Pay0004239 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004239
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	protein no-on-transient A-like
Location	chr01: 31316879 .. 31317307 (-)
RNA-Seq Expression	Pay0004239
Synteny	Pay0004239

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCATCAAAACCACAATTTTCATATCTCTTCTCGCCCTACTCTTCTTCTACGAATATCTATACCCACTTCCTCCCCCGGTTCGCGGCGCCCATTCCAATTCCGTTACCGGGGTGCTGCACCGGAAAATCCTTCAGACGGCGGCTCATAAGACTGCAGGTGACAATGTCGAGTCCTCTTCAGAACGGAAGATGAATAACGTTCATATGAAAATAGGTACAAGCGGCGGTGGTGGCGGTGGCCGCGGTGGTGGTGGTGGTGGTGGCCGCGGTGGCCGCGGTGGTGGCGGTGGCCGCGATAGATCGTCGAAGCGGACAAACCTGGGAGGAGGTGGAACTGGCCACCATAAATCGGCGGCGAACCGGAGCCTGGTCGCGTCTTTTGGCGTTGGATTTCTTCTCTTCATTTTGGGATTGTTCATGTGA

mRNA sequence

ATGGCTGCCATCAAAACCACAATTTTCATATCTCTTCTCGCCCTACTCTTCTTCTACGAATATCTATACCCACTTCCTCCCCCGGTTCGCGGCGCCCATTCCAATTCCGTTACCGGGGTGCTGCACCGGAAAATCCTTCAGACGGCGGCTCATAAGACTGCAGGTGACAATGTCGAGTCCTCTTCAGAACGGAAGATGAATAACGTTCATATGAAAATAGGTACAAGCGGCGGTGGTGGCGGTGGCCGCGGTGGTGGTGGTGGTGGTGGCCGCGGTGGCCGCGGTGGTGGCGGTGGCCGCGATAGATCGTCGAAGCGGACAAACCTGGGAGGAGGTGGAACTGGCCACCATAAATCGGCGGCGAACCGGAGCCTGGTCGCGTCTTTTGGCGTTGGATTTCTTCTCTTCATTTTGGGATTGTTCATGTGA

Coding sequence (CDS)

ATGGCTGCCATCAAAACCACAATTTTCATATCTCTTCTCGCCCTACTCTTCTTCTACGAATATCTATACCCACTTCCTCCCCCGGTTCGCGGCGCCCATTCCAATTCCGTTACCGGGGTGCTGCACCGGAAAATCCTTCAGACGGCGGCTCATAAGACTGCAGGTGACAATGTCGAGTCCTCTTCAGAACGGAAGATGAATAACGTTCATATGAAAATAGGTACAAGCGGCGGTGGTGGCGGTGGCCGCGGTGGTGGTGGTGGTGGTGGCCGCGGTGGCCGCGGTGGTGGCGGTGGCCGCGATAGATCGTCGAAGCGGACAAACCTGGGAGGAGGTGGAACTGGCCACCATAAATCGGCGGCGAACCGGAGCCTGGTCGCGTCTTTTGGCGTTGGATTTCTTCTCTTCATTTTGGGATTGTTCATGTGA

Protein sequence

MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVESSSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSAANRSLVASFGVGFLLFILGLFM

Homology

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BLAST of Pay0004239 vs. ExPASy TrEMBL
Match: A0A1S3BRF6 (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.0e-63
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120
           SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA
Sbjct: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120

Query: 121 ANRSLVASFGVGFLLFILGLFM 143
           ANRSLVASFGVGFLLFILGLFM
Sbjct: 121 ANRSLVASFGVGFLLFILGLFM 142

[Close]

BLAST of Pay0004239 vs. ExPASy TrEMBL
Match: A0A5A7VN87 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00030 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
          MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES
Sbjct: 1  MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61 SSERKMNNVHMKIGTSGG 79
          SSERKMNNVHMKI    G
Sbjct: 61 SSERKMNNVHMKIDRRSG 78

[Close]

BLAST of Pay0004239 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.1e-11
Identity = 70/142 (49.30%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAAIK+ +FISLLALLFF E L       RGA SNSVTG+L R +LQTA H+ A      
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGA-SNSVTGMLRRNVLQTATHEIA------ 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120
            SE KM NVH+K                       GGGGR R       G G TG+ KSA
Sbjct: 61  DSEGKM-NVHIK----------------------RGGGGRIRP---VAAGTGFTGNRKSA 109

Query: 121 ANRSLVASFGVGFLLFILGLFM 143
           A+RS VASFG+GFLLF   LF+
Sbjct: 121 ASRSQVASFGLGFLLFFSRLFL 109

[Close]

BLAST of Pay0004239 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.9e-08
Identity = 60/146 (41.10%), Postives = 72/146 (49.32%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAAI+  + I+LLALLFF E L           S+S+TG+ HR IL T AH+    +VES
Sbjct: 1   MAAIRPLVSIALLALLFFSESLLT---------SHSLTGIPHRNILHTVAHRIVNGSVES 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTG-HHKS 120
           S +RK N +H K                            DR   R  L  G  G HHKS
Sbjct: 61  SYQRKSNKLHTK----------------------------DRRRIRPILISGSNGMHHKS 109

Query: 121 AANRSLVASFGVGFLLFI---LGLFM 143
           A NRS VASF VG +L I   LGLF+
Sbjct: 121 AENRSRVASFEVGSMLCICIFLGLFL 109

[Close]

BLAST of Pay0004239 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.6e-07
Identity = 68/143 (47.55%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAAIK+ I ISLLALLFF E L       RGA SNSVT +L R ILQTA H+ A      
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGA-SNSVTAMLRRNILQTATHEIA------ 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGG-GTGHHKS 120
            SE KM NV +K                       GG GR R      +G G GTG   S
Sbjct: 61  DSEGKM-NVRIK----------------------KGGLGRFRP-----IGAGTGTGTRSS 108

Query: 121 AANRSLVASFGVGFLLFILGLFM 143
           AANRS V SFG+GFLLF  GL +
Sbjct: 121 AANRSRVDSFGLGFLLFFFGLVL 108

[Close]

BLAST of Pay0004239 vs. NCBI nr
Match: XP_008451666.1 (PREDICTED: protein no-on-transient A-like [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120
           SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA
Sbjct: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120

Query: 121 ANRSLVASFGVGFLLFILGLFM 143
           ANRSLVASFGVGFLLFILGLFM
Sbjct: 121 ANRSLVASFGVGFLLFILGLFM 142

[Close]

BLAST of Pay0004239 vs. NCBI nr
Match: KAA0068046.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18082.1 protein no-on-transient A-like [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
          MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES
Sbjct: 1  MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61 SSERKMNNVHMKIGTSGG 79
          SSERKMNNVHMKI    G
Sbjct: 61 SSERKMNNVHMKIDRRSG 78

[Close]

BLAST of Pay0004239 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-11
Identity = 70/142 (49.30%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAAIK+ +FISLLALLFF E L       RGA SNSVTG+L R +LQTA H+ A      
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGA-SNSVTGMLRRNVLQTATHEIA------ 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120
            SE KM NVH+K                       GGGGR R       G G TG+ KSA
Sbjct: 61  DSEGKM-NVHIK----------------------RGGGGRIRP---VAAGTGFTGNRKSA 109

Query: 121 ANRSLVASFGVGFLLFILGLFM 143
           A+RS VASFG+GFLLF   LF+
Sbjct: 121 ASRSQVASFGLGFLLFFSRLFL 109

[Close]

BLAST of Pay0004239 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.8 bits (177), Expect = 2.7e-09
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAA+K+ + ++LLALL F E L       R   SNS+TG+L R +LQTAAH+ A ++VES
Sbjct: 1   MAALKSLVSVALLALLLFSESL-TASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVES 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120
           S ERKM NVH+K                                    +    TG   SA
Sbjct: 61  SPERKM-NVHIK----------------------------------RRMRPVATGTRSSA 106

Query: 121 ANRSLVASFGVGFLLFILGLFM 143
           ANRS +AS GVG +L +LGLF+
Sbjct: 121 ANRSRIASIGVGSVLVVLGLFL 106

[Close]

BLAST of Pay0004239 vs. NCBI nr
Match: KAA0046715.1 (E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa] >TYK18251.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 3.9e-08
Identity = 60/146 (41.10%), Postives = 72/146 (49.32%), Query Frame = 0


Query: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
           MAAI+  + I+LLALLFF E L           S+S+TG+ HR IL T AH+    +VES
Sbjct: 1   MAAIRPLVSIALLALLFFSESLLT---------SHSLTGIPHRNILHTVAHRIVNGSVES 60

Query: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTG-HHKS 120
           S +RK N +H K                            DR   R  L  G  G HHKS
Sbjct: 61  SYQRKSNKLHTK----------------------------DRRRIRPILISGSNGMHHKS 109

Query: 121 AANRSLVASFGVGFLLFI---LGLFM 143
           A NRS VASF VG +L I   LGLF+
Sbjct: 121 AENRSRVASFEVGSMLCICIFLGLFL 109

The following BLAST results are available for this feature:

BLAST of Pay0004239 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004239 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRF6	6.0e-63	100.00	protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1	[more]
A0A5A7VN87	6.0e-31	94.87	Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7VLE5	4.1e-11	49.30	Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3D3Y6	1.9e-08	41.10	E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KAQ7	3.6e-07	47.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1	[more]

BLAST of Pay0004239 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451666.1	1.2e-62	100.00	PREDICTED: protein no-on-transient A-like [Cucumis melo]	[more]
KAA0068046.1	1.2e-30	94.87	protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18082.1 protein no...	[more]
KAA0068047.1	8.4e-11	49.30	protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no...	[more]
KAG6575859.1	2.7e-09	40.14	hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0046715.1	3.9e-08	41.10	E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa] >TYK18251.1 E3...	[more]

BLAST of Pay0004239 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004239.1	Pay0004239.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane