Pay0004179 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004179
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr11: 25087964 .. 25090507 (-)
RNA-Seq Expression	Pay0004179
Synteny	Pay0004179

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTACCAGTTCTTGCAATCCTACCATCCAACGAACAACAATCTGAATGTGGTCCTTTCAACATTTAAATCCTTACAAAGGAAACTGATCAAATCATCAATAGACAAGGACGAGGTATGTATGACATGTAAAACTTTTCGGTTACATTTTAAGGTCACCTAAGATTAACTATATTTTGATGGATTGTAGGACAAGGAAGTACCTCCACCATGACATAAGAGGAAGAAGCCGGTAAAATTCCCACCTAGTGAGGGAAAGAAATAAAGAGAACCGGCTGATGAACCCTCACAAATAGTTCTCGTTCTAAAAGTCAAAGAGAGGTGGATACCAAGATACGATCCCCTTTGGCGGTTGATGGAAATCTGTGGAGAGCGTACTTGTCCAGGAGGAAAAATCCAAAGACTAAACACGACAAGCGAATTATTGTATACACATTTCGAAAAAAGGATTTCTTCCAAACATTGGAGAATAACATATGGGCCACCAAAGATGTAAGTTTAGGGTTATGCAGTGAAATTTTCTATTTATATGTTATGTTGTTAATAATTTACTATTTTGTAGACCGTGGATCTACTGATGATGCATGTGCGGAGGAACATGCTCTCAAGGGCGGATCTATGCATCTATCAGTTTATGGTATTGAACTCATTGTTCATGGTTATTTCTCTCTACTTATAATTAAATTATTGTAATTAGATTGATGAACGATATACTACTTACAATTTTTCTTTTTTGTGTTCTCTAAGGATGCAATTCAGGTTAATGAAACGACTATTGGACATTTTGATGACAGAGGGGTTCTGATGGAAGATGGCAACAAGGTTGTTTGGACGAATCAAAATTCCATGCCCAACTATGGATCGATCCTACTATGAGATACTTCTTTGACTATACCATTGGTGTCATTGAGGACGCATATCGTGGTTGAAAGTTTATTGGGTGTTTGGGCCAGTTAACATAAAACAACATTGGTTGATGGTTACGGTTGACACCAAGCATTGTAAGGTATATGTATTCAACTCTATGTCCAACTACATCGACGAAACTATTGTTGACGGAGTTCTCCAAACAATTACACGTGTCATTCCCTCACTTGTGATAGCAATTGACCTAGACACTACAAGATCACAATTCAACTACGGCTTATGTCCAACAAATAGGTACCAAGAAGTGTTATAAACTAGAAAGTCGTTGGATTGTGTAATTTTAGGGTTAATGTTTAAGATCTTGGTGCATTGTTGTCCAGAGATCCACCAAATTTTAAAATAGAAAAGTATATGTTTTAAATCTCGATGCAATGTTCTTCCTAGAATCACAAAGATTTAAGACAGAAGTGAGGATGTCTTATGGATCTTGGTACTAACCTAGTCGAACTCGTGCCCTATTCTACCTTGTTCAGTGAAGTTCATCACAAGATTCATATAGAATTGACGAAAATACCCTCAAGTCAGATTTTTTTTAATTTATTATTATAATAGTTAGTGCCTTGTTGAAGAAGTTTGAAAGTCTCACACAACAAATCCCAAGAAAGAAAGTGATTTTGAAAGTTTTTTTTCCAAAAGTGTTTGATACTTTCCTCTCAGTTCAACATTCTGTTTCAATATTTTTTTGAAAAACTCAAGAAAAAACTAGGCGAAATTACGTTTCCATTGTCATTCCCATACTGAAGAGGTTGTTTATTATTATTGCAATAGATTTTCCTACGTAATCTCGGTGTTGATTGATAGATCTTGGCCGAATTTTATATTGATTTATCTTGAGATTAGTGTAGGGTTTCAAAACTCGGCCGAGCTTTTAATATTTTCCCTTGAGATTACAATTGTGTTATTAATTTTCTTCACATATTTTCAAGATGCCTCATGTATTTGTTGGTTTTAGTGGTGAATGGAAGGATACTGAGAAAGAGTATGTCGGAGGACAACTCAAAGGGTTAAATGTGGATGTTCGTATCAAGTTTGAGGATTTTTTTAGGGAATATCTATGGAATAAGTGGGATAAACTCTGTTAAGCATGATTTGGTCATTAGGTGTATATATAAAGTGAAACCTCTTGTAGGGGCTTTCGTTATTAGCAATCAAGAAGATTTTAAGTTTCTTTTTTAATGGGGATGGCGTGTCATAAGTTACTGTTTTGGTTTCTAAGGTATTAAAATCATCCCTTAGGAGTACTACGACCCAAGTGTGTAATATTCCAATGGCCCAAGAAAGCAAGAAATTGGATTCCCTTAATCCTGACCTTGAGTGCACACCTGAATTAAATGAAGTGGTTCGAGATTTGAGTTAATTGACTATGAATGTGTGTCCTTTAGATTTGGGAGACGATAGAGATGGATTGGGTAGCATGGTCAACGTAGAGTTTTCAAACGATGTTTTCCATGACGATGACATTGAATTGGGAATGGATGACTCATTAGATCATGATATTGATGCGTTAGATGTGTCTGATTCGGATGTTAATACTCGTCCTAGAGCCAATATTGATTCAATAGATAGTGATCATATACTGATGACTATAGAGATTGACTGTAGTTTCAGCCTATAA

mRNA sequence

ATGTTGTACCAGTTCTTGCAATCCTACCATCCAACGAACAACAATCTGAATGTGGTCCTTTCAACATTTAAATCCTTACAAAGGAAACTGATCAAATCATCAATAGACAAGGACGAGACCGTGGATCTACTGATGATGCATGTGCGGAGGAACATGCTCTCAAGGGCGGATCTATGCATCTATCAGTTTATGGATGCAATTCAGGTTAATGAAACGACTATTGGACATTTTGATGACAGAGGGGTTCTGATGGAAGATGGCAACAAGATGCCTCATGTATTTGTTGGTTTTAGTGGTGAATGGAAGGATACTGAGAAAGAGTATGTCGGAGGACAACTCAAAGGGTTAAATGTGGATGTTCATTTGGGAGACGATAGAGATGGATTGGGTAGCATGGTCAACGTAGAGTTTTCAAACGATGTTTTCCATGACGATGACATTGAATTGGGAATGGATGACTCATTAGATCATGATATTGATGCGTTAGATGTGTCTGATTCGGATGTTAATACTCGTCCTAGAGCCAATATTGATTCAATAGATAGTGATCATATACTGATGACTATAGAGATTGACTGTAGTTTCAGCCTATAA

Coding sequence (CDS)

ATGTTGTACCAGTTCTTGCAATCCTACCATCCAACGAACAACAATCTGAATGTGGTCCTTTCAACATTTAAATCCTTACAAAGGAAACTGATCAAATCATCAATAGACAAGGACGAGACCGTGGATCTACTGATGATGCATGTGCGGAGGAACATGCTCTCAAGGGCGGATCTATGCATCTATCAGTTTATGGATGCAATTCAGGTTAATGAAACGACTATTGGACATTTTGATGACAGAGGGGTTCTGATGGAAGATGGCAACAAGATGCCTCATGTATTTGTTGGTTTTAGTGGTGAATGGAAGGATACTGAGAAAGAGTATGTCGGAGGACAACTCAAAGGGTTAAATGTGGATGTTCATTTGGGAGACGATAGAGATGGATTGGGTAGCATGGTCAACGTAGAGTTTTCAAACGATGTTTTCCATGACGATGACATTGAATTGGGAATGGATGACTCATTAGATCATGATATTGATGCGTTAGATGTGTCTGATTCGGATGTTAATACTCGTCCTAGAGCCAATATTGATTCAATAGATAGTGATCATATACTGATGACTATAGAGATTGACTGTAGTTTCAGCCTATAA

Protein sequence

MLYQFLQSYHPTNNNLNVVLSTFKSLQRKLIKSSIDKDETVDLLMMHVRRNMLSRADLCIYQFMDAIQVNETTIGHFDDRGVLMEDGNKMPHVFVGFSGEWKDTEKEYVGGQLKGLNVDVHLGDDRDGLGSMVNVEFSNDVFHDDDIELGMDDSLDHDIDALDVSDSDVNTRPRANIDSIDSDHILMTIEIDCSFSL

Homology

[Close]

BLAST of Pay0004179 vs. ExPASy TrEMBL
Match: A0A5D3C9T0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00520 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 7.9e-05
Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 40  TVDLLMMHVRRNMLSRADLCIYQ-------FMDAIQVNETTIGHFDDRGVLMEDGNKM 91
           T+DLLMMH ++ MLSR DL IY+       FMD IQ +E    H DD  V M+DGNK+
Sbjct: 74  TIDLLMMHKQKKMLSRMDLSIYRFTVFDASFMDVIQEDEMIAEHLDDDKVFMQDGNKV 131

[Close]

BLAST of Pay0004179 vs. NCBI nr
Match: KAA0054641.1 (hypothetical protein E6C27_scaffold24G004480 [Cucumis melo var. makuwa] >TYK08621.1 hypothetical protein E5676_scaffold3734G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-04
Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 40  TVDLLMMHVRRNMLSRADLCIYQ-------FMDAIQVNETTIGHFDDRGVLMEDGNKM 91
           T+DLLMMH ++ MLSR DL IY+       FMD IQ +E    H DD  V M+DGNK+
Sbjct: 74  TIDLLMMHKQKKMLSRMDLSIYRFTVFDASFMDVIQEDEMIAEHLDDDKVFMQDGNKV 131

The following BLAST results are available for this feature:

BLAST of Pay0004179 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004179 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9T0	7.9e-05	51.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Pay0004179 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054641.1	1.6e-04	51.72	hypothetical protein E6C27_scaffold24G004480 [Cucumis melo var. makuwa] >TYK0862...	[more]

BLAST of Pay0004179 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004179.1	Pay0004179.1	mRNA