Pay0004440 (gene) Melon (Payzawat) v1

Overview
NamePay0004440
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr06: 11591969 .. 11593494 (-)
RNA-Seq ExpressionPay0004440
SyntenyPay0004440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCAGATGATTTGGATAATGTCCCTTTAGCTCATTTGTTGAAGAAGACCAATGTCCCAGAGGTTATTGATGAAATACCAGTGGCTCCTTCCGTGTCTGCTCATTCTCAAGAGAGCTCGTCAACTGAGGGAGTATTTTTTCCTACTCTTAGTATTGCTCCGGCTTCTAATGTTCAACCTGGATCGTCAGTGTGTTCCCCTCCTTCTGTGTCACTTCCCTTTGCACCAGATGATGCCCATGTATATGTTCTTGATAATGTTCCTAGTGATGTTTCTACTACATCTGAAGGGCAAACTGACGTTCAAAGTAATGAGAATGAGGTGGACCCTTCAAACACTGCTGTGTGCACTGACGAAGTTCCCACAAATGCTGATGATAGTCTTGTTGTTCCACCAAGTTCTTCTGAAGTCCCGGTTGCATTAAAGCCAGTGAAGAGGAAATCACAACAAAATCGATGCAATAAAACCACCAAAATAGGTAGAAAGAAGATTCCTCCTAATATTCCATCTGTTCCCATTGATGGAATCTTGTTTCATCACGAGGAGAATGTTCAGTGTTGGAAGTTTGTGGTTCAACGGTGGTTAGCTGATGAGGTAAATGTTTTTGACAAACATCAATTGTGCATGAGTATCATGGACCTCATTGAAAGGGCAGGTTTAGCAAAAACTATTTTGAATGTTGGTCCGTTTTATCCTCAGCTTATTAGGGAGTTTATAATCAATTTGCCTAATGAATTTAGTGATCCAAGTACCCCGTTTATCAGACTGTTCATGTTAGAGGTTTCAAATTTGTAATTTTTCCTACTGTGATTAACGAGTTTTTAGGTAATGTTGTTGATATTGACTGTTCTCCATCGTCTCCCTCCACTGATGTTCTGGCTTCTGTATTATCTGGTGGAACTTTATCTACGTGGCCTGTAAATGGAATCTTTGCAGTTGCTCTTAGCATTAAATATGCCATTATGCATAAGATTGGTATTGCTAATTGGTTCCCCTCCTCTCATGCCTCCAGTGTATCTACAGCCTTAGGAACTTTTTTGTATCAAATTTGTAATGACAATAAGGTGGATACATGTGCTTTTATATATAATCAGCAGTTAAGGCATGTTGGTTTGTTTAGGGTAAAGGTTTCTATTGCTCTCCCGCGATTTTTCTCTAGTCTACTACTTCACTTAAATGGTGCCGTGTTAACTGCATCAGATGCTCCTCGACCTGATCCTAAAACATTATCACTCAATTACAGACTTTTTCAGGGTAGTCATGTGCCTGATATTGATCATGATGTGCATCCGTCTTGCGGCTCATGCATTTTCGATAGAAGTGACTGGGATAAGTCTGATGAGGGCTTCTTTGTTGATAGGAAGTTGGCTTCTTGTATTGTTAATTCACTTACTGCTGAATCTCGTGCTTTGTCTATTTCTATCAATCTGTTGTCTGAACGGTGCTTAGAGGTGGATAGCTCTCATTCGTCATTTAAAGATTTTGCCCCATTTACCAGTCGAAGGGAAAATGGGTTCGAATAG

mRNA sequence

ATGGACTCAGATGATTTGGATAATGTCCCTTTAGCTCATTTGTTGAAGAAGACCAATGTCCCAGAGGTTATTGATGAAATACCAGTGGCTCCTTCCGTGTCTGCTCATTCTCAAGAGAGCTCGTCAACTGAGGGAGTATTTTTTCCTACTCTTAGTATTGCTCCGGCTTCTAATGTTCAACCTGGATCGTCAGTGTGTTCCCCTCCTTCTGTGTCACTTCCCTTTGCACCAGATGATGCCCATGTATATGTTCTTGATAATGTTCCTAGTGATGTTTCTACTACATCTGAAGGGCAAACTGACGTTCAAAGTAATGAGAATGAGGTGGACCCTTCAAACACTGCTGTGTGCACTGACGAAGTTCCCACAAATGCTGATGATAGTCTTGTTGTTCCACCAAGTTCTTCTGAAGTCCCGGTTGCATTAAAGCCAGTGAAGAGGAAATCACAACAAAATCGATGCAATAAAACCACCAAAATAGGTAGAAAGAAGATTCCTCCTAATATTCCATCTGTTCCCATTGATGGAATCTTGTTTCATCACGAGGAGAATGTTCAGTGTTGGAAGTTTGTGGTTCAACGGTGGTTAGCTGATGAGGTAAATGTTTTTGACAAACATCAATTGTGCATGAGTATCATGGACCTCATTGAAAGGGCAGGTTTAGCAAAAACTATTTTGAATGTTGGTCCGTTTTATCCTCAGCTTATTAGGGAGTTTATAATCAATTTGCCTAATGAATTTAGTGATCCAAGTAATGTTGTTGATATTGACTGTTCTCCATCGTCTCCCTCCACTGATGTTCTGGCTTCTGTATTATCTGGTGGAACTTTATCTACGTGGCCTGTAAATGGAATCTTTGCAGTTGCTCTTAGCATTAAATATGCCATTATGCATAAGATTGGTATTGCTAATTGGTTCCCCTCCTCTCATGCCTCCAGTGTATCTACAGCCTTAGGAACTTTTTTGTATCAAATTTGTAATGACAATAAGGTGGATACATGTGCTTTTATATATAATCAGCAGTTAAGGCATGTTGGTTTGTTTAGGGTAAAGGTTTCTATTGCTCTCCCGCGATTTTTCTCTAGTCTACTACTTCACTTAAATGGTGCCGTGTTAACTGCATCAGATGCTCCTCGACCTGATCCTAAAACATTATCACTCAATTACAGACTTTTTCAGGGTAGTCATGTGCCTGATATTGATCATGATGTGCATCCGTCTTGCGGCTCATGCATTTTCGATAGAAGTGACTGGGATAAGTCTGATGAGGGCTTCTTTGTTGATAGGAAGTTGGCTTCTTGTATTGTTAATTCACTTACTGCTGAATCTCGTGCTTTGTCTATTTCTATCAATCTGTTGTCTGAACGGTGCTTAGAGGTGGATAGCTCTCATTCGTCATTTAAAGATTTTGCCCCATTTACCAGTCGAAGGGAAAATGGGTTCGAATAG

Coding sequence (CDS)

ATGGACTCAGATGATTTGGATAATGTCCCTTTAGCTCATTTGTTGAAGAAGACCAATGTCCCAGAGGTTATTGATGAAATACCAGTGGCTCCTTCCGTGTCTGCTCATTCTCAAGAGAGCTCGTCAACTGAGGGAGTATTTTTTCCTACTCTTAGTATTGCTCCGGCTTCTAATGTTCAACCTGGATCGTCAGTGTGTTCCCCTCCTTCTGTGTCACTTCCCTTTGCACCAGATGATGCCCATGTATATGTTCTTGATAATGTTCCTAGTGATGTTTCTACTACATCTGAAGGGCAAACTGACGTTCAAAGTAATGAGAATGAGGTGGACCCTTCAAACACTGCTGTGTGCACTGACGAAGTTCCCACAAATGCTGATGATAGTCTTGTTGTTCCACCAAGTTCTTCTGAAGTCCCGGTTGCATTAAAGCCAGTGAAGAGGAAATCACAACAAAATCGATGCAATAAAACCACCAAAATAGGTAGAAAGAAGATTCCTCCTAATATTCCATCTGTTCCCATTGATGGAATCTTGTTTCATCACGAGGAGAATGTTCAGTGTTGGAAGTTTGTGGTTCAACGGTGGTTAGCTGATGAGGTAAATGTTTTTGACAAACATCAATTGTGCATGAGTATCATGGACCTCATTGAAAGGGCAGGTTTAGCAAAAACTATTTTGAATGTTGGTCCGTTTTATCCTCAGCTTATTAGGGAGTTTATAATCAATTTGCCTAATGAATTTAGTGATCCAAGTAATGTTGTTGATATTGACTGTTCTCCATCGTCTCCCTCCACTGATGTTCTGGCTTCTGTATTATCTGGTGGAACTTTATCTACGTGGCCTGTAAATGGAATCTTTGCAGTTGCTCTTAGCATTAAATATGCCATTATGCATAAGATTGGTATTGCTAATTGGTTCCCCTCCTCTCATGCCTCCAGTGTATCTACAGCCTTAGGAACTTTTTTGTATCAAATTTGTAATGACAATAAGGTGGATACATGTGCTTTTATATATAATCAGCAGTTAAGGCATGTTGGTTTGTTTAGGGTAAAGGTTTCTATTGCTCTCCCGCGATTTTTCTCTAGTCTACTACTTCACTTAAATGGTGCCGTGTTAACTGCATCAGATGCTCCTCGACCTGATCCTAAAACATTATCACTCAATTACAGACTTTTTCAGGGTAGTCATGTGCCTGATATTGATCATGATGTGCATCCGTCTTGCGGCTCATGCATTTTCGATAGAAGTGACTGGGATAAGTCTGATGAGGGCTTCTTTGTTGATAGGAAGTTGGCTTCTTGTATTGTTAATTCACTTACTGCTGAATCTCGTGCTTTGTCTATTTCTATCAATCTGTTGTCTGAACGGTGCTTAGAGGTGGATAGCTCTCATTCGTCATTTAAAGATTTTGCCCCATTTACCAGTCGAAGGGAAAATGGGTTCGAATAG

Protein sequence

MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQPGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDEVPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFHHEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFIINLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKIGIANWFPSSHASSVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGLFRVKVSIALPRFFSSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQGSHVPDIDHDVHPSCGSCIFDRSDWDKSDEGFFVDRKLASCIVNSLTAESRALSISINLLSERCLEVDSSHSSFKDFAPFTSRRENGFE
Homology
BLAST of Pay0004440 vs. ExPASy TrEMBL
Match: A0A1S3C405 (uncharacterized protein LOC103496232 OS=Cucumis melo OX=3656 GN=LOC103496232 PE=4 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 8.6e-263
Identity = 462/482 (95.85%), Postives = 468/482 (97.10%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           MDSDDLDNVPLAHLLKKTNVPEV DEI VAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ
Sbjct: 1   MDSDDLDNVPLAHLLKKTNVPEVTDEILVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PGSSVCSPPSVSL FAPDD H YVLDNVPSDVSTTSEGQTDVQSNENEVDPSN AVC DE
Sbjct: 61  PGSSVCSPPSVSLAFAPDDVHAYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNPAVCADE 120

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VPTNADDSL VPPSSSEVPVALKPVKRKSQQNR NKTTKIGRKK+PPNIPSVPIDGILFH
Sbjct: 121 VPTNADDSLAVPPSSSEVPVALKPVKRKSQQNRRNKTTKIGRKKVPPNIPSVPIDGILFH 180

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
           HEENVQCWKFVVQRWLADEVNV DKHQ CMSIMDLIERAGLAKTILNVGPFYPQLIREFI
Sbjct: 181 HEENVQCWKFVVQRWLADEVNVSDKHQSCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240

Query: 241 INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 300
           INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI
Sbjct: 241 INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 300

Query: 301 GIANWFPSSHASSVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGLFRVKVSIALPRFF 360
           GIANWFPSSHAS+VSTALGTFLYQICNDNKVDTCAFIYNQQLRHVG FRVKVSIALPRFF
Sbjct: 301 GIANWFPSSHASNVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGSFRVKVSIALPRFF 360

Query: 361 SSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQGSHVPDIDHDVHPSCGSCIFDRSDWDK 420
           SSLLLHLNGAVLTASDAPRP+PKTLSL+YRLFQGSHVPDIDHDVH SCGSCIFDRSDWD+
Sbjct: 361 SSLLLHLNGAVLTASDAPRPNPKTLSLSYRLFQGSHVPDIDHDVHLSCGSCIFDRSDWDE 420

Query: 421 SDEGFFVDRKLASCIVNSLTAESRALSISINLLSERCLEVDSSHSSFKDFAPFTSRRENG 480
           SDEGFFVDRKLASCIVNSLTAESRALS SINLLSERCLEVDSSHSSFKDFAPFT+RRENG
Sbjct: 421 SDEGFFVDRKLASCIVNSLTAESRALSTSINLLSERCLEVDSSHSSFKDFAPFTNRRENG 480

Query: 481 FE 483
           FE
Sbjct: 481 FE 482

BLAST of Pay0004440 vs. ExPASy TrEMBL
Match: A0A5D3CUK9 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001050 PE=4 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 5.8e-227
Identity = 410/459 (89.32%), Postives = 415/459 (90.41%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           MDSDDLDNVPLAHLLKKTNVPEV DEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ
Sbjct: 7   MDSDDLDNVPLAHLLKKTNVPEVTDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 66

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PGSSVCSPPSVSL FAPDD H YVLDNVPSDVSTTSEGQTDVQSNENEVDPSN AVC DE
Sbjct: 67  PGSSVCSPPSVSLAFAPDDVHAYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNPAVCADE 126

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VPTNADDSL VPPSSSEVPVALKPVKRKSQQNR NKTTKIGRKK+PPNIPSVPIDGILFH
Sbjct: 127 VPTNADDSLAVPPSSSEVPVALKPVKRKSQQNRRNKTTKIGRKKVPPNIPSVPIDGILFH 186

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
           HEENVQCWKFVVQRWLADEVNV DKHQ CMSIMDLIERAG                    
Sbjct: 187 HEENVQCWKFVVQRWLADEVNVSDKHQSCMSIMDLIERAG-------------------- 246

Query: 241 INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 300
                      NVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI
Sbjct: 247 -----------NVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 306

Query: 301 GIANWFPSSHASSVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGLFRVKVSIALPRFF 360
           GIANWFPSSHAS+VSTALGTFLYQICNDNKVDTCAFIYNQQLRHVG FRVKVSIALPRFF
Sbjct: 307 GIANWFPSSHASNVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGSFRVKVSIALPRFF 366

Query: 361 SSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQGSHVPDIDHDVHPSCGSCIFDRSDWDK 420
           SSLLLHLNGAVLTASDAPRP+PKTLSL+YRLFQGSHVPDIDHDVH SCGSCIFDRSDWD+
Sbjct: 367 SSLLLHLNGAVLTASDAPRPNPKTLSLSYRLFQGSHVPDIDHDVHLSCGSCIFDRSDWDE 426

Query: 421 SDEGFFVDRKLASCIVNSLTAESRALSISINLLSERCLE 460
           SDEGFFVDRKLASCIVNSLTAESRALS SINLLSERCLE
Sbjct: 427 SDEGFFVDRKLASCIVNSLTAESRALSTSINLLSERCLE 434

BLAST of Pay0004440 vs. ExPASy TrEMBL
Match: A0A1S3CMN6 (uncharacterized protein LOC103502671 OS=Cucumis melo OX=3656 GN=LOC103502671 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 7.5e-150
Identity = 289/443 (65.24%), Postives = 325/443 (73.36%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           M+SDDLD+VPLA LLKK  V +V  E+P+ PSVS HSQ++SSTE VF PTL I   SN+Q
Sbjct: 40  MNSDDLDDVPLARLLKKATVSDVNIEMPMTPSVSVHSQKTSSTERVFVPTLGIHHTSNLQ 99

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PG S+  PPS SLPF PD AH     ++P D                  +P N  + + E
Sbjct: 100 PGPSIHCPPSASLPFEPDVAHA----SIPGD-----------------ANPLNPNIRSQE 159

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VP N DD+  VPPSS ++P+A K  K+KSQQNRCN T K GRKKIPPNIP V IDGI FH
Sbjct: 160 VPANTDDNPTVPPSSPKIPIAPKSAKQKSQQNRCNITIKTGRKKIPPNIPYVSIDGISFH 219

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
            +ENVQ WKF+V++ + DEVNV DKHQ CMSIMDLIERAGL+KTI NV PFYPQLIREFI
Sbjct: 220 KKENVQHWKFMVKQRITDEVNVSDKHQFCMSIMDLIERAGLSKTISNVSPFYPQLIREFI 279

Query: 241 INLPNEFSDPS--------------------------NVVDIDCSPSSPSTDVLASVLSG 300
            N  ++F+DPS                          NVVDIDCSPSSPSTDVLAS+LSG
Sbjct: 280 FNFLDKFNDPSRPDYETVYIRSFKFVISPAMINDFVENVVDIDCSPSSPSTDVLASILSG 339

Query: 301 GTLSTWPVNGIFAVALSIKYAIMHKIGIANWFPSSHASSVSTALGTFLYQICNDNKVDTC 360
           GTLS WPVNGI AVALS KYAI+HKI IANWF SSHASSV  ALGTFLYQICNDNKVDT 
Sbjct: 340 GTLSAWPVNGIPAVALSRKYAILHKISIANWFTSSHASSVFAALGTFLYQICNDNKVDTG 399

Query: 361 AFIYNQQLRHVGLFRVKVSIALPRFFSSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQG 418
           AFIYNQ LRHVG F VK+ IALPRFFSSLL HLN AV+TASDAPRPDPKTLSL+YRLF+G
Sbjct: 400 AFIYNQLLRHVGSFGVKIPIALPRFFSSLLHHLNDAVITASDAPRPDPKTLSLSYRLFRG 459

BLAST of Pay0004440 vs. ExPASy TrEMBL
Match: A0A5D3DCA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00320 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 3.5e-147
Identity = 285/443 (64.33%), Postives = 317/443 (71.56%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           M+SDDLD+VPLA LLKK  V +V  E+P+ PSVS HSQ++SSTE VF PTL I   SN+Q
Sbjct: 71  MNSDDLDDVPLARLLKKATVSDVNIEMPMTPSVSVHSQKTSSTERVFVPTLGIHHTSNLQ 130

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PG S+  PPS SLPF PD AH  +                                   E
Sbjct: 131 PGPSIHCPPSASLPFEPDVAHASI----------------------------------PE 190

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VP N DD+  VPPSS ++P+A K  K+KSQQNRCN T K GRKKIPPNIP V IDGI FH
Sbjct: 191 VPANTDDNPTVPPSSPKIPIAPKSAKQKSQQNRCNITIKTGRKKIPPNIPYVSIDGISFH 250

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
            +ENVQ WKF+V++ + DEVNV DKHQ CMSIMDLIERAGL+KTI NV PFYPQLIREFI
Sbjct: 251 KKENVQHWKFMVKQRITDEVNVSDKHQFCMSIMDLIERAGLSKTISNVSPFYPQLIREFI 310

Query: 241 INLPNEFSDPS--------------------------NVVDIDCSPSSPSTDVLASVLSG 300
            N  ++F+DPS                          NVVDIDCSPSSPSTDVLAS+LSG
Sbjct: 311 FNFLDKFNDPSRPDYETVYIRSFKFVISPAMINDFVENVVDIDCSPSSPSTDVLASILSG 370

Query: 301 GTLSTWPVNGIFAVALSIKYAIMHKIGIANWFPSSHASSVSTALGTFLYQICNDNKVDTC 360
           GTLS WPVNGI AVALS KYAI+HKI IANWF SSHASSV  ALGTFLYQICNDNKVDT 
Sbjct: 371 GTLSAWPVNGIPAVALSRKYAILHKISIANWFTSSHASSVFAALGTFLYQICNDNKVDTG 430

Query: 361 AFIYNQQLRHVGLFRVKVSIALPRFFSSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQG 418
           AFIYNQ LRHVG F VK+ IALPRFFSSLL HLN AV+TASDAPRPDPKTLSL+YRLF+G
Sbjct: 431 AFIYNQLLRHVGSFGVKIPIALPRFFSSLLHHLNDAVITASDAPRPDPKTLSLSYRLFRG 479

BLAST of Pay0004440 vs. ExPASy TrEMBL
Match: A0A5D3D4K0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00460 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 1.1e-145
Identity = 298/443 (67.27%), Postives = 308/443 (69.53%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           MDSDDLDNVPLAHLLKKTNVP+V DEIP  P VSAHSQESSSTEG               
Sbjct: 572 MDSDDLDNVPLAHLLKKTNVPKVTDEIPAVPFVSAHSQESSSTEGCI------------- 631

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
                  PP VSLPFAPDDAH  V  NVPS+VS   EGQTDVQSN+NEVDPSN  VC DE
Sbjct: 632 ------PPPFVSLPFAPDDAHASVPHNVPSNVSAAPEGQTDVQSNKNEVDPSNPGVCADE 691

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           V  NADDS VVPPSSSEV VA K VKRKSQQNRCNKTTK  RKKIPPNIPSV IDGI FH
Sbjct: 692 VSRNADDSPVVPPSSSEVSVAPKLVKRKSQQNRCNKTTKTRRKKIPPNIPSVSIDGISFH 751

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
            +ENVQCWKFVVQR LADEVNVFDKHQ CMSIMDLIERAGLAKTI NVGPFYPQLIREFI
Sbjct: 752 DKENVQCWKFVVQRRLADEVNVFDKHQSCMSIMDLIERAGLAKTIFNVGPFYPQLIREFI 811

Query: 241 INLPNEFSDPS--------------------------NVVDIDCSPSSPSTDVLASVLSG 300
           +N P+EF+DPS                          NVVDIDCS SSPS  +LASVLSG
Sbjct: 812 VNFPDEFNDPSSPDYQTAHVRGFKFEISPTVINRFLGNVVDIDCSSSSPSIGILASVLSG 871

Query: 301 GTLSTWPVNGIFAVALSIKYAIMHKIGIANWFPSSHASSVSTALGTFLYQICNDNKVDTC 360
            TLSTWPVNGI  VALSIKY I+HKIG    F                            
Sbjct: 872 ATLSTWPVNGIPVVALSIKYVILHKIGGYRCF---------------------------- 931

Query: 361 AFIYNQQLRHVGLFRVKVSIALPRFFSSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQG 418
              YNQ LRHVG F VKV IALPR FSSLLLHLNG VLTAS+AP  DPKTLSL YRLFQ 
Sbjct: 932 ---YNQLLRHVGSFGVKVPIALPRLFSSLLLHLNGVVLTASNAPGHDPKTLSLIYRLFQR 964

BLAST of Pay0004440 vs. NCBI nr
Match: XP_008456227.1 (PREDICTED: uncharacterized protein LOC103496232 [Cucumis melo])

HSP 1 Score: 915.6 bits (2365), Expect = 1.8e-262
Identity = 462/482 (95.85%), Postives = 468/482 (97.10%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           MDSDDLDNVPLAHLLKKTNVPEV DEI VAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ
Sbjct: 1   MDSDDLDNVPLAHLLKKTNVPEVTDEILVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PGSSVCSPPSVSL FAPDD H YVLDNVPSDVSTTSEGQTDVQSNENEVDPSN AVC DE
Sbjct: 61  PGSSVCSPPSVSLAFAPDDVHAYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNPAVCADE 120

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VPTNADDSL VPPSSSEVPVALKPVKRKSQQNR NKTTKIGRKK+PPNIPSVPIDGILFH
Sbjct: 121 VPTNADDSLAVPPSSSEVPVALKPVKRKSQQNRRNKTTKIGRKKVPPNIPSVPIDGILFH 180

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
           HEENVQCWKFVVQRWLADEVNV DKHQ CMSIMDLIERAGLAKTILNVGPFYPQLIREFI
Sbjct: 181 HEENVQCWKFVVQRWLADEVNVSDKHQSCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240

Query: 241 INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 300
           INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI
Sbjct: 241 INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 300

Query: 301 GIANWFPSSHASSVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGLFRVKVSIALPRFF 360
           GIANWFPSSHAS+VSTALGTFLYQICNDNKVDTCAFIYNQQLRHVG FRVKVSIALPRFF
Sbjct: 301 GIANWFPSSHASNVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGSFRVKVSIALPRFF 360

Query: 361 SSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQGSHVPDIDHDVHPSCGSCIFDRSDWDK 420
           SSLLLHLNGAVLTASDAPRP+PKTLSL+YRLFQGSHVPDIDHDVH SCGSCIFDRSDWD+
Sbjct: 361 SSLLLHLNGAVLTASDAPRPNPKTLSLSYRLFQGSHVPDIDHDVHLSCGSCIFDRSDWDE 420

Query: 421 SDEGFFVDRKLASCIVNSLTAESRALSISINLLSERCLEVDSSHSSFKDFAPFTSRRENG 480
           SDEGFFVDRKLASCIVNSLTAESRALS SINLLSERCLEVDSSHSSFKDFAPFT+RRENG
Sbjct: 421 SDEGFFVDRKLASCIVNSLTAESRALSTSINLLSERCLEVDSSHSSFKDFAPFTNRRENG 480

Query: 481 FE 483
           FE
Sbjct: 481 FE 482

BLAST of Pay0004440 vs. NCBI nr
Match: KAA0037163.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK13909.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 796.6 bits (2056), Expect = 1.2e-226
Identity = 410/459 (89.32%), Postives = 415/459 (90.41%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           MDSDDLDNVPLAHLLKKTNVPEV DEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ
Sbjct: 7   MDSDDLDNVPLAHLLKKTNVPEVTDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 66

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PGSSVCSPPSVSL FAPDD H YVLDNVPSDVSTTSEGQTDVQSNENEVDPSN AVC DE
Sbjct: 67  PGSSVCSPPSVSLAFAPDDVHAYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNPAVCADE 126

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VPTNADDSL VPPSSSEVPVALKPVKRKSQQNR NKTTKIGRKK+PPNIPSVPIDGILFH
Sbjct: 127 VPTNADDSLAVPPSSSEVPVALKPVKRKSQQNRRNKTTKIGRKKVPPNIPSVPIDGILFH 186

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
           HEENVQCWKFVVQRWLADEVNV DKHQ CMSIMDLIERAG                    
Sbjct: 187 HEENVQCWKFVVQRWLADEVNVSDKHQSCMSIMDLIERAG-------------------- 246

Query: 241 INLPNEFSDPSNVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 300
                      NVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI
Sbjct: 247 -----------NVVDIDCSPSSPSTDVLASVLSGGTLSTWPVNGIFAVALSIKYAIMHKI 306

Query: 301 GIANWFPSSHASSVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGLFRVKVSIALPRFF 360
           GIANWFPSSHAS+VSTALGTFLYQICNDNKVDTCAFIYNQQLRHVG FRVKVSIALPRFF
Sbjct: 307 GIANWFPSSHASNVSTALGTFLYQICNDNKVDTCAFIYNQQLRHVGSFRVKVSIALPRFF 366

Query: 361 SSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQGSHVPDIDHDVHPSCGSCIFDRSDWDK 420
           SSLLLHLNGAVLTASDAPRP+PKTLSL+YRLFQGSHVPDIDHDVH SCGSCIFDRSDWD+
Sbjct: 367 SSLLLHLNGAVLTASDAPRPNPKTLSLSYRLFQGSHVPDIDHDVHLSCGSCIFDRSDWDE 426

Query: 421 SDEGFFVDRKLASCIVNSLTAESRALSISINLLSERCLE 460
           SDEGFFVDRKLASCIVNSLTAESRALS SINLLSERCLE
Sbjct: 427 SDEGFFVDRKLASCIVNSLTAESRALSTSINLLSERCLE 434

BLAST of Pay0004440 vs. NCBI nr
Match: XP_008464913.1 (PREDICTED: uncharacterized protein LOC103502671 [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 1.6e-149
Identity = 289/443 (65.24%), Postives = 325/443 (73.36%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           M+SDDLD+VPLA LLKK  V +V  E+P+ PSVS HSQ++SSTE VF PTL I   SN+Q
Sbjct: 40  MNSDDLDDVPLARLLKKATVSDVNIEMPMTPSVSVHSQKTSSTERVFVPTLGIHHTSNLQ 99

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PG S+  PPS SLPF PD AH     ++P D                  +P N  + + E
Sbjct: 100 PGPSIHCPPSASLPFEPDVAHA----SIPGD-----------------ANPLNPNIRSQE 159

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VP N DD+  VPPSS ++P+A K  K+KSQQNRCN T K GRKKIPPNIP V IDGI FH
Sbjct: 160 VPANTDDNPTVPPSSPKIPIAPKSAKQKSQQNRCNITIKTGRKKIPPNIPYVSIDGISFH 219

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
            +ENVQ WKF+V++ + DEVNV DKHQ CMSIMDLIERAGL+KTI NV PFYPQLIREFI
Sbjct: 220 KKENVQHWKFMVKQRITDEVNVSDKHQFCMSIMDLIERAGLSKTISNVSPFYPQLIREFI 279

Query: 241 INLPNEFSDPS--------------------------NVVDIDCSPSSPSTDVLASVLSG 300
            N  ++F+DPS                          NVVDIDCSPSSPSTDVLAS+LSG
Sbjct: 280 FNFLDKFNDPSRPDYETVYIRSFKFVISPAMINDFVENVVDIDCSPSSPSTDVLASILSG 339

Query: 301 GTLSTWPVNGIFAVALSIKYAIMHKIGIANWFPSSHASSVSTALGTFLYQICNDNKVDTC 360
           GTLS WPVNGI AVALS KYAI+HKI IANWF SSHASSV  ALGTFLYQICNDNKVDT 
Sbjct: 340 GTLSAWPVNGIPAVALSRKYAILHKISIANWFTSSHASSVFAALGTFLYQICNDNKVDTG 399

Query: 361 AFIYNQQLRHVGLFRVKVSIALPRFFSSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQG 418
           AFIYNQ LRHVG F VK+ IALPRFFSSLL HLN AV+TASDAPRPDPKTLSL+YRLF+G
Sbjct: 400 AFIYNQLLRHVGSFGVKIPIALPRFFSSLLHHLNDAVITASDAPRPDPKTLSLSYRLFRG 459

BLAST of Pay0004440 vs. NCBI nr
Match: KAA0051546.1 (uncharacterized protein E6C27_scaffold174G00770 [Cucumis melo var. makuwa] >TYK21277.1 uncharacterized protein E5676_scaffold101G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 531.6 bits (1368), Expect = 7.2e-147
Identity = 285/443 (64.33%), Postives = 317/443 (71.56%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           M+SDDLD+VPLA LLKK  V +V  E+P+ PSVS HSQ++SSTE VF PTL I   SN+Q
Sbjct: 71  MNSDDLDDVPLARLLKKATVSDVNIEMPMTPSVSVHSQKTSSTERVFVPTLGIHHTSNLQ 130

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
           PG S+  PPS SLPF PD AH  +                                   E
Sbjct: 131 PGPSIHCPPSASLPFEPDVAHASI----------------------------------PE 190

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           VP N DD+  VPPSS ++P+A K  K+KSQQNRCN T K GRKKIPPNIP V IDGI FH
Sbjct: 191 VPANTDDNPTVPPSSPKIPIAPKSAKQKSQQNRCNITIKTGRKKIPPNIPYVSIDGISFH 250

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
            +ENVQ WKF+V++ + DEVNV DKHQ CMSIMDLIERAGL+KTI NV PFYPQLIREFI
Sbjct: 251 KKENVQHWKFMVKQRITDEVNVSDKHQFCMSIMDLIERAGLSKTISNVSPFYPQLIREFI 310

Query: 241 INLPNEFSDPS--------------------------NVVDIDCSPSSPSTDVLASVLSG 300
            N  ++F+DPS                          NVVDIDCSPSSPSTDVLAS+LSG
Sbjct: 311 FNFLDKFNDPSRPDYETVYIRSFKFVISPAMINDFVENVVDIDCSPSSPSTDVLASILSG 370

Query: 301 GTLSTWPVNGIFAVALSIKYAIMHKIGIANWFPSSHASSVSTALGTFLYQICNDNKVDTC 360
           GTLS WPVNGI AVALS KYAI+HKI IANWF SSHASSV  ALGTFLYQICNDNKVDT 
Sbjct: 371 GTLSAWPVNGIPAVALSRKYAILHKISIANWFTSSHASSVFAALGTFLYQICNDNKVDTG 430

Query: 361 AFIYNQQLRHVGLFRVKVSIALPRFFSSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQG 418
           AFIYNQ LRHVG F VK+ IALPRFFSSLL HLN AV+TASDAPRPDPKTLSL+YRLF+G
Sbjct: 431 AFIYNQLLRHVGSFGVKIPIALPRFFSSLLHHLNDAVITASDAPRPDPKTLSLSYRLFRG 479

BLAST of Pay0004440 vs. NCBI nr
Match: KAA0039208.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK18475.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 526.6 bits (1355), Expect = 2.3e-145
Identity = 298/443 (67.27%), Postives = 308/443 (69.53%), Query Frame = 0

Query: 1   MDSDDLDNVPLAHLLKKTNVPEVIDEIPVAPSVSAHSQESSSTEGVFFPTLSIAPASNVQ 60
           MDSDDLDNVPLAHLLKKTNVP+V DEIP  P VSAHSQESSSTEG               
Sbjct: 572 MDSDDLDNVPLAHLLKKTNVPKVTDEIPAVPFVSAHSQESSSTEGCI------------- 631

Query: 61  PGSSVCSPPSVSLPFAPDDAHVYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNTAVCTDE 120
                  PP VSLPFAPDDAH  V  NVPS+VS   EGQTDVQSN+NEVDPSN  VC DE
Sbjct: 632 ------PPPFVSLPFAPDDAHASVPHNVPSNVSAAPEGQTDVQSNKNEVDPSNPGVCADE 691

Query: 121 VPTNADDSLVVPPSSSEVPVALKPVKRKSQQNRCNKTTKIGRKKIPPNIPSVPIDGILFH 180
           V  NADDS VVPPSSSEV VA K VKRKSQQNRCNKTTK  RKKIPPNIPSV IDGI FH
Sbjct: 692 VSRNADDSPVVPPSSSEVSVAPKLVKRKSQQNRCNKTTKTRRKKIPPNIPSVSIDGISFH 751

Query: 181 HEENVQCWKFVVQRWLADEVNVFDKHQLCMSIMDLIERAGLAKTILNVGPFYPQLIREFI 240
            +ENVQCWKFVVQR LADEVNVFDKHQ CMSIMDLIERAGLAKTI NVGPFYPQLIREFI
Sbjct: 752 DKENVQCWKFVVQRRLADEVNVFDKHQSCMSIMDLIERAGLAKTIFNVGPFYPQLIREFI 811

Query: 241 INLPNEFSDPS--------------------------NVVDIDCSPSSPSTDVLASVLSG 300
           +N P+EF+DPS                          NVVDIDCS SSPS  +LASVLSG
Sbjct: 812 VNFPDEFNDPSSPDYQTAHVRGFKFEISPTVINRFLGNVVDIDCSSSSPSIGILASVLSG 871

Query: 301 GTLSTWPVNGIFAVALSIKYAIMHKIGIANWFPSSHASSVSTALGTFLYQICNDNKVDTC 360
            TLSTWPVNGI  VALSIKY I+HKIG    F                            
Sbjct: 872 ATLSTWPVNGIPVVALSIKYVILHKIGGYRCF---------------------------- 931

Query: 361 AFIYNQQLRHVGLFRVKVSIALPRFFSSLLLHLNGAVLTASDAPRPDPKTLSLNYRLFQG 418
              YNQ LRHVG F VKV IALPR FSSLLLHLNG VLTAS+AP  DPKTLSL YRLFQ 
Sbjct: 932 ---YNQLLRHVGSFGVKVPIALPRLFSSLLLHLNGVVLTASNAPGHDPKTLSLIYRLFQR 964

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3C4058.6e-26395.85uncharacterized protein LOC103496232 OS=Cucumis melo OX=3656 GN=LOC103496232 PE=... [more]
A0A5D3CUK95.8e-22789.32Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83... [more]
A0A1S3CMN67.5e-15065.24uncharacterized protein LOC103502671 OS=Cucumis melo OX=3656 GN=LOC103502671 PE=... [more]
A0A5D3DCA13.5e-14764.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D4K01.1e-14567.27Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G... [more]
Match NameE-valueIdentityDescription
XP_008456227.11.8e-26295.85PREDICTED: uncharacterized protein LOC103496232 [Cucumis melo][more]
KAA0037163.11.2e-22689.32envelope-like protein [Cucumis melo var. makuwa] >TYK13909.1 envelope-like prote... [more]
XP_008464913.11.6e-14965.24PREDICTED: uncharacterized protein LOC103502671 [Cucumis melo][more]
KAA0051546.17.2e-14764.33uncharacterized protein E6C27_scaffold174G00770 [Cucumis melo var. makuwa] >TYK2... [more]
KAA0039208.12.3e-14567.27gag-pol polyprotein [Cucumis melo var. makuwa] >TYK18475.1 gag-pol polyprotein [... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0004440.1Pay0004440.1mRNA