Pay0003302 (gene) Melon (Payzawat) v1

Overview


Name	Pay0003302
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RGG repeats nuclear RNA binding protein A-like
Location	chr11: 30975259 .. 30979831 (-)
RNA-Seq Expression	Pay0003302
Synteny	Pay0003302

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATTAAAACTATTGATAAAAATAAACGCAAATAAATAAATTGAAGAATTTAGGTCAGTCGACTTCTTTTGCTCTTACTCACATCAGTCACTCCCATTGCGGCTAGGGTTTTTCCCTTTTGTTCCTCTTCCATTTTTATATTTTTTCTTTTTTCAATTTTATTTCTACAAATCTCTTCATTCTTTCTTTTATCATAGTTTCATGGAGCTCTTGTTTAGATAGGTTTTGTTGATCTCCTTTTTTGTTAGCTCTTTTTTGGGGTTTTTGGTTTCGAGATTGTTTCCAAATGGCGACCCTTAATCCTTTTGATTTGTTGGGGGATGATGATGCTGAGGACCCATCTCAGCTAATTGCGGCTAAGGTGGCGGCGGTGGCGACGGCCCCGCTGTCTAAGAAAGGCCCTGCTCAGACCAAACCCCTGCCTTCTGGGGCTCAACAGAATAAGCCTGCTAGTCTTCCTTCCAAACCTCTGCCACCTGCTCAGGCTGGTAAGATTATTCATTTCTGAATTTTTGGTTTCATTTTGAATATTGATGTTTTTTTTTAAAAAAAAAATTATATAGCTTTGGTCGATTGATTTTACATTTTTCAGATAATGGTTATTGTTTCGGTTTTAGCTGTTTGTTTTTATGATTTGATTCTACGCAAGTTGGTAACTGTTTTTAATTTGGTTGGAGTGTTGAAAATTACTTTTTTTTTCCTCAAAAGATTTGTGGGATGTAATAGTTGGCTTCGTTTTATTGTGTGTATGGCAGTTGAATTTTGTTTGTAACTCTGATAATACCCAATGAGTTGTTTGTTTTGGTACTGTGATTGGAGGATTAACGAATTGAAAGTATCAATACCATTTCTTTTGGCTGAAATCTGATGTCTGCAATGCAGTTGTGAATAAATGAATTTTATTTTAACGTTTCAAGGATTAAATAAAATTTTGTTTTCTTACTATGGTATGTTGTTTTTCTTTACGTTGATTATTAATAATCATCTATTGATAGCAGTTGAACTTATGATTGTTTAGCGATTTGGGGTCTTTTTTGGGAACTTTAGACGGTGCAAACAATTCGTCATTATCATACCAGTCTTCTTTTTTTTGTCATTTTTTCATCCTATTATAATTTACGGACCTACTATTGTTTAACCATCAAACTTTTTTGAGTGTCCACTGGAATGAATTATTCATTAAGTGATTAAGACAATCTTTTTCTTACTTTGAGTAGTAAGAGAATCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGACGGGGATATGGTTATGGGCGAGGTCGCGAGGGTGGTGGGTTTAATCGAGACTCTGCCAACAGTGAGAACATTAATGCACCTGAAGATGGAGTGGGTGGTAAGACAACTGAAAGACGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGGGGTGGTTTCAATGATGGAGAAAATGCTGAAGGGGAACGCCCTCGTAGAGCATTTGAACGCCACAGTGGAACTGGCCGTGGGTAAGTGTCTGCTGTCTGTTCTTTTAAATTTTGTTGTGCACACTCCTGCTGCATATTCTACGCCATTTTGACACTTCATTCCTGATTTTATGCCTAGAAATGAATTTAAACGAGAAGGGTCTGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGTAAGTACATGTGTATACCTTCAATCTTCATGGATGTCTTTTTCGAGGTACTCTGTGCAATTGTGCATACATGAGCCTTCTTCTCAATCCTTCTCATAGAAGCTGCCAGGTTGGCTTGAAAGACTAATTTCTATAGTCAGGAATGCCTTTCTCAATATGTGGAAGATGCTTTCAACCACAACATATACAGGGAGCTTGGCTAACCTCATTTTTCTTTTGAGGGAGGGGGTTACATTTTTATGCTCATGTTATTATCACTTGTGTGCTAATAAGATTTTTTTCTCCTTGACAACTAGTTATACCTAAAATTTCTGTTTTATATTTAGGGTAGCAGAGGAAACCGTTAATGAAACTGAAAAGAATGTGGGTGACGAGAAGCCTATTCAAGAGAATGATACATCAGGGGCGAACACAGATAACCCTGCTAAAGAACCAGAGGAAACCGAACCAGAAGACAAGGTTAGTATCTTCAGATTTTAGTAAACTTCCCTTAAATGTGGGACCTACTATCTCACTTGTCTTTGATATTCTTCTGGCTGAAAAAGCAACTTGTAATTTTGCTTGCATGTCAAGTTGAACGGGATTTATTACTTCACTTCTACTAGCATAAATTTGATACGTGTAACAGGTGTAATTTTGAATGCATATATCAGTCTGGTGGGCTTGGTTTGCAAAATTTATTGTACTGTTTGACTTGATTTTGAATCTAACGTCTTCTTTTTTCCTTCCAATGTAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGAAAGTCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATATTTATTAAATTGGTACACCTACTCAGCACTCTTTTGCTGTTGATCTATGCCCTTTGGGATGTGATGACCCTGGGCGTTACATTAAATGAGGACTTGGCAGTTTCATCTCATTTGTTACCTCACTTGTAGGGATCTGAAAAGGATAAGCGAAAAGAAATTGCAGATAAAGAGGAGAGAACTAAGAAGGTATTATTATCTCATCTTCTTTAAATATTTCTGCCTTTTAAATTGTTTACTCGGTTGTTACACTACGCCTGGCAAAATTTTAGAAGTCTTAGGGCTGCCACCAGCTTTTGTTTTCCATAGTGAGGCAAGTGCAAGTCTCTAGCCATAAATCTCATTATGAACATAAAAATTAAATTAATGCATAATATAACACATAGTAAAAGATAAAATGAAAAATCTCAATTTCCGATCAATATACATTAGTTTTCATGAGTTATTATTCATCTAAGATCATTCTCATAATGGAGAAACAAAACTGGAAAGACTGAAATTTTGTCTTGCCCCAAGAAGATGAGAAAAAATGCGACTCCAGACCCTACGAGCTATATTTTTTTCCAAAGTTGTTTTGATGAATTAAATGAACAAAGAAAAAGAGAAAAAATGAAATAGTAAACGGGGAAAAGGAAATAAAAAAATCGAGAGAAAGAACAGACCTTTTAGGTTTTTGTCTCGTCTCTTACCGCCACCTTTCCCACCTACAATGGAAAACAAAATTATGGTTGTCTTTTAGTATGTCCTGTTACTTTTCAGGCATAAATTATTGAGTTTTCTACTTCAGATAATGTGCAAGTTGTTTGTTTTATGTGTCAAATAAATGTTTTGTCTTTTCGGCACTCATCCCATTAAACAGACCCCAACCTGACACTAGTACTACTTAATATTTTCTCTAAAGTCAATTGTGTATGAGGCAGATGCTTTCTACGTTTCAATAGTGTAACCATGGAGGAACGTGCCTCTTGTTCAACATAAATAAAAGCCACTTCTTCTGTTCCAACCAGTCTAACTTTAGAAACCTTCTTTCCTTGATGCTTGAGCCTTATATTTTGAAAATGTTGATGTCCTGCCAGCACATAGGATGCTCTTTATTGGGTTTATTCCGAACATACCTATTTAATTGAATTACTTTTTGTTTAAGAATATTATATCATGTGGTTGAGGTTTCTAAAGTTAGAGATGACGGCTTACTTTGTGAGCCTATGCTGAGGTTGACCGGAAGAAATTGAATATGATAATATTACTCAATATTTAGAACCATTATTAGAGGAAAATAAGGTTATTATAAATTGTGCTTTGTTGAATTTTATTTGGCCTGTATCTTCCAATTTTCTTCATCTTCATAAATGATTGCAATGAAATCATCTTTCAATTTAATTACCGCAGACATCTAAAGAATGAATTTAATGCGTTAAAGTACTATTTATTCCAAATGATAGAATTTGCTTCCAAATACATTTTTATACAAAGCTTTGGTTCTAACTTCTAATTAGGCCCATATCAGCATACAGGAGTTTTTATTTTGCTTTCCATGCAACATTGTGTTGGCCCTTCTAGATCCTGTAAAAAGGTTAAAGGACTGATGTTTTTCTTCTTCATTTGTTAGTCTTTGAGTATTAATGAGTTCTTGAGGCCCGCGGAAGGAGAGCGTCACTACACCCCTGGTGGCCGAGGAAGGGGTCGTGGACGTGGTTCAAGGGGAGGATACAGTGGCAGCTCGATGAGCAATATTGCAGCCCCATCCATTGAAGACCCTGGGCAGTTCCCAACCTTAGGTGCGAAGTAAATTTCGCAAATAAATTTTCCCTTACTAAACTGTGTTTTTGATCTGGGGCAGGAAATTGACTAGAATAATATAGTCTCTCCTGTATCAAAATGATTTTTAAGTTTAATTTGTTTAGGTGTAAATTGTCAAAGTCCTTGTATTTTCCCTTCTCCATTTTTCTTTGTGTGTTTTCAACTGTTGTTTCAAGACTGTTTGCCAGATCAAACTGTTTATTTATGAACTTCCTTTTTCCCC

mRNA sequence

TGTATTAAAACTATTGATAAAAATAAACGCAAATAAATAAATTGAAGAATTTAGGTCAGTCGACTTCTTTTGCTCTTACTCACATCAGTCACTCCCATTGCGGCTAGGGTTTTTCCCTTTTGTTCCTCTTCCATTTTTATATTTTTTCTTTTTTCAATTTTATTTCTACAAATCTCTTCATTCTTTCTTTTATCATAGTTTCATGGAGCTCTTGTTTAGATAGGTTTTGTTGATCTCCTTTTTTGTTAGCTCTTTTTTGGGGTTTTTGGTTTCGAGATTGTTTCCAAATGGCGACCCTTAATCCTTTTGATTTGTTGGGGGATGATGATGCTGAGGACCCATCTCAGCTAATTGCGGCTAAGGTGGCGGCGGTGGCGACGGCCCCGCTGTCTAAGAAAGGCCCTGCTCAGACCAAACCCCTGCCTTCTGGGGCTCAACAGAATAAGCCTGCTAGTCTTCCTTCCAAACCTCTGCCACCTGCTCAGGCTGTAAGAGAATCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGACGGGGATATGGTTATGGGCGAGGTCGCGAGGGTGGTGGGTTTAATCGAGACTCTGCCAACAGTGAGAACATTAATGCACCTGAAGATGGAGTGGGTGGTAAGACAACTGAAAGACGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGGGGTGGTTTCAATGATGGAGAAAATGCTGAAGGGGAACGCCCTCGTAGAGCATTTGAACGCCACAGTGGAACTGGCCGTGGAAATGAATTTAAACGAGAAGGGTCTGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGGTAGCAGAGGAAACCGTTAATGAAACTGAAAAGAATGTGGGTGACGAGAAGCCTATTCAAGAGAATGATACATCAGGGGCGAACACAGATAACCCTGCTAAAGAACCAGAGGAAACCGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGAAAGTCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATATTTATTAAATTGGGATCTGAAAAGGATAAGCGAAAAGAAATTGCAGATAAAGAGGAGAGAACTAAGAAGTCTTTGAGTATTAATGAGTTCTTGAGGCCCGCGGAAGGAGAGCGTCACTACACCCCTGGTGGCCGAGGAAGGGGTCGTGGACGTGGTTCAAGGGGAGGATACAGTGGCAGCTCGATGAGCAATATTGCAGCCCCATCCATTGAAGACCCTGGGCAGTTCCCAACCTTAGGTGCGAAGTAAATTTCGCAAATAAATTTTCCCTTACTAAACTGTGTTTTTGATCTGGGGCAGGAAATTGACTAGAATAATATAGTCTCTCCTGTATCAAAATGATTTTTAAGTTTAATTTGTTTAGGTGTAAATTGTCAAAGTCCTTGTATTTTCCCTTCTCCATTTTTCTTTGTGTGTTTTCAACTGTTGTTTCAAGACTGTTTGCCAGATCAAACTGTTTATTTATGAACTTCCTTTTTCCCC

Coding sequence (CDS)

ATGGCGACCCTTAATCCTTTTGATTTGTTGGGGGATGATGATGCTGAGGACCCATCTCAGCTAATTGCGGCTAAGGTGGCGGCGGTGGCGACGGCCCCGCTGTCTAAGAAAGGCCCTGCTCAGACCAAACCCCTGCCTTCTGGGGCTCAACAGAATAAGCCTGCTAGTCTTCCTTCCAAACCTCTGCCACCTGCTCAGGCTGTAAGAGAATCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGACGGGGATATGGTTATGGGCGAGGTCGCGAGGGTGGTGGGTTTAATCGAGACTCTGCCAACAGTGAGAACATTAATGCACCTGAAGATGGAGTGGGTGGTAAGACAACTGAAAGACGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGGGGTGGTTTCAATGATGGAGAAAATGCTGAAGGGGAACGCCCTCGTAGAGCATTTGAACGCCACAGTGGAACTGGCCGTGGAAATGAATTTAAACGAGAAGGGTCTGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGGTAGCAGAGGAAACCGTTAATGAAACTGAAAAGAATGTGGGTGACGAGAAGCCTATTCAAGAGAATGATACATCAGGGGCGAACACAGATAACCCTGCTAAAGAACCAGAGGAAACCGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGAAAGTCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATATTTATTAAATTGGGATCTGAAAAGGATAAGCGAAAAGAAATTGCAGATAAAGAGGAGAGAACTAAGAAGTCTTTGAGTATTAATGAGTTCTTGAGGCCCGCGGAAGGAGAGCGTCACTACACCCCTGGTGGCCGAGGAAGGGGTCGTGGACGTGGTTCAAGGGGAGGATACAGTGGCAGCTCGATGAGCAATATTGCAGCCCCATCCATTGAAGACCCTGGGCAGTTCCCAACCTTAGGTGCGAAGTAA

Protein sequence

MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSKPLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGGKTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGRSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGAK

Homology

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BLAST of Pay0003302 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 7.0e-73
Identity = 211/381 (55.38%), Postives = 250/381 (65.62%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSK-KGPAQTKPLPSGAQQNKPASLPS 60
           MATLNPFDLL DDDAEDPSQL      AVA   + K K   Q   LP+         LPS
Sbjct: 1   MATLNPFDLL-DDDAEDPSQL------AVAIEKIDKSKKSGQVSSLPA----KSAPKLPS 60

Query: 61  KPLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSAN---SENINAP-- 120
           KPLPPAQAVRE+R++  RG      GGGRG G+ RGR  GG+NRD  N   S     P  
Sbjct: 61  KPLPPAQAVREARSDAPRG------GGGRG-GFNRGR--GGYNRDDGNNGYSGGYTKPSG 120

Query: 121 EDGVGGKTTERRGYGG-PRGR---------GGRRGGFNDGENAEGERPRRAFERHSGTGR 180
           E  V   + ERRG GG PRG          GGRRGGF++ E  +GERPRRAFER SGTGR
Sbjct: 121 EGDVSKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGR 180

Query: 181 GNEFKREGSGRGNWGRSTDEFAEVAEETVN-ETEKNVGDEKPIQENDTSGANTDNPAKEP 240
           G++FKR+GSGRGNWG   +E A   E     ETEK+VG EKP  ++  + AN ++     
Sbjct: 181 GSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--V 240

Query: 241 EETEPEDKEMTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKL 300
           EE EPEDKEMTL+EYEK+LE+K+K+L +L T ERKVD K F SMQQLS+KK N++IFIKL
Sbjct: 241 EEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKL 300

Query: 301 GSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMS- 360
           GS+KDKRK+  DKEE+ KK++SINEFL+PAEG  +Y  G  GRGRG   RGG S      
Sbjct: 301 GSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGG 355

Query: 361 --NIAAPSIEDPGQFPTLGAK 362
             N AAP+I D  QFP+LG K
Sbjct: 361 YRNEAAPAIGDAAQFPSLGGK 355

[Close]

BLAST of Pay0003302 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.3e-68
Identity = 182/304 (59.87%), Postives = 215/304 (70.72%), Query Frame = 0


Query: 78  GGRGSGRGGGRGYGYGRGREGGGFNRDSANSEN-----------INAPEDGVGGKTTERR 137
           GGRG  RGGGRG G GRGR   GFN++SA+ EN               EDG  GK +ERR
Sbjct: 3   GGRGGPRGGGRGRGPGRGR---GFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERR 62

Query: 138 -GYGGPRG--RGGRRGGFNDGENA--EGERPRRAFERHSGTGRGNEF-KREGSGRGNWGR 197
            GYGGPRG   GGRRGGFN+G+ A  EGERPRR F+R SGTGRGNE+ KREGSGRGNWG 
Sbjct: 63  GGYGGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGT 122

Query: 198 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 257
             D+ A+  E  VN+ EK V  EK   + +    N D+ A EPEE EPE+KEMTLEEYEK
Sbjct: 123 PADDIAQETEVPVNDGEKIVEAEKEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEK 182

Query: 258 LLEDKRKSLLALKTEERKVD-PKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEER 317
           L+E+KRK+LLALK EERKV+  KE  SMQ LS+KK++++IFIKLGSEK+KRKE  +K  +
Sbjct: 183 LMEEKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAVEKARK 242

Query: 318 TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSN--IAAPSIEDPGQFPT 362
           T+   SINEFL+PAEGE +   GGRGRG GRG RGG+ G    N   +APSIED GQFP+
Sbjct: 243 TQ---SINEFLKPAEGENYSRRGGRGRGPGRG-RGGFGGGVGGNKSFSAPSIEDVGQFPS 299

[Close]

BLAST of Pay0003302 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.0e-64
Identity = 190/386 (49.22%), Postives = 242/386 (62.69%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MA++NPFDLL DDDAEDPSQ++A+K       PL    P QT          K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTA---------KSGKMPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           P PP+QAVRE+RN       G GRG GRG  YGRG  GG  NRDS N++   A E+G GG
Sbjct: 61  PPPPSQAVREARN-----APGGGRGAGRGGSYGRGGRGGN-NRDSRNNDG-PANENGYGG 120

Query: 121 ---KTTERRG--YGGPRG--RGGRRGGF-NDGENAEGERPRRAFERHSGTGRGNEFKREG 180
              ++ E  G   GGP G  RG RRG + N G++ + ERPR+ ++RHS T  GNE KR+G
Sbjct: 121 GYRRSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDG 180

Query: 181 SGRGNWGRSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKE 240
           +GR NWG + D+   V EE+    +KN+  EK   E + + A  + PA++ EE +PEDKE
Sbjct: 181 AGRANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKE 240

Query: 241 MTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNND-IFIKLGSEKDKRK 300
           MTLEEYEK+LE+K+K+L A K EERKVD K F +MQQLSSKK NND +FIKLG+EKDKR 
Sbjct: 241 MTLEEYEKVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR- 300

Query: 301 EIADKEERTKKSLSINEFLRPAEGERHYTP-----GGR-------------GRGRGRGSR 360
            I ++EE+T+KSLSINEFL+PA+G+ +Y P     GGR             GR    G R
Sbjct: 301 -ITEREEKTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGR 359

[Close]

BLAST of Pay0003302 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-57
Identity = 187/378 (49.47%), Postives = 235/378 (62.17%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MA+LNPFDLLG DDAEDPSQL      AVA +   +K  A  +P        K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQL------AVALSQKVEKAAAAVQP-------PKAAKFPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSE---NINAPEDG 120
           P PP+QAVRESRN   +GGRG    GGRG G+ RGR  GG+NRD+ N++   N N    G
Sbjct: 61  PAPPSQAVRESRN-APQGGRGG--TGGRG-GFSRGRGNGGYNRDNRNNDAPGNENGFSGG 120

Query: 121 VGGKTTERRG------YGGPRGRGG----RRGGFNDGENAEGERPRRAFERHSGTGRGNE 180
               + +  G       GG R  GG    RRGG  +GE+ + ERP R ++RHS TG G  
Sbjct: 121 YRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTG 180

Query: 181 FKREGSGRGNWGRSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETE 240
            KR G GRGNWG + D+    +EE   E EK+   EK   E++T  A  +  A+E  + E
Sbjct: 181 MKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKE 240

Query: 241 PED---KEMTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKD-NNDIFIKL 300
            E+   +EMTLEEYEK+LE+K+K+L A K EERKVD K F SMQQLS+KK+ + +IFIKL
Sbjct: 241 AEEAEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKL 300

Query: 301 GSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGR-GRGSRG-GYSGSSM 360
           GS+K+KRK   D  E+ KKSLSINEFL+PA+G+R+   GG  RGR GRG RG G +    
Sbjct: 301 GSDKEKRK---DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYA 357

[Close]

BLAST of Pay0003302 vs. ExPASy TrEMBL
Match: A0A1S3CBH1 (H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103498821 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.9e-185
Identity = 358/361 (99.17%), Postives = 360/361 (99.72%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTD+PAKEPEETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT
Sbjct: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGA 360
           KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSN+AAPSIEDPGQFP LGA
Sbjct: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPILGA 360

Query: 361 K 362
           K
Sbjct: 361 K 361

[Close]

BLAST of Pay0003302 vs. ExPASy TrEMBL
Match: A0A5A7TA33 (H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002670 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.6e-184
Identity = 358/362 (98.90%), Postives = 360/362 (99.45%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQA-VRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVG 120
           PLPPAQA VRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVG
Sbjct: 61  PLPPAQAVVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVG 120

Query: 121 GKTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG 180
           GKTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG
Sbjct: 121 GKTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG 180

Query: 181 RSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYE 240
           RSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTD+PAKEPEETEPEDKEMTLEEYE
Sbjct: 181 RSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYE 240

Query: 241 KLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEER 300
           KLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEER
Sbjct: 241 KLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEER 300

Query: 301 TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLG 360
           TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSN+AAPSIEDPGQFP LG
Sbjct: 301 TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPILG 360

Query: 361 AK 362
           AK
Sbjct: 361 AK 362

[Close]

BLAST of Pay0003302 vs. ExPASy TrEMBL
Match: A0A0A0K9Z4 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G106180 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 4.1e-177
Identity = 342/361 (94.74%), Postives = 351/361 (97.23%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           M TLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKK PAQTKPLPSGAQ NKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDS N+ENINAPEDGVGG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KT+ERRGYGGPRGRGGRRGGFNDGE AEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEVA ETVNETEKNVGDEKPIQE+DTSG NT+NPAKEP+ETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRK+LLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGA 360
           KKSLSINEFLRPA+GERHY PGGRGRGRGRGSRGGYSGS MSN+AAPSI DPGQFPTLGA
Sbjct: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA 360

Query: 361 K 362
           K
Sbjct: 361 K 361

[Close]

BLAST of Pay0003302 vs. ExPASy TrEMBL
Match: A0A6J1EYL1 (RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439720 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 8.4e-162
Identity = 318/361 (88.09%), Postives = 335/361 (92.80%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQLIAAK  A  TAP  KKG AQTKP+ S +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPP+QAVRE+RNEGSRGGRGSGRGGGR  GYGRGREGGGFNRD ANSEN +APEDG  G
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGR--GYGRGREGGGFNRDFANSENTSAPEDGEAG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KTTERRGYGGPRGRGGRRGGFN+GE  +GERPRR FERHSGTGRGNE KREG+GRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
             DEFAEVAEE VNE EKNVGDEKP+QE DTSG N++NPAKEPEETEPEDKEMTLEEYEK
Sbjct: 181 PADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRK+L+ALKTEERKVDPKEFASMQQLSSKK+NNDIFIKLGSEKDKRKEIADKEERT
Sbjct: 241 LLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGA 360
           KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGY GSS+SN+AAPSIEDPGQFPTLGA
Sbjct: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIEDPGQFPTLGA 359

Query: 361 K 362
           K
Sbjct: 361 K 359

[Close]

BLAST of Pay0003302 vs. ExPASy TrEMBL
Match: A0A6J1F3H7 (RGG repeats nuclear RNA binding protein A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439720 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 2.1e-160
Identity = 318/362 (87.85%), Postives = 335/362 (92.54%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQLIAAK  A  TAP  KKG AQTKP+ S +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPP+QAVRE+RNEGSRGGRGSGRGGGR  GYGRGREGGGFNRD ANSEN +APEDG  G
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGR--GYGRGREGGGFNRDFANSENTSAPEDGEAG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KTTERRGYGGPRGRGGRRGGFN+GE  +GERPRR FERHSGTGRGNE KREG+GRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
             DEFAEVAEE VNE EKNVGDEKP+QE DTSG N++NPAKEPEETEPEDKEMTLEEYEK
Sbjct: 181 PADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKL-GSEKDKRKEIADKEER 300
           LLEDKRK+L+ALKTEERKVDPKEFASMQQLSSKK+NNDIFIKL GSEKDKRKEIADKEER
Sbjct: 241 LLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLQGSEKDKRKEIADKEER 300

Query: 301 TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLG 360
           TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGY GSS+SN+AAPSIEDPGQFPTLG
Sbjct: 301 TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIEDPGQFPTLG 360

Query: 361 AK 362
           AK
Sbjct: 361 AK 360

[Close]

BLAST of Pay0003302 vs. NCBI nr
Match: XP_008459799.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo])

HSP 1 Score: 658.3 bits (1697), Expect = 3.8e-185
Identity = 358/361 (99.17%), Postives = 360/361 (99.72%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTD+PAKEPEETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT
Sbjct: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGA 360
           KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSN+AAPSIEDPGQFP LGA
Sbjct: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPILGA 360

Query: 361 K 362
           K
Sbjct: 361 K 361

[Close]

BLAST of Pay0003302 vs. NCBI nr
Match: KAA0039788.1 (H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo var. makuwa] >TYK24709.1 H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 653.7 bits (1685), Expect = 9.4e-184
Identity = 358/362 (98.90%), Postives = 360/362 (99.45%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQA-VRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVG 120
           PLPPAQA VRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVG
Sbjct: 61  PLPPAQAVVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVG 120

Query: 121 GKTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG 180
           GKTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG
Sbjct: 121 GKTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG 180

Query: 181 RSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYE 240
           RSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTD+PAKEPEETEPEDKEMTLEEYE
Sbjct: 181 RSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYE 240

Query: 241 KLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEER 300
           KLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEER
Sbjct: 241 KLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEER 300

Query: 301 TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLG 360
           TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSN+AAPSIEDPGQFP LG
Sbjct: 301 TKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPILG 360

Query: 361 AK 362
           AK
Sbjct: 361 AK 362

[Close]

BLAST of Pay0003302 vs. NCBI nr
Match: XP_004140509.1 (RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN46515.1 hypothetical protein Csa_004977 [Cucumis sativus])

HSP 1 Score: 630.6 bits (1625), Expect = 8.6e-177
Identity = 342/361 (94.74%), Postives = 351/361 (97.23%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           M TLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKK PAQTKPLPSGAQ NKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDS N+ENINAPEDGVGG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KT+ERRGYGGPRGRGGRRGGFNDGE AEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEVA ETVNETEKNVGDEKPIQE+DTSG NT+NPAKEP+ETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRK+LLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGA 360
           KKSLSINEFLRPA+GERHY PGGRGRGRGRGSRGGYSGS MSN+AAPSI DPGQFPTLGA
Sbjct: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA 360

Query: 361 K 362
           K
Sbjct: 361 K 361

[Close]

BLAST of Pay0003302 vs. NCBI nr
Match: KAG7011066.1 (RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 581.3 bits (1497), Expect = 6.0e-162
Identity = 318/361 (88.09%), Postives = 335/361 (92.80%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQLIAAK  A  TAP  KKG AQTKP+ S +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPP+QAVRE+RNEGSRGGRGSGRGGGR  GYGRGREGGGFNRD ANSEN +APEDG  G
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGR--GYGRGREGGGFNRDFANSENTSAPEDGEAG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KTTERRGYGGPRGRGGRRGGFN+GE  +GERPRR FERHSGTGRGNE+KREG+GRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNEYKREGAGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
             DEFAEVAEE VNE EKNVGDEKP+QE DTSG N +NPAKEPEETEPEDKEMTLEEYEK
Sbjct: 181 PADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNRENPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRK+L+ALKTEERKVDPKEFASMQQLSSKK+NNDIFIKLGSEKDKRKEIADKEERT
Sbjct: 241 LLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGA 360
           KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGY GSS+SN+AAPSIEDPGQFPTLGA
Sbjct: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIEDPGQFPTLGA 359

Query: 361 K 362
           K
Sbjct: 361 K 359

[Close]

BLAST of Pay0003302 vs. NCBI nr
Match: XP_038874269.1 (RGG repeats nuclear RNA binding protein A-like [Benincasa hispida])

HSP 1 Score: 580.9 bits (1496), Expect = 7.8e-162
Identity = 322/361 (89.20%), Postives = 334/361 (92.52%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQLIAA   A   AP SKKGPAQTKP+      NKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAANQVAAVAAPPSKKGPAQTKPV-----ANKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGR  GYGRGREGGGFNRD AN+E+ NAPEDG GG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGR--GYGRGREGGGFNRDFANNESTNAPEDGEGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KT ERRGYGGPRGRGGRRGGFN+GE A+GERPRRAFERHSGTGRGNEFKREG+GRGNWGR
Sbjct: 121 KTAERRGYGGPRGRGGRRGGFNNGEAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGR 180

Query: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKEMTLEEYEK 240
           STDEFAEV EE VNETEKNVGDEKPIQE+DTSG NT+NPAKEPEE  PEDKEMTLEEYEK
Sbjct: 181 STDEFAEVPEEAVNETEKNVGDEKPIQEDDTSGVNTENPAKEPEEAVPEDKEMTLEEYEK 240

Query: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRK+LLALKTEERKVDPKEFASMQQLSSKKDNN+IFIKLGSEKDKRKEIADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNEIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNIAAPSIEDPGQFPTLGA 360
           KKSLSINEFLRPAEGERHY PGGRGRGRGRG RGGYSGSSMSN+AAPSIEDPGQFPTLGA
Sbjct: 301 KKSLSINEFLRPAEGERHYAPGGRGRGRGRGLRGGYSGSSMSNVAAPSIEDPGQFPTLGA 354

Query: 361 K 362
           K
Sbjct: 361 K 354

[Close]

BLAST of Pay0003302 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 275.8 bits (704), Expect = 5.0e-74
Identity = 211/381 (55.38%), Postives = 250/381 (65.62%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSK-KGPAQTKPLPSGAQQNKPASLPS 60
           MATLNPFDLL DDDAEDPSQL      AVA   + K K   Q   LP+         LPS
Sbjct: 1   MATLNPFDLL-DDDAEDPSQL------AVAIEKIDKSKKSGQVSSLPA----KSAPKLPS 60

Query: 61  KPLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSAN---SENINAP-- 120
           KPLPPAQAVRE+R++  RG      GGGRG G+ RGR  GG+NRD  N   S     P  
Sbjct: 61  KPLPPAQAVREARSDAPRG------GGGRG-GFNRGR--GGYNRDDGNNGYSGGYTKPSG 120

Query: 121 EDGVGGKTTERRGYGG-PRGR---------GGRRGGFNDGENAEGERPRRAFERHSGTGR 180
           E  V   + ERRG GG PRG          GGRRGGF++ E  +GERPRRAFER SGTGR
Sbjct: 121 EGDVSKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGR 180

Query: 181 GNEFKREGSGRGNWGRSTDEFAEVAEETVN-ETEKNVGDEKPIQENDTSGANTDNPAKEP 240
           G++FKR+GSGRGNWG   +E A   E     ETEK+VG EKP  ++  + AN ++     
Sbjct: 181 GSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--V 240

Query: 241 EETEPEDKEMTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKL 300
           EE EPEDKEMTL+EYEK+LE+K+K+L +L T ERKVD K F SMQQLS+KK N++IFIKL
Sbjct: 241 EEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKL 300

Query: 301 GSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMS- 360
           GS+KDKRK+  DKEE+ KK++SINEFL+PAEG  +Y  G  GRGRG   RGG S      
Sbjct: 301 GSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGG 355

Query: 361 --NIAAPSIEDPGQFPTLGAK 362
             N AAP+I D  QFP+LG K
Sbjct: 361 YRNEAAPAIGDAAQFPSLGGK 355

[Close]

BLAST of Pay0003302 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-65
Identity = 190/386 (49.22%), Postives = 242/386 (62.69%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MA++NPFDLL DDDAEDPSQ++A+K       PL    P QT          K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTA---------KSGKMPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120
           P PP+QAVRE+RN       G GRG GRG  YGRG  GG  NRDS N++   A E+G GG
Sbjct: 61  PPPPSQAVREARN-----APGGGRGAGRGGSYGRGGRGGN-NRDSRNNDG-PANENGYGG 120

Query: 121 ---KTTERRG--YGGPRG--RGGRRGGF-NDGENAEGERPRRAFERHSGTGRGNEFKREG 180
              ++ E  G   GGP G  RG RRG + N G++ + ERPR+ ++RHS T  GNE KR+G
Sbjct: 121 GYRRSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDG 180

Query: 181 SGRGNWGRSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDKE 240
           +GR NWG + D+   V EE+    +KN+  EK   E + + A  + PA++ EE +PEDKE
Sbjct: 181 AGRANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKE 240

Query: 241 MTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNND-IFIKLGSEKDKRK 300
           MTLEEYEK+LE+K+K+L A K EERKVD K F +MQQLSSKK NND +FIKLG+EKDKR 
Sbjct: 241 MTLEEYEKVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR- 300

Query: 301 EIADKEERTKKSLSINEFLRPAEGERHYTP-----GGR-------------GRGRGRGSR 360
            I ++EE+T+KSLSINEFL+PA+G+ +Y P     GGR             GR    G R
Sbjct: 301 -ITEREEKTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGR 359

[Close]

BLAST of Pay0003302 vs. TAIR 10
Match: AT4G16830.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 229.2 bits (583), Expect = 5.4e-60
Identity = 172/313 (54.95%), Postives = 209/313 (66.77%), Query Frame = 0


Query: 68  VRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSAN---SENINAP--EDGVGGKT 127
           VRE+R++  RG      GGGRG G+ RGR  GG+NRD  N   S     P  E  V   +
Sbjct: 48  VREARSDAPRG------GGGRG-GFNRGR--GGYNRDDGNNGYSGGYTKPSGEGDVSKSS 107

Query: 128 TERRGYGG-PRGR---------GGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREG 187
            ERRG GG PRG          GGRRGGF++ E  +GERPRRAFER SGTGRG++FKR+G
Sbjct: 108 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 167

Query: 188 SGRGNWGRSTDEFAEVAEETVN-ETEKNVGDEKPIQENDTSGANTDNPAKEPEETEPEDK 247
           SGRGNWG   +E A   E     ETEK+VG EKP  ++  + AN ++     EE EPEDK
Sbjct: 168 SGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEPEDK 227

Query: 248 EMTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRK 307
           EMTL+EYEK+LE+K+K+L +L T ERKVD K F SMQQLS+KK N++IFIKLGS+KDKRK
Sbjct: 228 EMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKRK 287

Query: 308 EIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMS---NIAAPS 362
           +  DKEE+ KK++SINEFL+PAEG  +Y  G  GRGRG   RGG S        N AAP+
Sbjct: 288 D--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAAPA 345

[Close]

BLAST of Pay0003302 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-58
Identity = 187/378 (49.47%), Postives = 235/378 (62.17%), Query Frame = 0


Query: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60
           MA+LNPFDLLG DDAEDPSQL      AVA +   +K  A  +P        K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQL------AVALSQKVEKAAAAVQP-------PKAAKFPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSE---NINAPEDG 120
           P PP+QAVRESRN   +GGRG    GGRG G+ RGR  GG+NRD+ N++   N N    G
Sbjct: 61  PAPPSQAVRESRN-APQGGRGG--TGGRG-GFSRGRGNGGYNRDNRNNDAPGNENGFSGG 120

Query: 121 VGGKTTERRG------YGGPRGRGG----RRGGFNDGENAEGERPRRAFERHSGTGRGNE 180
               + +  G       GG R  GG    RRGG  +GE+ + ERP R ++RHS TG G  
Sbjct: 121 YRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTG 180

Query: 181 FKREGSGRGNWGRSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDNPAKEPEETE 240
            KR G GRGNWG + D+    +EE   E EK+   EK   E++T  A  +  A+E  + E
Sbjct: 181 MKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKE 240

Query: 241 PED---KEMTLEEYEKLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKD-NNDIFIKL 300
            E+   +EMTLEEYEK+LE+K+K+L A K EERKVD K F SMQQLS+KK+ + +IFIKL
Sbjct: 241 AEEAEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKL 300

Query: 301 GSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGR-GRGSRG-GYSGSSM 360
           GS+K+KRK   D  E+ KKSLSINEFL+PA+G+R+   GG  RGR GRG RG G +    
Sbjct: 301 GSDKEKRK---DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYA 357

[Close]

BLAST of Pay0003302 vs. TAIR 10
Match: AT4G16830.2 (Hyaluronan / mRNA binding family )

HSP 1 Score: 205.3 bits (521), Expect = 8.3e-53
Identity = 130/218 (59.63%), Postives = 159/218 (72.94%), Query Frame = 0


Query: 148 EGERPRRAFERHSGTGRGNEFKREGSGRGNWGRSTDEFAEVAEETVN-ETEKNVGDEKPI 207
           +GERPRRAFER SGTGRG++FKR+GSGRGNWG   +E A   E     ETEK+VG EKP 
Sbjct: 53  DGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPA 112

Query: 208 QENDTSGANTDNPAKEPEETEPEDKEMTLEEYEKLLEDKRKSLLALKTEERKVDPKEFAS 267
            ++  + AN ++     EE EPEDKEMTL+EYEK+LE+K+K+L +L T ERKVD K F S
Sbjct: 113 VDDVAADANKEDTV--VEEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFES 172

Query: 268 MQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGR 327
           MQQLS+KK N++IFIKLGS+KDKRK+  DKEE+ KK++SINEFL+PAEG  +Y  G  GR
Sbjct: 173 MQQLSNKKSNDEIFIKLGSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGR 232

Query: 328 GRGRGSRGGYSGSSMS---NIAAPSIEDPGQFPTLGAK 362
           GRG   RGG S        N AAP+I D  QFP+LG K
Sbjct: 233 GRGGRGRGGVSSGESGGYRNEAAPAIGDAAQFPSLGGK 265

The following BLAST results are available for this feature:

BLAST of Pay0003302 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23523	7.0e-73	55.38	RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9SQ56	2.3e-68	59.87	RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409...	[more]
O23593	2.0e-64	49.22	RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9LVT8	1.4e-57	49.47	RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]

BLAST of Pay0003302 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBH1	1.9e-185	99.17	H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7TA33	4.6e-184	98.90	H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0K9Z4	4.1e-177	94.74	HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G106...	[more]
A0A6J1EYL1	8.4e-162	88.09	RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1F3H7	2.1e-160	87.85	RGG repeats nuclear RNA binding protein A-like isoform X1 OS=Cucurbita moschata ...	[more]

BLAST of Pay0003302 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459799.1	3.8e-185	99.17	PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo]	[more]
KAA0039788.1	9.4e-184	98.90	H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo var. makuwa] >TYK24...	[more]
XP_004140509.1	8.6e-177	94.74	RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN46515.1 hypothet...	[more]
KAG7011066.1	6.0e-162	88.09	RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyros...	[more]
XP_038874269.1	7.8e-162	89.20	RGG repeats nuclear RNA binding protein A-like [Benincasa hispida]	[more]

BLAST of Pay0003302 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16830.1	5.0e-74	55.38	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	1.5e-65	49.22	Hyaluronan / mRNA binding family	[more]
AT4G16830.3	5.4e-60	54.95	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	1.0e-58	49.47	Hyaluronan / mRNA binding family	[more]
AT4G16830.2	8.3e-53	59.63	Hyaluronan / mRNA binding family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 235..255
None	No IPR available	GENE3D	6.10.140.1040		coord: 150..263 e-value: 4.2E-10 score: 41.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..205
None	No IPR available	PANTHER	PTHR12299:SF53	RGG REPEATS NUCLEAR RNA BINDING PROTEIN A	coord: 1..361
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 152..260 e-value: 9.3E-35 score: 131.5
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 152..259 e-value: 2.8E-26 score: 92.6
IPR019084	Stm1-like, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..81 e-value: 2.4E-19 score: 69.9
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0003302.1	Pay0003302.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding