Pay0004026 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004026
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr05: 15167564 .. 15169414 (+)
RNA-Seq Expression	Pay0004026
Synteny	Pay0004026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAATTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGTAGAGGATGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTAATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGTTAGATGTAATTTTGGGAATGGATTTCTTATTTGCTCATTATGCATCTATGGATTGCCATAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTTTTAGAGGTATGAGGAAGGCCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAACTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAGATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAATTATTACCAGGAACAGCACCTATTTCACAGGCCCGTATAGAATGGCTCCAAGCGAGCTAA

mRNA sequence

ATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAATTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGTAGAGGATGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTAATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGTTAGATGTAATTTTGGGAATGGATTTCTTATTTGCTCATTATGCATCTATGGATTGCCATAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTTTTAGAGGTATGAGGAAGGCCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAACTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAGATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAATTATTACCAGGAACAGCACCTATTTCACAGGCCCGTATAGAATGGCTCCAAGCGAGCTAA

Coding sequence (CDS)

ATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAATTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGTAGAGGATGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTAATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGTTAGATGTAATTTTGGGAATGGATTTCTTATTTGCTCATTATGCATCTATGGATTGCCATAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTTTTAGAGGTATGAGGAAGGCCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAACTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAGATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAATTATTACCAGGAACAGCACCTATTTCACAGGCCCGTATAGAATGGCTCCAAGCGAGCTAA

Protein sequence

MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSSDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQARIEWLQAS

Homology

[Close]

BLAST of Pay0004026 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 16  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 75

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 76  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 135

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 136 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 195

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 196 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 255

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 256 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 315

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 316 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 375

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 376 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 435

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 436 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 495

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 496 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 555

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 556 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 615

[Close]

BLAST of Pay0004026 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 54  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 113

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 114 VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 173

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 174 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 233

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 234 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 293

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 294 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 353

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 354 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 413

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 414 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 473

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 474 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 533

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 534 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 593

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 594 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 653

[Close]

BLAST of Pay0004026 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 54  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 113

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 114 VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 173

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 174 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 233

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 234 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 293

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 294 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 353

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 354 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 413

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 414 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 473

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 474 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 533

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 534 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 593

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 594 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 653

[Close]

BLAST of Pay0004026 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 54  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 113

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 114 VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 173

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 174 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 233

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 234 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 293

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 294 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 353

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 354 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 413

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 414 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 473

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 474 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 533

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 534 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 593

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 594 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 653

[Close]

BLAST of Pay0004026 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 265 MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 324

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 325 VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 384

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 385 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 444

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 445 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 504

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 505 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 564

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 565 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 624

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 625 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 684

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 685 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 744

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 745 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 804

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 805 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 864

[Close]

BLAST of Pay0004026 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 54  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 113

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 114 VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 173

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 174 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 233

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 234 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 293

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 294 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 353

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 354 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 413

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 414 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 473

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 474 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 533

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 534 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 593

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 594 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 653

[Close]

BLAST of Pay0004026 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 54  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 113

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 114 VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 173

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 174 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 233

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 234 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 293

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 294 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 353

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 354 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 413

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 414 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 473

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 474 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 533

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 534 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 593

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 594 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 653

[Close]

BLAST of Pay0004026 vs. NCBI nr
Match: TYK06334.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 16  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 75

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 76  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 135

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 136 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 195

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 196 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 255

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 256 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 315

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 316 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 375

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 376 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 435

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 436 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 495

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 496 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 555

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 556 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 615

[Close]

BLAST of Pay0004026 vs. NCBI nr
Match: TYK27507.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 16  MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 75

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 76  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 135

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 136 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 195

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 196 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 255

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 256 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 315

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 316 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 375

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 376 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 435

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 436 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 495

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 496 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 555

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 556 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 615

[Close]

BLAST of Pay0004026 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 1   MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 60
           MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT
Sbjct: 265 MQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGAT 324

Query: 61  VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 120
           VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA
Sbjct: 325 VFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARA 384

Query: 121 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS----------------------SD 180
           LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS                      SD
Sbjct: 385 LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESD 444

Query: 181 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 240
           RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR
Sbjct: 445 RCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFR 504

Query: 241 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 300
           GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE
Sbjct: 505 GREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQE 564

Query: 301 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 360
           SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI
Sbjct: 565 SIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTI 624

Query: 361 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 420
           EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL
Sbjct: 625 EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVL 684

Query: 421 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 480
           FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD
Sbjct: 685 FDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVD 744

Query: 481 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 540
           LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Sbjct: 745 LLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK 804

Query: 541 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 587
           AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP
Sbjct: 805 AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFTIELLP 864

The following BLAST results are available for this feature:

BLAST of Pay0004026 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	0.0e+00	96.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	0.0e+00	96.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	0.0e+00	96.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	0.0e+00	96.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UNA3	0.0e+00	96.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73...	[more]

BLAST of Pay0004026 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066849.1	0.0e+00	96.38	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	0.0e+00	96.38	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
TYK06334.1	0.0e+00	96.38	putative polyprotein [Cucumis melo var. makuwa]	[more]
TYK27507.1	0.0e+00	96.38	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0056684.1	0.0e+00	96.38	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0004026 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 306..322 e-value: 8.9E-6 score: 35.2
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 306..322 e-value: 3.0E-7 score: 30.2
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 307..322 score: 11.465827
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 95..156 e-value: 2.6E-6 score: 27.6
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 367..500 e-value: 1.2E-15 score: 59.4
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 379..479
None	No IPR available	PFAM	PF08284	RVP_2	coord: 366..494 e-value: 1.9E-39 score: 134.6
None	No IPR available	GENE3D	4.10.60.10		coord: 303..366 e-value: 1.1E-7 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..48
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 385..585
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 385..585
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 387..476 e-value: 5.49415E-12 score: 60.0428
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 291..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004026.1	Pay0004026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding