Pay0003368 (gene) Melon (Payzawat) v1

Overview
NamePay0003368
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr02: 21620303 .. 21621844 (-)
RNA-Seq ExpressionPay0003368
SyntenyPay0003368
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

mRNA sequence

ATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Coding sequence (CDS)

ATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Protein sequence

MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGSISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Homology
[Close]
BLAST of Pay0003368 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.7e-58
Identity = 127/296 (42.91%), Postives = 169/296 (57.09%), Query Frame = 0 

Query: 57   LGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVR 116
            L + F +KD   L+YFLG+E     +G +LSQ +Y  DLL R+ +  +   +TP+ P+ +
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 117  LTPFDGVPLEDPTLYRQLVGSLIYLT---------------FMAAPRTIHFTAVLRILRY 176
            L+ + G  L DPT YR +VGSL YL                FM  P   H  A+ RILRY
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 177  IKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVS 236
            + GT  HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V 
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVV 1350

Query: 237  RSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKH 296
            RSSTE+EYR++A+ +SE+ W+  LLT++G   T P +++CDN  A  +  N VFH R KH
Sbjct: 1351 RSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKH 1410

Query: 297  IENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 338
            I  D HF+R+ +QS  L +  +ST DQ AD  TK L    F     K+ V    PS
Sbjct: 1411 IAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTRVPPS 1466

[Close]
BLAST of Pay0003368 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.0e-57
Identity = 125/296 (42.23%), Postives = 169/296 (57.09%), Query Frame = 0 

Query: 57   LGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVR 116
            L + F +K+  +L+YFLG+E      G +LSQ +Y  DLL R+ +  +   +TP+  + +
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 117  LTPFDGVPLEDPTLYRQLVGSLIYLTF---------------MAAPRTIHFTAVLRILRY 176
            LT   G  L DPT YR +VGSL YL F               M  P   H+ A+ R+LRY
Sbjct: 1214 LTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRY 1273

Query: 177  IKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVS 236
            + GT  HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V 
Sbjct: 1274 LAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVV 1333

Query: 237  RSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKH 296
            RSSTE+EYR++A+ +SEL W+  LLT++G   + P +++CDN  A  +  N VFH R KH
Sbjct: 1334 RSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKH 1393

Query: 297  IENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 338
            I  D HF+R+ +QS  L +  +ST DQ AD  TK L    F     K+ V+   PS
Sbjct: 1394 IALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1449

[Close]
BLAST of Pay0003368 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 172.9 bits (437), Expect = 6.0e-42
Identity = 105/299 (35.12%), Postives = 159/299 (53.18%), Query Frame = 0 

Query: 50   ISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFST 109
            +++ + YL + F M DL  + +F+G+ I       YLSQ+ Y   +L++  + +    ST
Sbjct: 1101 MNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVST 1160

Query: 110  PLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTFMAAPRTIHFTAVL------------- 169
            PL   +     +    +  T  R L+G L+Y+     P       +L             
Sbjct: 1161 PLPSKINYELLNS-DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 1220

Query: 170  ---RILRYIKGTLGHGLQFSSQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLGD-ALI 229
               R+LRY+KGT+   L F    +    + G+ D+DWAG   DR+STTGY F + D  LI
Sbjct: 1221 NLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLI 1280

Query: 230  SWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIA 289
             W +K+Q+ V+ SSTE+EY AL +A  E +WL++LLT +     +P  ++ DN   I IA
Sbjct: 1281 CWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIA 1340

Query: 290  HNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKL 330
            +N   H+R KHI+   HF R  +Q+N + L+ I T +Q ADIFTK L + RF +L  KL
Sbjct: 1341 NNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKL 1398

[Close]
BLAST of Pay0003368 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.3e-40
Identity = 108/302 (35.76%), Postives = 161/302 (53.31%), Query Frame = 0 

Query: 45   KPIGSISDLQCYLGKHFEMKDLGNLNYFLGLEI--SSSSSGYYLSQAKYASDLLNRSGIT 104
            K  G I+ L+  L K F+MKDLG     LG++I    +S   +LSQ KY   +L R  + 
Sbjct: 1017 KDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMK 1076

Query: 105  DSATFSTPLDPNVRL------TPFDGVPLEDPTLYRQLVGSLIYL--------------- 164
            ++   STPL  +++L      T  +         Y   VGSL+Y                
Sbjct: 1077 NAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVV 1136

Query: 165  -TFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTG 224
              F+  P   H+ AV  ILRY++GT G  L F   S  +L G++DAD AGD  +R+S+TG
Sbjct: 1137 SRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTG 1196

Query: 225  YCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILH 284
            Y F      ISW+SK Q  V+ S+TE+EY A  +   E+IWL+  L ++G  Q    +++
Sbjct: 1197 YLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQ-KEYVVY 1256

Query: 285  CDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSP 323
            CD+ SAI ++ N ++H RTKHI+   H++R  +   +L +  IST + PAD+ TK +   
Sbjct: 1257 CDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRN 1316

[Close]
BLAST of Pay0003368 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-38
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 0 

Query: 57  LGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVR 116
           L   F MKDLG ++YFLG++I +  SG +LSQ KYA  +LN +G+ D    STPL P   
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPL-PLKL 86

Query: 117 LTPFDGVPLEDPTLYRQLVGSLIYLTF---------------MAAPRTIHFTAVLRILRY 176
            +        DP+ +R +VG+L YLT                M  P    F  + R+LRY
Sbjct: 87  NSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 146

Query: 177 IKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVS 236
           +KGT+ HGL     S L +  F D+DWAG  + RRSTTG+C +LG  +ISW +K+Q  VS
Sbjct: 147 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 206

Query: 237 RSSTESEYRALADATSELIW 242
           RSSTE+EYRALA   +EL W
Sbjct: 207 RSSTETEYRALALTAAELTW 225

[Close]
BLAST of Pay0003368 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.6e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 834  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 893

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 894  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 953

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 954  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 1013

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 1014 ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 1073

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 1074 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1133

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1134 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1193

[Close]
BLAST of Pay0003368 vs. ExPASy TrEMBL
Match: A0A5D3DWU7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00160 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.6e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1   MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
           MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 250 MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 309

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 310 GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 369

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 370 NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 429

Query: 181 -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                        +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 430 ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 489

Query: 241 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
           SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 490 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 549

Query: 301 YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
           YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 550 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 609

[Close]
BLAST of Pay0003368 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.6e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 834  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 893

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 894  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 953

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 954  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 1013

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 1014 ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 1073

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 1074 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1133

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1134 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1193

[Close]
BLAST of Pay0003368 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.6e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 802  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 861

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 862  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 921

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 922  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 981

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 982  ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 1041

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 1042 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1101

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1102 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1161

[Close]
BLAST of Pay0003368 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 6.2e-167
Identity = 331/513 (64.52%), Postives = 333/513 (64.91%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQAL KTHTWDYVDLPPGKKPIG            
Sbjct: 751  MSLVEPSSYKEASTNPLWQQAMDNELQALDKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 810

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 811  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 870

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 871  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 930

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYF+GLEISS
Sbjct: 931  ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFIGLEISS 990

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 991  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1050

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1051 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1110

[Close]
BLAST of Pay0003368 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 607.1 bits (1564), Expect = 9.5e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 834  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 893

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 894  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 953

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 954  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 1013

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 1014 ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 1073

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 1074 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1133

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1134 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1193

[Close]
BLAST of Pay0003368 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 607.1 bits (1564), Expect = 9.5e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 802  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 861

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 862  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 921

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 922  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 981

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 982  ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 1041

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 1042 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1101

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1102 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1161

[Close]
BLAST of Pay0003368 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 607.1 bits (1564), Expect = 9.5e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 834  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 893

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 894  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 953

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 954  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 1013

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 1014 ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 1073

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 1074 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1133

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1134 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1193

[Close]
BLAST of Pay0003368 vs. NCBI nr
Match: TYK12316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK28111.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 607.1 bits (1564), Expect = 9.5e-170
Identity = 336/513 (65.50%), Postives = 337/513 (65.69%), Query Frame = 0 

Query: 1   MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
           MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG            
Sbjct: 250 MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 309

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 310 GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 369

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 370 NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 429

Query: 181 -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                        +ISDLQCYLGKHFEMKDLGNLNYFLGLEISS
Sbjct: 430 ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISS 489

Query: 241 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
           SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 490 SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 549

Query: 301 YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
           YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 550 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 609

[Close]
BLAST of Pay0003368 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 596.7 bits (1537), Expect = 1.3e-166
Identity = 331/513 (64.52%), Postives = 333/513 (64.91%), Query Frame = 0 

Query: 1    MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG------------ 60
            MSLVEPSSYKEASTNPLWQQAMDNELQAL KTHTWDYVDLPPGKKPIG            
Sbjct: 751  MSLVEPSSYKEASTNPLWQQAMDNELQALDKTHTWDYVDLPPGKKPIGCKWIFKIKTHSD 810

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 811  GSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFL 870

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 871  NGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDS 930

Query: 181  -----------------------------SISDLQCYLGKHFEMKDLGNLNYFLGLEISS 240
                                         +ISDLQCYLGKHFEMKDLGNLNYF+GLEISS
Sbjct: 931  ALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFIGLEISS 990

Query: 241  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 300
            SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Sbjct: 991  SSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI 1050

Query: 301  YLT---------------FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 338
            YLT               FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS
Sbjct: 1051 YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFS 1110

[Close]
BLAST of Pay0003368 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-61
Identity = 123/257 (47.86%), Postives = 164/257 (63.81%), Query Frame = 0 

Query: 49  SISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFS 108
           ++ +L+  L   F+++DLG L YFLGLEI+ S++G  + Q KYA DLL+ +G+      S
Sbjct: 296 AVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSS 355

Query: 109 TPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYL---------------TFMAAPRTIHFT 168
            P+DP+V  +   G    D   YR+L+G L+YL                F  APR  H  
Sbjct: 356 VPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQ 415

Query: 169 AVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWR 228
           AV++IL YIKGT+G GL +SSQ+ + L  FSDA +      RRST GYC +LG +LISW+
Sbjct: 416 AVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWK 475

Query: 229 SKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHND 288
           SKKQ VVS+SS E+EYRAL+ AT E++WL     ++  P + PT+L CDN +AI IA N 
Sbjct: 476 SKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNA 535

Query: 289 VFHERTKHIENDCHFVR 291
           VFHERTKHIE+DCH VR
Sbjct: 536 VFHERTKHIESDCHSVR 552


HSP 2 Score: 55.1 bits (131), Expect = 1.3e-07
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0 

Query: 5   EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIG 49
           EPS+Y EA    +W  AMD+E+ A+  THTW+   LPP KKPIG
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIG 128

[Close]
BLAST of Pay0003368 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-39
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 0 

Query: 57  LGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVR 116
           L   F MKDLG ++YFLG++I +  SG +LSQ KYA  +LN +G+ D    STPL P   
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPL-PLKL 86

Query: 117 LTPFDGVPLEDPTLYRQLVGSLIYLTF---------------MAAPRTIHFTAVLRILRY 176
            +        DP+ +R +VG+L YLT                M  P    F  + R+LRY
Sbjct: 87  NSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 146

Query: 177 IKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVS 236
           +KGT+ HGL     S L +  F D+DWAG  + RRSTTG+C +LG  +ISW +K+Q  VS
Sbjct: 147 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 206

Query: 237 RSSTESEYRALADATSELIW 242
           RSSTE+EYRALA   +EL W
Sbjct: 207 RSSTETEYRALALTAAELTW 225

[Close]
BLAST of Pay0003368 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-11
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 143 FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYC 202
           F +A RT    AV ++L Y+KGT+G GL +S+ S L L  F+D+DWA  P  RRS TG+C
Sbjct: 20  FSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:
BLAST of Pay0003368 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94HW22.7e-5842.91Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT943.0e-5742.23Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041466.0e-4235.12Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109784.3e-4035.76Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P925193.1e-3844.50Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Pay0003368 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DG184.6e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3DWU74.6e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SZ664.6e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7VDW04.6e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UVX46.2e-16764.52Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
BLAST of Pay0003368 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0043149.19.5e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0065380.19.5e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0036574.19.5e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK12316.19.5e-17065.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0058316.11.3e-16664.52Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
BLAST of Pay0003368 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.11.2e-6147.86cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.12.2e-3944.50DNA/RNA polymerases superfamily protein [more]
ATMG00240.12.5e-1150.00Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 47..111
e-value: 9.9E-11
score: 41.7
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 196..332
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 196..332
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 182..320
e-value: 1.17258E-85
score: 252.774
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 60..288

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0003368.1Pay0003368.1mRNA