Pay0004128 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004128
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	proteasome assembly chaperone 3 isoform X1
Location	chr09: 3741959 .. 3743165 (-)
RNA-Seq Expression	Pay0004128
Synteny	Pay0004128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCATCTATGATTATTTGATTATGGTGAAGCAATGCATCTCTTGCGAGATTCTACATCTGTTATTGTATTCCTATTTTCTTAGCATATTTGGTTTTCACTGTATATTTTCTAGTCCAAGTTCAAGGAACTTTACTGTTTATTCTTGGTGCGCTCAGGCAGAATCTCACTCATATATCTTTTCCTTTCAGAGAATCAAAACGGATATAGTCATTTGTCGCCACGATGATTATTTTCTCGTCAGTAGGAGTTCAATTTTTTTTGTTACCACTGCATATATTTTTCTTGGGGGAGGATGGGGAAATGGGGTTTTTGGTATCTACCAACGTTTGTTATTTCCATCTCTGATGTTTGGAACTAATTGTTAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGTTACAAGCCAGGTGAGCAGTTACTTGTCATTTCTTCATTGTTCAATTCTCCACCTCACAATTCTTGAACTAGAAAATGCTTTAGATGGTATGGGAGGAACACCTACATTTATGATTTAATAGTTTATTGAGATTTATAGGTTAAATTTAACTTCGCAATAAGGGCTAAAGTATATCATTTTTTAAAATTTTCATTTTGTTATATTAGAAGGTTCTTAGACATCTATATGTTACATTCACGGGAAGGAGGAGGGGATGACAATTCATCCAACCTTCTCAGTGTCAACTGTTTTTGGCAAAAGAGATGAAGTAAGTCTGCTACACTATAGTAGTTTGTTACTGAATAATGCTGCAATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGTACGTCAGTTGATTGAAGAAATCAGGTAAACCTTCCAATTGAACTTTATTGAACTTTACAGTTCGAACACTTCCTTTTAAAGATCTGACTTCTGGACGTGAGAACAACTCTTTGGAAATCTGCAGATAGTAAGCATTACAATAACCAAAACGTGCCGTGTTTCTATTAAGTAGATAACCTATCTTAAAGTTTGGGATCTTGGCTTGTCAAGTTATGATTTATAGAAATCTGCAGATAGTGTATTACTTTCCATATTTGGTGTCATTGAACTGTGTTGGTTGCCCTTCAAGAGACGCTTCTTCAACGTGAATCAAGGCTTAATTGGGAGATCCAACCATCTGGACATTGTCATTGGGGGAGCATTTCCTTGTTTCTCCAACCTTTAGTGGTATCTCCTCTACAAAG

mRNA sequence

ATGTCTTTCATCTATGATTATTTGATTATGGTGAAGCAATGCATCTCTTGCGAGATTCTACATCTGTTATTGTATTCCTATTTTCTTAGCATATTTGGTTTTCACTGTATATTTTCTAGTCCAAGTTCAAGGAACTTTACTGTTTATTCTTGGTGCGCTCAGGCAGAATCTCACTCATATATCTTTTCCTTTCAGAGAATCAAAACGGATATAGTCATTTGTCGCCACGATGATTATTTTCTCGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGTTACAAGAGGAGGGGATGACAATTCATCCAACCTTCTCAGTGTCAACTGTTTTTGGCAAAAGAGATGAACCGATGCTGGTCGCATGTGTACGTCAGTTGATTGAAGAAATCAGGTAAACCTTCCAATTGAACTTTATTGAACTTTACAGTTCGAACACTTCCTTTTAAAGATCTGACTTCTGGACGTGAGAACAACTCTTTGGAAATCTGCAGATAGTAAGCATTACAATAACCAAAACGTGCCGTGTTTCTATTAAGTAGATAACCTATCTTAAAGTTTGGGATCTTGGCTTGTCAAGTTATGATTTATAGAAATCTGCAGATAGTGTATTACTTTCCATATTTGGTGTCATTGAACTGTGTTGGTTGCCCTTCAAGAGACGCTTCTTCAACGTGAATCAAGGCTTAATTGGGAGATCCAACCATCTGGACATTGTCATTGGGGGAGCATTTCCTTGTTTCTCCAACCTTTAGTGGTATCTCCTCTACAAAG

Coding sequence (CDS)

ATGTCTTTCATCTATGATTATTTGATTATGGTGAAGCAATGCATCTCTTGCGAGATTCTACATCTGTTATTGTATTCCTATTTTCTTAGCATATTTGGTTTTCACTGTATATTTTCTAGTCCAAGTTCAAGGAACTTTACTGTTTATTCTTGGTGCGCTCAGGCAGAATCTCACTCATATATCTTTTCCTTTCAGAGAATCAAAACGGATATAGTCATTTGTCGCCACGATGATTATTTTCTCGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGTTACAAGAGGAGGGGATGACAATTCATCCAACCTTCTCAGTGTCAACTGTTTTTGGCAAAAGAGATGAACCGATGCTGGTCGCATGTGTACGTCAGTTGATTGAAGAAATCAGGTAA

Protein sequence

MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSYIFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQEEGMTIHPTFSVSTVFGKRDEPMLVACVRQLIEEIR

Homology

[Close]

BLAST of Pay0004128 vs. ExPASy TrEMBL
Match: A0A1S4E255 (uncharacterized protein LOC103498075 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498075 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.5e-65
Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60
           MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY
Sbjct: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60

Query: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEP 120
           IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ   EEGMTIHPTFSVSTVFGKRDEP
Sbjct: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQARKEEGMTIHPTFSVSTVFGKRDEP 120

Query: 121 MLVACVRQLIEEI 131
           MLVACVRQLIEEI
Sbjct: 121 MLVACVRQLIEEI 133

[Close]

BLAST of Pay0004128 vs. ExPASy TrEMBL
Match: A0A1S4E2V7 (uncharacterized protein LOC103498075 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498075 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 121/133 (90.98%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60
           MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY
Sbjct: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60

Query: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEP 120
           IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ   EEGMTIHPTFSVSTVFGKRDE 
Sbjct: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQARKEEGMTIHPTFSVSTVFGKRDE- 120

Query: 121 MLVACVRQLIEEI 131
                   LIEEI
Sbjct: 121 --------LIEEI 124

[Close]

BLAST of Pay0004128 vs. ExPASy TrEMBL
Match: A0A1S3AUA3 (uncharacterized protein LOC103482762 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482762 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.9e-24
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 67  IKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEPMLVACV 126
           IKTDIVICRHDD+FLVIATQIGAMGTMLQ   EEGMTIHPTFSVSTVFGKRDEPMLVAC 
Sbjct: 22  IKTDIVICRHDDHFLVIATQIGAMGTMLQARKEEGMTIHPTFSVSTVFGKRDEPMLVACA 81

Query: 127 RQLIEEI 131
           RQLIE+I
Sbjct: 82  RQLIEQI 88

[Close]

BLAST of Pay0004128 vs. ExPASy TrEMBL
Match: A0A6J1JPF5 (uncharacterized protein LOC111487705 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487705 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.5e-23
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 67  IKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEPMLVACV 126
           IKTD+VICRHDD+FLVIATQIGAMGTMLQ   EEGM IHPTFSVSTVFGKR+EPML+AC 
Sbjct: 22  IKTDVVICRHDDHFLVIATQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRNEPMLIACA 81

Query: 127 RQLIEEI 131
           RQLIE+I
Sbjct: 82  RQLIEQI 88

[Close]

BLAST of Pay0004128 vs. ExPASy TrEMBL
Match: A0A0A0KUG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G524790 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 67  IKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEPMLVACV 126
           IKTDIVICRHDD+FLVIATQIGAMGTMLQ   EEGMTI PTFSVSTVFGKRDEPM+VAC 
Sbjct: 22  IKTDIVICRHDDHFLVIATQIGAMGTMLQARKEEGMTILPTFSVSTVFGKRDEPMMVACA 81

Query: 127 RQLIEEI 131
           RQLIE+I
Sbjct: 82  RQLIEQI 88

[Close]

BLAST of Pay0004128 vs. NCBI nr
Match: XP_016902314.1 (PREDICTED: uncharacterized protein LOC103498075 isoform X1 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 9.3e-65
Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60
           MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY
Sbjct: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60

Query: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEP 120
           IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ   EEGMTIHPTFSVSTVFGKRDEP
Sbjct: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQARKEEGMTIHPTFSVSTVFGKRDEP 120

Query: 121 MLVACVRQLIEEI 131
           MLVACVRQLIEEI
Sbjct: 121 MLVACVRQLIEEI 133

[Close]

BLAST of Pay0004128 vs. NCBI nr
Match: XP_016902315.1 (PREDICTED: uncharacterized protein LOC103498075 isoform X2 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 5.5e-57
Identity = 121/133 (90.98%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60
           MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY
Sbjct: 1   MSFIYDYLIMVKQCISCEILHLLLYSYFLSIFGFHCIFSSPSSRNFTVYSWCAQAESHSY 60

Query: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEP 120
           IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQ   EEGMTIHPTFSVSTVFGKRDE 
Sbjct: 61  IFSFQRIKTDIVICRHDDYFLVIATQIGAMGTMLQARKEEGMTIHPTFSVSTVFGKRDE- 120

Query: 121 MLVACVRQLIEEI 131
                   LIEEI
Sbjct: 121 --------LIEEI 124

[Close]

BLAST of Pay0004128 vs. NCBI nr
Match: XP_008437298.1 (PREDICTED: uncharacterized protein LOC103482762 isoform X1 [Cucumis melo] >XP_008437299.1 PREDICTED: uncharacterized protein LOC103482762 isoform X1 [Cucumis melo] >XP_008437300.1 PREDICTED: uncharacterized protein LOC103482762 isoform X1 [Cucumis melo] >XP_008437301.1 PREDICTED: uncharacterized protein LOC103482762 isoform X2 [Cucumis melo] >XP_016898867.1 PREDICTED: uncharacterized protein LOC103482762 isoform X1 [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 8.0e-24
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 67  IKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEPMLVACV 126
           IKTDIVICRHDD+FLVIATQIGAMGTMLQ   EEGMTIHPTFSVSTVFGKRDEPMLVAC 
Sbjct: 22  IKTDIVICRHDDHFLVIATQIGAMGTMLQARKEEGMTIHPTFSVSTVFGKRDEPMLVACA 81

Query: 127 RQLIEEI 131
           RQLIE+I
Sbjct: 82  RQLIEQI 88

[Close]

BLAST of Pay0004128 vs. NCBI nr
Match: XP_031742162.1 (uncharacterized protein LOC101204852 isoform X1 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23
Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 57  SHSYIF-SFQR---IKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVST 116
           SH +IF S QR   IKTDIVICRHDD+FLVIATQIGAMGTMLQ   EEGMTI PTFSVST
Sbjct: 28  SHIFIFGSHQRNKGIKTDIVICRHDDHFLVIATQIGAMGTMLQARKEEGMTILPTFSVST 87

Query: 117 VFGKRDEPMLVACVRQLIEEI 131
           VFGKRDEPM+VAC RQLIE+I
Sbjct: 88  VFGKRDEPMMVACARQLIEQI 108

[Close]

BLAST of Pay0004128 vs. NCBI nr
Match: XP_023525404.1 (uncharacterized protein LOC111789023 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-22
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 67  IKTDIVICRHDDYFLVIATQIGAMGTMLQ---EEGMTIHPTFSVSTVFGKRDEPMLVACV 126
           IKTDIVICRHDD+FLVIATQIGAMGTMLQ   EEGM IHPTFSVSTVFGKR+EPML+AC 
Sbjct: 22  IKTDIVICRHDDHFLVIATQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRNEPMLIACA 81

Query: 127 RQLIEEI 131
           RQLIE+I
Sbjct: 82  RQLIEQI 88

[Close]

BLAST of Pay0004128 vs. TAIR 10
Match: AT5G14710.1 (CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 6.3e-19
Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 68  KTDIVICRHDDYFLVIATQIGAMGTML---QEEGMTIHPTFSVSTVFGKRDEPMLVACVR 127
           KT+IVIC ++D+ L+IATQIGAMGT+L   +EEGM++ PTFSVS +FGKRDEPML A  R
Sbjct: 23  KTEIVICSYEDHILIIATQIGAMGTILHARKEEGMSVEPTFSVSVIFGKRDEPMLTATAR 82

Query: 128 QLIEEI 131
           +LIE I
Sbjct: 83  RLIEHI 88

The following BLAST results are available for this feature:

BLAST of Pay0004128 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E255	4.5e-65	97.74	uncharacterized protein LOC103498075 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E2V7	2.7e-57	90.98	uncharacterized protein LOC103498075 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3AUA3	3.9e-24	91.04	uncharacterized protein LOC103482762 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JPF5	9.5e-23	85.07	uncharacterized protein LOC111487705 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KUG9	1.2e-22	88.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G524790 PE=4 SV=1	[more]

BLAST of Pay0004128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902314.1	9.3e-65	97.74	PREDICTED: uncharacterized protein LOC103498075 isoform X1 [Cucumis melo]	[more]
XP_016902315.1	5.5e-57	90.98	PREDICTED: uncharacterized protein LOC103498075 isoform X2 [Cucumis melo]	[more]
XP_008437298.1	8.0e-24	91.04	PREDICTED: uncharacterized protein LOC103482762 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_031742162.1	1.8e-23	81.48	uncharacterized protein LOC101204852 isoform X1 [Cucumis sativus]	[more]
XP_023525404.1	1.5e-22	86.57	uncharacterized protein LOC111789023 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0004128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14710.1	6.3e-19	66.67	CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788)...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.230.90		coord: 53..131 e-value: 2.2E-11 score: 45.8
IPR018788	Proteasome assembly chaperone 3	PFAM	PF10178	PAC3	coord: 82..130 e-value: 1.6E-11 score: 44.2
IPR018788	Proteasome assembly chaperone 3	PANTHER	PTHR31051	PROTEASOME ASSEMBLY CHAPERONE 3	coord: 64..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004128.1	Pay0004128.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0000502	proteasome complex