Pay0004169 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004169
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr08: 31113986 .. 31114860 (+)
RNA-Seq Expression	Pay0004169
Synteny	Pay0004169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGGTATACATTTAAAAATTGTATAGTTGTTTTTAGTGAAAATTTATTTTCAATGATTTCTAATTCATTTTAATATTTTACAGAGATCGAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGTCCGATAAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAATGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAACTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACAAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCAACAGCAACAAGAGAATGCAGCAGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCATGAGGAAATACAACAACAAAGAGTTCAAATTCGACGACGACAACTAGCTAAAAATCGTCAACGTCCAGGTTGTGGAACACATTGA

mRNA sequence

ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGAGATCGAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGTCCGATAAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAATGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAACTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACAAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCAACAGCAACAAGAGAATGCAGCAGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCATGAGGAAATACAACAACAAAGAGTTCAAATTCGACGACGACAACTAGCTAAAAATCGTCAACGTCCAGGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGAGATCGAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGTCCGATAAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAATGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAACTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACAAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCAACAGCAACAAGAGAATGCAGCAGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCATGAGGAAATACAACAACAAAGAGTTCAAATTCGACGACGACAACTAGCTAAAAATCGTCAACGTCCAGGTTGTGGAACACATTGA

Protein sequence

MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQQQRVQIRRRQLAKNRQRPGCGTH

Homology

[Close]

BLAST of Pay0004169 vs. ExPASy TrEMBL
Match: A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 744  MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESD+LEEVDQHGEEVPPMT
Sbjct: 804  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863

Query: 121  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 864  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923

Query: 181  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
            DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI
Sbjct: 924  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983

Query: 241  QQQRVQIRRRQLAKNRQRPGCGTH 265
            QQQRVQIRRRQLAKNRQRPGCGTH
Sbjct: 984  QQQRVQIRRRQLAKNRQRPGCGTH 1007

[Close]

BLAST of Pay0004169 vs. ExPASy TrEMBL
Match: A0A1S3BLK4 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESD+LEEVDQHGEEVPPMT
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
           QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
           DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240

Query: 241 QQQRVQIRRRQLAKNRQRPGCGTH 265
           QQQRVQIRRRQLAKNRQRPGCGTH
Sbjct: 241 QQQRVQIRRRQLAKNRQRPGCGTH 264

[Close]

BLAST of Pay0004169 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.9e-136
Identity = 249/264 (94.32%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE D+LEEVDQHG+EVPPM 
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM- 1133

Query: 121  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
             TQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGS
Sbjct: 1134 -TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGS 1193

Query: 181  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
            DPSSSYMHGHGRGRG+HNEYLYY+VPAAVPEQSDE QQQENAAVP QSDEQQQQENHEEI
Sbjct: 1194 DPSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEI 1253

Query: 241  QQQRVQIRRRQLAKNRQRPGCGTH 265
            QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 1254 QQQRVQSRRRQPARNRRRPGCGTH 1275

[Close]

BLAST of Pay0004169 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.9e-136
Identity = 249/264 (94.32%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE D+LEEVDQHG+EVPPM 
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM- 372

Query: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            TQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGS
Sbjct: 373 -TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGS 432

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
           DPSSSYMHGHGRGRG+HNEYLYY+VPAAVPEQSDE QQQENAAVP QSDEQQQQENHEEI
Sbjct: 433 DPSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEI 492

Query: 241 QQQRVQIRRRQLAKNRQRPGCGTH 265
           QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 493 QQQRVQSRRRQPARNRRRPGCGTH 514

[Close]

BLAST of Pay0004169 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.1e-133
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGA MSHLRSNNIRLRNVA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE D+LEEVDQHGEEVPPM 
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 485

Query: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            TQTQSEHNYVSPVMMMPTFG TYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 486 -TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 545

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
           DPSSSYMHGHGRGRGEHNEYLYY+VPAAVPEQS+E QQQENAAVP QSDEQQQQEN EEI
Sbjct: 546 DPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEI 605

Query: 241 QQQRVQIRRRQLAKNRQRPGCGTH 265
           QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 606 QQQRVQSRRRQPARNRRRPGCGTH 627

[Close]

BLAST of Pay0004169 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])

HSP 1 Score: 522.3 bits (1344), Expect = 2.4e-144
Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESD+LEEVDQHGEEVPPMT
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
           QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
           DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240

Query: 241 QQQRVQIRRRQLAKNRQRPGCGTH 265
           QQQRVQIRRRQLAKNRQRPGCGTH
Sbjct: 241 QQQRVQIRRRQLAKNRQRPGCGTH 264

[Close]

BLAST of Pay0004169 vs. NCBI nr
Match: TYK27427.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 522.3 bits (1344), Expect = 2.4e-144
Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 744  MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESD+LEEVDQHGEEVPPMT
Sbjct: 804  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863

Query: 121  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 864  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923

Query: 181  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
            DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI
Sbjct: 924  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983

Query: 241  QQQRVQIRRRQLAKNRQRPGCGTH 265
            QQQRVQIRRRQLAKNRQRPGCGTH
Sbjct: 984  QQQRVQIRRRQLAKNRQRPGCGTH 1007

[Close]

BLAST of Pay0004169 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-135
Identity = 249/264 (94.32%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE D+LEEVDQHG+EVPPM 
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM- 372

Query: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            TQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGS
Sbjct: 373 -TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGS 432

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
           DPSSSYMHGHGRGRG+HNEYLYY+VPAAVPEQSDE QQQENAAVP QSDEQQQQENHEEI
Sbjct: 433 DPSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEI 492

Query: 241 QQQRVQIRRRQLAKNRQRPGCGTH 265
           QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 493 QQQRVQSRRRQPARNRRRPGCGTH 514

[Close]

BLAST of Pay0004169 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-135
Identity = 249/264 (94.32%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE D+LEEVDQHG+EVPPM 
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM- 1133

Query: 121  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
             TQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGS
Sbjct: 1134 -TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGS 1193

Query: 181  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
            DPSSSYMHGHGRGRG+HNEYLYY+VPAAVPEQSDE QQQENAAVP QSDEQQQQENHEEI
Sbjct: 1194 DPSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEI 1253

Query: 241  QQQRVQIRRRQLAKNRQRPGCGTH 265
            QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 1254 QQQRVQSRRRQPARNRRRPGCGTH 1275

[Close]

BLAST of Pay0004169 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 485.0 bits (1247), Expect = 4.2e-133
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGA MSHLRSNNIRLRNVA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDKLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE D+LEEVDQHGEEVPPM 
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 485

Query: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            TQTQSEHNYVSPVMMMPTFG TYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 486 -TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 545

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
           DPSSSYMHGHGRGRGEHNEYLYY+VPAAVPEQS+E QQQENAAVP QSDEQQQQEN EEI
Sbjct: 546 DPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEI 605

Query: 241 QQQRVQIRRRQLAKNRQRPGCGTH 265
           QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 606 QQQRVQSRRRQPARNRRRPGCGTH 627

The following BLAST results are available for this feature:

BLAST of Pay0004169 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUI1	1.2e-144	98.86	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A1S3BLK4	1.2e-144	98.86	mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BAB0	9.9e-136	94.32	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T598	9.9e-136	94.32	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7VIP6	2.1e-133	93.56	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of Pay0004169 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449513.1	2.4e-144	98.86	PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X...	[more]
TYK27427.1	2.4e-144	98.86	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0036767.1	2.0e-135	94.32	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYJ95836.1	2.0e-135	94.32	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0067080.1	4.2e-133	93.56	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of Pay0004169 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 230..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004169.1	Pay0004169.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
molecular_function	GO:0008270	zinc ion binding