Pay0004535 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004535
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	At4g19430
Location	chr07: 9174436 .. 9175271 (+)
RNA-Seq Expression	Pay0004535
Synteny	Pay0004535

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAGAAGGAAAAATAAAATTCTTCCTCAAAGCCTTCTCTTCCCATCATCCATTAATGTCTCTTTCCACCCAACTTCTAGGGCTTGGAAGGCTTGAGAAGAAGGGAAGAAAGAGGATCAAAAGAGAGAGTTCAAAGAGAGAAAGAAATGGCTATTATTCATACAAGGAAGTGAGTGACAATGCAGAGCATGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAAGAAGGGTCAATTTGGGACTACAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGTCATATACTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTATGAAGATGAGAGGATGTTTCAATCTATTGATCCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTATGGCTAACTGTATGTAAAATGATATAAAGGCTTGAATGAGTGATTTAACTACTAGTAAGTGTGTTTGTAGTTGTACCAACTTATTTCTGTGTCTAGGCTTAGAAGAATATTTGGAGTCCATTTTGGAACTTTTCTGAAAACAAAAGGAAGAGCCTTTTTCCTTTTGTTTTCAAAATTGTCTGTAAGAAAGTATGCTTTGGTGGCTAGTAATAAGTTGTAAAAATATTAATATGTACTAGAAATTTTTGTTTATAAGCTTGTAATTTTGGATGTCTAGAAGAGATAACAACCATAGAAGAATATATATTTAGGGGCATTTGAATTGACGTTCTATAAGGGTATTTGAGGCACCGACTATACTAAGTGATAAATCCCCAATTAGCTATCGTCAATACAATTTCAAGACCTCATTCGCTAC

mRNA sequence

AAAGAAGAAGGAAAAATAAAATTCTTCCTCAAAGCCTTCTCTTCCCATCATCCATTAATGTCTCTTTCCACCCAACTTCTAGGGCTTGGAAGGCTTGAGAAGAAGGGAAGAAAGAGGATCAAAAGAGAGAGTTCAAAGAGAGAAAGAAATGGCTATTATTCATACAAGGAAGTGAGTGACAATGCAGAGCATGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAAGAAGGGTCAATTTGGGACTACAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGTCATATACTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTATGAAGATGAGAGGATGTTTCAATCTATTGATCCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTATGGCTAACTGTATGTAAAATGATATAAAGGCTTGAATGAGTGATTTAACTACTAGTAAGTGTGTTTGTAGTTGTACCAACTTATTTCTGTGTCTAGGCTTAGAAGAATATTTGGAGTCCATTTTGGAACTTTTCTGAAAACAAAAGGAAGAGCCTTTTTCCTTTTGTTTTCAAAATTGTCTGTAAGAAAGTATGCTTTGGTGGCTAGTAATAAGTTGTAAAAATATTAATATGTACTAGAAATTTTTGTTTATAAGCTTGTAATTTTGGATGTCTAGAAGAGATAACAACCATAGAAGAATATATATTTAGGGGCATTTGAATTGACGTTCTATAAGGGTATTTGAGGCACCGACTATACTAAGTGATAAATCCCCAATTAGCTATCGTCAATACAATTTCAAGACCTCATTCGCTAC

Coding sequence (CDS)

ATGTCTCTTTCCACCCAACTTCTAGGGCTTGGAAGGCTTGAGAAGAAGGGAAGAAAGAGGATCAAAAGAGAGAGTTCAAAGAGAGAAAGAAATGGCTATTATTCATACAAGGAAGTGAGTGACAATGCAGAGCATGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAAGAAGGGTCAATTTGGGACTACAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGTCATATACTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTATGAAGATGAGAGGATGTTTCAATCTATTGATCCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTATGGCTAACTGTATGTAA

Protein sequence

MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYTTMANCM

Homology

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BLAST of Pay0004535 vs. ExPASy TrEMBL
Match: A0A5D3BSQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00900 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.9e-63
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKG-RRRRRRKKG 60
           MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKG RRRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120
           QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120

Query: 121 TMANCM 126
           TMANC+
Sbjct: 121 TMANCL 126

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BLAST of Pay0004535 vs. ExPASy TrEMBL
Match: A0A5A7UDK1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001040 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKG-RRRRRRKKG 60
           MSLSTQLLGLGRLEKKGRK+IKRESSKRERNGYYSYKEVSDNAEHGDSKG RRRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120
           QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120

Query: 121 TMANCM 126
           TMANC+
Sbjct: 121 TMANCL 126

[Close]

BLAST of Pay0004535 vs. ExPASy TrEMBL
Match: A0A0A0L609 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.1e-55
Identity = 114/130 (87.69%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRR-RRKKG 60
           MS+STQLL LGRLEKKG+KRIKRES KRE NGYYSYK+VSDN EHG+SKGRRRR RRKKG
Sbjct: 1   MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60

Query: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120
           QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERM +    SIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120

Query: 121 LPYTTMANCM 126
           LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130

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BLAST of Pay0004535 vs. ExPASy TrEMBL
Match: A0A6J1FKP2 (uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC111446301 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33
Identity = 83/136 (61.03%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVS--DNAEHGDSKGRRR----- 60
           MS+S Q+LGL  L+KK +K  +RE  +RER G++S  +    ++ + GD KGRRR     
Sbjct: 1   MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60

Query: 61  RRRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERM----FQSIDP 120
           RRRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNECCCDAYEDERM       +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSMPVLPYTTMANCM 126
           YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of Pay0004535 vs. ExPASy TrEMBL
Match: A0A1Q3D8H6 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32173 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.0e-10
Identity = 39/86 (45.35%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 44  EHGDSKGRRRRRRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDE-- 103
           EH ++ G +   RKK           +  WY TS+IS+ILRKAKAFYNECCCDA+ED   
Sbjct: 32  EHEENMGEKYMPRKKKPGHWALQFPRLGIWYMTSSISYILRKAKAFYNECCCDAFEDPVL 91

Query: 104 --RMFQSIDPYFSMPVLPYTTMANCM 126
             +    +D YFS PV+P  T++  M
Sbjct: 92  MGKQVTLVDSYFSTPVVPPPTISPYM 117

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BLAST of Pay0004535 vs. NCBI nr
Match: TYK01842.1 (hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKG-RRRRRRKKG 60
           MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKG RRRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120
           QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120

Query: 121 TMANCM 126
           TMANC+
Sbjct: 121 TMANCL 126

[Close]

BLAST of Pay0004535 vs. NCBI nr
Match: KAA0052276.1 (hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62
Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKG-RRRRRRKKG 60
           MSLSTQLLGLGRLEKKGRK+IKRESSKRERNGYYSYKEVSDNAEHGDSKG RRRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120
           QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQSIDPYFSMPVLPYT 120

Query: 121 TMANCM 126
           TMANC+
Sbjct: 121 TMANCL 126

[Close]

BLAST of Pay0004535 vs. NCBI nr
Match: KGN55571.1 (hypothetical protein Csa_012627 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 6.4e-55
Identity = 114/130 (87.69%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRR-RRKKG 60
           MS+STQLL LGRLEKKG+KRIKRES KRE NGYYSYK+VSDN EHG+SKGRRRR RRKKG
Sbjct: 1   MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60

Query: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120
           QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERM +    SIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120

Query: 121 LPYTTMANCM 126
           LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130

[Close]

BLAST of Pay0004535 vs. NCBI nr
Match: KAG6608012.1 (hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 6.9e-33
Identity = 83/136 (61.03%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVS--DNAEHGDSKGRRR----- 60
           MS+S Q+LGL  L+KK +K  +RE  +RER G++S  +    ++ + GD KGRRR     
Sbjct: 1   MSVSIQVLGLTSLQKKEKKCHRREILERERTGHFSTSQHGHHESEQPGDGKGRRREKKQG 60

Query: 61  RRRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERM----FQSIDP 120
           RRRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNECCCDAYEDERM       +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSMPVLPYTTMANCM 126
           YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of Pay0004535 vs. NCBI nr
Match: XP_022940822.1 (uncharacterized protein LOC111446301 [Cucurbita moschata])

HSP 1 Score: 151.0 bits (380), Expect = 6.9e-33
Identity = 83/136 (61.03%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVS--DNAEHGDSKGRRR----- 60
           MS+S Q+LGL  L+KK +K  +RE  +RER G++S  +    ++ + GD KGRRR     
Sbjct: 1   MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60

Query: 61  RRRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERM----FQSIDP 120
           RRRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNECCCDAYEDERM       +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSMPVLPYTTMANCM 126
           YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of Pay0004535 vs. TAIR 10
Match: AT4G19430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-11
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 37  KEVSDNAEHGDSKGRRRRRRKKGQFG-TTRDVLHMN-FWYFTSTISHILRKAKAFYNECC 96
           +E ++  EHG    +  +     ++G   RDV  ++  WY   +ISHILRKA+AFYNE C
Sbjct: 78  EEETNQQEHGKVSNKDGKSITATKYGDLRRDVARLSLLWYMKCSISHILRKARAFYNEFC 137

Query: 97  CDAYEDERMFQSIDPYFSMPVL 117
           CD Y +      ++PYFS+PV+
Sbjct: 138 CDTYAESNTMAVVEPYFSIPVI 159

The following BLAST results are available for this feature:

BLAST of Pay0004535 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004535 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSQ8	6.9e-63	98.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UDK1	1.5e-62	97.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0L609	3.1e-55	87.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1	[more]
A0A6J1FKP2	3.3e-33	61.03	uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC1114463...	[more]
A0A1Q3D8H6	3.0e-10	45.35	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]

BLAST of Pay0004535 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01842.1	1.4e-62	98.41	hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]	[more]
KAA0052276.1	3.2e-62	97.62	hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]	[more]
KGN55571.1	6.4e-55	87.69	hypothetical protein Csa_012627 [Cucumis sativus]	[more]
KAG6608012.1	6.9e-33	61.03	hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022940822.1	6.9e-33	61.03	uncharacterized protein LOC111446301 [Cucurbita moschata]	[more]

BLAST of Pay0004535 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19430.1	3.5e-11	40.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004535.1	Pay0004535.1	mRNA