Pay0003994 (gene) Melon (Payzawat) v1

Overview


Name	Pay0003994
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr10: 2259498 .. 2260921 (-)
RNA-Seq Expression	Pay0003994
Synteny	Pay0003994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGATAGTCATGGCCATACTTTGCTGTGTTTCTATCTTGATTCTTTTGATACCTTCTGCTTCCTCACATGCTCTGGATCAGTCTTCTCCCTTGCAAGGTGTGTGTACTTGTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTGAGAATAATGAAGTTATTTGTGATCTTGCAGCAACTGAAGCTGTGCATTCTCCTCGTCTTGTTTTAGGAAGGAAGTTCAAAATGTTAAAAGAAGCTGCAAGATTGGATAAGAGGGTATGTTTGAGAGTGCTTTTAAAACAAGTCATTTTGACATAAATTACTTTTGAGTAAACTATTCAAGTACCTTAGTAAAAAATAGTGTTCCATGTTAAATCAATCTTGTTTTTGTTTTCATTCTCTCAATCATTCTTCCTCAAAATGCTTTTTCGTTTCAAACACCTAGTCAAATTGACCCTGGTTTTGATCAAGTTATAATAACTACTTTAAGCCATATAAAAAACATTCACAAAACATAGTCGTAATTCTGTTTGAAATGACTTTACATGTACTTAAAATTCAAGTCATTTCAAAAAGGCTAACCATGATTATATCTGTCTTCTCTTGTTGCTGTTGAAGTTGTGATTACTGATGATTTTCCTGGAAACAGGTTGAAACCCAAGGATTCCAAGTTGCCAAACAAAATGATAACCACAAGGAAAACGTTTCAGGTGATTCATAATTACTATATTTTTTTTACAAAAAAAATCCAAAAATATGCAAGTTTCTTAAATAACTCATCCCTGTCCTATCTACAATCTTGCCAGTTCTTTCACTAAAAACTGCAACAATATTGCTTCCTAGAATATGGAAAATTTGAGGCATAGCCATATTTCAGTAACACCACATTAATTAAAGAAAAATAAGTACTCTATTTCACATTTTAGATACATTTCTGCACTCTCAATTACTGTCCCTGCCATTTAATTCATTCCATTTTAGTTTAGCTACTGTTCGCTTTAAATCAATTCCTTCCCCTTAATAGTTAATATCATCTTGTTTAAATTAGTTGAGGGGTTTTCAAAGTTATGTCCTTTATCTCATTTTCTCACCAAACTAACATTACTCAATTGGTTTAGATAGATATTTGTTCTTAACCAAAGTCCAATATTGATGAACTAAAGAAACAATGTATAATTTTAGTACGACAAATATGGGGTCTTAGTAATATATGATTATGAAAATGGAATTAATGTAATTGCAACATTTACAGGTGAGGAGGAAAAGGGTATGAAGTTGAACAAAAGAAAGGGGAGAAAGGGGGTGAATGTGGCCGACATGTCGTCGCAGGTTTTCACAATGGACTACGCTCACCTAAAACGACGTCGTCCTGTCCACAACATGTCGCTCAACCGTCCTTGA

mRNA sequence

ATGGGTTTGATAGTCATGGCCATACTTTGCTGTGTTTCTATCTTGATTCTTTTGATACCTTCTGCTTCCTCACATGCTCTGGATCAGTCTTCTCCCTTGCAAGCAACTGAAGCTGTGCATTCTCCTCGTCTTGTTTTAGGAAGGAAGTTCAAAATGTTAAAAGAAGCTGCAAGATTGGATAAGAGGGTTGAAACCCAAGGATTCCAAGTTGCCAAACAAAATGATAACCACAAGGAAAACGTTTCAGGTGAGGAGGAAAAGGGTATGAAGTTGAACAAAAGAAAGGGGAGAAAGGGGGTGAATGTGGCCGACATGTCGTCGCAGGTTTTCACAATGGACTACGCTCACCTAAAACGACGTCGTCCTGTCCACAACATGTCGCTCAACCGTCCTTGA

Coding sequence (CDS)

ATGGGTTTGATAGTCATGGCCATACTTTGCTGTGTTTCTATCTTGATTCTTTTGATACCTTCTGCTTCCTCACATGCTCTGGATCAGTCTTCTCCCTTGCAAGCAACTGAAGCTGTGCATTCTCCTCGTCTTGTTTTAGGAAGGAAGTTCAAAATGTTAAAAGAAGCTGCAAGATTGGATAAGAGGGTTGAAACCCAAGGATTCCAAGTTGCCAAACAAAATGATAACCACAAGGAAAACGTTTCAGGTGAGGAGGAAAAGGGTATGAAGTTGAACAAAAGAAAGGGGAGAAAGGGGGTGAATGTGGCCGACATGTCGTCGCAGGTTTTCACAATGGACTACGCTCACCTAAAACGACGTCGTCCTGTCCACAACATGTCGCTCAACCGTCCTTGA

Protein sequence

MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLDKRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRRRPVHNMSLNRP

Homology

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BLAST of Pay0003994 vs. ExPASy TrEMBL
Match: A0A5D3CCI7 (Putative root meristem growth factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00260 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD
Sbjct: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRR 120
           KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQ+FTMDYAHLKRR
Sbjct: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQIFTMDYAHLKRR 120

Query: 121 RPVHNMSLNRP 132
           RPVHNMSLNRP
Sbjct: 121 RPVHNMSLNRP 131

[Close]

BLAST of Pay0003994 vs. ExPASy TrEMBL
Match: A0A0A0KWA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606860 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.4e-52
Identity = 115/131 (87.79%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLIVMAILCCVSIL+LLIPSASSHALDQSSPLQATE VHSP LVLGRKFKML+EAAR+D
Sbjct: 1   MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVD 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRR 120
           K+VE QGFQVAKQ DNHKENVSG+EE+G KLNK KGRK V VADMSSQ+FTMDYAHLKRR
Sbjct: 61  KKVEAQGFQVAKQKDNHKENVSGQEEQGTKLNKGKGRKWVKVADMSSQIFTMDYAHLKRR 120

Query: 121 RPVHNMSLNRP 132
           RPVHNMSL RP
Sbjct: 121 RPVHNMSLKRP 130

[Close]

BLAST of Pay0003994 vs. ExPASy TrEMBL
Match: A0A6J1GWC1 (uncharacterized protein LOC111458171 OS=Cucurbita moschata OX=3662 GN=LOC111458171 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.1e-37
Identity = 95/131 (72.52%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLI+MA+LCCVS+LIL +P ASSHALDQSSPLQATEAVHSPRLVL RKFKML+EA    
Sbjct: 1   MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA---- 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRR 120
           K VE  GFQ +KQ D  KE VSG+  K  + NK KGRK  NVADMSS+ FTMDYAH+KRR
Sbjct: 61  KVVEAHGFQASKQEDEQKETVSGQAYK-REENKGKGRKWGNVADMSSRFFTMDYAHIKRR 120

Query: 121 RPVHNMSLNRP 132
           RPVHNMS  RP
Sbjct: 121 RPVHNMSRQRP 126

[Close]

BLAST of Pay0003994 vs. ExPASy TrEMBL
Match: A0A6J1IR14 (uncharacterized protein LOC111477668 OS=Cucurbita maxima OX=3661 GN=LOC111477668 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.0e-36
Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLI MA+LCCVS+LIL +P ASSHALDQSSPLQ TEAVHSPRLVL RKFKML+EA    
Sbjct: 1   MGLIFMAMLCCVSLLILSVPFASSHALDQSSPLQETEAVHSPRLVLSRKFKMLEEA---- 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRR 120
           K VE  GFQ +KQ D  KENVSG+  K  + NK KGRK  NVADMSS+  TMDYAH+KRR
Sbjct: 61  KVVEAHGFQASKQEDEQKENVSGQPYK-REENKGKGRKWGNVADMSSRFLTMDYAHIKRR 120

Query: 121 RPVHNMSLNRP 132
           RPVHNMS  RP
Sbjct: 121 RPVHNMSRQRP 126

[Close]

BLAST of Pay0003994 vs. ExPASy TrEMBL
Match: A0A6J1D6T9 (uncharacterized protein LOC111017571 OS=Momordica charantia OX=3673 GN=LOC111017571 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.9e-29
Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLIVMA LCCVS+LILLIP ASSHAL+QS  LQATEAV   R    RKF++++EA    
Sbjct: 1   MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQATEAV---RFRPTRKFRLMEEAG--- 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGE----EEKGMKLNKRKGRKGVNVADMSSQVFTMDYAH 120
             V+  G  V  QNDNH++NVSG+    E+KGM L++RKGRK ++V DMSS+ FTMDY H
Sbjct: 61  -AVKAHGSPVPIQNDNHEDNVSGQPYKREQKGMNLSRRKGRKWLDVDDMSSRFFTMDYVH 120

Query: 121 LKRRRPVHNMSLNRP 132
            +RRRPVHNMS  RP
Sbjct: 121 TRRRRPVHNMSRQRP 128

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BLAST of Pay0003994 vs. NCBI nr
Match: KAA0034486.1 (putative root meristem growth factor 8 [Cucumis melo var. makuwa] >TYK09040.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD
Sbjct: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRR 120
           KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQ+FTMDYAHLKRR
Sbjct: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQIFTMDYAHLKRR 120

Query: 121 RPVHNMSLNRP 132
           RPVHNMSLNRP
Sbjct: 121 RPVHNMSLNRP 131

[Close]

BLAST of Pay0003994 vs. NCBI nr
Match: KAE8648772.1 (hypothetical protein Csa_008620 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49
Identity = 110/126 (87.30%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 6   MAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLDKRVET 65
           MAILCCVSIL+LLIPSASSHALDQSSPLQATE VHSP LVLGRKFKML+EAAR+DK+VE 
Sbjct: 1   MAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEA 60

Query: 66  QGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRRRPVHN 125
           QGFQVAKQ DNHKENVSG+EE+G KLNK KGRK V VADMSSQ+FTMDYAHLKRRRPVHN
Sbjct: 61  QGFQVAKQKDNHKENVSGQEEQGTKLNKGKGRKWVKVADMSSQIFTMDYAHLKRRRPVHN 120

Query: 126 MSLNRP 132
           MSL RP
Sbjct: 121 MSLKRP 125

[Close]

BLAST of Pay0003994 vs. NCBI nr
Match: XP_022956442.1 (uncharacterized protein LOC111458171 [Cucurbita moschata] >KAG7032145.1 hypothetical protein SDJN02_06188 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.5 bits (415), Expect = 6.3e-37
Identity = 95/131 (72.52%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLI+MA+LCCVS+LIL +P ASSHALDQSSPLQATEAVHSPRLVL RKFKML+EA    
Sbjct: 1   MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA---- 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRR 120
           K VE  GFQ +KQ D  KE VSG+  K  + NK KGRK  NVADMSS+ FTMDYAH+KRR
Sbjct: 61  KVVEAHGFQASKQEDEQKETVSGQAYK-REENKGKGRKWGNVADMSSRFFTMDYAHIKRR 120

Query: 121 RPVHNMSLNRP 132
           RPVHNMS  RP
Sbjct: 121 RPVHNMSRQRP 126

[Close]

BLAST of Pay0003994 vs. NCBI nr
Match: XP_022977309.1 (uncharacterized protein LOC111477668 [Cucurbita maxima])

HSP 1 Score: 161.8 bits (408), Expect = 4.1e-36
Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATEAVHSPRLVLGRKFKMLKEAARLD 60
           MGLI MA+LCCVS+LIL +P ASSHALDQSSPLQ TEAVHSPRLVL RKFKML+EA    
Sbjct: 1   MGLIFMAMLCCVSLLILSVPFASSHALDQSSPLQETEAVHSPRLVLSRKFKMLEEA---- 60

Query: 61  KRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKRR 120
           K VE  GFQ +KQ D  KENVSG+  K  + NK KGRK  NVADMSS+  TMDYAH+KRR
Sbjct: 61  KVVEAHGFQASKQEDEQKENVSGQPYK-REENKGKGRKWGNVADMSSRFLTMDYAHIKRR 120

Query: 121 RPVHNMSLNRP 132
           RPVHNMS  RP
Sbjct: 121 RPVHNMSRQRP 126

[Close]

BLAST of Pay0003994 vs. NCBI nr
Match: XP_023525366.1 (uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-34
Identity = 94/132 (71.21%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MGLIVMAILCCVSILILLIPSASSHALDQSSPLQATE-AVHSPRLVLGRKFKMLKEAARL 60
           MGLI+MA+LCCVS+LIL +P ASSHALDQSSPLQ TE AVHSPRLVL RKFKML+EA   
Sbjct: 1   MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQVTEAAVHSPRLVLSRKFKMLEEA--- 60

Query: 61  DKRVETQGFQVAKQNDNHKENVSGEEEKGMKLNKRKGRKGVNVADMSSQVFTMDYAHLKR 120
            K VE  GFQ +KQ D  KENVSG+  K  + NK KGRK  NV DMSS+ FTMDYAH+KR
Sbjct: 61  -KVVEAHGFQASKQEDELKENVSGQAYK-REENKGKGRKWGNVDDMSSRFFTMDYAHIKR 120

Query: 121 RRPVHNMSLNRP 132
           RRPVHNMS  RP
Sbjct: 121 RRPVHNMSRQRP 127

The following BLAST results are available for this feature:

BLAST of Pay0003994 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0003994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCI7	1.0e-61	99.24	Putative root meristem growth factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KWA1	4.4e-52	87.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606860 PE=4 SV=1	[more]
A0A6J1GWC1	3.1e-37	72.52	uncharacterized protein LOC111458171 OS=Cucurbita moschata OX=3662 GN=LOC1114581...	[more]
A0A6J1IR14	2.0e-36	71.76	uncharacterized protein LOC111477668 OS=Cucurbita maxima OX=3661 GN=LOC111477668...	[more]
A0A6J1D6T9	8.9e-29	61.48	uncharacterized protein LOC111017571 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Pay0003994 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034486.1	2.2e-61	99.24	putative root meristem growth factor 8 [Cucumis melo var. makuwa] >TYK09040.1 pu...	[more]
KAE8648772.1	1.1e-49	87.30	hypothetical protein Csa_008620 [Cucumis sativus]	[more]
XP_022956442.1	6.3e-37	72.52	uncharacterized protein LOC111458171 [Cucurbita moschata] >KAG7032145.1 hypothet...	[more]
XP_022977309.1	4.1e-36	71.76	uncharacterized protein LOC111477668 [Cucurbita maxima]	[more]
XP_023525366.1	1.0e-34	71.21	uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0003994 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0003994.1	Pay0003994.1	mRNA