Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCTACATCAAGTTCCTGAAAGACATCTTGGCAAAGAAGAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAGCAACAAACGACGACTTTAAGAATGGAGTGCCAGAGAAGATGACAGATCCTAGAAGCTTCACGGTTTCCTACTCAAAAGGTGGAATGGATTTAGGTTGTGCTCTATGCGACCTTGGGGCAAGCATCAATTTGATGCCTCTCTCTATCTTCAAGAAAGTAGGGATAGGGGAGGTACAACCAACTCATATAAGGCTTTAATTTGCTGACAGATCCATTGCTAGCCAGAGGGCAAGATTGAAGATGTTTTGGTGAAAGTGGACAAGTTTTTGTTTTCCGAAGACTTTGTTATTCTGGATTACAAAGCTGATCGGAAGGTTCCTATCATTTTAGGGCGGCCATTCCTATCAACTAGTTGCACCCTCATAGGCGTCCACCAAGGGGAGTTGACAATGCATTTTAATGATGAGGAGATTAAGTTCAACGTTGTCAAACCGATGAAATTTCCCTCTGATGTTGAGAATTATAGCGCAATAAAGTCCTTTGGATGGGACTATTGCGAGGAAGAAGCCTATTATGAGTTGTTTAACACTTAA
mRNA sequence
ATGTCCTCCTACATCAAGTTCCTGAAAGACATCTTGGCAAAGAAGAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAGCAACAAACGACGACTTTAAGAATGGAGTGCCAGAGAAGATGACAGATCCTAGAAGCTTCACGGTTTCCTACTCAAAAGGTGGAATGGATTTAGGTTGTGCTCTATGCGACCTTGGGGCAAGCATCAATTTGATGCCTCTCTCTATCTTCAAGAAAGTAGGGATAGGGGAGCCAGAGGGCAAGATTGAAGATGTTTTGGTGAAAGTGGACAAGTTTTTGTTTTCCGAAGACTTTGTTATTCTGGATTACAAAGCTGATCGGAAGGTTCCTATCATTTTAGGGCGGCCATTCCTATCAACTAGTTGCACCCTCATAGGCGTCCACCAAGGGGAGTTGACAATGCATTTTAATGATGAGGAGATTAAGTTCAACGTTGTCAAACCGATGAAATTTCCCTCTGATGTTGAGAATTATAGCGCAATAAAGTCCTTTGGATGGGACTATTGCGAGGAAGAAGCCTATTATGAGTTGTTTAACACTTAA
Coding sequence (CDS)
ATGTCCTCCTACATCAAGTTCCTGAAAGACATCTTGGCAAAGAAGAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAGCAACAAACGACGACTTTAAGAATGGAGTGCCAGAGAAGATGACAGATCCTAGAAGCTTCACGGTTTCCTACTCAAAAGGTGGAATGGATTTAGGTTGTGCTCTATGCGACCTTGGGGCAAGCATCAATTTGATGCCTCTCTCTATCTTCAAGAAAGTAGGGATAGGGGAGCCAGAGGGCAAGATTGAAGATGTTTTGGTGAAAGTGGACAAGTTTTTGTTTTCCGAAGACTTTGTTATTCTGGATTACAAAGCTGATCGGAAGGTTCCTATCATTTTAGGGCGGCCATTCCTATCAACTAGTTGCACCCTCATAGGCGTCCACCAAGGGGAGTTGACAATGCATTTTAATGATGAGGAGATTAAGTTCAACGTTGTCAAACCGATGAAATTTCCCTCTGATGTTGAGAATTATAGCGCAATAAAGTCCTTTGGATGGGACTATTGCGAGGAAGAAGCCTATTATGAGTTGTTTAACACTTAA
Protein sequence
MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEPEGKIEDVLVKVDKFLFSEDFVILDYKADRKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEEAYYELFNT
Homology
BLAST of Pay0003385 vs. ExPASy TrEMBL
Match:
A0A5D3DPZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00150 PE=4 SV=1)
HSP 1 Score: 374.8 bits (961), Expect = 2.1e-100
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0
Query: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG
Sbjct: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
Query: 61 CALCDLGASINLMPLSIFKKVGIGEPEGKIEDVLVKVDKFLFSEDFVILDYKADRKVPII 120
CALCDLGASINLMPLSIFKKVGIG EGKIEDVLVKVDKFLFSEDFVILDYKADRKVPII
Sbjct: 61 CALCDLGASINLMPLSIFKKVGIG--EGKIEDVLVKVDKFLFSEDFVILDYKADRKVPII 120
Query: 121 LGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEE 180
LGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEE
Sbjct: 121 LGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEE 180
Query: 181 AYYELFNT 189
AYYELFNT
Sbjct: 181 AYYELFNT 186
BLAST of Pay0003385 vs. ExPASy TrEMBL
Match:
A0A5D3CA15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00120 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 9.7e-61
Identity = 126/185 (68.11%), Postives = 139/185 (75.14%), Query Frame = 0
Query: 3 SYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCA 62
SY+KFLKDIL KKR+INDFE + LTQA +D KN VPEKM D S + S GGMDLGCA
Sbjct: 32 SYVKFLKDILGKKRRINDFEIMTLTQAISDVLKNRVPEKMIDLGSLIIPCSIGGMDLGCA 91
Query: 63 LCDLGASINLMPLSIFKKVGIGEPEGKIEDVLVKVDKFLFSEDFVILDYKADRKVPIILG 122
LCDLG +INL PLSIFKK+ GE VDKFLF DFVILDYK + +VPIILG
Sbjct: 92 LCDLGETINLRPLSIFKKLETGE-----------VDKFLFLVDFVILDYKENLEVPIILG 151
Query: 123 RPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEEAY 182
R F STSC LI VHQ ELTM FNDEEIKFNVV MKFP DVENY+AI+S GWDYC+E+AY
Sbjct: 152 RLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNAIESLGWDYCKEKAY 205
Query: 183 YELFN 188
Y FN
Sbjct: 212 YGRFN 205
BLAST of Pay0003385 vs. ExPASy TrEMBL
Match:
A0A1S3BHX3 (uncharacterized protein LOC103490055 OS=Cucumis melo OX=3656 GN=LOC103490055 PE=4 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 4.8e-52
Identity = 118/188 (62.77%), Postives = 136/188 (72.34%), Query Frame = 0
Query: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
M SY KFL DILAKKR+INDF+T+AL QAT+D +KNGV EKMT P SF V S GMDLG
Sbjct: 1 MPSYAKFLTDILAKKRRINDFQTMALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLG 60
Query: 61 CALCDLGASINLMPLSIFKKVGIGE-----------------PEGKIEDVLVKVDKFLFS 120
LCDLGASINLMPLSIFKK+ I E P+GKIEDVLVKVDKFLF
Sbjct: 61 HVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFF 120
Query: 121 EDFVILDYKADRKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDV 172
DF+ILDY+AD +V IIL R FLST L +HQGELT+ FN++EIKFNV+ MKFP D
Sbjct: 121 ADFIILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDD 180
BLAST of Pay0003385 vs. ExPASy TrEMBL
Match:
A0A5D3BDT2 (RT_RNaseH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00330 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 2.4e-51
Identity = 117/187 (62.57%), Postives = 133/187 (71.12%), Query Frame = 0
Query: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
M SY KFL DILAKKR+INDF+T+AL QAT+D +KNGV EKMT P SF V S GMDLG
Sbjct: 1 MPSYAKFLTDILAKKRRINDFQTMALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLG 60
Query: 61 CALCDLGASINLMPLSIFKKVGIGE-----------------PEGKIEDVLVKVDKFLFS 120
LCDLGASINLMPLSIFKK+ I E P+GKIEDVLVKVDKFLF
Sbjct: 61 HVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFF 120
Query: 121 EDFVILDYKADRKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDV 171
DF+ILDY+AD +V IIL R FLST L +HQGELT+ FN++EIKFNV+ MKFP D
Sbjct: 121 ADFIILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDD 180
BLAST of Pay0003385 vs. ExPASy TrEMBL
Match:
A0A5A7VJ95 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00710 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 3.5e-50
Identity = 112/179 (62.57%), Postives = 129/179 (72.07%), Query Frame = 0
Query: 12 LAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASIN 71
+AKK + ND ETVALT T+D KNG P+KMTD RSFTV S MDLG LCDLGASIN
Sbjct: 90 MAKKGRNNDCETVALTLETSDILKNGAPKKMTDCRSFTVPCSINNMDLGHVLCDLGASIN 149
Query: 72 LMPLSIFKKV-----------------GIGEPEGKIEDVLVKVDKFLFSEDFVILDYKAD 131
LMPLSIFKK+ I + EGKIED+LVKVDKFLF DF+ILDY+A+
Sbjct: 150 LMPLSIFKKLEIEEVQPMHMRLQFVDRSIAKHEGKIEDILVKVDKFLFHADFIILDYEAN 209
Query: 132 RKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFG 174
++VPII GRPFLST LI VHQGELTM FND E+KFNV+ MKFP+D +NYS I+S G
Sbjct: 210 QEVPIIFGRPFLSTGHALIDVHQGELTMRFND-EVKFNVMNAMKFPTDDKNYSMIESLG 267
BLAST of Pay0003385 vs. NCBI nr
Match:
KAA0035429.1 (uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa] >TYK25723.1 uncharacterized protein E5676_scaffold862G00150 [Cucumis melo var. makuwa])
HSP 1 Score: 374.8 bits (961), Expect = 4.4e-100
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0
Query: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG
Sbjct: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
Query: 61 CALCDLGASINLMPLSIFKKVGIGEPEGKIEDVLVKVDKFLFSEDFVILDYKADRKVPII 120
CALCDLGASINLMPLSIFKKVGIG EGKIEDVLVKVDKFLFSEDFVILDYKADRKVPII
Sbjct: 61 CALCDLGASINLMPLSIFKKVGIG--EGKIEDVLVKVDKFLFSEDFVILDYKADRKVPII 120
Query: 121 LGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEE 180
LGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEE
Sbjct: 121 LGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEE 180
Query: 181 AYYELFNT 189
AYYELFNT
Sbjct: 181 AYYELFNT 186
BLAST of Pay0003385 vs. NCBI nr
Match:
KAA0065469.1 (uncharacterized protein E6C27_scaffold17G001650 [Cucumis melo var. makuwa] >TYK08711.1 uncharacterized protein E5676_scaffold76G00120 [Cucumis melo var. makuwa])
HSP 1 Score: 243.0 bits (619), Expect = 2.0e-60
Identity = 126/185 (68.11%), Postives = 139/185 (75.14%), Query Frame = 0
Query: 3 SYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCA 62
SY+KFLKDIL KKR+INDFE + LTQA +D KN VPEKM D S + S GGMDLGCA
Sbjct: 32 SYVKFLKDILGKKRRINDFEIMTLTQAISDVLKNRVPEKMIDLGSLIIPCSIGGMDLGCA 91
Query: 63 LCDLGASINLMPLSIFKKVGIGEPEGKIEDVLVKVDKFLFSEDFVILDYKADRKVPIILG 122
LCDLG +INL PLSIFKK+ GE VDKFLF DFVILDYK + +VPIILG
Sbjct: 92 LCDLGETINLRPLSIFKKLETGE-----------VDKFLFLVDFVILDYKENLEVPIILG 151
Query: 123 RPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDVENYSAIKSFGWDYCEEEAY 182
R F STSC LI VHQ ELTM FNDEEIKFNVV MKFP DVENY+AI+S GWDYC+E+AY
Sbjct: 152 RLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNAIESLGWDYCKEKAY 205
Query: 183 YELFN 188
Y FN
Sbjct: 212 YGRFN 205
BLAST of Pay0003385 vs. NCBI nr
Match:
XP_030477929.1 (uncharacterized protein LOC115694963 [Cannabis sativa])
HSP 1 Score: 215.3 bits (547), Expect = 4.5e-52
Identity = 109/186 (58.60%), Postives = 134/186 (72.04%), Query Frame = 0
Query: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
M +Y+KFLKDIL KKR++ +FETVALT+ + K+ +P K+ DP SFT+ S GG D+G
Sbjct: 29 MPNYVKFLKDILTKKRRLGEFETVALTEGCSAMLKSKIPPKLKDPGSFTIPCSIGGRDVG 88
Query: 61 CALCDLGASINLMPLSIFKKVGIGE-----------------PEGKIEDVLVKVDKFLFS 120
ALCDLGASINLMP+SIFKK+GIGE PEGKIEDVLV+VDKF+F
Sbjct: 89 RALCDLGASINLMPMSIFKKLGIGEARPTTVTLQLADRSMAHPEGKIEDVLVQVDKFIFP 148
Query: 121 EDFVILDYKADRKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDV 170
DF+ILDY+ADR VPIILGRPFL+T TLI V GELTM ND+++ FNV M+FP ++
Sbjct: 149 ADFIILDYEADRDVPIILGRPFLATGRTLIDVQNGELTMRVNDQKVTFNVFNAMRFPDEI 208
BLAST of Pay0003385 vs. NCBI nr
Match:
XP_030478287.1 (uncharacterized protein LOC115695357 [Cannabis sativa])
HSP 1 Score: 215.3 bits (547), Expect = 4.5e-52
Identity = 109/186 (58.60%), Postives = 134/186 (72.04%), Query Frame = 0
Query: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
M +Y+KFLKDIL KKR++ +FETVALT+ + K+ +P K+ DP SFT+ S GG D+G
Sbjct: 50 MPNYVKFLKDILTKKRRLGEFETVALTEGCSAMLKSKIPPKLKDPGSFTIPCSIGGRDVG 109
Query: 61 CALCDLGASINLMPLSIFKKVGIGE-----------------PEGKIEDVLVKVDKFLFS 120
ALCDLGASINLMP+SIFKK+GIGE PEGKIEDVLV+VDKF+F
Sbjct: 110 RALCDLGASINLMPMSIFKKLGIGEARPTTVTLQLADRSMAHPEGKIEDVLVQVDKFIFP 169
Query: 121 EDFVILDYKADRKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDV 170
DF+ILDY+ADR VPIILGRPFL+T TLI V GELTM ND+++ FNV M+FP ++
Sbjct: 170 ADFIILDYEADRDVPIILGRPFLATGRTLIDVQNGELTMRVNDQKVTFNVFNAMRFPDEI 229
BLAST of Pay0003385 vs. NCBI nr
Match:
XP_008447648.1 (PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo])
HSP 1 Score: 214.2 bits (544), Expect = 1.0e-51
Identity = 118/188 (62.77%), Postives = 136/188 (72.34%), Query Frame = 0
Query: 1 MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60
M SY KFL DILAKKR+INDF+T+AL QAT+D +KNGV EKMT P SF V S GMDLG
Sbjct: 1 MPSYAKFLTDILAKKRRINDFQTMALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLG 60
Query: 61 CALCDLGASINLMPLSIFKKVGIGE-----------------PEGKIEDVLVKVDKFLFS 120
LCDLGASINLMPLSIFKK+ I E P+GKIEDVLVKVDKFLF
Sbjct: 61 HVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFF 120
Query: 121 EDFVILDYKADRKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKPMKFPSDV 172
DF+ILDY+AD +V IIL R FLST L +HQGELT+ FN++EIKFNV+ MKFP D
Sbjct: 121 ADFIILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFFNNKEIKFNVINAMKFPLDD 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DPZ2 | 2.1e-100 | 98.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CA15 | 9.7e-61 | 68.11 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BHX3 | 4.8e-52 | 62.77 | uncharacterized protein LOC103490055 OS=Cucumis melo OX=3656 GN=LOC103490055 PE=... | [more] |
A0A5D3BDT2 | 2.4e-51 | 62.57 | RT_RNaseH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A5A7VJ95 | 3.5e-50 | 62.57 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0035429.1 | 4.4e-100 | 98.94 | uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa] >TYK2... | [more] |
KAA0065469.1 | 2.0e-60 | 68.11 | uncharacterized protein E6C27_scaffold17G001650 [Cucumis melo var. makuwa] >TYK0... | [more] |
XP_030477929.1 | 4.5e-52 | 58.60 | uncharacterized protein LOC115694963 [Cannabis sativa] | [more] |
XP_030478287.1 | 4.5e-52 | 58.60 | uncharacterized protein LOC115695357 [Cannabis sativa] | [more] |
XP_008447648.1 | 1.0e-51 | 62.77 | PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |