGGAGATGAATATCACGCTGACGATTATGGCGGATCGGTTACTGAAGACGACAACGGTGTTTTCGGATGTAGTGGCGGGATCTATGCCGTTGAATACGTATGCGAGGATTTCAGGTAAGGTGAAGATTTTGGGGATTTTTAACATTCATGTGGTTTCAACTACGTCTTGTGATTTCAATGTGGATATATCGGAGAGGAAAGTTGGAGATCAACAGTGTAATTATCATACTAAGATCTGATTGATTGATTGATTGATTGATTGATTAAGCTTCTTCTTGTTTTGTTCTTATTGTTGTTCTTGGTAAATTATGAAAGAGATTTGTAGGGTGAATTAGGGGTGTTTGTAGAGTGTTGTAATTGATCGATTTGGGATTTAGTTACTATTTTTGTACTAAACTTCCTCTCTTATGTTTGCTGTTGTTTTTTAATGTAAAATTACAAATTTAATCCTAAACTGTGAGCATAGTATCGGTAATCGATTCCTCTGACTATGAAGAATACAAACAATTAATTGATATGGAATTAGGTGGTT

Coding sequence (CDS)

ATGGAAATCGCTTCTTCTTCCTCCTCTTCGATCAAAGACCCCAAATCCACTCAATCCGCCGCCGCCGCCGCCGCCGCCCGTTCCCGGAAACGCCGCAACACCTGCATCGGAATCTCCATCGCCATCCTCCTCCTCCTCATCATCTTAATCATCATTCTCGCCTTCACAGTCTTCAAAGCCAAACGTCCAATCACCACCGTCAATTCCGTTGCCCTAGCCGATCTCGACGTGTCGCTAAACCTAGCCAGAGTCTCCGTCGACATCAACGTCACTCTAATTGCCGGCATCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACAAGAACAGCACCGCGTTTTTGAATTACAGAGGGGAATTGGTCGGAGAAGCGCCGATTATGGCTGGAAAGATCGACGCAGGAGAGAGGAAGGAGATGAATATCACGCTGACGATTATGGCGGATCGGTTACTGAAGACGACAACGGTGTTTTCGGATGTAGTGGCGGGATCTATGCCGTTGAATACGTATGCGAGGATTTCAGGTAAGGTGAAGATTTTGGGGATTTTTAACATTCATGTGGTTTCAACTACGTCTTGTGATTTCAATGTGGATATATCGGAGAGGAAAGTTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

Protein sequence

MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKAKRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI

Homology

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BLAST of Pay0004642 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.9e-105
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 217
           LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

[Close]

BLAST of Pay0004642 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.0e-98
Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSS IKDPKSTQS  AAAA RSRKRRNTCIGISIAILLLLII+IIILAFTVFKA
Sbjct: 1   MEIASSSSSLIKDPKSTQS-TAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLA VSVDINVTLIA IAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVF+D VAGSMPLNTY RISGKVKI
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 217
           LGIFNIHVVS+TSCDFNVDISERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

[Close]

BLAST of Pay0004642 vs. ExPASy TrEMBL
Match: A0A5A7UIZ3 (LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold438G00110 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.3e-80
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 176
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 175

[Close]

BLAST of Pay0004642 vs. ExPASy TrEMBL
Match: A0A5D3C2Q6 (LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00590 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.4e-78
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSSSIKDPKSTQS AAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQS-AAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 176
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 174

[Close]

BLAST of Pay0004642 vs. ExPASy TrEMBL
Match: A0A6J1DQ35 (uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023175 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.7e-78
Identity = 167/217 (76.96%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASS++   KD KST      AAARSR+RRN CIG S+  LLLL+ILI+ILAFTVFKA
Sbjct: 1   MEIASSAT---KDLKST-----TAAARSRRRRNICIGASLGALLLLVILILILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           +RPIT +NSVALADL VSL++ARV+VDINVTLIA +A+TNPNKVGFSY NSTA LNYRGE
Sbjct: 61  RRPITAINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLL-KTTTVFSDVVAGSMPLNTYARISGKVK 180
           LVGEAPI AG+IDA + K+MNITLTIMADRLL K+  VFSDVVAGSMPLNTY RISG+VK
Sbjct: 121 LVGEAPIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVK 180

Query: 181 ILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 217
           ILGIF IHVVSTTSCD  +DIS RK+GDQQCNYHTKI
Sbjct: 181 ILGIFKIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 209

[Close]

BLAST of Pay0004642 vs. NCBI nr
Match: XP_008463309.1 (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 391.7 bits (1005), Expect = 4.0e-105
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 217
           LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

[Close]

BLAST of Pay0004642 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 6.2e-98
Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSS IKDPKSTQS  AAAA RSRKRRNTCIGISIAILLLLII+IIILAFTVFKA
Sbjct: 1   MEIASSSSSLIKDPKSTQS-TAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLA VSVDINVTLIA IAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVF+D VAGSMPLNTY RISGKVKI
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 217
           LGIFNIHVVS+TSCDFNVDISERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

[Close]

BLAST of Pay0004642 vs. NCBI nr
Match: XP_038882665.1 (uncharacterized protein LOC120073854 [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 7.3e-91
Identity = 188/216 (87.04%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSS+   KDPKSTQS    AAARSR+RRNTCIGISIA ++LL++LI+ILAFTVFKA
Sbjct: 1   MEIASSSN---KDPKSTQS---IAAARSRRRRNTCIGISIATVVLLVVLIVILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPIT +NSV LADLDVSLNLARVSVDINVTLIA +AITNPNKVGFSY NSTAFLNYRGE
Sbjct: 61  KRPITAINSVTLADLDVSLNLARVSVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180
           LVGEAPI AG+IDAG+RKEMNITLTIMADRLLKTTTVFSDVVAG+MPLNTY RISGKV+I
Sbjct: 121 LVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTTTVFSDVVAGTMPLNTYTRISGKVRI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 217
           LGIFNIHVVSTTSCDFNV ISERKVGDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVSISERKVGDQQCNYHTKI 210

[Close]

BLAST of Pay0004642 vs. NCBI nr
Match: KAA0055893.1 (uncharacterized protein E6C27_scaffold438G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-79
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 176
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 175

[Close]

BLAST of Pay0004642 vs. NCBI nr
Match: TYK06201.1 (uncharacterized protein E5676_scaffold287G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 7.1e-78
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60
           MEIASSSSSSIKDPKSTQS AAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQS-AAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120
           KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 176
           LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARIS 174

[Close]

BLAST of Pay0004642 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-47
Identity = 98/202 (48.51%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 17  TQSAAAAAAARSRKRRN--TCIGISIAILLLLIILIIILAFTVFKAKRPITTVNSVALAD 76
           TQSA    A + R++RN   CI  +I ++LL+ I+I+ILAFT+FK KRP TT++SV +  
Sbjct: 34  TQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDR 93

Query: 77  LDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDA 136
           L  S+N   + V +N+TL   +++ NPN++GFSY +S+A LNYRG+++GEAP+ A +I A
Sbjct: 94  LQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAA 153

Query: 137 GERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKILGIFNIHVVSTTSC 196
            +   +NITLT+MADRLL  T + SDV+AG +PLNT+ +++GKV +L IF I V S++SC
Sbjct: 154 RKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSC 213

Query: 197 DFNVDISERKVGDQQCNYHTKI 217
           D ++ +S+R V  Q C Y TK+
Sbjct: 214 DLSISVSDRNVTSQHCKYSTKL 235

[Close]

BLAST of Pay0004642 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 65/199 (32.66%), Postives = 104/199 (52.26%), Query Frame = 0


Query: 14  PKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKAKRPITTVNSVALA 73
           P S +SA+        + R  C     A  L+L  +++ L FTVF+ K PI  +N V + 
Sbjct: 17  PVSDESASNIKNTHRSRNRIKCSICVTATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVN 76

Query: 74  DLDVSLNLARVS-VDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKI 133
            LD      +V  +  N+++I  +++ NPN   F Y N+T  + Y+G LVGEA  + GK 
Sbjct: 77  GLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKA 136

Query: 134 DAGERKEMNITLTIMADRLLKTTTVFSDVV-AGSMPLNTYARISGKVKILGIFNIHVVST 193
                  MN+T+ IM DR+L    +  ++  +G + + +Y R+ GKVKI+GI   HV   
Sbjct: 137 RPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVK 196

Query: 194 TSCDFNVDISERKVGDQQC 211
            +C   V+I+ + + D  C
Sbjct: 197 MNCTMAVNITGQAIQDVDC 215

[Close]

BLAST of Pay0004642 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-13
Identity = 54/188 (28.72%), Postives = 89/188 (47.34%), Query Frame = 0


Query: 30  KRRNTCIGISIAILLLLIILIIILAFTVFKAKRPITTVNSVALADLDVSLNLARVSVDIN 89
           KRR  CI   I  +L +I +  ++   VFK K PI    S  +  +  +++L    V +N
Sbjct: 3   KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLP-YEVQLN 62

Query: 90  VTLIAGIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDAGERKEMNITLTIMAD 149
            TL   + + NPN   F YK     + YR  LVG   + +  + A     +   L +  D
Sbjct: 63  FTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLD 122

Query: 150 RLLKTT-TVFSDVVAGSMPLNTYARISGKVKILGIFNIHVVSTTSCDFNVDISERKVGDQ 209
           + +     +  DV+ G + + T A++ GK+ +LGIF I + S + C+  +      V DQ
Sbjct: 123 KFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQ 182

Query: 210 QCNYHTKI 217
            C+  TK+
Sbjct: 183 VCDLKTKL 189

[Close]

BLAST of Pay0004642 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 27  RSRKRRN-TCIGISIAILLLLIILIIILAFTVFKAKRPITTVNSVALADLDVSLNLARVS 86
           RS  R N     ++   LL+L+++++++ FTVFK K P  +VN+V L    VS N A   
Sbjct: 9   RSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA--- 68

Query: 87  VDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDAGERKEMNITLT 146
              N +    +A+ NPN+  FS+ +S+  L Y G  VG   I AGKID+G  + M  T T
Sbjct: 69  ---NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATFT 123

The following BLAST results are available for this feature:

BLAST of Pay0004642 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJB5	1.9e-105	100.00	uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=...	[more]
A0A0A0L094	3.0e-98	94.44	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ...	[more]
A0A5A7UIZ3	6.3e-80	100.00	LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3C2Q6	3.4e-78	99.43	LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1DQ35	7.7e-78	76.96	uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Pay0004642 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463309.1	4.0e-105	100.00	PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo]	[more]
XP_004142665.1	6.2e-98	94.44	uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ...	[more]
XP_038882665.1	7.3e-91	87.04	uncharacterized protein LOC120073854 [Benincasa hispida]	[more]
KAA0055893.1	1.3e-79	100.00	uncharacterized protein E6C27_scaffold438G00110 [Cucumis melo var. makuwa]	[more]
TYK06201.1	7.1e-78	99.43	uncharacterized protein E5676_scaffold287G00590 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0004642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54200.1	4.1e-47	48.51	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G46150.1	1.1e-20	32.66	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G05975.1	1.0e-13	28.72	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G64450.1	1.2e-09	37.19	Glycine-rich protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 96..186 e-value: 6.2E-10 score: 39.5
None	No IPR available	GENE3D	2.60.40.1820		coord: 51..205 e-value: 2.9E-10 score: 42.1
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 25..215
None	No IPR available	PANTHER	PTHR31852:SF122	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 25..215
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 60..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004642.1	Pay0004642.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane