Pay0004400 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004400
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	glycine-rich cell wall structural protein 1
Location	chr05: 9533319 .. 9535002 (+)
RNA-Seq Expression	Pay0004400
Synteny	Pay0004400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACACCAAAAAGTAGTGGGAGAAGTGGGAAGTTGAGAATAGTTTTAGAAAAATCCCAAAAGAAAAAAAGGTGAAGTGGGGGATGAAAAAGTTAGGGAACTGTTAGTAGTTGAGTTGTAATAAATGAGAAAGCAAAAGGGGTTGGTTTTAATGAAGTATGGAGAGAGATATAAATAGATGTGTGGATGTGGTTTAAGTTTCTCATCCATTGTGCATTATTATATTCTTCATTGCCCTCCACCTGCAAGATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGCTTAGGTGGTGGTGCTGGTGCTGGTGGAGGATTTGGAAAAGGTGGTGGACTCGGTGGTGGAATTGGTAAAGGTGGAGGCTTAGGTGGTGGTGCTGGTGCTGGTGGAGGATTTGGAAAAGGTGGTGGACTCGGTGGTGGAATTGGTAAAGGTGGAGGCTTAGGTGGTGGTGCCGGTGGAGGAATTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAGGGTGGAGGCTTAGGTGGTGGTGCTGGCGGAGGAATTGGTAAAGGTGGTGTAATTGGTAAGGGTGGAGGTCTTGGTGGCGGAGTAGGAGGTGGTGCTGGTGGAGGGTTTGGAAAGGGTGGCGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGTCTAGGTGGTGGAGTTGGAGGTGGTGCTGGTGGAGGGTTTGGAAAAGGTGGTGGACTCGGTGGTGGCATTGGGAAAGGCGGAGGACTAGGTGGTGGAGTTGGAGGTGGTGCTGGTGGAGGTTTTGGCAAGGGTGGAGGACTTGGTGGTGGAATTGGAAAAGGTGGAGGACTTGGTGGTGGTGCTGGTGGAGGGTTTGGCAAAGGTGGAGGACTTGGTGGTGGAATCGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGATTTGGAAGCGGGTTCGGTGGTGGTGTTGGTGGAGGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA

mRNA sequence

AAAAACACCAAAAAGTAGTGGGAGAAGTGGGAAGTTGAGAATAGTTTTAGAAAAATCCCAAAAGAAAAAAAGGTGAAGTGGGGGATGAAAAAGTTAGGGAACTGTTAGTAGTTGAGTTGTAATAAATGAGAAAGCAAAAGGGGTTGGTTTTAATGAAGTATGGAGAGAGATATAAATAGATGTGTGGATGTGGTTTAAGTTTCTCATCCATTGTGCATTATTATATTCTTCATTGCCCTCCACCTGCAAGATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGACTTGGTGGTGGAATCGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGATTTGGAAGCGGGTTCGGTGGTGGTGTTGGTGGAGGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA

Coding sequence (CDS)

ATGTGGTTTAAGTTTCTCATCCATTGTGCATTATTATATTCTTCATTGCCCTCCACCTGCAAGATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGACTTGGTGGTGGAATCGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGATTTGGAAGCGGGTTCGGTGGTGGTGTTGGTGGAGGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA

Protein sequence

MWFKFLIHCALLYSSLPSTCKMASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIGHH

Homology

[Close]

BLAST of Pay0004400 vs. ExPASy TrEMBL
Match: A0A1S4E2X3 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499434 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.1e-82
Identity = 300/302 (99.34%), Postives = 301/302 (99.67%), Query Frame = 0


Query: 1   MWFKFLIHCALLYSSLPSTCKMASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGK 60
           MWFKFLIHCALLYSSLPSTCKMASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGK
Sbjct: 1   MWFKFLIHCALLYSSLPSTCKMASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGK 60

Query: 61  SGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGG 120
           SGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGG
Sbjct: 61  SGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGG 120

Query: 121 GIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGLGG 180
           GIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK +GG
Sbjct: 121 GIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-VGG 180

Query: 181 GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 240
           GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV
Sbjct: 181 GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 240

Query: 241 GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIG 300
           GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIG
Sbjct: 241 GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIG 300

Query: 301 HH 303
           HH
Sbjct: 301 HH 301

[Close]

BLAST of Pay0004400 vs. ExPASy TrEMBL
Match: A0A0A0LIH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-47
Identity = 247/293 (84.30%), Postives = 252/293 (86.01%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81
           MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGG  GGG
Sbjct: 1   MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGG--GGG 60

Query: 82  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141
           GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120

Query: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGLGGGIGKGGGLGGGAGGGFGKGGG 201
           LGGG+GGGFGKGGGLGGGAGGGF                  GKGGGLGGGAGGGFGKGGG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGF------------------GKGGGLGGGAGGGFGKGGG 180

Query: 202 LGGGIGKGGGF--GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGG 261
           LGGGIGKGGG   GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGA GGGGGGGGGGGGGG
Sbjct: 181 LGGGIGKGGGLGGGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGA-GGGGGGGGGGGGGG 240

Query: 262 GGFGKGGGFGSGFGSGFGGGVGG----------GGGGGFGGGGGFGGGGIGHH 303
           GGFG GGGFG GFG GFGGG+GG          GGGGGFGGGGGFGGGGIGHH
Sbjct: 241 GGFGNGGGFGGGFGKGFGGGIGGGSGSGFGGGVGGGGGFGGGGGFGGGGIGHH 272

[Close]

BLAST of Pay0004400 vs. ExPASy TrEMBL
Match: A0A5D3BTN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00390 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.4e-47
Identity = 281/477 (58.91%), Postives = 281/477 (58.91%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81
           MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60

Query: 82  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141
           GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120

Query: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK------------------------- 201
           LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK                         
Sbjct: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGGIG 180

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 181 KGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGAGGGIGKGGGLGGGIGKGGGLGGGAG 240

Query: 262 ------------------------------------------------------------ 303
                                                                       
Sbjct: 241 GGIGKGGVIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKGGG 300

[Close]

BLAST of Pay0004400 vs. ExPASy TrEMBL
Match: A0A6J1KZ60 (glycine-rich cell wall structural protein-like isoform X16 OS=Cucurbita maxima OX=3661 GN=LOC111498925 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-25
Identity = 245/374 (65.51%), Postives = 255/374 (68.18%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 81
           MA+G  RVALLS LCF+VLV +VVAKE  +G+EEKFLFFGKSGGLG GFGGGSGFGGGFG
Sbjct: 1   MATGCNRVALLSFLCFYVLVCSVVAKEVGNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60

Query: 82  GGGGGGGGGGGGGGG---------GFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGG 141
           GGGGGGGGG GGGGG         G G GGG GGG G G GFGKGGG+GGG GGG G GG
Sbjct: 61  GGGGGGGGGSGGGGGFGGGSGIGIGGGAGGGAGGGVGGGAGFGKGGGLGGGAGGGFGKGG 120

Query: 142 GVGGGIGKGGGL--------------------GGGAGGGFGKGGGLGGGAGGGFGKGGGL 201
           G+GGGIGKGGGL                    GGG GGG GKGGGLGGGAGGG+GKGGGL
Sbjct: 121 GLGGGIGKGGGLGKGGGLGGGVGGGVGGGIGKGGGLGGGIGKGGGLGGGAGGGYGKGGGL 180

Query: 202 GGGIGK------------GLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGG 261
           GGGIGK            G GGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGG GGGAGG
Sbjct: 181 GGGIGKGGGLGGGAGGGFGKGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGG 240

Query: 262 GFGKGGGVGGGFGKGGGFGGGVGGGA---------------------------------- 303
           G+GKGGG+GGG GKGGG GGGVGGGA                                  
Sbjct: 241 GYGKGGGLGGGIGKGGGLGGGVGGGAGGGLGGGVGGGFGKGGGLGGGIGSGGGLGGGGGG 300

[Close]

BLAST of Pay0004400 vs. ExPASy TrEMBL
Match: A0A6J1H3F4 (glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita moschata OX=3662 GN=LOC111460136 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-25
Identity = 246/363 (67.77%), Postives = 259/363 (71.35%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 81
           MA+G  RVALLSL CF+VLV++VVAK+  +G+EEKFLFFGKSGGLG GFGGGSGFGGGFG
Sbjct: 1   MATGCNRVALLSLFCFYVLVFSVVAKDVTNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60

Query: 82  GGGGGGGGG-----GGGGGGGFGGGGGYGGGHGI----GGGFGKGGGVGGGI--GGGAGG 141
           GGGGGGG G     GGG GGG GGG G+G G G+    GGGFGKGGG+GGGI  GGG GG
Sbjct: 61  GGGGGGGFGGGSGIGGGAGGGVGGGAGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG 120

Query: 142 --GGGVGGGIGKGGGLGGGA----GGGFGKGGGLGGGAGGGFGKGGGLGGGIGK------ 201
             GGG+GGGIGKGGGLGGGA    GGG GKGGGLGGGAGGG+GKGGGLGGGIGK      
Sbjct: 121 GAGGGLGGGIGKGGGLGGGAGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGG 180

Query: 202 ----------GLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGK---- 261
                     GLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGG G GAGGGFGK    
Sbjct: 181 GAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGSGAGGGFGKGGGL 240

Query: 262 ----------------------GGGVGGGFGKGGGFGGGV--GGGAGGGGGGGGGGGGGG 303
                                 GGGVGGGFGKGGG GGG+  GGG GGGGGGGGGGGGGG
Sbjct: 241 GGGNEKGGGLGGGVGGGAGGGLGGGVGGGFGKGGGLGGGIGSGGGLGGGGGGGGGGGGGG 300

[Close]

BLAST of Pay0004400 vs. NCBI nr
Match: XP_016902584.1 (PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 2.3e-82
Identity = 300/302 (99.34%), Postives = 301/302 (99.67%), Query Frame = 0


Query: 1   MWFKFLIHCALLYSSLPSTCKMASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGK 60
           MWFKFLIHCALLYSSLPSTCKMASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGK
Sbjct: 1   MWFKFLIHCALLYSSLPSTCKMASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGK 60

Query: 61  SGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGG 120
           SGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGG
Sbjct: 61  SGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGG 120

Query: 121 GIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGLGG 180
           GIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK +GG
Sbjct: 121 GIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-VGG 180

Query: 181 GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 240
           GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV
Sbjct: 181 GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 240

Query: 241 GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIG 300
           GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIG
Sbjct: 241 GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIG 300

Query: 301 HH 303
           HH
Sbjct: 301 HH 301

[Close]

BLAST of Pay0004400 vs. NCBI nr
Match: KAA0050716.1 (hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK01449.1 hypothetical protein E5676_scaffold772G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 9.1e-47
Identity = 281/477 (58.91%), Postives = 281/477 (58.91%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81
           MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60

Query: 82  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141
           GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120

Query: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK------------------------- 201
           LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK                         
Sbjct: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGGIG 180

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 181 KGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGAGGGIGKGGGLGGGIGKGGGLGGGAG 240

Query: 262 ------------------------------------------------------------ 303
                                                                       
Sbjct: 241 GGIGKGGVIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKGGG 300

[Close]

BLAST of Pay0004400 vs. NCBI nr
Match: XP_031737441.1 (LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-41
Identity = 250/304 (82.24%), Postives = 257/304 (84.54%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81
           MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGG  GGG
Sbjct: 1   MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGG--GGG 60

Query: 82  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141
           GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120

Query: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK----------------GLGGGIGKG 201
           LGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGK                GLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180

Query: 202 GGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV----- 261
           GGLGGGAGGGFGKGGGLGGGIGKGGG GGGAGGG+GKGGG+GGG GKGGG GGGV     
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGVGGGFG 240

Query: 262 -GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGF--GSGFGGGVGGGGGGGFGGGGGFG-G 301
            GGG G GGG GGG GGG GGGFGKGGG G G   G G GGGVGGG GGGFG GGG G G
Sbjct: 241 KGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKGGGIGKG 300

[Close]

BLAST of Pay0004400 vs. NCBI nr
Match: KAE8651806.1 (hypothetical protein Csa_006078 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-41
Identity = 250/304 (82.24%), Postives = 257/304 (84.54%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81
           MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGG  GGG
Sbjct: 1   MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGG--GGG 60

Query: 82  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141
           GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120

Query: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK----------------GLGGGIGKG 201
           LGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGK                GLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180

Query: 202 GGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV----- 261
           GGLGGGAGGGFGKGGGLGGGIGKGGG GGGAGGG+GKGGG+GGG GKGGG GGGV     
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGVGGGFG 240

Query: 262 -GGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGF--GSGFGGGVGGGGGGGFGGGGGFG-G 301
            GGG G GGG GGG GGG GGGFGKGGG G G   G G GGGVGGG GGGFG GGG G G
Sbjct: 241 KGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKGGGIGKG 300

[Close]

BLAST of Pay0004400 vs. NCBI nr
Match: XP_038906572.1 (glycine-rich cell wall structural protein isoform X3 [Benincasa hispida] >XP_038906573.1 glycine-rich cell wall structural protein isoform X4 [Benincasa hispida])

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-36
Identity = 259/352 (73.58%), Postives = 265/352 (75.28%), Query Frame = 0


Query: 22  MASGWKRVALLSLLCFHVLVY--NVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 81
           MASG+KRVALLSLLCFHV+VY  NVVAKEDGKEEKFLFFGKSGGLGGGFGGG   GGGFG
Sbjct: 1   MASGFKRVALLSLLCFHVIVYSNNVVAKEDGKEEKFLFFGKSGGLGGGFGGGG--GGGFG 60

Query: 82  GGGGGGGGGGGGGGGGFGG--GGGYGGGH--------------------GIGGGFGKGGG 141
           GGGG GGGGG GGGGGFGG  GGG+GGGH                    GIGGGFGKGGG
Sbjct: 61  GGGGFGGGGGAGGGGGFGGGSGGGFGGGHGIGGGIGGGGGAGGGFGKGGGIGGGFGKGGG 120

Query: 142 VGGGIGGGAGGGGGVGGGIGKGGGLGGGAGGGF----------GKGGGLGGGAGGGFGKG 201
           +GGG+GGGAGGGGG+GGGIGKGGGLGGGAGGGF          GKGGGLGGGAGGGFGKG
Sbjct: 121 IGGGVGGGAGGGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKG 180

Query: 202 GGLGGGIGK--------------------GLGGGIGKGGGLGGGAGGGFGKGGGL----- 261
           GGLGGGIGK                    GLGGGIGKGGGLGGGAGGGFGKGGGL     
Sbjct: 181 GGLGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGAG 240

Query: 262 -----GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGG 303
                GGGIGKGGG GGGAGGGFGKGGG GGGFGKGGGFGGG GGGAGGG G GGGGGGG
Sbjct: 241 GGFGKGGGIGKGGGLGGGAGGGFGKGGGAGGGFGKGGGFGGGAGGGAGGGFGKGGGGGGG 300

[Close]

BLAST of Pay0004400 vs. TAIR 10
Match: AT3G23450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-09
Identity = 211/324 (65.12%), Postives = 228/324 (70.37%), Query Frame = 0


Query: 31  LLSLLCFHVLVYNVVAKE-----DGKEEKFLFFGKSGGLGGGFGGGS------------- 90
           LL+LLCFHV V NVVA++     D  E+  +  GK GG GGGFGGG+             
Sbjct: 10  LLALLCFHVFVVNVVARDVSSGRDEDEKTLVGGGKGGGFGGGFGGGAGGGVGGGAGGGFG 69

Query: 91  -GFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGG 150
            G GGGFGGGGGGGGGGGGGGGGGFGGGGG+GGGHG G G G GGG GGG+GGG G GGG
Sbjct: 70  GGAGGGFGGGGGGGGGGGGGGGGGFGGGGGFGGGHGGGVGGGVGGGHGGGVGGGFGKGGG 129

Query: 151 VGGGIGKGGGL------GGGAGGGFGKGGGL------GGGAGGGFGKGGGLGGGIGK--G 210
           +GGGIGKGGG+      GGG GGG GKGGG+      GGG GGG GKGGG+GGGIGK  G
Sbjct: 130 IGGGIGKGGGVGGGIGKGGGIGGGIGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGG 189

Query: 211 LGGGIGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGF------GGGAGGGFGKGGG 270
           +GGGIGKGGG+      GGG GGGFGKGGG+GGGIGKGGG       GGG GGG GKGGG
Sbjct: 190 IGGGIGKGGGIGGGIGKGGGVGGGFGKGGGVGGGIGKGGGVGGGFGKGGGVGGGIGKGGG 249

Query: 271 VGGGFGKGGGFGGGV--GGGAGGG---GGGGGGG---GGGGGGGFGKGGGFGSGFGSGFG 301
           +GGG GKGGG GGG+  GGG GGG   GGG GGG   GGG GGG GKGGG G G G G G
Sbjct: 250 IGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGG 309

The following BLAST results are available for this feature:

BLAST of Pay0004400 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2X3	1.1e-82	99.34	glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A0A0LIH7	1.5e-47	84.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1	[more]
A0A5D3BTN6	4.4e-47	58.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1KZ60	2.8e-25	65.51	glycine-rich cell wall structural protein-like isoform X16 OS=Cucurbita maxima O...	[more]
A0A6J1H3F4	4.7e-25	67.77	glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita moschata ...	[more]

BLAST of Pay0004400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902584.1	2.3e-82	99.34	PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]	[more]
KAA0050716.1	9.1e-47	58.91	hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK0144...	[more]
XP_031737441.1	2.6e-41	82.24	LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus]	[more]
KAE8651806.1	2.6e-41	82.24	hypothetical protein Csa_006078 [Cucumis sativus]	[more]
XP_038906572.1	2.5e-36	73.58	glycine-rich cell wall structural protein isoform X3 [Benincasa hispida] >XP_038...	[more]

BLAST of Pay0004400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23450.1	2.1e-09	65.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR39110	TRANSMEMBRANE PROTEIN	coord: 22..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004400.1	Pay0004400.1	mRNA