Pay0003774 (gene) Melon (Payzawat) v1

Overview
NamePay0003774
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr02: 6269300 .. 6272527 (-)
RNA-Seq ExpressionPay0003774
SyntenyPay0003774
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAACTTTCTATCATTTCTTCCCCATTTAGAGCACTAGTGTTGAGAACTAACGAATCATCTTCACCATTAATCAAATTTTGGATGACAAAGCAACCAAATATCGTCAAGGAAGCCACCAGCGATGATAATTTTTTCTTATGGAAGTTCCAAATTCTTACAGCATTAGAAGCTTATGATCTGGAAAATTTTCTTGAATCTGAATCAGAACCACCATCAAAATATCTCATATCCACTGGGAGTTCATCAGCATCTGCTACTAGAACACCAAATCCGACATATAAGGTATGGAAACGCCAAGATCGCCTTATCTCCTCATGGCTTCTAGGGTCTATGAGTGAAGAAATATTGAATCAGATGCTTCATTGCAAATCTGCAAAAGAAATTTGGGGAACTCTTCAAGGTATTTTCTCTTCCCGTTACTTGGCACAAGCTATGAAATTCAAAAACAAACTTCACAATATAAAGAAAGAATCCATGCCATTAAAAGAATACTTTCTCAAAATACAACATCGTGTTGATGCCTTAGCTTCAATTAACAAACCAGTTTCATCTGATGATCATATTCTGTACATATTGGCTGGTTTAGGATCTGATTATCAATCCATGATATCTGTTATTTTCCCCAGAACTGAATCTCCTTCTGTATAAGAAGTTATGTCTTTATTACTTACTCAGAAATCTCAAAATGAGAGCAAATTAATCAGCGAAAATGCTCTACCTTATGTTAATATTGTCACCCAAACAACTGAAAAAGGAGCAGAATCTTACATAAGGACCAACGAAAACAACTATCACAACAATCATTTCTACAATCAAAGGGGTGGCCGTGGCAATGGAAGATCAAACAGGGGAGGAAGAGGAAATCGTAATAAACCACAATGCCAAATCTGTACAAATTTTGGACATAGTGCTGATCGCTGCTTCTTTCGATATACTACAAGATCAAATTCATCAGGTTACTCACCGAACTCACATAATACTTCATATACTAATATGAATAATCATCCACAGATGTCTGCTATGGTGGCTACCCCCGACCTGAATATTGACAGCAATTGGTATCCTGATTCGGGAGCTACAAATCATTTAACTCATAGCTTGAGCAACCTATCTACTGGATCTGAGTACGGGGGAGGAAATCAAATATATGCAGCAAATGGGTCAGGTCTGCCAATCACTCATTATGGTTCCATGTCATTTAACTCCTCTACATTACCATTTAAATCGTTTACACTCAATAACTTACTTCATGTTCCATCTATTACCAAAAACTTAATCAGTGTTTCACAATTTGCCAAAGATAATCATGTTTTCTTTGAATTTTACCCCACTTTATGTTATGTGAAGGATCTGGATACTGGCCAAGTACTTCTTCAAGGACTACTTAATGATGGGCTCTACAAATTTACCATTCAACCATCACATAAAAGACTTCACCATTCTGACTCAAACACCAAGTCCGTTTTCAATACCGTCGTACCTGAATCTAATACTCCCTTACTTGATCTATGGCATAGAAGACTAGGTCATCCCCATTTACCTACTGTTAAAGCTGTTTTGAAACACATTGACTATTCTTCTAGCACTATAAATAAAATGAACTTTTGTGAACCATGTGCATTTGGTAAACATCATGCCCTTCCTTTCTCTCACTTCCTTACTCTTTATACACATCCTTTACAACTTATCACTTGTGATTTATGGGGTCCTGCTGTAAATGTATCTCATAATGGCTTTAGATATTACATAAGTTTTTTTGATACCTATAGTAGATACACCTGGATATATTTCTTACATTCCAAGTCTGATGCCTTTTTAGCTTTTCAAAAATTCAAAACCTGTGTTGAAAAGTCTCTTGGTCAATCAATTAAAAGTCTTCAAACTAATGGTGATACTGAATTTAAACCATTCAAACCTTTTCTTGATCAACATGGCATTGAACATAGGATAACATGTCCTTACACTTCAAAGCAGAATGACATAGTTAAGAGAAAACATAGGCATATCATGGAAATGGGTCTTACATTGCTATCTCAAGCCACTTTACCTCTATCATTCTGGGATGAAGCCTTCTTCACTAGTGTCTATCTCATAAATCTTTTGCCTACCCCAGTTCTTGATAATATAAGCCCGTTGGAGAAGCTACTTTGCCGGAAACCTAACTTTCCTTTTCTTAGAGTTTTTGGCTGCAAGTGTTATCCCTACTTTCGACCCTACCAATCACATAAACTATCTCTCCGATCCACACCATGTACTTTCCTAGGATACAGTACCTCCCATAAAGGGTACAAATGTCTAGCTTCAGATGGGCGTCTTTTCATTTCTAGACATGTATTGTTTGATGAAAATTCATTTCCATATGCATCATTTGCATCTCATTCTAGCATACCCAAATCCAAAAATGTTCTATCCCCACCACTTCACTCAATAATTCCATCATCTCTTATGAACCATAATGAGGATAGGCGACACACTGACACAGTTTCTGATAACACTGATTATCTAAACTCTACTATTGTGTATCCTTTAGAGACAGGTACTCAAGAGAGCTCTAGGGATGATGGTAACAGTGGAGGTATTACTCAATCTCCAAGTCCTATGGAACCTCCGCATCAAACTGATTCTGGTATGAATACTCAACTTCAATCTACCTCTATTCATCCCATGATAACACAGAGTAAGCATGATATTTTTAAACCAAAAGCATTCTTGATTGATTATACTCAAACTGAAACTTGCAATGCCAAGGAAGCTTTTAACCATCCTCATTGGAAAAAGGCCATGGAAGAAGAGTTTGAAGCCTTACAAAAAAATGGCACTTGGAGCCTTATTCCACAAAATCCTAATCAGAAAATTGTTGGTTGCAAATAGGTTTTTAAGATAAAAAGGAATTCAGATGGGTCTATTAGTAGATATAAAGCACGCTTAGTTGCTAAAGGGTTTCATCAAACACCTAATATTGATTACAATGAAACATTTAGCCCTGTTGTGAAACCCATTACTATTCGCATGCTCTTAACTATAACAATTATGAAAGGATGGAGTATACGTCAATTAGATGTTAATAATGCTTTTCTTCATGGCAATTTAGATGAAAATGTTTACATGGAACAACCATTTGGTTTTGAAGTTAAAAGTTCTTATCCTGTGGTTTGTCGTTTGAAAAAGGCTCTTTATGGTCTTAAACAAGCCCCTCGAGCATGGTATGAAAAGTTGAGCTAA

mRNA sequence

ATGATTCAACTTTCTATCATTTCTTCCCCATTTAGAGCACTAGTGTTGAGAACTAACGAATCATCTTCACCATTAATCAAATTTTGGATGACAAAGCAACCAAATATCGTCAAGGAAGCCACCAGCGATGATAATTTTTTCTTATGGAAGTTCCAAATTCTTACAGCATTAGAAGCTTATGATCTGGAAAATTTTCTTGAATCTGAATCAGAACCACCATCAAAATATCTCATATCCACTGGGAGTTCATCAGCATCTGCTACTAGAACACCAAATCCGACATATAAGGTATGGAAACGCCAAGATCGCCTTATCTCCTCATGGCTTCTAGGGTCTATGAGTGAAGAAATATTGAATCAGATGCTTCATTGCAAATCTGCAAAAGAAATTTGGGGAACTCTTCAAGGTATTTTCTCTTCCCGTTACTTGGCACAAGCTATGAAATTCAAAAACAAACTTCACAATATAAAGAAAGAATCCATGCCATTAAAAGAATACTTTCTCAAAATACAACATCGTGTTGATGCCTTAGCTTCAATTAACAAACCAGTTTCATCTGATGATCATATTCTGTACATATTGGCTGGTTTAGGATCTGATTATCAATCCATGATATCTGTTATTTTCCCCAGAACTGAATCTCCTTCTAAATCTCAAAATGAGAGCAAATTAATCAGCGAAAATGCTCTACCTTATGTTAATATTGTCACCCAAACAACTGAAAAAGGAGCAGAATCTTACATAAGGACCAACGAAAACAACTATCACAACAATCATTTCTACAATCAAAGGGGTGGCCGTGGCAATGGAAGATCAAACAGGGGAGGAAGAGGAAATCGTAATAAACCACAATGCCAAATCTGTACAAATTTTGGACATAGTGCTGATCGCTGCTTCTTTCGATATACTACAAGATCAAATTCATCAGGTTACTCACCGAACTCACATAATACTTCATATACTAATATGAATAATCATCCACAGATGTCTGCTATGGTGGCTACCCCCGACCTGAATATTGACAGCAATTGGTATCCTGATTCGGGAGCTACAAATCATTTAACTCATAGCTTGAGCAACCTATCTACTGGATCTGAGTACGGGGGAGGAAATCAAATATATGCAGCAAATGGGTCAGCTGTTTTGAAACACATTGACTATTCTTCTAGCACTATAAATAAAATGAACTTTTGTGAACCATGTGCATTTGGTAAACATCATGCCCTTCCTTTCTCTCACTTCCTTACTCTTTATACACATCCTTTACAACTTATCACTTGTGATTTATGGGGTCCTGCTGTAAATGTATCTCATAATGGCTTTAGATATTACATAAGTTTTTTTGATACCTATAGTAGATACACCTGGATATATTTCTTACATTCCAAGTCTGATGCCTTTTTAGCTTTTCAAAAATTCAAAACCTGTGTTGAAAAGTCTCTTGGTCAATCAATTAAAAGTCTTCAAACTAATGGTGATACTGAATTTAAACCATTCAAACCTTTTCTTGATCAACATGGCATTGAACATAGGATAACATGTCCTTACACTTCAAAGCAGAATGACATAGTTAAGAGAAAACATAGGCATATCATGGAAATGGGTCTTACATTGCTATCTCAAGCCACTTTACCTCTATCATTCTGGGATGAAGCCTTCTTCACTAGTGTCTATCTCATAAATCTTTTGCCTACCCCAGTTCTTGATAATATAAGCCCGTTGGAGAAGCTACTTTGCCGGAAACCTAACTTTCCTTTTCTTAGAGTTTTTGGCTGCAAGTGTTATCCCTACTTTCGACCCTACCAATCACATAAACTATCTCTCCGATCCACACCATGTACTTTCCTAGGATACAGTACCTCCCATAAAGGGTACAAATGTCTAGCTTCAGATGGGCGTCTTTTCATTTCTAGACATGTATTGTTTGATGAAAATTCATTTCCATATGCATCATTTGCATCTCATTCTAGCATACCCAAATCCAAAAATGTTCTATCCCCACCACTTCACTCAATAATTCCATCATCTCTTATGAACCATAATGAGGATAGGCGACACACTGACACAGTTTCTGATAACACTGATTATCTAAACTCTACTATTGTGTATCCTTTAGAGACAGGTACTCAAGAGAGCTCTAGGGATGATGGTAACAGTGGAGGTATTACTCAATCTCCAAGTCCTATGGAACCTCCGCATCAAACTGATTCTGGTATGAATACTCAACTTCAATCTACCTCTATTCATCCCATGATAACACAGAGTAAGCATGATATTTTTAAACCAAAAGCATTCTTGATTGATTATACTCAAACTGAAACTTGCAATGCCAAGGAAGCTTTTAACCATCCTCATTGGAAAAAGGCCATGGAAGAAGAGTTTGAAGCCTTACAAAAAAATGGCACTTGGAGCCTTATTCCACAAAATCCTAATCAGAAAATTGTTGATGGGTCTATTAGTAGATATAAAGCACGCTTAGTTGCTAAAGGGTTTCATCAAACACCTAATATTGATTACAATGAAACATTTAGCCCTGTTGTGAAACCCATTACTATTCGCATGCTCTTAACTATAACAATTATGAAAGGATGGAGTATACGTCAATTAGATGTTAATAATGCTTTTCTTCATGGCAATTTAGATGAAAATGTTTACATGGAACAACCATTTGGTTTTGAAGTTAAAAGTTCTTATCCTGTGGTTTGTCGTTTGAAAAAGGCTCTTTATGGTCTTAAACAAGCCCCTCGAGCATGGTATGAAAAGTTGAGCTAA

Coding sequence (CDS)

ATGATTCAACTTTCTATCATTTCTTCCCCATTTAGAGCACTAGTGTTGAGAACTAACGAATCATCTTCACCATTAATCAAATTTTGGATGACAAAGCAACCAAATATCGTCAAGGAAGCCACCAGCGATGATAATTTTTTCTTATGGAAGTTCCAAATTCTTACAGCATTAGAAGCTTATGATCTGGAAAATTTTCTTGAATCTGAATCAGAACCACCATCAAAATATCTCATATCCACTGGGAGTTCATCAGCATCTGCTACTAGAACACCAAATCCGACATATAAGGTATGGAAACGCCAAGATCGCCTTATCTCCTCATGGCTTCTAGGGTCTATGAGTGAAGAAATATTGAATCAGATGCTTCATTGCAAATCTGCAAAAGAAATTTGGGGAACTCTTCAAGGTATTTTCTCTTCCCGTTACTTGGCACAAGCTATGAAATTCAAAAACAAACTTCACAATATAAAGAAAGAATCCATGCCATTAAAAGAATACTTTCTCAAAATACAACATCGTGTTGATGCCTTAGCTTCAATTAACAAACCAGTTTCATCTGATGATCATATTCTGTACATATTGGCTGGTTTAGGATCTGATTATCAATCCATGATATCTGTTATTTTCCCCAGAACTGAATCTCCTTCTAAATCTCAAAATGAGAGCAAATTAATCAGCGAAAATGCTCTACCTTATGTTAATATTGTCACCCAAACAACTGAAAAAGGAGCAGAATCTTACATAAGGACCAACGAAAACAACTATCACAACAATCATTTCTACAATCAAAGGGGTGGCCGTGGCAATGGAAGATCAAACAGGGGAGGAAGAGGAAATCGTAATAAACCACAATGCCAAATCTGTACAAATTTTGGACATAGTGCTGATCGCTGCTTCTTTCGATATACTACAAGATCAAATTCATCAGGTTACTCACCGAACTCACATAATACTTCATATACTAATATGAATAATCATCCACAGATGTCTGCTATGGTGGCTACCCCCGACCTGAATATTGACAGCAATTGGTATCCTGATTCGGGAGCTACAAATCATTTAACTCATAGCTTGAGCAACCTATCTACTGGATCTGAGTACGGGGGAGGAAATCAAATATATGCAGCAAATGGGTCAGCTGTTTTGAAACACATTGACTATTCTTCTAGCACTATAAATAAAATGAACTTTTGTGAACCATGTGCATTTGGTAAACATCATGCCCTTCCTTTCTCTCACTTCCTTACTCTTTATACACATCCTTTACAACTTATCACTTGTGATTTATGGGGTCCTGCTGTAAATGTATCTCATAATGGCTTTAGATATTACATAAGTTTTTTTGATACCTATAGTAGATACACCTGGATATATTTCTTACATTCCAAGTCTGATGCCTTTTTAGCTTTTCAAAAATTCAAAACCTGTGTTGAAAAGTCTCTTGGTCAATCAATTAAAAGTCTTCAAACTAATGGTGATACTGAATTTAAACCATTCAAACCTTTTCTTGATCAACATGGCATTGAACATAGGATAACATGTCCTTACACTTCAAAGCAGAATGACATAGTTAAGAGAAAACATAGGCATATCATGGAAATGGGTCTTACATTGCTATCTCAAGCCACTTTACCTCTATCATTCTGGGATGAAGCCTTCTTCACTAGTGTCTATCTCATAAATCTTTTGCCTACCCCAGTTCTTGATAATATAAGCCCGTTGGAGAAGCTACTTTGCCGGAAACCTAACTTTCCTTTTCTTAGAGTTTTTGGCTGCAAGTGTTATCCCTACTTTCGACCCTACCAATCACATAAACTATCTCTCCGATCCACACCATGTACTTTCCTAGGATACAGTACCTCCCATAAAGGGTACAAATGTCTAGCTTCAGATGGGCGTCTTTTCATTTCTAGACATGTATTGTTTGATGAAAATTCATTTCCATATGCATCATTTGCATCTCATTCTAGCATACCCAAATCCAAAAATGTTCTATCCCCACCACTTCACTCAATAATTCCATCATCTCTTATGAACCATAATGAGGATAGGCGACACACTGACACAGTTTCTGATAACACTGATTATCTAAACTCTACTATTGTGTATCCTTTAGAGACAGGTACTCAAGAGAGCTCTAGGGATGATGGTAACAGTGGAGGTATTACTCAATCTCCAAGTCCTATGGAACCTCCGCATCAAACTGATTCTGGTATGAATACTCAACTTCAATCTACCTCTATTCATCCCATGATAACACAGAGTAAGCATGATATTTTTAAACCAAAAGCATTCTTGATTGATTATACTCAAACTGAAACTTGCAATGCCAAGGAAGCTTTTAACCATCCTCATTGGAAAAAGGCCATGGAAGAAGAGTTTGAAGCCTTACAAAAAAATGGCACTTGGAGCCTTATTCCACAAAATCCTAATCAGAAAATTGTTGATGGGTCTATTAGTAGATATAAAGCACGCTTAGTTGCTAAAGGGTTTCATCAAACACCTAATATTGATTACAATGAAACATTTAGCCCTGTTGTGAAACCCATTACTATTCGCATGCTCTTAACTATAACAATTATGAAAGGATGGAGTATACGTCAATTAGATGTTAATAATGCTTTTCTTCATGGCAATTTAGATGAAAATGTTTACATGGAACAACCATTTGGTTTTGAAGTTAAAAGTTCTTATCCTGTGGTTTGTCGTTTGAAAAAGGCTCTTTATGGTCTTAAACAAGCCCCTCGAGCATGGTATGAAAAGTTGAGCTAA

Protein sequence

MIQLSIISSPFRALVLRTNESSSPLIKFWMTKQPNIVKEATSDDNFFLWKFQILTALEAYDLENFLESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMPLKEYFLKIQHRVDALASINKPVSSDDHILYILAGLGSDYQSMISVIFPRTESPSKSQNESKLISENALPYVNIVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNGRSNRGGRGNRNKPQCQICTNFGHSADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHPQMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSAVLKHIDYSSSTINKMNFCEPCAFGKHHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYTWIYFLHSKSDAFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVKRKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQTETCNAKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIVDGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPITIRMLLTITIMKGWSIRQLDVNNAFLHGNLDENVYMEQPFGFEVKSSYPVVCRLKKALYGLKQAPRAWYEKLS
Homology
[Close]
BLAST of Pay0003774 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.9e-123
Identity = 336/1106 (30.38%), Postives = 497/1106 (44.94%), Query Frame = 0 

Query: 45   NFFLWKFQILTALEAYDLENFLE-SESEPPSKYLISTGSSSASATRTPNPTYKVWKRQDR 104
            N+ +W  Q+    + Y+L  FL+ S + PP+    + G+ +A      NP Y  WKRQD+
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPA----TIGTDAAPRV---NPDYTRWKRQDK 89

Query: 105  LISSWLLGSMSEEILNQMLHCKSAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMPL 164
            LI S +LG++S  +   +    +A +IW TL+ I+++       + + +L    K +  +
Sbjct: 90   LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTI 149

Query: 165  KEYFLKIQHRVDALASINKPVSSDDHILYILAGLGSDYQSMISVIFPRTESPSKSQ---- 224
             +Y   +  R D LA + KP+  D+ +  +L  L  +Y+ +I  I  +   P+ ++    
Sbjct: 150  DDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHER 209

Query: 225  ---NESKLISENALPYVNIVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNGR----- 284
               +ESK+++ ++   + I T        +    N NN + N+ Y+ R    N +     
Sbjct: 210  LLNHESKILAVSSATVIPI-TANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQS 269

Query: 285  -SNRGGRGNRNKP---QCQICTNFGHSADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHP 344
             +N     N++KP   +CQIC   GHSA RC       S+ +   P S  T +      P
Sbjct: 270  STNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPW-----QP 329

Query: 345  QMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSAV-LKHI- 404
            + +  + +P     +NW  DSGAT+H+T   +NLS    Y GG+ +  A+GS + + H  
Sbjct: 330  RANLALGSP--YSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 389

Query: 405  ------------------------------------------------------------ 464
                                                                        
Sbjct: 390  STSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQ 449

Query: 465  --------------------------------------------------DYSSSTIN-- 524
                                                              +YS S +N  
Sbjct: 450  GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS 509

Query: 525  -KMNFCEPCAFGKHHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYS 584
             K   C  C   K + +PFS      T PL+ I  D+W   + +SH+ +RYY+ F D ++
Sbjct: 510  HKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPI-LSHDNYRYYVIFVDHFT 569

Query: 585  RYTWIYFLHSKSDAFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRI 644
            RYTW+Y L  KS     F  FK  +E      I +  ++   EF     +  QHGI H  
Sbjct: 570  RYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLT 629

Query: 645  TCPYTSKQNDIVKRKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNIS 704
            + P+T + N + +RKHRHI+E GLTLLS A++P ++W  AF  +VYLIN LPTP+L   S
Sbjct: 630  SPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLES 689

Query: 705  PLEKLLCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL-ASD 764
            P +KL    PN+  LRVFGC CYP+ RPY  HKL  +S  C FLGYS +   Y CL    
Sbjct: 690  PFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQT 749

Query: 765  GRLFISRHVLFDENSFPYASF------------------ASHSSIPKSKNVL-----SPP 824
             RL+ISRHV FDEN FP++++                  + H+++P    VL     S P
Sbjct: 750  SRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDP 809

Query: 825  LHSIIPSSLMNHNEDRRHTDTVSDNTDYLNST------------------IVYPLETGTQ 884
             H+  P S  + +   R++   S N D   S+                     P +T TQ
Sbjct: 810  HHAATPPS--SPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQ 869

Query: 885  -ESSRDDGNSGGITQSPS----PMEPPHQTDSGMNTQLQSTS------------IHP--- 923
              SS++   +    +SPS     +  P Q+ S   +   S S            IHP   
Sbjct: 870  THSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPP 929

[Close]
BLAST of Pay0003774 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.8e-118
Identity = 331/1106 (29.93%), Postives = 482/1106 (43.58%), Query Frame = 0 

Query: 45   NFFLWKFQILTALEAYDLENFLESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQDRL 104
            N+ +W  Q+    + Y+L  FL+  +  P        +    A    NP Y  W+RQD+L
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMP------PATIGTDAVPRVNPDYTRWRRQDKL 89

Query: 105  ISSWLLGSMSEEILNQMLHCKSAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMPLK 164
            I S +LG++S  +   +    +A +IW TL+ I+++       +                
Sbjct: 90   IYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQ---------------- 149

Query: 165  EYFLKIQHRVDALASINKPVSSDDHILYILAGLGSDYQSMISVIFPRTESPSKSQ----- 224
               L+   R D LA + KP+  D+ +  +L  L  DY+ +I  I  +   PS ++     
Sbjct: 150  ---LRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERL 209

Query: 225  --NESKLISENALPYVNIVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNG--RSNRG 284
               ESKL++ N+   V I T        +    N+NN  +N  YN    R N    S+ G
Sbjct: 210  INRESKLLALNSAEVVPI-TANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSG 269

Query: 285  GRGNRNKP-----QCQICTNFGHSADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHPQMS 344
             R +  +P     +CQIC+  GHSA RC   +  +S ++     S  T +      P+ +
Sbjct: 270  SRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPW-----QPRAN 329

Query: 345  AMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGS----------- 404
              V +P     +NW  DSGAT+H+T   +NLS    Y GG+ +  A+GS           
Sbjct: 330  LAVNSP--YNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 389

Query: 405  ------------------------------------------------------------ 464
                                                                        
Sbjct: 390  LPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKT 449

Query: 465  ---------------------------------------AVLKHI--DYSSSTIN---KM 524
                                                   A+L  +  ++S   +N   K+
Sbjct: 450  KDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKL 509

Query: 525  NFCEPCAFGKHHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYT 584
              C  C   K H +PFS+     + PL+ I  D+W   + +S + +RYY+ F D ++RYT
Sbjct: 510  LSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPI-LSIDNYRYYVIFVDHFTRYT 569

Query: 585  WIYFLHSKSDAFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCP 644
            W+Y L  KS     F  FK+ VE      I +L ++   EF   + +L QHGI H  + P
Sbjct: 570  WLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPP 629

Query: 645  YTSKQNDIVKRKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLE 704
            +T + N + +RKHRHI+EMGLTLLS A++P ++W  AF  +VYLIN LPTP+L   SP +
Sbjct: 630  HTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQ 689

Query: 705  KLLCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRL 764
            KL  + PN+  L+VFGC CYP+ RPY  HKL  +S  C F+GYS +   Y CL    GRL
Sbjct: 690  KLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRL 749

Query: 765  FISRHVLFDENSFPYA------------------SFASHSSIPKSKNVLSPP-------- 824
            + SRHV FDE  FP++                  ++ SH+++P +  VL  P        
Sbjct: 750  YTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLD 809

Query: 825  -----------------LHSIIPSS----------------------------------- 884
                               S +PSS                                   
Sbjct: 810  TSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSP 869

Query: 885  -LMNHNEDRRHTDTVSDNTDYLNSTIVYP-LETGTQESSRDDGNSGGITQSPSPMEPPHQ 923
             L N N +    ++ + N+    S I  P + T +   S  +  S   T +P P+ P   
Sbjct: 870  ILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTP-PLPPVLP 929

[Close]
BLAST of Pay0003774 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.4e-72
Identity = 270/1023 (26.39%), Postives = 416/1023 (40.66%), Query Frame = 0 

Query: 37  VKEATSDDNFFLWKFQILTALEAYDLENFLESESEPPSKYLISTGSSSASATRTPNPTYK 96
           V +   D+ F  W+ ++   L    L   L+ +S+ P                    T K
Sbjct: 8   VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPD-------------------TMK 67

Query: 97  V--WKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWGTLQGIFSSRYLAQAMKFKNKLH 156
              W   D   +S +   +S++++N ++   +A+ IW  L+ ++ S+ L   +  K +L+
Sbjct: 68  AEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLY 127

Query: 157 NI-KKESMPLKEYFLKIQHRVDALASINKPVSSDDHILYILAGLGSDYQSM-ISVIFPRT 216
            +   E      +       +  LA++   +  +D  + +L  L S Y ++  +++  +T
Sbjct: 128 ALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKT 187

Query: 217 ESPSKSQNESKLISE--NALPYVNIVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNG 276
               K    + L++E     P        TE    SY R++ N       Y + G RG  
Sbjct: 188 TIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNN-------YGRSGARGKS 247

Query: 277 RSNRGGRGNRNKPQCQICTNFGHSADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHPQMS 336
           + NR     RN   C  C   GH    C      +  +SG   + +  +    N++  + 
Sbjct: 248 K-NRSKSRVRN---CYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLF 307

Query: 337 AMVATPDLNI---DSNWYPDSGATNHLTH----------------SLSNLSTGSEYG--- 396
                  +++   +S W  D+ A++H T                  + N S     G   
Sbjct: 308 INEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGD 367

Query: 397 ----------------------------------GGNQIYAAN-------GSAVLKH--- 456
                                              G + Y AN       GS V+     
Sbjct: 368 ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVA 427

Query: 457 ------------------------------------------------IDYSSSTINKMN 516
                                                           I Y+  T  K  
Sbjct: 428 RGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP- 487

Query: 517 FCEPCAFGKHHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYTW 576
            C+ C FGK H + F        + L L+  D+ GP    S  G +Y+++F D  SR  W
Sbjct: 488 -CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLW 547

Query: 577 IYFLHSKSDAFLAFQKFKTCVEKSLGQSIKSLQTNGDTEF--KPFKPFLDQHGIEHRITC 636
           +Y L +K   F  FQKF   VE+  G+ +K L+++   E+  + F+ +   HGI H  T 
Sbjct: 548 VYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTV 607

Query: 637 PYTSKQNDIVKRKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPL 696
           P T + N + +R +R I+E   ++L  A LP SFW EA  T+ YLIN  P+  L    P 
Sbjct: 608 PGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPE 667

Query: 697 EKLLCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRL 756
                ++ ++  L+VFGC+ + +    Q  KL  +S PC F+GY     GY+      + 
Sbjct: 668 RVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKK 727

Query: 757 FI-SRHVLFDENSFPYASFASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDN 816
            I SR V+F E+    A+  S     K KN + P   + IPS+  N       TD VS+ 
Sbjct: 728 VIRSRDVVFRESEVRTAADMSE----KVKNGIIPNFVT-IPSTSNNPTSAESTTDEVSEQ 787

Query: 817 TDYLNSTIVYPLETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMIT 876
            +        P E   Q    D+G            E  H T      Q    S  P + 
Sbjct: 788 GE-------QPGEVIEQGEQLDEGVE----------EVEHPTQGEEQHQPLRRSERPRVE 847

Query: 877 QSKHDIFKPKAFLIDYTQTETCNAKEAFNHP---HWKKAMEEEFEALQKNGTWSLI--PQ 922
             +   +    +++     E  + KE  +HP      KAM+EE E+LQKNGT+ L+  P+
Sbjct: 848 SRR---YPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPK 907

[Close]
BLAST of Pay0003774 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 207.2 bits (526), Expect = 7.8e-52
Identity = 173/605 (28.60%), Postives = 265/605 (43.80%), Query Frame = 0 

Query: 398  CEPCAFGKHHALPFSHF--LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYT 457
            CEPC  GK   LPF      T    PL ++  D+ GP   V+ +   Y++ F D ++ Y 
Sbjct: 455  CEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYC 514

Query: 458  WIYFLHSKSDAFLAFQKFKTCVEKSLGQSIKSLQTNGDTEF--KPFKPFLDQHGIEHRIT 517
              Y +  KSD F  FQ F    E      +  L  +   E+     + F  + GI + +T
Sbjct: 515  VTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLT 574

Query: 518  CPYTSKQNDIVKRKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNIS- 577
             P+T + N + +R  R I E   T++S A L  SFW EA  T+ YLIN +P+  L + S 
Sbjct: 575  VPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSK 634

Query: 578  -PLEKLLCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL-AS 637
             P E    +KP    LRVFG   Y + +  Q  K   +S    F+GY  +  G+K   A 
Sbjct: 635  TPYEMWHNKKPYLKHLRVFGATVYVHIKNKQG-KFDDKSFKSIFVGYEPN--GFKLWDAV 694

Query: 638  DGRLFISRHVLFDENSFPYAS-------FASHSSIPKSKNVLSPPLHSIIPSSLMNHNED 697
            + +  ++R V+ DE +   +        F   S   ++KN  +     II +   N +++
Sbjct: 695  NEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDS-RKIIQTEFPNESKE 754

Query: 698  RRHTDTVSDNTDYLNSTI----------VYPLET---------------------GTQES 757
              +   + D+ +  N              +P E+                      +++ 
Sbjct: 755  CDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKR 814

Query: 758  SRDD-----GNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLI 817
             RDD       SG   +S       H  + G++   ++  I  +  +S+    KP+   I
Sbjct: 815  KRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQ---I 874

Query: 818  DYTQTE------TCNAKEAFN--------------HPHWKKAMEEEFEALQKNGTWSLIP 877
             Y + +        NA   FN                 W++A+  E  A + N TW++  
Sbjct: 875  SYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITK 934

Query: 878  QNPNQKIVD------------GSISRYKARLVAKGFHQTPNIDYNETFSPVVKPITIRML 921
            +  N+ IVD            G+  RYKARLVA+GF Q   IDY ETF+PV +  + R +
Sbjct: 935  RPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFI 994

[Close]
BLAST of Pay0003774 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.7e-15
Identity = 54/129 (41.86%), Postives = 71/129 (55.04%), Query Frame = 0 

Query: 751 MITQSKHDIFK--PKAFLIDYTQTETCNAKE-------AFNHPHWKKAMEEEFEALQKNG 810
           M+T+SK  I K  PK     Y+ T T   K+       A   P W +AM+EE +AL +N 
Sbjct: 1   MLTRSKAGINKLNPK-----YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNK 60

Query: 811 TWSLIPQNPNQKIV------------DGSISRYKARLVAKGFHQTPNIDYNETFSPVVKP 859
           TW L+P   NQ I+            DG++ R KARLVAKGFHQ   I + ET+SPVV+ 
Sbjct: 61  TWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRT 120

[Close]
BLAST of Pay0003774 vs. ExPASy TrEMBL
Match: A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)

HSP 1 Score: 1264.2 bits (3270), Expect = 0.0e+00
Identity = 672/891 (75.42%), Postives = 693/891 (77.78%), Query Frame = 0 

Query: 7   ISSPFRALVLRTNESSSPLIK-FWMTKQPNIVKEATSDDNFFLWKFQILTALEAYDLENF 66
           +SS    L +   E+SSP+ + F    + ++VK   +DD F LWKFQILTALEAYDLENF
Sbjct: 1   MSSTSSLLGVENTEASSPINQIFGSGNKISLVK--LNDDTFLLWKFQILTALEAYDLENF 60

Query: 67  LESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 126
           LESESEPPSKYLIST SSSASAT TPNP YKVWKRQDRLISSWLLGSMSEEILNQMLHCK
Sbjct: 61  LESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 120

Query: 127 SAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMPLKEYFLKIQHRVDALASINKPVS 186
           SAKEIW TLQGIFSSRYLAQAM+FKNKLHNIKK SMPLKEYFLKI   VDALASINKPVS
Sbjct: 121 SAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVS 180

Query: 187 SDDHILYILAGLGSDYQSMISVIFPRTESPS-----------KSQNESKLISENALPYVN 246
           SDDHILYILAGLGSDYQSMISVI  RT+SPS           +SQNESKLISE ALP VN
Sbjct: 181 SDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVN 240

Query: 247 IVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNGRSNRGGRGNRNKPQCQICTNFGHS 306
           IVTQTTEKGAESYIRTN+NNYHNNH YNQRGGRGNGRSNRG RGNRNKPQCQIC   G+S
Sbjct: 241 IVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYS 300

Query: 307 ADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHPQMSAMVATPDLNIDSNWYPDSGATNHL 366
           ADRCFFRYT RSNSSGYSPNSHNTSYTNMNNHPQMSAMVA  DLNIDSNWYPDSGATNHL
Sbjct: 301 ADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHL 360

Query: 367 THSLSNLSTGSEYGGGNQIYAANGS----------------------------------- 426
           THSLSNLS GSEYGGGNQIYAANGS                                   
Sbjct: 361 THSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITK 420

Query: 427 ------------------------------------------------------------ 486
                                                                       
Sbjct: 421 NLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNS 480

Query: 487 ----------------------------------AVLKHIDYSSSTINKMNFCEPCAFGK 546
                                             AVL HID SS TINK+NFCE CA GK
Sbjct: 481 NTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGK 540

Query: 547 HHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYTWIYFLHSKSD 606
           HHALPFSH LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISF D YSRYTWIYFL+SKSD
Sbjct: 541 HHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSD 600

Query: 607 AFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVK 666
           AFLAFQKFKTCVEKSLGQSIKSLQT+G TEFKPFKPFLDQHGIEHRITCPYTSKQNDIV+
Sbjct: 601 AFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVE 660

Query: 667 RKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFP 726
           RKHR+IMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPTPVLDNISPLEKL CRKPNFP
Sbjct: 661 RKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFP 720

Query: 727 FLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 757
            LRVFGCKCYPY RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN
Sbjct: 721 SLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 780

[Close]
BLAST of Pay0003774 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)

HSP 1 Score: 1262.3 bits (3265), Expect = 0.0e+00
Identity = 671/891 (75.31%), Postives = 692/891 (77.67%), Query Frame = 0 

Query: 7   ISSPFRALVLRTNESSSPLIK-FWMTKQPNIVKEATSDDNFFLWKFQILTALEAYDLENF 66
           +SS    L +   E+SSP+ + F    + ++VK   +DD F LWKFQILTALEAYDLENF
Sbjct: 1   MSSTSSLLGVENTEASSPINQIFGSGNKISLVK--LNDDTFLLWKFQILTALEAYDLENF 60

Query: 67  LESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 126
           LESESEPPSKYLIST SSSASAT TPNP YKVWKRQDRLISSWLLGSMSEEILNQMLHCK
Sbjct: 61  LESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 120

Query: 127 SAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMPLKEYFLKIQHRVDALASINKPVS 186
           SAKEIW TLQGIFSSRYLAQAM+FKNKLHNIKK SMPLKEYFLKI   VDALASINKPVS
Sbjct: 121 SAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVS 180

Query: 187 SDDHILYILAGLGSDYQSMISVIFPRTESPS-----------KSQNESKLISENALPYVN 246
           SDDHILYILAGLGSDYQSMISVI  RT+SPS           +SQNESKLISE ALP VN
Sbjct: 181 SDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVN 240

Query: 247 IVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNGRSNRGGRGNRNKPQCQICTNFGHS 306
           IVTQTTEKGAESYIRTN+NNYHNNH YNQRGGRGNGRSNRG RGNRNKPQCQIC   G+S
Sbjct: 241 IVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYS 300

Query: 307 ADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHPQMSAMVATPDLNIDSNWYPDSGATNHL 366
           ADRCFFRYT RSNSSGYSPNSHNTSYTNMNNHPQMSAMVA  DLNIDSNWYPDSGATNHL
Sbjct: 301 ADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHL 360

Query: 367 THSLSNLSTGSEYGGGNQIYAANGS----------------------------------- 426
           THSLSNLS GSEYGGGNQIYAANGS                                   
Sbjct: 361 THSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITK 420

Query: 427 ------------------------------------------------------------ 486
                                                                       
Sbjct: 421 NLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNS 480

Query: 487 ----------------------------------AVLKHIDYSSSTINKMNFCEPCAFGK 546
                                             AVL HID SS TINK+NFCE CA GK
Sbjct: 481 NTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGK 540

Query: 547 HHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYTWIYFLHSKSD 606
           HHALPFSH LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISF D YSRYTWIYFL+SKSD
Sbjct: 541 HHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSD 600

Query: 607 AFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVK 666
           AFLAFQKFKTCVEKSLGQSIKSLQT+G TEFKPFKPFLDQHGIEHRITCPYTSKQNDIV+
Sbjct: 601 AFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVE 660

Query: 667 RKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFP 726
           RKHR+IMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPTPVLDNISPLEKL CRKPNFP
Sbjct: 661 RKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFP 720

Query: 727 FLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 757
            LRVFGCKCYPY RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN
Sbjct: 721 SLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 780

[Close]
BLAST of Pay0003774 vs. ExPASy TrEMBL
Match: A0A5A7VFQ6 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00150 PE=4 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 7.2e-226
Identity = 414/519 (79.77%), Postives = 426/519 (82.08%), Query Frame = 0 

Query: 328 QMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSAVLKHIDY 387
           QMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGS  L    Y
Sbjct: 41  QMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSG-LPITHY 100

Query: 388 SSSTINKMNFCEPCAFGKHHALPFSHF-LTLYTHPLQ--------LITCDLWGPAVNVSH 447
            S + N               LPF  F L    H L         L+   L+   +  SH
Sbjct: 101 GSMSFNS------------STLPFKSFTLNNLLHDLDTGQVLLQGLLNDGLYKFTIQPSH 160

Query: 448 NGFRY----YISFFDT------------------YSRYTWIYFLHSKSDAFLAFQKFKTC 507
               +      S F+T                  +     +  + +  D   AFQKFKTC
Sbjct: 161 KRLHHSDSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPTVKAVLNHIDHSSAFQKFKTC 220

Query: 508 VEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVKRKHRHIMEMGL 567
           VEKSLGQSIKSLQT+G TEFKPFKPFLDQHGIEHRITCPYTSKQNDIV+RKHRHIMEMGL
Sbjct: 221 VEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRHIMEMGL 280

Query: 568 TLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFPFLRVFGCKCYP 627
           TLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKL CRKPNFPFLRVFGCKCYP
Sbjct: 281 TLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLFCRKPNFPFLRVFGCKCYP 340

Query: 628 YFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHS 687
           YFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHS
Sbjct: 341 YFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHS 400

Query: 688 SIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDD 747
           SIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDD
Sbjct: 401 SIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDD 460

Query: 748 GNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQTETCN 807
           GNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQTETCN
Sbjct: 461 GNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQTETCN 520

Query: 808 AKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIV 816
           AKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIV
Sbjct: 521 AKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIV 546

[Close]
BLAST of Pay0003774 vs. ExPASy TrEMBL
Match: A0A5D3D5W0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001310 PE=4 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 6.4e-214
Identity = 373/395 (94.43%), Postives = 375/395 (94.94%), Query Frame = 0 

Query: 532 MEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFPFLRVFG 591
           MEMGLTLLSQATLPLSFWDEAF TSVYLINLLPTPVLDNISPLEK+  RKPNFPFLRVFG
Sbjct: 1   MEMGLTLLSQATLPLSFWDEAFSTSVYLINLLPTPVLDNISPLEKVFFRKPNFPFLRVFG 60

Query: 592 CKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS 651
           CKCYPY RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS
Sbjct: 61  CKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS 120

Query: 652 FASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQE 711
           FASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLN TIVYPLETGTQE
Sbjct: 121 FASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNPTIVYPLETGTQE 180

Query: 712 SSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQ 771
           SSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQ
Sbjct: 181 SSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQ 240

Query: 772 TETCNAKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIVD------------GSI 831
           TETCNAKEAFNHPHWKKAMEEEF+ALQKNGTWSLIPQNPNQKIV             GSI
Sbjct: 241 TETCNAKEAFNHPHWKKAMEEEFKALQKNGTWSLIPQNPNQKIVGCKWVFKIKRNSYGSI 300

Query: 832 SRYKARLVAKGFHQTPNIDYNETFSPVVKPITIRMLLTITIMKGWSIRQLDVNNAFLHGN 891
           SRYKARLVAKGFHQT NIDYNETFSPVVKPITIRMLLTITIMKGWSI QLDVNNAFLHGN
Sbjct: 301 SRYKARLVAKGFHQTHNIDYNETFSPVVKPITIRMLLTITIMKGWSIHQLDVNNAFLHGN 360

Query: 892 LDENVYMEQPFGFEVKSSYPVVCRLKKALYGLKQA 915
           LDENVYMEQPFGFEVKSSYPVVCRLKKALYGLKQA
Sbjct: 361 LDENVYMEQPFGFEVKSSYPVVCRLKKALYGLKQA 395

[Close]
BLAST of Pay0003774 vs. ExPASy TrEMBL
Match: A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 4.0e-184
Identity = 423/1106 (38.25%), Postives = 567/1106 (51.27%), Query Frame = 0 

Query: 43   DDNFFLWKFQILTALEAYDLENFLESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQD 102
            DDNF +WK+QI  A+  Y LE FL    + P K +     +       PNP ++ ++RQD
Sbjct: 156  DDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMV-----TDKIGVLVPNPKFRDYQRQD 215

Query: 103  RLISSWLLGSMSEEILNQMLHCKSAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMP 162
             L+ SWLL S+    L Q++ C SA E+W T+   F+S+  A+ M +K+++  +KK+ + 
Sbjct: 216  HLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLT 275

Query: 163  LKEYFLKIQHRVDALASINKPVSSDDHILYILAGLGSDYQSMISVIFPRTESPSKSQNES 222
            +++Y  K+++  D LA+    +S  DHIL I+ GLG +Y+S+I+VI  +  SPS     S
Sbjct: 276  MRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTS 335

Query: 223  KL----------ISENALPYVNIVTQTTEKGAESYIRTNENNYHNNHFY--NQRGG---- 282
             L          IS N L  VN  +Q + +G  S    N N Y ++ F   NQ GG    
Sbjct: 336  TLIAHEGRIAHKISSNDLS-VNYTSQYSNRGPSS--SWNSNGYPSSGFQNRNQFGGNQVT 395

Query: 283  RGNGRSNRG-GRGNRN---KPQCQICTNFGHSADRCFFRYT------------------- 342
            RG+   NRG GRG      KPQCQ+C  FGH+  RCF+RY                    
Sbjct: 396  RGSFVHNRGRGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGS 455

Query: 343  -TRSNSSGYSPNSHNTSYTNMN-----NHPQMSAMVATPDLNIDSNWYPDSGATNHLTHS 402
              R+ +SG   ++ N + T  +     ++ +M AMVATP+   +  W+PDSGATNH+TH 
Sbjct: 456  GARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHD 515

Query: 403  LSNLSTGSEYGGGNQIYAANGSAV-LKHIDY----SSSTINKMNF--------------- 462
            L NL++G+EY G ++I+  NG+ + + HI      SSS+ NK+ F               
Sbjct: 516  LGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLL 575

Query: 463  ------------------------------------------------------------ 522
                                                                        
Sbjct: 576  SVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSN 635

Query: 523  ------------------------------------------------------------ 582
                                                                        
Sbjct: 636  DKNELTCCNASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTK 695

Query: 583  -----CEPCAFGKHHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYS 642
                 C  C  GK H LPF    T+YT PLQL+  DLWGPA   S  GF YY+SF D YS
Sbjct: 696  SGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYS 755

Query: 643  RYTWIYFLHSKSDAFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRI 702
            RYTW+YFL +KS    AF  FK   E   G  +K+ QT+   EF+  K + +Q+GI HR+
Sbjct: 756  RYTWVYFLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRL 815

Query: 703  TCPYTSKQNDIVKRKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNIS 762
            +CP+TSKQN I++RKHRHI+E+GLTLL+QA+LPL +W +AF T+V+LIN LPT VL    
Sbjct: 816  SCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKC 875

Query: 763  PLEKLLCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDG 822
            P E L   KPN+  L+VFGC C+P+ RPY  HKL  RS+PCTFLGYS+ HKGYKCL   G
Sbjct: 876  PYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQG 935

Query: 823  RLFISRHVLFDENSFPYA-------SFASHSS-----IPKSKNV--------LSPPLHSI 882
            R+FISR V+FDE  FP+A          SHS+     IP  KN+        LS P  S 
Sbjct: 936  RMFISRSVVFDETRFPFADRLQKPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSA 995

Query: 883  IPSSLMNHN--EDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDDGNSGGITQSPSPME 923
              S  ++ N   D R       NTD  ++  +         SS      G I  S +  E
Sbjct: 996  QSSHQLDENLGSDIRSVQQDLSNTDSSSTVPILNESASIPSSSNLYALPGTIPLSTNSDE 1055

[Close]
BLAST of Pay0003774 vs. NCBI nr
Match: TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1264.2 bits (3270), Expect = 0.0e+00
Identity = 672/891 (75.42%), Postives = 693/891 (77.78%), Query Frame = 0 

Query: 7   ISSPFRALVLRTNESSSPLIK-FWMTKQPNIVKEATSDDNFFLWKFQILTALEAYDLENF 66
           +SS    L +   E+SSP+ + F    + ++VK   +DD F LWKFQILTALEAYDLENF
Sbjct: 1   MSSTSSLLGVENTEASSPINQIFGSGNKISLVK--LNDDTFLLWKFQILTALEAYDLENF 60

Query: 67  LESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 126
           LESESEPPSKYLIST SSSASAT TPNP YKVWKRQDRLISSWLLGSMSEEILNQMLHCK
Sbjct: 61  LESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 120

Query: 127 SAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMPLKEYFLKIQHRVDALASINKPVS 186
           SAKEIW TLQGIFSSRYLAQAM+FKNKLHNIKK SMPLKEYFLKI   VDALASINKPVS
Sbjct: 121 SAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVS 180

Query: 187 SDDHILYILAGLGSDYQSMISVIFPRTESPS-----------KSQNESKLISENALPYVN 246
           SDDHILYILAGLGSDYQSMISVI  RT+SPS           +SQNESKLISE ALP VN
Sbjct: 181 SDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVN 240

Query: 247 IVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNGRSNRGGRGNRNKPQCQICTNFGHS 306
           IVTQTTEKGAESYIRTN+NNYHNNH YNQRGGRGNGRSNRG RGNRNKPQCQIC   G+S
Sbjct: 241 IVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYS 300

Query: 307 ADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHPQMSAMVATPDLNIDSNWYPDSGATNHL 366
           ADRCFFRYT RSNSSGYSPNSHNTSYTNMNNHPQMSAMVA  DLNIDSNWYPDSGATNHL
Sbjct: 301 ADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHL 360

Query: 367 THSLSNLSTGSEYGGGNQIYAANGS----------------------------------- 426
           THSLSNLS GSEYGGGNQIYAANGS                                   
Sbjct: 361 THSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITK 420

Query: 427 ------------------------------------------------------------ 486
                                                                       
Sbjct: 421 NLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNS 480

Query: 487 ----------------------------------AVLKHIDYSSSTINKMNFCEPCAFGK 546
                                             AVL HID SS TINK+NFCE CA GK
Sbjct: 481 NTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGK 540

Query: 547 HHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYTWIYFLHSKSD 606
           HHALPFSH LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISF D YSRYTWIYFL+SKSD
Sbjct: 541 HHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSD 600

Query: 607 AFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVK 666
           AFLAFQKFKTCVEKSLGQSIKSLQT+G TEFKPFKPFLDQHGIEHRITCPYTSKQNDIV+
Sbjct: 601 AFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVE 660

Query: 667 RKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFP 726
           RKHR+IMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPTPVLDNISPLEKL CRKPNFP
Sbjct: 661 RKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFP 720

Query: 727 FLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 757
            LRVFGCKCYPY RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN
Sbjct: 721 SLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 780

[Close]
BLAST of Pay0003774 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1262.3 bits (3265), Expect = 0.0e+00
Identity = 671/891 (75.31%), Postives = 692/891 (77.67%), Query Frame = 0 

Query: 7   ISSPFRALVLRTNESSSPLIK-FWMTKQPNIVKEATSDDNFFLWKFQILTALEAYDLENF 66
           +SS    L +   E+SSP+ + F    + ++VK   +DD F LWKFQILTALEAYDLENF
Sbjct: 1   MSSTSSLLGVENTEASSPINQIFGSGNKISLVK--LNDDTFLLWKFQILTALEAYDLENF 60

Query: 67  LESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 126
           LESESEPPSKYLIST SSSASAT TPNP YKVWKRQDRLISSWLLGSMSEEILNQMLHCK
Sbjct: 61  LESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCK 120

Query: 127 SAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMPLKEYFLKIQHRVDALASINKPVS 186
           SAKEIW TLQGIFSSRYLAQAM+FKNKLHNIKK SMPLKEYFLKI   VDALASINKPVS
Sbjct: 121 SAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVS 180

Query: 187 SDDHILYILAGLGSDYQSMISVIFPRTESPS-----------KSQNESKLISENALPYVN 246
           SDDHILYILAGLGSDYQSMISVI  RT+SPS           +SQNESKLISE ALP VN
Sbjct: 181 SDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVN 240

Query: 247 IVTQTTEKGAESYIRTNENNYHNNHFYNQRGGRGNGRSNRGGRGNRNKPQCQICTNFGHS 306
           IVTQTTEKGAESYIRTN+NNYHNNH YNQRGGRGNGRSNRG RGNRNKPQCQIC   G+S
Sbjct: 241 IVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYS 300

Query: 307 ADRCFFRYTTRSNSSGYSPNSHNTSYTNMNNHPQMSAMVATPDLNIDSNWYPDSGATNHL 366
           ADRCFFRYT RSNSSGYSPNSHNTSYTNMNNHPQMSAMVA  DLNIDSNWYPDSGATNHL
Sbjct: 301 ADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHL 360

Query: 367 THSLSNLSTGSEYGGGNQIYAANGS----------------------------------- 426
           THSLSNLS GSEYGGGNQIYAANGS                                   
Sbjct: 361 THSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITK 420

Query: 427 ------------------------------------------------------------ 486
                                                                       
Sbjct: 421 NLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNS 480

Query: 487 ----------------------------------AVLKHIDYSSSTINKMNFCEPCAFGK 546
                                             AVL HID SS TINK+NFCE CA GK
Sbjct: 481 NTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGK 540

Query: 547 HHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYSRYTWIYFLHSKSD 606
           HHALPFSH LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISF D YSRYTWIYFL+SKSD
Sbjct: 541 HHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSD 600

Query: 607 AFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVK 666
           AFLAFQKFKTCVEKSLGQSIKSLQT+G TEFKPFKPFLDQHGIEHRITCPYTSKQNDIV+
Sbjct: 601 AFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVE 660

Query: 667 RKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFP 726
           RKHR+IMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPTPVLDNISPLEKL CRKPNFP
Sbjct: 661 RKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFP 720

Query: 727 FLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 757
            LRVFGCKCYPY RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN
Sbjct: 721 SLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDEN 780

[Close]
BLAST of Pay0003774 vs. NCBI nr
Match: KAA0067212.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 793.9 bits (2049), Expect = 1.5e-225
Identity = 414/519 (79.77%), Postives = 426/519 (82.08%), Query Frame = 0 

Query: 328 QMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSAVLKHIDY 387
           QMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGS  L    Y
Sbjct: 41  QMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSG-LPITHY 100

Query: 388 SSSTINKMNFCEPCAFGKHHALPFSHF-LTLYTHPLQ--------LITCDLWGPAVNVSH 447
            S + N               LPF  F L    H L         L+   L+   +  SH
Sbjct: 101 GSMSFNS------------STLPFKSFTLNNLLHDLDTGQVLLQGLLNDGLYKFTIQPSH 160

Query: 448 NGFRY----YISFFDT------------------YSRYTWIYFLHSKSDAFLAFQKFKTC 507
               +      S F+T                  +     +  + +  D   AFQKFKTC
Sbjct: 161 KRLHHSDSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPTVKAVLNHIDHSSAFQKFKTC 220

Query: 508 VEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVKRKHRHIMEMGL 567
           VEKSLGQSIKSLQT+G TEFKPFKPFLDQHGIEHRITCPYTSKQNDIV+RKHRHIMEMGL
Sbjct: 221 VEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRHIMEMGL 280

Query: 568 TLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFPFLRVFGCKCYP 627
           TLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKL CRKPNFPFLRVFGCKCYP
Sbjct: 281 TLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLFCRKPNFPFLRVFGCKCYP 340

Query: 628 YFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHS 687
           YFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHS
Sbjct: 341 YFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHS 400

Query: 688 SIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDD 747
           SIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDD
Sbjct: 401 SIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDD 460

Query: 748 GNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQTETCN 807
           GNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQTETCN
Sbjct: 461 GNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQTETCN 520

Query: 808 AKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIV 816
           AKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIV
Sbjct: 521 AKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIV 546

[Close]
BLAST of Pay0003774 vs. NCBI nr
Match: TYK18915.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 754.2 bits (1946), Expect = 1.3e-213
Identity = 373/395 (94.43%), Postives = 375/395 (94.94%), Query Frame = 0 

Query: 532 MEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNISPLEKLLCRKPNFPFLRVFG 591
           MEMGLTLLSQATLPLSFWDEAF TSVYLINLLPTPVLDNISPLEK+  RKPNFPFLRVFG
Sbjct: 1   MEMGLTLLSQATLPLSFWDEAFSTSVYLINLLPTPVLDNISPLEKVFFRKPNFPFLRVFG 60

Query: 592 CKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS 651
           CKCYPY RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS
Sbjct: 61  CKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS 120

Query: 652 FASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNSTIVYPLETGTQE 711
           FASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLN TIVYPLETGTQE
Sbjct: 121 FASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDYLNPTIVYPLETGTQE 180

Query: 712 SSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQ 771
           SSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQ
Sbjct: 181 SSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAFLIDYTQ 240

Query: 772 TETCNAKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIVD------------GSI 831
           TETCNAKEAFNHPHWKKAMEEEF+ALQKNGTWSLIPQNPNQKIV             GSI
Sbjct: 241 TETCNAKEAFNHPHWKKAMEEEFKALQKNGTWSLIPQNPNQKIVGCKWVFKIKRNSYGSI 300

Query: 832 SRYKARLVAKGFHQTPNIDYNETFSPVVKPITIRMLLTITIMKGWSIRQLDVNNAFLHGN 891
           SRYKARLVAKGFHQT NIDYNETFSPVVKPITIRMLLTITIMKGWSI QLDVNNAFLHGN
Sbjct: 301 SRYKARLVAKGFHQTHNIDYNETFSPVVKPITIRMLLTITIMKGWSIHQLDVNNAFLHGN 360

Query: 892 LDENVYMEQPFGFEVKSSYPVVCRLKKALYGLKQA 915
           LDENVYMEQPFGFEVKSSYPVVCRLKKALYGLKQA
Sbjct: 361 LDENVYMEQPFGFEVKSSYPVVCRLKKALYGLKQA 395

[Close]
BLAST of Pay0003774 vs. NCBI nr
Match: RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 655.2 bits (1689), Expect = 8.3e-184
Identity = 423/1106 (38.25%), Postives = 567/1106 (51.27%), Query Frame = 0 

Query: 43   DDNFFLWKFQILTALEAYDLENFLESESEPPSKYLISTGSSSASATRTPNPTYKVWKRQD 102
            DDNF +WK+QI  A+  Y LE FL    + P K +     +       PNP ++ ++RQD
Sbjct: 156  DDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMV-----TDKIGVLVPNPKFRDYQRQD 215

Query: 103  RLISSWLLGSMSEEILNQMLHCKSAKEIWGTLQGIFSSRYLAQAMKFKNKLHNIKKESMP 162
             L+ SWLL S+    L Q++ C SA E+W T+   F+S+  A+ M +K+++  +KK+ + 
Sbjct: 216  HLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLT 275

Query: 163  LKEYFLKIQHRVDALASINKPVSSDDHILYILAGLGSDYQSMISVIFPRTESPSKSQNES 222
            +++Y  K+++  D LA+    +S  DHIL I+ GLG +Y+S+I+VI  +  SPS     S
Sbjct: 276  MRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTS 335

Query: 223  KL----------ISENALPYVNIVTQTTEKGAESYIRTNENNYHNNHFY--NQRGG---- 282
             L          IS N L  VN  +Q + +G  S    N N Y ++ F   NQ GG    
Sbjct: 336  TLIAHEGRIAHKISSNDLS-VNYTSQYSNRGPSS--SWNSNGYPSSGFQNRNQFGGNQVT 395

Query: 283  RGNGRSNRG-GRGNRN---KPQCQICTNFGHSADRCFFRYT------------------- 342
            RG+   NRG GRG      KPQCQ+C  FGH+  RCF+RY                    
Sbjct: 396  RGSFVHNRGRGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGS 455

Query: 343  -TRSNSSGYSPNSHNTSYTNMN-----NHPQMSAMVATPDLNIDSNWYPDSGATNHLTHS 402
              R+ +SG   ++ N + T  +     ++ +M AMVATP+   +  W+PDSGATNH+TH 
Sbjct: 456  GARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHD 515

Query: 403  LSNLSTGSEYGGGNQIYAANGSAV-LKHIDY----SSSTINKMNF--------------- 462
            L NL++G+EY G ++I+  NG+ + + HI      SSS+ NK+ F               
Sbjct: 516  LGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLL 575

Query: 463  ------------------------------------------------------------ 522
                                                                        
Sbjct: 576  SVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSN 635

Query: 523  ------------------------------------------------------------ 582
                                                                        
Sbjct: 636  DKNELTCCNASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTK 695

Query: 583  -----CEPCAFGKHHALPFSHFLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFFDTYS 642
                 C  C  GK H LPF    T+YT PLQL+  DLWGPA   S  GF YY+SF D YS
Sbjct: 696  SGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYS 755

Query: 643  RYTWIYFLHSKSDAFLAFQKFKTCVEKSLGQSIKSLQTNGDTEFKPFKPFLDQHGIEHRI 702
            RYTW+YFL +KS    AF  FK   E   G  +K+ QT+   EF+  K + +Q+GI HR+
Sbjct: 756  RYTWVYFLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRL 815

Query: 703  TCPYTSKQNDIVKRKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVLDNIS 762
            +CP+TSKQN I++RKHRHI+E+GLTLL+QA+LPL +W +AF T+V+LIN LPT VL    
Sbjct: 816  SCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKC 875

Query: 763  PLEKLLCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDG 822
            P E L   KPN+  L+VFGC C+P+ RPY  HKL  RS+PCTFLGYS+ HKGYKCL   G
Sbjct: 876  PYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQG 935

Query: 823  RLFISRHVLFDENSFPYA-------SFASHSS-----IPKSKNV--------LSPPLHSI 882
            R+FISR V+FDE  FP+A          SHS+     IP  KN+        LS P  S 
Sbjct: 936  RMFISRSVVFDETRFPFADRLQKPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSA 995

Query: 883  IPSSLMNHN--EDRRHTDTVSDNTDYLNSTIVYPLETGTQESSRDDGNSGGITQSPSPME 923
              S  ++ N   D R       NTD  ++  +         SS      G I  S +  E
Sbjct: 996  QSSHQLDENLGSDIRSVQQDLSNTDSSSTVPILNESASIPSSSNLYALPGTIPLSTNSDE 1055

[Close]
BLAST of Pay0003774 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 129.0 bits (323), Expect = 1.9e-29
Identity = 87/251 (34.66%), Postives = 128/251 (51.00%), Query Frame = 0 

Query: 701 IVYPLETGTQESSRDDGNSGGITQS-PSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDI 760
           +V   +  T  SS D   S  I    P P        +     LQ    H + + + HDI
Sbjct: 1   MVSDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDI 60

Query: 761 FK----------PKAFLIDYTQT-ETCNAKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQ 820
            +            +FL+   +  E     EA     W  AM++E  A++   TW +   
Sbjct: 61  SQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 120

Query: 821 NPNQKIV------------DGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPITIRMLL 880
            PN+K +            DG+I RYKARLVAKG+ Q   ID+ ETFSPV K  +++++L
Sbjct: 121 PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 180

Query: 881 TITIMKGWSIRQLDVNNAFLHGNLDENVYMEQPFGFEVK--SSYP--VVCRLKKALYGLK 924
            I+ +  +++ QLD++NAFL+G+LDE +YM+ P G+  +   S P   VC LKK++YGLK
Sbjct: 181 AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 240

[Close]
BLAST of Pay0003774 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.3 bits (207), Expect = 5.4e-16
Identity = 54/129 (41.86%), Postives = 71/129 (55.04%), Query Frame = 0 

Query: 751 MITQSKHDIFK--PKAFLIDYTQTETCNAKE-------AFNHPHWKKAMEEEFEALQKNG 810
           M+T+SK  I K  PK     Y+ T T   K+       A   P W +AM+EE +AL +N 
Sbjct: 1   MLTRSKAGINKLNPK-----YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNK 60

Query: 811 TWSLIPQNPNQKIV------------DGSISRYKARLVAKGFHQTPNIDYNETFSPVVKP 859
           TW L+P   NQ I+            DG++ R KARLVAKGFHQ   I + ET+SPVV+ 
Sbjct: 61  TWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRT 120

[Close]
BLAST of Pay0003774 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 4.3e-13
Identity = 57/223 (25.56%), Postives = 111/223 (49.78%), Query Frame = 0 

Query: 81  GSSSASATRTPNPTYKVWKRQDRLISSWLLGSMSEEILNQMLHCK-SAKEIWGTLQGIFS 140
           G    S+T TP  T K WK +D L+  W+ G++++ +L+ ++    +A+++W +L+ +F 
Sbjct: 51  GHIDGSSTPTP-MTEKRWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFR 110

Query: 141 SRYLAQAMKFKNKLHNIKKESMPLKEYFLKIQHRVDALASINKPVSSDDHILYILAGLGS 200
               A+A++F+N+L     + + + EY  K++   D L +++ P+S    ++++L GL  
Sbjct: 111 DNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTE 170

Query: 201 DYQSMISVIFPRTESPSKSQNESKLISENAL--------------PYVNIVTQTTEKGAE 260
            Y  +++VI  ++  PS ++  S L+ E +               P ++ V  T  +  E
Sbjct: 171 KYDYILNVIKHKSPFPSFTEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQE 230

Query: 261 SYIRTNENNYHN-----NHFYNQRGGRGNGRSNRGGRGNRNKP 284
            Y +   NN  N     +   N+ GG  +GR N       N+P
Sbjct: 231 RYPQEYHNNNSNMGRGRSKKKNRGGGSSDGRYNNNNNWRLNQP 272

[Close]
BLAST of Pay0003774 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 3.9e-06
Identity = 26/136 (19.12%), Postives = 66/136 (48.53%), Query Frame = 0 

Query: 35  NIVKEATSDDNFFLWKFQILTALEAYDLENFLESESEPPSKYLISTGSSSASATRTPNPT 94
           +I K +  +DN+  WK +  + L       F++     P  +               +P 
Sbjct: 31  SIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPF---------------SPL 90

Query: 95  YKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWGTLQGIFSSRYLAQAMKFKNKLH 154
           Y+ W++ + ++  WL+ SM++++L  +++ ++A ++W  L+ +F      +  + + +L 
Sbjct: 91  YQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLA 150

Query: 155 NIKKESMPLKEYFLKI 171
            +++    ++EYF K+
Sbjct: 151 TLRQGGDSVEEYFGKL 151

The following BLAST results are available for this feature:
BLAST of Pay0003774 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94HW22.9e-12330.38Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT944.8e-11829.93Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P109781.4e-7226.39Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041467.8e-5228.60Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925207.7e-1541.86Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Pay0003774 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CH970.0e+0075.42Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7U2330.0e+0075.31Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7VFQ67.2e-22679.77Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... [more]
A0A5D3D5W06.4e-21494.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A438FJP64.0e-18438.25Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
BLAST of Pay0003774 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10642.10.0e+0075.42Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0048297.10.0e+0075.31Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0067212.11.5e-22579.77retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa][more]
TYK18915.11.3e-21394.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
RVW60229.18.3e-18438.25Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
BLAST of Pay0003774 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.11.9e-2934.66cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.15.4e-1641.86Reverse transcriptase (RNA-dependent DNA polymerase) [more]
AT5G48050.14.3e-1325.56CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
AT1G21280.13.9e-0619.12CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 98..228
e-value: 2.3E-19
score: 69.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 705..741
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..283
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 34..376
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 34..376
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 416..589
e-value: 5.3E-28
score: 99.7
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 813..922
e-value: 2.2E-37
score: 128.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 417..581
score: 18.469671
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 418..579
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 806..920

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0003774.1Pay0003774.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding