Pay0003446 (gene) Melon (Payzawat) v1

Overview


Name	Pay0003446
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Envelope-like protein
Location	chr04: 6679916 .. 6680565 (+)
RNA-Seq Expression	Pay0003446
Synteny	Pay0003446

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACTGTTGATTCCTCTGTTCCCGCACCTTCAGGTACACATGCACCAAATATCTCTGTGTCTCCTCTGTCTGATATGGACTCTGATGATCTAGATGATGTACCTTGGCTCATTTTTTGAAGAAGACCATTGTCCCTAAGGTTACTGTTGAATTGCCTGCAGCTCCTTTCGAGTCTGTTCACTCTTAGGAGAGCTCATCGACTAAAGGAGTGTTTGTTTCTACTCCTGGTATTGCTTCTGATTCTAGTGTTCAACCTGGACCAACAACTCTCTCCCCTCCTGCGTCACTTCCCTTTGAACCAAATGTTGCCCATGCATCTGCTCCTGATAATGTTCCTAATAATGTTCCTGGTGATGTTTCTGCTACACGTGAAGGAAGAACTGAAGTTCGAAGTGATGCAAATGAGGAGGACCCTCCAAATCCTGACATATGGTTTGAAAAAATTCCTACCAATGCTGATGATAATGTTGCGGTTCCACCTGGTTCTCCTGAAATTCTCGTTGCACCAAAGCCAGCAAAGCAAAAATCTCAACAAAATCGGTGCAATATAATAACCAAAACTTGTAGAAAGAAGATTCCTCATAATATTCCATCTATTCCCATTGATGGAATCTCTTTTCATCACGAGGAACATGTTCAGCGTTGA

mRNA sequence

ATGCAGACTGTTGATTCCTCTGTTCCCGCACCTTCAGGTACACATGCACCAAATATCTCTGTGTCTCCTCTGTCTGATATGGACTCTGATGATCTAGATGATGAGAGCTCATCGACTAAAGGAGTGTTTGTTTCTACTCCTGGTATTGCTTCTGATTCTAGTGTTCAACCTGGACCAACAACTCTCTCCCCTCCTGCGTCACTTCCCTTTGAACCAAATGTTGCCCATGCATCTGCTCCTGATAATGTTCCTAATAATGTTCCTGGTGATGTTTCTGCTACACGTGAAGGAAGAACTGAAGTTCGAAGTGATGCAAATGAGGAGGACCCTCCAAATCCTGACATATGGTTTGAAAAAATTCCTACCAATGCTGATGATAATGTTGCGGTTCCACCTGGTTCTCCTGAAATTCTCGTTGCACCAAAGCCAGCAAAGCAAAAATCTCAACAAAATCGGTGCAATATAATAACCAAAACTTGTAGAAAGAAGATTCCTCATAATATTCCATCTATTCCCATTGATGGAATCTCTTTTCATCACGAGGAACATGTTCAGCGTTGA

Coding sequence (CDS)

ATGCAGACTGTTGATTCCTCTGTTCCCGCACCTTCAGGTACACATGCACCAAATATCTCTGTGTCTCCTCTGTCTGATATGGACTCTGATGATCTAGATGATGAGAGCTCATCGACTAAAGGAGTGTTTGTTTCTACTCCTGGTATTGCTTCTGATTCTAGTGTTCAACCTGGACCAACAACTCTCTCCCCTCCTGCGTCACTTCCCTTTGAACCAAATGTTGCCCATGCATCTGCTCCTGATAATGTTCCTAATAATGTTCCTGGTGATGTTTCTGCTACACGTGAAGGAAGAACTGAAGTTCGAAGTGATGCAAATGAGGAGGACCCTCCAAATCCTGACATATGGTTTGAAAAAATTCCTACCAATGCTGATGATAATGTTGCGGTTCCACCTGGTTCTCCTGAAATTCTCGTTGCACCAAAGCCAGCAAAGCAAAAATCTCAACAAAATCGGTGCAATATAATAACCAAAACTTGTAGAAAGAAGATTCCTCATAATATTCCATCTATTCCCATTGATGGAATCTCTTTTCATCACGAGGAACATGTTCAGCGTTGA

Protein sequence

MQTVDSSVPAPSGTHAPNISVSPLSDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPTTLSPPASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPEILVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHHEEHVQR

Homology

[Close]

BLAST of Pay0003446 vs. ExPASy TrEMBL
Match: A0A1S3CMC4 (uncharacterized protein LOC103502581 OS=Cucumis melo OX=3656 GN=LOC103502581 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MQTVDSSVPAPSGTHAPNISVSPLSDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPT 60
           MQTVDSSVPAPSGTHAPNISVSPL+DMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPT
Sbjct: 1   MQTVDSSVPAPSGTHAPNISVSPLTDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPT 60

Query: 61  TLSPPASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI 120
           TLSPPASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI
Sbjct: 61  TLSPPASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI 120

Query: 121 PTNADDNVAVPPGSPEILVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH 180
           PTNADDNVAVPPGSPE LVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH
Sbjct: 121 PTNADDNVAVPPGSPENLVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH 180

Query: 181 EEHVQR 187
           EEHVQR
Sbjct: 181 EEHVQR 186

[Close]

BLAST of Pay0003446 vs. ExPASy TrEMBL
Match: A0A5D3BIE7 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00670 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.4e-57
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 35  ESSSTKGVFVSTPGIASDSSVQPGPTTLSPPASLPFEPNVAHASAPDNVPNNVPGDVSAT 94
           ESSSTKGVFVSTPGIASDSSVQPGPTTLSPPASLPFEPNVAHASAPDNVPNNVPGDVSAT
Sbjct: 752 ESSSTKGVFVSTPGIASDSSVQPGPTTLSPPASLPFEPNVAHASAPDNVPNNVPGDVSAT 811

Query: 95  REGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPEILVAPKPAKQKSQQNR 153
           REGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPE LVAPKPAKQKSQQNR
Sbjct: 812 REGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPENLVAPKPAKQKSQQNR 869

[Close]

BLAST of Pay0003446 vs. ExPASy TrEMBL
Match: A0A5A7STQ8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001570 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.4e-40
Identity = 108/186 (58.06%), Postives = 128/186 (68.82%), Query Frame = 0


Query: 2   QTVDSSVPAPSGTHAPNISVSPLSDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPTT 61
           +TVDS   AP GT+APN+  + L DMD DDLDD  S+   +   T      S+VQPGP+ 
Sbjct: 482 ETVDSPNHAPLGTYAPNVPETLLFDMDLDDLDDVPSAR--LLKKTTIPEHTSNVQPGPSM 541

Query: 62  LSP-PASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI 121
            SP   SLP E NVAHAS        VP DVSA  E RT+VR+  +E DPPNP+I  E++
Sbjct: 542 HSPLSESLPSESNVAHAS--------VPCDVSAEPEVRTDVRNKEDELDPPNPNIHSEEV 601

Query: 122 PTNADDNVAVPPGSPEILVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH 181
           P  AD+N  VP  SPEI +A +PAK+KSQQNRCNI TKT RKKIP NIPS+PIDGISFHH
Sbjct: 602 PAAADNNPTVPHASPEIPIASQPAKRKSQQNRCNITTKTNRKKIPPNIPSVPIDGISFHH 657

Query: 182 EEHVQR 187
           EE+VQR
Sbjct: 662 EENVQR 657

[Close]

BLAST of Pay0003446 vs. ExPASy TrEMBL
Match: A0A1S3BN53 (uncharacterized protein LOC103491875 OS=Cucumis melo OX=3656 GN=LOC103491875 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 9.3e-40
Identity = 101/174 (58.05%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 14  THAPNISVSPLSDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPTTLSPPA-SLPFEP 73
           T+ P ++V   +         ESSS +GVFV TPGI   S+VQPGP+  SPP+ SLPF P
Sbjct: 18  TNVPEVTVQIPATPFVSIHSQESSSIEGVFVPTPGIPLASNVQPGPSVHSPPSVSLPFAP 77

Query: 74  NVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPP 133
           + AHA  PD    NVPGDVS   EG+T+ +SD NE DP NPD+  E++ TNADD  A   
Sbjct: 78  DDAHAYVPD----NVPGDVSVAPEGKTDFQSDENEVDPSNPDVCTEEVSTNADDTPATTL 137

Query: 134 GSPEILVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHHEEHVQR 187
            S E+ VA KP K+KSQQNR NI TKT RKKIP NIPS+PIDGISFHHEE+VQR
Sbjct: 138 NSSEVPVAQKPIKRKSQQNRRNITTKTGRKKIPPNIPSVPIDGISFHHEENVQR 187

[Close]

BLAST of Pay0003446 vs. ExPASy TrEMBL
Match: A0A5D3C9A3 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00570 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.6e-39
Identity = 97/146 (66.44%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 42  VFVSTPGIASDSSVQPGPTTLSPP-ASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTE 101
           +FV T GI   S+VQPG    SPP ASLPFE +V HA         V GDVSA  EGRT+
Sbjct: 1   MFVPTSGIHHTSNVQPGSLVHSPPSASLPFELDVTHAF--------VLGDVSAAPEGRTD 60

Query: 102 VRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPEILVAPKPAKQKSQQNRCNIITKTC 161
           VR D NE DPPNPDI  E++  NADDN+AVPPGSPEI +A KPAK+KSQQNRCNI TKT 
Sbjct: 61  VRRDENEVDPPNPDIHPEEVLANADDNLAVPPGSPEIPIALKPAKRKSQQNRCNITTKTR 120

Query: 162 RKKIPHNIPSIPIDGISFHHEEHVQR 187
           RKKIP NIPS+ IDGISF+HEE+VQR
Sbjct: 121 RKKIPPNIPSVSIDGISFYHEENVQR 138

[Close]

BLAST of Pay0003446 vs. NCBI nr
Match: XP_008464772.1 (PREDICTED: uncharacterized protein LOC103502581 [Cucumis melo])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MQTVDSSVPAPSGTHAPNISVSPLSDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPT 60
           MQTVDSSVPAPSGTHAPNISVSPL+DMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPT
Sbjct: 1   MQTVDSSVPAPSGTHAPNISVSPLTDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPT 60

Query: 61  TLSPPASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI 120
           TLSPPASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI
Sbjct: 61  TLSPPASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI 120

Query: 121 PTNADDNVAVPPGSPEILVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH 180
           PTNADDNVAVPPGSPE LVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH
Sbjct: 121 PTNADDNVAVPPGSPENLVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH 180

Query: 181 EEHVQR 187
           EEHVQR
Sbjct: 181 EEHVQR 186

[Close]

BLAST of Pay0003446 vs. NCBI nr
Match: KAA0032727.1 (envelope-like protein [Cucumis melo var. makuwa] >TYJ98759.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.9 bits (585), Expect = 1.7e-56
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 35  ESSSTKGVFVSTPGIASDSSVQPGPTTLSPPASLPFEPNVAHASAPDNVPNNVPGDVSAT 94
           ESSSTKGVFVSTPGIASDSSVQPGPTTLSPPASLPFEPNVAHASAPDNVPNNVPGDVSAT
Sbjct: 752 ESSSTKGVFVSTPGIASDSSVQPGPTTLSPPASLPFEPNVAHASAPDNVPNNVPGDVSAT 811

Query: 95  REGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPEILVAPKPAKQKSQQNR 153
           REGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPE LVAPKPAKQKSQQNR
Sbjct: 812 REGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPENLVAPKPAKQKSQQNR 869

[Close]

BLAST of Pay0003446 vs. NCBI nr
Match: KAA0032911.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 176.0 bits (445), Expect = 3.0e-40
Identity = 108/186 (58.06%), Postives = 128/186 (68.82%), Query Frame = 0


Query: 2   QTVDSSVPAPSGTHAPNISVSPLSDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPTT 61
           +TVDS   AP GT+APN+  + L DMD DDLDD  S+   +   T      S+VQPGP+ 
Sbjct: 482 ETVDSPNHAPLGTYAPNVPETLLFDMDLDDLDDVPSAR--LLKKTTIPEHTSNVQPGPSM 541

Query: 62  LSP-PASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKI 121
            SP   SLP E NVAHAS        VP DVSA  E RT+VR+  +E DPPNP+I  E++
Sbjct: 542 HSPLSESLPSESNVAHAS--------VPCDVSAEPEVRTDVRNKEDELDPPNPNIHSEEV 601

Query: 122 PTNADDNVAVPPGSPEILVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHH 181
           P  AD+N  VP  SPEI +A +PAK+KSQQNRCNI TKT RKKIP NIPS+PIDGISFHH
Sbjct: 602 PAAADNNPTVPHASPEIPIASQPAKRKSQQNRCNITTKTNRKKIPPNIPSVPIDGISFHH 657

Query: 182 EEHVQR 187
           EE+VQR
Sbjct: 662 EENVQR 657

[Close]

BLAST of Pay0003446 vs. NCBI nr
Match: XP_008450214.1 (PREDICTED: uncharacterized protein LOC103491875 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-39
Identity = 101/174 (58.05%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 14  THAPNISVSPLSDMDSDDLDDESSSTKGVFVSTPGIASDSSVQPGPTTLSPPA-SLPFEP 73
           T+ P ++V   +         ESSS +GVFV TPGI   S+VQPGP+  SPP+ SLPF P
Sbjct: 18  TNVPEVTVQIPATPFVSIHSQESSSIEGVFVPTPGIPLASNVQPGPSVHSPPSVSLPFAP 77

Query: 74  NVAHASAPDNVPNNVPGDVSATREGRTEVRSDANEEDPPNPDIWFEKIPTNADDNVAVPP 133
           + AHA  PD    NVPGDVS   EG+T+ +SD NE DP NPD+  E++ TNADD  A   
Sbjct: 78  DDAHAYVPD----NVPGDVSVAPEGKTDFQSDENEVDPSNPDVCTEEVSTNADDTPATTL 137

Query: 134 GSPEILVAPKPAKQKSQQNRCNIITKTCRKKIPHNIPSIPIDGISFHHEEHVQR 187
            S E+ VA KP K+KSQQNR NI TKT RKKIP NIPS+PIDGISFHHEE+VQR
Sbjct: 138 NSSEVPVAQKPIKRKSQQNRRNITTKTGRKKIPPNIPSVPIDGISFHHEENVQR 187

[Close]

BLAST of Pay0003446 vs. NCBI nr
Match: TYK08441.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 9.6e-39
Identity = 97/146 (66.44%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 42  VFVSTPGIASDSSVQPGPTTLSPP-ASLPFEPNVAHASAPDNVPNNVPGDVSATREGRTE 101
           +FV T GI   S+VQPG    SPP ASLPFE +V HA         V GDVSA  EGRT+
Sbjct: 1   MFVPTSGIHHTSNVQPGSLVHSPPSASLPFELDVTHAF--------VLGDVSAAPEGRTD 60

Query: 102 VRSDANEEDPPNPDIWFEKIPTNADDNVAVPPGSPEILVAPKPAKQKSQQNRCNIITKTC 161
           VR D NE DPPNPDI  E++  NADDN+AVPPGSPEI +A KPAK+KSQQNRCNI TKT 
Sbjct: 61  VRRDENEVDPPNPDIHPEEVLANADDNLAVPPGSPEIPIALKPAKRKSQQNRCNITTKTR 120

Query: 162 RKKIPHNIPSIPIDGISFHHEEHVQR 187
           RKKIP NIPS+ IDGISF+HEE+VQR
Sbjct: 121 RKKIPPNIPSVSIDGISFYHEENVQR 138

The following BLAST results are available for this feature:

BLAST of Pay0003446 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0003446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMC4	1.3e-97	98.92	uncharacterized protein LOC103502581 OS=Cucumis melo OX=3656 GN=LOC103502581 PE=...	[more]
A0A5D3BIE7	8.4e-57	99.15	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15...	[more]
A0A5A7STQ8	1.4e-40	58.06	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G0...	[more]
A0A1S3BN53	9.3e-40	58.05	uncharacterized protein LOC103491875 OS=Cucumis melo OX=3656 GN=LOC103491875 PE=...	[more]
A0A5D3C9A3	4.6e-39	66.44	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold65...	[more]

BLAST of Pay0003446 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464772.1	2.6e-97	98.92	PREDICTED: uncharacterized protein LOC103502581 [Cucumis melo]	[more]
KAA0032727.1	1.7e-56	99.15	envelope-like protein [Cucumis melo var. makuwa] >TYJ98759.1 envelope-like prote...	[more]
KAA0032911.1	3.0e-40	58.06	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
XP_008450214.1	1.9e-39	58.05	PREDICTED: uncharacterized protein LOC103491875 [Cucumis melo]	[more]
TYK08441.1	9.6e-39	66.44	envelope-like protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0003446 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0003446.1	Pay0003446.1	mRNA