Pay0004627 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004627
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr07: 6553856 .. 6556895 (-)
RNA-Seq Expression	Pay0004627
Synteny	Pay0004627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAGAACTCTGAAGAAGACTTATTGGTGGCCTGGTATGAAGTGAGAGATAGCTGAATATGTCGATAGATGTTTGATCTGTCAACAAGTTAAACCAGTGAGGCAGAGGCCGGGAGGACTCCTTAATCCCTTGCCAGTGCCAGACTGGAAGTGGGAGCATATTACCATGGATTTTCTATTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACCCACCAAGACAGCGCGGTTTATACCGATTAAAGCAACGTCTACACTAGATCAGCTAGCTAAGTTATATGTCGACAGGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCTGAGGTTTACTTCTAAGTTTTGGCCTTGTGTTCAAAAAACAATGGGAACAAAGTTGAAGTTCAGTACCGCGTTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAAGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAGTTGGGATACCCACTTATCACTTATGGAGTTCGCTTATAATAACAGCTACCAGTCTAGTATCAGCATGGCACCATTCGAGGCTTTGTATGGCAGACCATGCAGGACCCCTGTGTGCTGGATCGAAGTGGGAGAACAAAATTTAGTTGGTCCTAAGTTAGTACAAGTTACGTCAGACAATATTAAGCTGATTAGAGAAAATCTAAAAATAGCTCAGAATCGACAGAAGAGCTATGCAGATAAGCGACGAAGAGACTTAGAGTTCCAAATTGGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTCTTCGTTTTGGGAGGAAAGGTAAGTTGAGTCCTAGATATATTGGTCTGTACCAGATAATAGAACGAGTTGGACCAGCAGCCTATAAACTTGAATTGTCAGCGGAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATGTTGAGGAAATATATTTCAGATCTATCACATGTGTTGCAAGTACAACCAATTGAACTGAAAGAAGACTTGAGTTATAGAGAGAAAGCAGTTCAGATCCTCAACAGGAAGAACCAAGTTTTGAGGAACAAAACGATCCGGCTCGTGAAAGTTCTTTGGAGACATCATGGAATAGAGGATGCAACCTGGGAGTCAGAAGATCAAATAAGGAGGAGTTACCCGACACTCTTCACCTAAGGACTTCTAAATTTCAAGGACGAAATTTCATAAGGGGAGGTAAGTTGTAAACCCGAGATTTCCCTAGGATCATTTTCTCTTTTCATCTATATTTATGATTACTAAGTTAAAAGAAGAAAGAAAAGAAAAGAAAGGAAGTGGAATTGGACAGCACAAAGCCCACCACCGACAAGCTCATTTTTAAGTCCAATTTCATTTCATTTCTCCATCATTTTCCATCCAAACTTTCAGAGCACTTTAAGGAGAGAGTGAAAAAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTAAAGAAGATAGGAAAAAGTTCATGCAAAGCTAGCCATTGCAGAATCTTGGTGCAACTGTCAACCTCTGGTTTGTTTTGTTGGGTTTGAGCTATCCAGAAGGAACTAAGCGGTAAGGTTTGATTTTCTTGAAAGTTAGTTCATTTTCCAACAAATTTCATGAAGGAAGCTTGAGCTGAATAGTATGAGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGAGCAAACTAGGAGGATTTCTGGTGTTCTCTGATCCTTTGAGTATTCTGGAAAAGCACAAGTCGAATCAGAAGCTCTATTTGATATGGTTGGAAAGCTTGTTCAATATCCTACAATTTTGCATGAAGATTTTGTGAGCCAAAAATGACTTTAAGTATCTTTTAAAGTAAAGCATGTGTTAGCAAATATTGTATAATGATTTAAAGTTTTTCACGAGCAAGCTGAATAAACTTGATTTTACAAAAGATAACGATAAACAAGCATGTTTAAATGTTTTCGTGTGACTTCGTGGAGATTTCCATTGACTACATGACTGAGATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTTCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAATGTTGGGCGGGCCCCACTACGATAAAGACGATGGGAGTGCTGGGCGTGCCCTACACCACGTAGATCGATCATGTTAGTTAAAACGTTTGATGTATTTGTTATGCCTTGCTAGATTTTTTATGACGAACTTGGAAGATATTTTAGAAAGCCTTATTTATTACACGTTTATGTTAAATGCTTTGATTGAGCATATTTATACGTCTAAAGGTTTATCACATGTTTTGACGTTCATATTTAGAGTTTTAAATTTAGTCACTCACTGGGCCTCGTAGCTCATTCTTTTCAAAATGTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTACCTAATACACTGCCAACATCTGCTGAAAGTTCCAGATCAAACTCCAGTACGTGGTTGGAGTTGTAATTTGAGTTTGTTCATGTTGAAATGTTTTGCAAGGTTTGTATAATATCGTCCTAGAGATCGTGGTCGTAAAACTCTAGTTGTATAGATTTTGGTCGTGATATTTATATCAGGTTATTTTACAAACCAAGTGATGTCAGGACTGCATCTCGTGTATGTTGGGAAGGTTTTCGTGGATTCCGTTGTGTGGTGTTCCATGTTGAATATTCTATATCTAAGATTGGTATGTTTATCAGGTTTAACATTTCAGTAGGGTCAACAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGACAGCAGGTGGTCCGGGAGGGGGGTGTGACATCAAGTGTAGGCTTTCTCTTTCTGACTTGGTTGATAGACTTGAATCTTTTTAGTACGTTTGGACATAATATCTTATAAAGAAGATAAAGGACTCAAATTCTTCTCAAAAATCATATTACATTGAGCCTTGTTCATAGCACAAGTCCAAGAAAAGAAAGAAAAGGATGA

mRNA sequence

ATGTATAGAACTCTGAAGAAGACTTATTGGTGGCCTGTTAAACCAGTGAGGCAGAGGCCGGGAGGACTCCTTAATCCCTTGCCAGTGCCAGACTGGAAGTGGGAGCATATTACCATGGATTTTCTATTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACCCACCAAGACAGCGCGGTTTATACCGATTAAAGCAACGTCTACACTAGATCAGCTAGCTAAGTTATATGTCGACAGGATTGCTTTGTATGGCAGACCATGCAGGACCCCTGTGTGCTGGATCGAAGTGGGAGAACAAAATTTAGTTGGTCCTAAGTTAGTACAAGTTACGTCAGACAATATTAAGCTGATTAGAGAAAATCTAAAAATAGCTCAGAATCGACAGAAGAGCTATGCAGATAAGCGACGAAGAGACTTAGAGTTCCAAATTGGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTCTTCGTTTTGGGAGGAAAGATCTATCACATGTGTTGCAAGTACAACCAATTGAACTGAAAGAAGACTTGAGTTATAGAGAGAAAGCAGTTCAGATCCTCAACAGGAAGAACCAAAGCACAGGATTTTCGAGCAAACTAGGAGGATTTCTGGTGTTCTCTGATCCTTTGAGTATTCTGGAAAAGCACAAGTCGAATCAGAAGCTCTATTTGATATGGTTGGAAAGCTTAAAAGGATGA

Coding sequence (CDS)

ATGTATAGAACTCTGAAGAAGACTTATTGGTGGCCTGTTAAACCAGTGAGGCAGAGGCCGGGAGGACTCCTTAATCCCTTGCCAGTGCCAGACTGGAAGTGGGAGCATATTACCATGGATTTTCTATTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACCCACCAAGACAGCGCGGTTTATACCGATTAAAGCAACGTCTACACTAGATCAGCTAGCTAAGTTATATGTCGACAGGATTGCTTTGTATGGCAGACCATGCAGGACCCCTGTGTGCTGGATCGAAGTGGGAGAACAAAATTTAGTTGGTCCTAAGTTAGTACAAGTTACGTCAGACAATATTAAGCTGATTAGAGAAAATCTAAAAATAGCTCAGAATCGACAGAAGAGCTATGCAGATAAGCGACGAAGAGACTTAGAGTTCCAAATTGGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTCTTCGTTTTGGGAGGAAAGATCTATCACATGTGTTGCAAGTACAACCAATTGAACTGAAAGAAGACTTGAGTTATAGAGAGAAAGCAGTTCAGATCCTCAACAGGAAGAACCAAAGCACAGGATTTTCGAGCAAACTAGGAGGATTTCTGGTGTTCTCTGATCCTTTGAGTATTCTGGAAAAGCACAAGTCGAATCAGAAGCTCTATTTGATATGGTTGGAAAGCTTAAAAGGATGA

Protein sequence

MYRTLKKTYWWPVKPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRIALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRRDLEFQIGEQVFLKLSPWKGVLRFGRKDLSHVLQVQPIELKEDLSYREKAVQILNRKNQSTGFSSKLGGFLVFSDPLSILEKHKSNQKLYLIWLESLKG

Homology

[Close]

BLAST of Pay0004627 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 14   KPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVDRPTKTARFIPIKA 73
            K    +P G L P+P  +  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   
Sbjct: 964  KSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTK 1023

Query: 74   TSTLDQLAKLYVDR-IALYGRP 95
            + T +Q A+++  R IA +G P
Sbjct: 1024 SITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0004627 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 14   KPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVDRPTKTARFIPIKA 73
            K    +P G L P+P  +  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   
Sbjct: 964  KSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTK 1023

Query: 74   TSTLDQLAKLYVDR-IALYGRP 95
            + T +Q A+++  R IA +G P
Sbjct: 1024 SITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0004627 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 14   KPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVDRPTKTARFIPIKA 73
            K    +P G L P+P  +  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   
Sbjct: 964  KSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTK 1023

Query: 74   TSTLDQLAKLYVDR-IALYGRP 95
            + T +Q A+++  R IA +G P
Sbjct: 1024 SITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0004627 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 14   KPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVDRPTKTARFIPIKA 73
            K    +P G L P+P  +  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   
Sbjct: 964  KSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTK 1023

Query: 74   TSTLDQLAKLYVDR-IALYGRP 95
            + T +Q A+++  R IA +G P
Sbjct: 1024 SITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0004627 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 14   KPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVDRPTKTARFIPIKA 73
            K    +P G L P+P  +  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   
Sbjct: 964  KSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTK 1023

Query: 74   TSTLDQLAKLYVDR-IALYGRP 95
            + T +Q A+++  R IA +G P
Sbjct: 1024 SITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0004627 vs. ExPASy TrEMBL
Match: A0A1S3CAP1 (uncharacterized protein LOC103498328 OS=Cucumis melo OX=3656 GN=LOC103498328 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.7e-105
Identity = 200/253 (79.05%), Postives = 212/253 (83.79%), Query Frame = 0


Query: 1   MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
           MYRTLKKTYWWP                  VKPVRQR GGLLNPLP+P+WKWEHIT+DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRIALYGRPCRTPVCWI 120
           FGLP TSRGYDGIWVIVDR TK ARFIPIKATSTLDQLAKLYVDRI       +  VCW 
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRIT-----TQDSVCWN 120

Query: 121 EVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRRDLEFQIGEQVFLKLSPW 180
           EVGE+ LVGP+L+QVT DNIKLIRENLKIAQ+RQKSYADKRRRDLEFQIGEQVFLKLSPW
Sbjct: 121 EVGERKLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQVFLKLSPW 180

Query: 181 KGVLRFGRKDLSHVLQVQPIELKEDLSYREKAVQILNRKNQSTGFSSKLGGFLVFSDPLS 236
           +GVLRFGRKD SHVLQVQP ELKEDLSYRE+AVQIL+RK QSTGFSSK GGFLVFS+ LS
Sbjct: 181 RGVLRFGRKDPSHVLQVQPFELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSEALS 240

[Close]

BLAST of Pay0004627 vs. ExPASy TrEMBL
Match: A0A5D3DXH2 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001290 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 5.6e-93
Identity = 200/345 (57.97%), Postives = 200/345 (57.97%), Query Frame = 0


Query: 1   MYRTLKKTYWWPVKPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVD 60
           MYRTLKKTYWW   PVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVD
Sbjct: 55  MYRTLKKTYWW---PVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVD 114

Query: 61  RPTKTARFIPIKATSTLDQLAKLYVDRI-------------------------------- 120
           RPTKTARFIPIKATSTLDQLAKLYVDRI                                
Sbjct: 115 RPTKTARFIPIKATSTLDQLAKLYVDRIVSQHGVPVSIVSDRDLRFTSKFWPCVQKTMGT 174

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 175 KLKFSTAFHPQTDGQSERTIQTLEDMLRACVLQFKGSWDTHLSLMEFAYNNSYQSSISMA 234

Query: 181 ---ALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRR 204
              ALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRR
Sbjct: 235 PFEALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRR 294

[Close]

BLAST of Pay0004627 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.8e-83
Identity = 170/263 (64.64%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 1    MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
            MYRTLKKTYWWP                  VKP+RQRPGGLLN LPVP+WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DR TKTARFIPIKA STLDQLAKLYVDRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRRDLEFQIGE 180
              RTPVCW EVGE+ LV P+LVQVTSDNIKLI+ENLKIAQ+RQKSY DKRRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWKGVLRFGRKDLSHVLQVQPIELKEDLSYREKAVQILNRKNQSTGFSSKLGG 237
            QVFLKLS W+GVLRF RK+                                   SSK GG
Sbjct: 1363 QVFLKLSSWRGVLRFERKE--------------------------------HRISSKPGG 1413

[Close]

BLAST of Pay0004627 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.8e-83
Identity = 170/263 (64.64%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 1    MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
            MYRTLKKTYWWP                  VKP+RQRPGGLLN LPVP+WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DR TKTARFIPIKA STLDQLAKLYVDRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRRDLEFQIGE 180
              RTPVCW EVGE+ LV P+LVQVTSDNIKLI+ENLKIAQ+RQKSY DKRRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWKGVLRFGRKDLSHVLQVQPIELKEDLSYREKAVQILNRKNQSTGFSSKLGG 237
            QVFLKLS W+GVLRF RK+                                   SSK GG
Sbjct: 1363 QVFLKLSSWRGVLRFERKE--------------------------------HRISSKPGG 1413

[Close]

BLAST of Pay0004627 vs. ExPASy TrEMBL
Match: A0A5A7VI06 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00360 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.8e-82
Identity = 184/363 (50.69%), Postives = 194/363 (53.44%), Query Frame = 0


Query: 1   MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
           MYRTLKKTYWWP                  VKPVRQRPGGLLNPLPVP+WKWEHITMDFL
Sbjct: 91  MYRTLKKTYWWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMDFL 150

Query: 61  FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRI-------------- 120
           FGLPRTSRG+DGIWVIVDR TKTA+FIPIKATSTLDQL KLYVDRI              
Sbjct: 151 FGLPRTSRGFDGIWVIVDRLTKTAQFIPIKATSTLDQLVKLYVDRIVSQHGVLMSIVSDR 210

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 211 DPRFTSKFWPSVQKAMGTKLKFSTAFHPLTDGQSERTIQTLEDMLRACVLQFKGNWDTHL 270

Query: 181 ---------------------ALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRE 204
                                ALYGRPCRTPVCW EVGE+ LVGP+LVQVTSDNIKLI+E
Sbjct: 271 SLMEFAYNNNYQSSIDMTLFEALYGRPCRTPVCWNEVGERKLVGPELVQVTSDNIKLIKE 330

[Close]

BLAST of Pay0004627 vs. NCBI nr
Match: XP_008459128.1 (PREDICTED: uncharacterized protein LOC103498328 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 7.7e-105
Identity = 200/253 (79.05%), Postives = 212/253 (83.79%), Query Frame = 0


Query: 1   MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
           MYRTLKKTYWWP                  VKPVRQR GGLLNPLP+P+WKWEHIT+DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRIALYGRPCRTPVCWI 120
           FGLP TSRGYDGIWVIVDR TK ARFIPIKATSTLDQLAKLYVDRI       +  VCW 
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRIT-----TQDSVCWN 120

Query: 121 EVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRRDLEFQIGEQVFLKLSPW 180
           EVGE+ LVGP+L+QVT DNIKLIRENLKIAQ+RQKSYADKRRRDLEFQIGEQVFLKLSPW
Sbjct: 121 EVGERKLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQVFLKLSPW 180

Query: 181 KGVLRFGRKDLSHVLQVQPIELKEDLSYREKAVQILNRKNQSTGFSSKLGGFLVFSDPLS 236
           +GVLRFGRKD SHVLQVQP ELKEDLSYRE+AVQIL+RK QSTGFSSK GGFLVFS+ LS
Sbjct: 181 RGVLRFGRKDPSHVLQVQPFELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSEALS 240

[Close]

BLAST of Pay0004627 vs. NCBI nr
Match: KAA0066793.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK27940.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 350.5 bits (898), Expect = 1.2e-92
Identity = 200/345 (57.97%), Postives = 200/345 (57.97%), Query Frame = 0


Query: 1   MYRTLKKTYWWPVKPVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVD 60
           MYRTLKKTYWW   PVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVD
Sbjct: 55  MYRTLKKTYWW---PVRQRPGGLLNPLPVPDWKWEHITMDFLFGLPRTSRGYDGIWVIVD 114

Query: 61  RPTKTARFIPIKATSTLDQLAKLYVDRI-------------------------------- 120
           RPTKTARFIPIKATSTLDQLAKLYVDRI                                
Sbjct: 115 RPTKTARFIPIKATSTLDQLAKLYVDRIVSQHGVPVSIVSDRDLRFTSKFWPCVQKTMGT 174

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 175 KLKFSTAFHPQTDGQSERTIQTLEDMLRACVLQFKGSWDTHLSLMEFAYNNSYQSSISMA 234

Query: 181 ---ALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRR 204
              ALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRR
Sbjct: 235 PFEALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRR 294

[Close]

BLAST of Pay0004627 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 317.0 bits (811), Expect = 1.4e-82
Identity = 170/263 (64.64%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 1    MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
            MYRTLKKTYWWP                  VKP+RQRPGGLLN LPVP+WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DR TKTARFIPIKA STLDQLAKLYVDRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRRDLEFQIGE 180
              RTPVCW EVGE+ LV P+LVQVTSDNIKLI+ENLKIAQ+RQKSY DKRRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWKGVLRFGRKDLSHVLQVQPIELKEDLSYREKAVQILNRKNQSTGFSSKLGG 237
            QVFLKLS W+GVLRF RK+                                   SSK GG
Sbjct: 1363 QVFLKLSSWRGVLRFERKE--------------------------------HRISSKPGG 1413

[Close]

BLAST of Pay0004627 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 317.0 bits (811), Expect = 1.4e-82
Identity = 170/263 (64.64%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 1    MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
            MYRTLKKTYWWP                  VKP+RQRPGGLLN LPVP+WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DR TKTARFIPIKA STLDQLAKLYVDRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRENLKIAQNRQKSYADKRRRDLEFQIGE 180
              RTPVCW EVGE+ LV P+LVQVTSDNIKLI+ENLKIAQ+RQKSY DKRRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWKGVLRFGRKDLSHVLQVQPIELKEDLSYREKAVQILNRKNQSTGFSSKLGG 237
            QVFLKLS W+GVLRF RK+                                   SSK GG
Sbjct: 1363 QVFLKLSSWRGVLRFERKE--------------------------------HRISSKPGG 1413

[Close]

BLAST of Pay0004627 vs. NCBI nr
Match: KAA0067723.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 184/363 (50.69%), Postives = 194/363 (53.44%), Query Frame = 0


Query: 1   MYRTLKKTYWWP------------------VKPVRQRPGGLLNPLPVPDWKWEHITMDFL 60
           MYRTLKKTYWWP                  VKPVRQRPGGLLNPLPVP+WKWEHITMDFL
Sbjct: 91  MYRTLKKTYWWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMDFL 150

Query: 61  FGLPRTSRGYDGIWVIVDRPTKTARFIPIKATSTLDQLAKLYVDRI-------------- 120
           FGLPRTSRG+DGIWVIVDR TKTA+FIPIKATSTLDQL KLYVDRI              
Sbjct: 151 FGLPRTSRGFDGIWVIVDRLTKTAQFIPIKATSTLDQLVKLYVDRIVSQHGVLMSIVSDR 210

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 211 DPRFTSKFWPSVQKAMGTKLKFSTAFHPLTDGQSERTIQTLEDMLRACVLQFKGNWDTHL 270

Query: 181 ---------------------ALYGRPCRTPVCWIEVGEQNLVGPKLVQVTSDNIKLIRE 204
                                ALYGRPCRTPVCW EVGE+ LVGP+LVQVTSDNIKLI+E
Sbjct: 271 SLMEFAYNNNYQSSIDMTLFEALYGRPCRTPVCWNEVGERKLVGPELVQVTSDNIKLIKE 330

The following BLAST results are available for this feature:

BLAST of Pay0004627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.2e-09	37.80	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.2e-09	37.80	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.2e-09	37.80	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.2e-09	37.80	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.2e-09	37.80	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0004627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAP1	3.7e-105	79.05	uncharacterized protein LOC103498328 OS=Cucumis melo OX=3656 GN=LOC103498328 PE=...	[more]
A0A5D3DXH2	5.6e-93	57.97	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7TKT0	6.8e-83	64.64	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3D150	6.8e-83	64.64	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7VI06	5.8e-82	50.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35...	[more]

BLAST of Pay0004627 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459128.1	7.7e-105	79.05	PREDICTED: uncharacterized protein LOC103498328 [Cucumis melo]	[more]
KAA0066793.1	1.2e-92	57.97	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK27940.1 D...	[more]
KAA0042035.1	1.4e-82	64.64	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK17971.1	1.4e-82	64.64	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0067723.1	1.2e-81	50.69	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Pay0004627 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 24..123 e-value: 6.7E-8 score: 34.0
None	No IPR available	PANTHER	PTHR46148:SF11	CCHC-TYPE INTEGRASE	coord: 89..170
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 89..170
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 25..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004627.1	Pay0004627.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity