Pay0003296 (gene) Melon (Payzawat) v1

Overview


Name	Pay0003296
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	replication protein A 32 kDa subunit A-like
Location	chr04: 2691237 .. 2696028 (+)
RNA-Seq Expression	Pay0003296
Synteny	Pay0003296

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCATTTCTCCATTGTTAATTGTTCATCGCGTTATTACTCACAGGATTTTTAAGTATGTTCTCCAGCACCCAGTTTGATTCCGGCAGCGGATTTACCTCTTCTCAGACCAATGACTCCTCTTCAGCGAAGGTAAGTTGCTGTCGCTGCTTCAACTTCTAAGTTTCTGCTTGATTGAGAGATGTTTTTTAAATTAATGAGTAGAATTGGGTTTCAAGGAACCGATACTTCTTATAAAGTTGTTGGGTAGCTAGAATCCAGTGACAGCAAAACTGAAAGCGCAAACCTAAATTGTTTTCAGTTCGCCGGAACGATGATCGGAACGGTGTTGAAATTTCAAGAAATGGGGTTCGAATTCATTTTATATGCTGTTATTTTTGGGTGTAAACCAATTTTTGTTTGCCTAATTCGTGACATTGGATAAATCTTGAGAGAAAATCGTGAATAAAATGGTAACTGTCGGGTGTTTGTTACATTTTCTTCCGTTCCCCCTTTCTTCATATCTTTTTAATTATTCCGTGCAGAGTCGAGAATCTCCGGGCTTGGTTCCGGTAACTGTGAAACAGATCAGTGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGACGTCGATATAACAAACGTATATTTCCTTGTCTTCTCTCCAACTGCTATGTATTATTTTAAAACGACGACAGGAAAACGATGTTGAGGGTATTATGTTAATCTCTTTGGGTGGTTTAGTTATTCTTAGATTCTTTAACCCTTTAACCTTAAGAAGCATGGACATTACGTTAGCAGAGTGTTGAATTCTGCAATGCACAGGGAAGGTTGTGAATTTCAGTTTTCTACATCATATAAATGTTGATTGAAACAAACAGTTGTCAAATCGCAGAAATTTCTATAGTAAACATGTATAATCAATATATAACTTTTCCCCTCGTGACAAGCATTGTTATTAAAAGGCCATGTTGATGAACAGATTCATGATTGGCTCCTCCAGATTTGATCATCAGCCTGTGTATTTCTTTCAAGTTTTTAAGTTCGAGTGTTTCGTTCTGTACTTGTAAAATCTCTTTTGTTACAAGTACTGACATTTTAGTTATTGGGAAAAGGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTCACTGTAGACGATGGAACAGGAACAATTGGTTGCAAAAGATGGTATACTGTTGCAGTTGCAATCTTCCTAAAACTTTTAACCAAATCTTCATTCTAGCCTTGTATCTGTTCCATTTTACTGAAGAATGTGTGTCAAATTTTATTCAGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAGTAAGTTCTTATCTAGTTTGATTCTCTTGTGATGAAAAATACTTTAGTGGTCTTGATTCTCATATAGTTTGATTTTTCATGGCACAGAGATGGAATGTACGTTCGGGTGAATGGGCATTTGAAAATGTTCCAAAGCAACAAGCAAATATTTGCATTCTCCGTTAGGTATGGTATTATGATTCTCCTCAATCTAGTACATGCCTTCGGGATCTCTTTTGAAGTTAAATGTTTTACATATAAGGTTATCATCCTGCTAGGTGTTTTATTGCATGTTGAAATTTTAGGATTTACACATCAAGTGAGTTGTAGTAGGTCAATGTTAGCTAAGCACCGTTCTGGAAAGATGCCATATACGTTCTAATACATTGTTGTGGTAAAACCACCAAATATACAACTACAACCTTCTTGAATAGGATTGACTCCGTTCTATTGGGCCAATTCTCAGTTCTAAGATCTATTGCGGTAAATATAGTCTACTGGATTTGTAAGTAGAACAACCAGGATCTGTTCTTCAGTGTCCTTGAGTTCTGTTTGATTGTCACAGAGAGAGGTACTTGCTATTGGTACGATGGAATTAAGGTCCAATAGAAGAAATAGGTAGTGTTGGTGCCGAAAGACCGGTTTTATTCACATTTTACAAACAAGTGAAGGTGACCGTTGTATTCGTTTCTAATCATAGTGCTCCTAAACTTTCAAACTAAGCATATCAGGACAAGAAAATTTGTTTTCTGAAATGTTTACATTATGATCTTTACTTTGTTGAAGGTCTCGGGGAAGTGTCAGTTGCAGAGAAATATTATGTGCTTCGAAAGTTAATATTTTAAATTCTTAAACTTCTTTCTCAGCGAATTTAAGAAATTTTGAGAATAGTATTAACTTCTTACGTTGCCGGTGCATGGGCACTTTGAGACGTGTCATTTGTTAGTTTTGACACAGTAGTGGAATTTGATCAATTCCATATTAATCCTCGACTTAAAATCAATTATCAGTGGCTAATTAGTTAAACTATTTCTAGATTACATGACTTTGAATGATGACATTTACATATGGGATTTATCAAATTTTCGCCAGTGTTGGTTTAAGAAGTGTTCTGTTCTCCCTTAAAATCTACAGTAACTGATTTCCTTTCTGGATTTCCCTAATTAGTAAAATACAAACAAGCAAACCTCTGGAAAACTAATATCTTGTTAATGCTATATAGTCTCTTTGTTAATCCGTAATTGCCTAAAATTTCTGCATGAAACTACAGTCCAAAGGATTGATTTTTTTTCCAAGCTTGGTCACTAGGCAGTGACCAATATCAAGTAATTATTTGGGTATTGGAAACCGTCTAATGCCAAATATTCTGGCCCTATTGTATATTTGACCAACTGACACGATCATTGAATTTGGTTATGCTTTGCCAGGCCTGTTACAAACTTTGATGAAATTACCTTCCACTTTCTTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGGTACTGGTTCCTGGAGCTGGCTTGGTAGTTATGCTTCTAACTTGTAACTTTATTTTTTATTTGGTCGACGAAATTAATTATTAATGAATATCATAATTCTCAATTCATTTGTCTTAAACTGCTAGAATCTCAAAGGCGATGGATCAACACAGCTCCAAACCTCAGATTCAATTGTGAAGACTCCAGTGCAGAATGGCTCGAGTGGATATCATACAACATCTTCAGCAATAGTGAGTCTTAATTAACCATGATAATTATTGAGAATGTGACAAAAATATCACATGACTATAAATAGAAGATTTAGAATATGTAAGTGAGGAATAATATCTCCATTGGTATGATGTCTTTCGAGTGAAGCCAAAAGTAAAGTAACGTAAGTTACATCTAAAACAAACAATATCATACTATGTAGATGCGTGGGGTTACTTGATTGGAATTCAAATCTAATTTCTTTTTGCAGCCATCTGAGCAGCACACTGTTGATGTTAAAAAGAGCTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCCTCCAGCGTGTAAGTTGCCCCAAACTAAAGTTCGATTTTCTTTTGCAGATTGTTTTGTTTGTTGGCTAATTACTGTGCATTTTCCTATATGAAACTGACTTAAGCTTGCTGGACACTAGGTGTTTTTACATTTAAATAATTGAGCACTACCATCAGATGTGATTTTGAGTCATTCGTGGTACTTGTTAACTTCTGTGAGTAGAAAACAAGACGTTAGGTCGGTGGTTGACTGTTAGTCAGGTCACTTCTGATTATTGGTTCAATAGACACCCACACTGAGTTGACCCTTGGCTTAATAATAAGGGGGGACAAGATATGACTTCAGGTTACACGTTTCAATTTTCATGTGGGCCACTAAAAAAATTCCAACTAATTATTGTAGATTAGTAATTTGGTATTGTCCTTGAGATTTATTGTTGCCCAAGTATAGGACAATGAATTCAGTAGAACTGTCCCATGTAATGTGGAGATGCCATAAACTGTCTGAACACTTGTGGATACAAAAAAAAAGTATAGAACAAAGATTATATGCAATTTAAGTTGCATTTAATGACTTATCCTTTGTTTTGCTACGTACTAAAAAGTATATATTTTTTTTAGATAAATATAGGTTATGATATGGTTTTGGTTTATGAAGTTATTTTAATTCTTTTACTTTTTAAATGTATTTAGTTTTTGCACTGTCAATATCTTATAAAATTATTCAAATTTGATGTTAGTTTTCATCGAAGTTTGTTAATTAAATAGAGTAAACGAGACTAAACTTTGAGATAACGTTTGAGATTTATCGAATGTGTAACGGTTAAATTTGAATATCTTAGAGTACCCGAGCTTAAGTGTTTTAACTACATACCTACTTATTATTTCGTTTATCTCTAGTGAAGTTATTTTATTTATTTGACAATTAATTATAATTTAGTATAATGATCAAGAGAGTTAAAAAATTGTTCTATTAATTTTTTTTCTTCTTTTCAGTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATACTGTATGTCTCCCCTACCTCCTTCCAACTCCCTTGTGTTGGGGTTAATGTGTGAATTAACTTATATTTACTTTTTTGTTTTCTTTTGGTTTTGGTTTAGGGATTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAGAACTAATCATGACTTTATTAGTTTCTTTTTTTTTGGTTGCATTGCTATGCGATAGGTGTGGTTTAGACAGACATATACTGCTTTGCTTGAATTTAAGCATCTCTCTTTTACTTGCTTGTTACATGTGTATATGTATTTTGAAGCTTCTTTCTCCTAATTCTAATATTATTAGATTAAGCCTTAAGCACCAATTATATCCCAAAC

mRNA sequence

CTTCCATTTCTCCATTGTTAATTGTTCATCGCGTTATTACTCACAGGATTTTTAAGTATGTTCTCCAGCACCCAGTTTGATTCCGGCAGCGGATTTACCTCTTCTCAGACCAATGACTCCTCTTCAGCGAAGAGTCGAGAATCTCCGGGCTTGGTTCCGGTAACTGTGAAACAGATCAGTGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGACGTCGATATAACAAACGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTCACTGTAGACGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTACGTTCGGGTGAATGGGCATTTGAAAATGTTCCAAAGCAACAAGCAAATATTTGCATTCTCCGTTAGGCCTGTTACAAACTTTGATGAAATTACCTTCCACTTTCTTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGAATCTCAAAGGCGATGGATCAACACAGCTCCAAACCTCAGATTCAATTGTGAAGACTCCAGTGCAGAATGGCTCGAGTGGATATCATACAACATCTTCAGCAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAGCTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATACTGGATTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAGAACTAATCATGACTTTATTAGTTTCTTTTTTTTTGGTTGCATTGCTATGCGATAGGTGTGGTTTAGACAGACATATACTGCTTTGCTTGAATTTAAGCATCTCTCTTTTACTTGCTTGTTACATGTGTATATGTATTTTGAAGCTTCTTTCTCCTAATTCTAATATTATTAGATTAAGCCTTAAGCACCAATTATATCCCAAAC

Coding sequence (CDS)

ATGTTCTCCAGCACCCAGTTTGATTCCGGCAGCGGATTTACCTCTTCTCAGACCAATGACTCCTCTTCAGCGAAGAGTCGAGAATCTCCGGGCTTGGTTCCGGTAACTGTGAAACAGATCAGTGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGACGTCGATATAACAAACGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTCACTGTAGACGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTACGTTCGGGTGAATGGGCATTTGAAAATGTTCCAAAGCAACAAGCAAATATTTGCATTCTCCGTTAGGCCTGTTACAAACTTTGATGAAATTACCTTCCACTTTCTTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGAATCTCAAAGGCGATGGATCAACACAGCTCCAAACCTCAGATTCAATTGTGAAGACTCCAGTGCAGAATGGCTCGAGTGGATATCATACAACATCTTCAGCAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAGCTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATACTGGATTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG

Protein sequence

MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

Homology

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BLAST of Pay0003296 vs. ExPASy Swiss-Prot
Match: Q9ZQ19 (Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A PE=1 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 5.3e-65
Identity = 135/281 (48.04%), Postives = 194/281 (69.04%), Query Frame = 0


Query: 1   MFSSTQFD-----SGSGFTSSQ-----TNDSSSAKSRESPGLVPVTVKQISEASHSGEEK 60
           MFSS+QF+     SG GF SSQ      + SS+AK+R+  GLVPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINDVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQ 120
           +  VIN + +TNV++VG V +K E + T++ FT+DDGTG I CKRWV++TFD ++ME ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGST 180
           DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH++ECIH + +NS+ Q  +    T
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 QLQTSDSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKER 240
           Q       V T  Q GS+    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++
Sbjct: 181 Q------SVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQ 240

Query: 241 GIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK 269
           GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Sbjct: 241 GIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of Pay0003296 vs. ExPASy Swiss-Prot
Match: Q8LFJ8 (Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 7.2e-46
Identity = 109/271 (40.22%), Postives = 170/271 (62.73%), Query Frame = 0


Query: 9   SGSGFTSSQT-----NDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNV 68
           +G GF  SQ        SSS K+R+   L+P+T+KQ+S AS +GE  +NF I+ VDI  V
Sbjct: 13  AGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTV 72

Query: 69  TIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMF 128
            IVG++S    R T + F VDDGTG + C RW +   +T++ME ++ GMYVR++GHLK+F
Sbjct: 73  VIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIF 132

Query: 129 QSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QLQTSDSIVKT 188
           Q  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  ++  D +T + Q   S + T
Sbjct: 133 QGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPT 192

Query: 189 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 248
           P +   +G    S+  P++ +  D      + VL+YL  P  +  E G+H D ++++L+I
Sbjct: 193 PAKPYQTG---PSNQFPNQFN--DSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRI 252

Query: 249 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           P+ ++ +++  L ++G IYST+DE  FKS A
Sbjct: 253 PLLQVKEALEQLSNDGCIYSTLDETCFKSTA 276

[Close]

BLAST of Pay0003296 vs. ExPASy Swiss-Prot
Match: Q6K9U2 (Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2A PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-45
Identity = 116/279 (41.58%), Postives = 166/279 (59.50%), Query Frame = 0


Query: 2   FSSTQFDSGSGFTSSQ---TNDSSSAKSRESPGLVPVTVKQISEASHS---GEEKANFVI 61
           FS     S S FTSSQ    + ++ +KSR +   +P+TVKQISEA  S   GE+ A FV+
Sbjct: 4   FSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVV 63

Query: 62  NDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVR 121
           + V+  NV +VG VS K ERNTD++FT+DDGTG +   RWVND  D+ +   +Q+GMYV 
Sbjct: 64  DGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVS 123

Query: 122 VNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD 181
           V G LK  Q  K+  AF++RPVT+++E+T HF++C+  HL N+K Q +     T      
Sbjct: 124 VIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQ-IGSPAKTY----- 183

Query: 182 SIVKTPVQNGSSGYHTTSSAIPSEQHTVDV----KKSCDELVLDYLQLPSSVAKERGIHR 241
           S + +   NG S   T +S   +    + V    K   +  VL+  + P++V  E G+H 
Sbjct: 184 SAMGSSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHI 243

Query: 242 DELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSA 271
           DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Sbjct: 244 DEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSA 276

[Close]

BLAST of Pay0003296 vs. ExPASy Swiss-Prot
Match: Q6H7J5 (Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2B PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.7e-42
Identity = 96/269 (35.69%), Postives = 159/269 (59.11%), Query Frame = 0


Query: 10  GSGFTSSQTNDSSSA---------KSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 69
           G GF  SQ  +++           KSR +  L+P+TVKQI +AS + ++K+NF +N +++
Sbjct: 27  GGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFAVNGMEV 86

Query: 70  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 129
           + V +VG++  K +R TD++FT+DDGTG +   RW ND+ DTK+M +IQ+G YV VNG L
Sbjct: 87  STVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGDYVIVNGGL 146

Query: 130 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 189
           K FQ  +Q+ A+SVR +TNF+++T HFL C+H HL  ++ ++     +     + ++ + 
Sbjct: 147 KGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATGTPNQTMPRD 206

Query: 190 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 249
            +    S     +S   + Q+T       D LVL+    P+ +  + G+  D +S++L +
Sbjct: 207 SMAYNQSPLTNQASTFSAPQNTGTGTNMID-LVLNVFHDPAVMNDDHGVGVDYVSRRLNL 266

Query: 250 PMEKILDSIRSLEDEGLIYSTIDEFHFKS 270
           P E +   I    D G +Y+TID+ H+KS
Sbjct: 267 PEETVGKIIIDQVDLGHLYATIDDHHYKS 294

[Close]

BLAST of Pay0003296 vs. ExPASy Swiss-Prot
Match: Q5Z8L1 (Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2C PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-22
Identity = 62/160 (38.75%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 9   SGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEA-----SHSGEEKANFVINDVDITNV 68
           S +G  ++     S  +     G VP TV  IS +     +  G     F I+ V+ TNV
Sbjct: 27  SAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFAAALAADGGGDPVFSIDGVETTNV 86

Query: 69  TIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMF 128
            ++G+V     R+TD+ FT+DD TG I   RW+ D  DT+    IQ+G+YV+V  +L  F
Sbjct: 87  RVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRDTSYIQEGVYVKVQVNLMGF 146

Query: 129 QSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRN--SKLQ 162
           Q+ KQ  A S+RP+ NF+E+  HF+EC+H HL +  SK+Q
Sbjct: 147 QAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQSKMQ 186

[Close]

BLAST of Pay0003296 vs. ExPASy TrEMBL
Match: A0A1S3CR64 (replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503766 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.2e-146
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI
Sbjct: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. ExPASy TrEMBL
Match: A0A0A0LEG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881710 PE=3 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.9e-142
Identity = 262/271 (96.68%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSSTQFDS SGFTSSQTNDSSSAKSRESPGL+PVTVKQISEASHSGEEKANFVIN VDI
Sbjct: 1   MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           KMFQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNLKG+GSTQLQTSDSIVKT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGS+GYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIH+DELSQQLK+
Sbjct: 181 PVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKL 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. ExPASy TrEMBL
Match: A0A6J1F8S8 (replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC111443128 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.5e-134
Identity = 245/271 (90.41%), Postives = 261/271 (96.31%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSS+QFDSGSGFTSSQTNDSSSAK+RE+PGLVP TVKQISEASHSGEEKANFVIN VDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           K+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SDSIVKT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           P+QNGSSGY T SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. ExPASy TrEMBL
Match: A0A6J1IMU1 (replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC111476648 PE=3 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 243/273 (89.01%), Postives = 259/273 (94.87%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSS+QFDSGSGFT SQTNDSSSAK+RE+PGLVP TVKQISEASHSGEEKANF IN VDI
Sbjct: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           K+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SDSIVKT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYHTTS--SAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQL 240
           P+QNGSSGY T S  S +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQL
Sbjct: 181 PMQNGSSGYQTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQL 240

Query: 241 KIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           KIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 KIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 273

[Close]

BLAST of Pay0003296 vs. ExPASy TrEMBL
Match: A0A6J1CUB8 (replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC111014622 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 4.1e-121
Identity = 232/271 (85.61%), Postives = 247/271 (91.14%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSS+QFDSGSGFTSSQ  DS+SAKSRESPGLVPVTVKQISEA HSGEEKANFVIN VDI
Sbjct: 1   MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDTKQM++IQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTKQMDDIQDGMYIRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           K+FQ N QIFAFSVRPVTN DEITFHF+ECIHD+LRNSKLQ L G  STQ Q+SDS V  
Sbjct: 121 KIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQ-LNGVASTQSQSSDSTVNA 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
            VQ+GSSGY T SS + S QHTVDVKK+ D+LVLDYLQLPSSVAKE+GIHRDELSQQLKI
Sbjct: 181 LVQSGSSGYQTASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKI 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           P+EKILDSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PLEKILDSIRSLEDEGLIYSTIDEFHFKSAA 270

[Close]

BLAST of Pay0003296 vs. NCBI nr
Match: XP_008466326.1 (PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo])

HSP 1 Score: 528.1 bits (1359), Expect = 4.5e-146
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI
Sbjct: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. NCBI nr
Match: XP_004136317.1 (replication protein A 32 kDa subunit A [Cucumis sativus] >KGN60158.1 hypothetical protein Csa_001153 [Cucumis sativus])

HSP 1 Score: 515.0 bits (1325), Expect = 3.9e-142
Identity = 262/271 (96.68%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSSTQFDS SGFTSSQTNDSSSAKSRESPGL+PVTVKQISEASHSGEEKANFVIN VDI
Sbjct: 1   MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           KMFQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNLKG+GSTQLQTSDSIVKT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGS+GYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIH+DELSQQLK+
Sbjct: 181 PVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKL 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. NCBI nr
Match: XP_038897330.1 (replication protein A 32 kDa subunit A-like [Benincasa hispida])

HSP 1 Score: 498.0 bits (1281), Expect = 5.0e-137
Identity = 254/271 (93.73%), Postives = 261/271 (96.31%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFS TQFDS SGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFV+N VDI
Sbjct: 1   MFSGTQFDSASGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVLNGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNV IVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL
Sbjct: 61  TNVNIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           K+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL GDG TQ Q+SDSIVKT
Sbjct: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGPTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGSSG+ T SS IPSEQHTVDVKK+CDELVLDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PVQNGSSGHQTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. NCBI nr
Match: XP_022936562.1 (replication protein A 32 kDa subunit A-like [Cucurbita moschata])

HSP 1 Score: 488.0 bits (1255), Expect = 5.2e-134
Identity = 245/271 (90.41%), Postives = 261/271 (96.31%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSS+QFDSGSGFTSSQTNDSSSAK+RE+PGLVP TVKQISEASHSGEEKANFVIN VDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           K+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SDSIVKT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           P+QNGSSGY T SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. NCBI nr
Match: KAG7024504.1 (Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132
Identity = 243/271 (89.67%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60
           MFSS+QFDSGSGFTSSQT DSSSAK+RE+PGLVP TVKQISEASHSGEEKANF IN VDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTYDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180
           K+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SDSIVKT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           P+QNGSSGY T SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of Pay0003296 vs. TAIR 10
Match: AT2G24490.1 (replicon protein A2 )

HSP 1 Score: 249.2 bits (635), Expect = 3.8e-66
Identity = 135/281 (48.04%), Postives = 194/281 (69.04%), Query Frame = 0


Query: 1   MFSSTQFD-----SGSGFTSSQ-----TNDSSSAKSRESPGLVPVTVKQISEASHSGEEK 60
           MFSS+QF+     SG GF SSQ      + SS+AK+R+  GLVPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINDVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQ 120
           +  VIN + +TNV++VG V +K E + T++ FT+DDGTG I CKRWV++TFD ++ME ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGST 180
           DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH++ECIH + +NS+ Q  +    T
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 QLQTSDSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKER 240
           Q       V T  Q GS+    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++
Sbjct: 181 Q------SVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQ 240

Query: 241 GIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK 269
           GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Sbjct: 241 GIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of Pay0003296 vs. TAIR 10
Match: AT2G24490.2 (replicon protein A2 )

HSP 1 Score: 249.2 bits (635), Expect = 3.8e-66
Identity = 135/281 (48.04%), Postives = 194/281 (69.04%), Query Frame = 0


Query: 1   MFSSTQFD-----SGSGFTSSQ-----TNDSSSAKSRESPGLVPVTVKQISEASHSGEEK 60
           MFSS+QF+     SG GF SSQ      + SS+AK+R+  GLVPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINDVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQ 120
           +  VIN + +TNV++VG V +K E + T++ FT+DDGTG I CKRWV++TFD ++ME ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGST 180
           DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH++ECIH + +NS+ Q  +    T
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 QLQTSDSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKER 240
           Q       V T  Q GS+    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++
Sbjct: 181 Q------SVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQ 240

Query: 241 GIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK 269
           GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Sbjct: 241 GIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of Pay0003296 vs. TAIR 10
Match: AT3G02920.1 (Replication protein A, subunit RPA32 )

HSP 1 Score: 185.7 bits (470), Expect = 5.1e-47
Identity = 109/271 (40.22%), Postives = 170/271 (62.73%), Query Frame = 0


Query: 9   SGSGFTSSQT-----NDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNV 68
           +G GF  SQ        SSS K+R+   L+P+T+KQ+S AS +GE  +NF I+ VDI  V
Sbjct: 13  AGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTV 72

Query: 69  TIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMF 128
            IVG++S    R T + F VDDGTG + C RW +   +T++ME ++ GMYVR++GHLK+F
Sbjct: 73  VIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIF 132

Query: 129 QSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QLQTSDSIVKT 188
           Q  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  ++  D +T + Q   S + T
Sbjct: 133 QGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPT 192

Query: 189 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 248
           P +   +G    S+  P++ +  D      + VL+YL  P  +  E G+H D ++++L+I
Sbjct: 193 PAKPYQTG---PSNQFPNQFN--DSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRI 252

Query: 249 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 272
           P+ ++ +++  L ++G IYST+DE  FKS A
Sbjct: 253 PLLQVKEALEQLSNDGCIYSTLDETCFKSTA 276

[Close]

BLAST of Pay0003296 vs. TAIR 10
Match: AT3G02920.2 (Replication protein A, subunit RPA32 )

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-46
Identity = 102/253 (40.32%), Postives = 163/253 (64.43%), Query Frame = 0


Query: 22  SSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITF 81
           SS ++R+   L+P+T+KQ+S AS +GE  +NF I+ VDI  V IVG++S    R T + F
Sbjct: 51  SSIRNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTVVIVGRISRMENRITQVDF 110

Query: 82  TVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFD 141
            VDDGTG + C RW +   +T++ME ++ GMYVR++GHLK+FQ  + +  FSVRPVT+F+
Sbjct: 111 VVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFN 170

Query: 142 EITFHFLECIHDHLRNSKLQ--NLKGDGST-QLQTSDSIVKTPVQNGSSGYHTTSSAIPS 201
           EI  HF EC++ H+ N+KL+  ++  D +T + Q   S + TP +   +G    S+  P+
Sbjct: 171 EIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPTPAKPYQTG---PSNQFPN 230

Query: 202 EQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLI 261
           + +  D      + VL+YL  P  +  E G+H D ++++L+IP+ ++ +++  L ++G I
Sbjct: 231 QFN--DSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCI 290

Query: 262 YSTIDEFHFKSAA 272
           YST+DE  FKS A
Sbjct: 291 YSTLDETCFKSTA 296

The following BLAST results are available for this feature:

BLAST of Pay0003296 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ19	5.3e-65	48.04	Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A ...	[more]
Q8LFJ8	7.2e-46	40.22	Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B ...	[more]
Q6K9U2	4.6e-45	41.58	Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6H7J5	3.7e-42	35.69	Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5Z8L1	1.5e-22	38.75	Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Pay0003296 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CR64	2.2e-146	100.00	replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A0A0LEG7	1.9e-142	96.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881710 PE=3 SV=1	[more]
A0A6J1F8S8	2.5e-134	90.41	replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IMU1	1.2e-131	89.01	replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1CUB8	4.1e-121	85.61	replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Pay0003296 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466326.1	4.5e-146	100.00	PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo]	[more]
XP_004136317.1	3.9e-142	96.68	replication protein A 32 kDa subunit A [Cucumis sativus] >KGN60158.1 hypothetica...	[more]
XP_038897330.1	5.0e-137	93.73	replication protein A 32 kDa subunit A-like [Benincasa hispida]	[more]
XP_022936562.1	5.2e-134	90.41	replication protein A 32 kDa subunit A-like [Cucurbita moschata]	[more]
KAG7024504.1	1.3e-132	89.67	Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of Pay0003296 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24490.1	3.8e-66	48.04	replicon protein A2	[more]
AT2G24490.2	3.8e-66	48.04	replicon protein A2	[more]
AT3G02920.1	5.1e-47	40.22	Replication protein A, subunit RPA32	[more]
AT3G02920.2	4.3e-46	40.32	Replication protein A, subunit RPA32	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 63..135 e-value: 3.4E-10 score: 39.8
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 203..271 e-value: 2.8E-16 score: 61.0
IPR014892	Replication protein A, C-terminal	PFAM	PF08784	RPA_C	coord: 154..264 e-value: 1.1E-13 score: 51.7
IPR014646	Replication factor A protein 2	PIRSF	PIRSF036949	RPA32	coord: 1..271 e-value: 1.7E-72 score: 241.7
None	No IPR available	GENE3D	2.40.50.140		coord: 29..160 e-value: 4.8E-43 score: 147.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR13989:SF34	REPLICATION PROTEIN A 32 KDA SUBUNIT A	coord: 1..270
None	No IPR available	CDD	cd04478	RPA2_DBD_D	coord: 62..155 e-value: 2.89713E-42 score: 138.116
IPR040260	Replication factor A protein-like	PANTHER	PTHR13989	REPLICATION PROTEIN A-RELATED	coord: 1..270
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 32..158
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 207..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0003296.1	Pay0003296.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0005662	DNA replication factor A complex
cellular_component	GO:0035861	site of double-strand break
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding