Pay0003169 (gene) Melon (Payzawat) v1

Overview
NamePay0003169
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr07: 28373490 .. 28373991 (-)
RNA-Seq ExpressionPay0003169
SyntenyPay0003169
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCCATTCTGAGTTCTCAAGGTCTCGTCATTGCAACAGCCATGGTCGTCTCTTCCACAGCTCTCTTTCTCGCCTTCTCCAACCACCATCACAAGATGATCAGTCCAATAATCCCACCCTCCACATCCCTTCTTCCTTCTTGCTTTTCATCTGGTAAATTTTCTTTCTTTTTTATGTTATTTTGTTTAGATTATGAACTTGAAGATTTTATGTTGATGGGGCCGTTTTGATGTTGATTATTATGAATAGATGAAAAGAAGAAACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGGTGAGATTTGCTGAGGATGTGAAAGAACCAAAAGGGAATGGAGAAGAGTATAGAAGAGAACATGATGAGAAAATAGGTTTAATGGAGGAAACGAGAAGAGGAAGGAGAATAAGTTGTAGAAACGATATTCCTGCTAATCGAATTGCTTTGTATAATGGAATTCTTAAAGATCGATCGCAAAGGATTCAATGTTCGTTTTGA

mRNA sequence

ATGTCTTCCATTCTGAGTTCTCAAGGTCTCGTCATTGCAACAGCCATGGTCGTCTCTTCCACAGCTCTCTTTCTCGCCTTCTCCAACCACCATCACAAGATGATCAGTCCAATAATCCCACCCTCCACATCCCTTCTTCCTTCTTGCTTTTCATCTGGTAAATTTTCTTTCTTTTTTATAAGAAACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGGTGAGATTTGCTGAGGATGTGAAAGAACCAAAAGGGAATGGAGAAGAGTATAGAAGAGAACATGATGAGAAAATAGGTTTAATGGAGGAAACGAGAAGAGGAAGGAGAATAAGTTGTAGAAACGATATTCCTGCTAATCGAATTGCTTTGTATAATGGAATTCTTAAAGATCGATCGCAAAGGATTCAATGTTCGTTTTGA

Coding sequence (CDS)

ATGTCTTCCATTCTGAGTTCTCAAGGTCTCGTCATTGCAACAGCCATGGTCGTCTCTTCCACAGCTCTCTTTCTCGCCTTCTCCAACCACCATCACAAGATGATCAGTCCAATAATCCCACCCTCCACATCCCTTCTTCCTTCTTGCTTTTCATCTGGTAAATTTTCTTTCTTTTTTATAAGAAACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGGTGAGATTTGCTGAGGATGTGAAAGAACCAAAAGGGAATGGAGAAGAGTATAGAAGAGAACATGATGAGAAAATAGGTTTAATGGAGGAAACGAGAAGAGGAAGGAGAATAAGTTGTAGAAACGATATTCCTGCTAATCGAATTGCTTTGTATAATGGAATTCTTAAAGATCGATCGCAAAGGATTCAATGTTCGTTTTGA

Protein sequence

MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFIRNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANRIALYNGILKDRSQRIQCSF
Homology
BLAST of Pay0003169 vs. ExPASy TrEMBL
Match: A0A1S3BY99 (uncharacterized protein LOC103494703 OS=Cucumis melo OX=3656 GN=LOC103494703 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55
Identity = 119/139 (85.61%), Postives = 128/139 (92.09%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSS +      
Sbjct: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSDE------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120
               ++++++++KVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR
Sbjct: 61  ----KKKQKKKKKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120

Query: 121 IALYNGILKDRSQRIQCSF 140
           IALYNGILKDRSQRIQCSF
Sbjct: 121 IALYNGILKDRSQRIQCSF 129

BLAST of Pay0003169 vs. ExPASy TrEMBL
Match: A0A0A0KVF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004980 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.4e-50
Identity = 110/139 (79.14%), Postives = 124/139 (89.21%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSILSSQ LV+ATAMVVSSTALFLAFSNHHHKMI+P IPPSTS LP CFSS +      
Sbjct: 1   MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTS-LPPCFSSDE------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120
           + ++R ++++++KVRFAEDVKEPKGNGEEYRREHDEK+GLMEETRR RRISCRND+P NR
Sbjct: 61  KKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRRRRRISCRNDVPGNR 120

Query: 121 IALYNGILKDRSQRIQCSF 140
           IALYNGILKDRSQRIQCSF
Sbjct: 121 IALYNGILKDRSQRIQCSF 132

BLAST of Pay0003169 vs. ExPASy TrEMBL
Match: A0A5D3E1D5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001740 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.0e-43
Identity = 102/139 (73.38%), Postives = 111/139 (79.86%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMI+                        
Sbjct: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMIN------------------------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120
               ++++++++KVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR
Sbjct: 61  ---EKKKQKKKKKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 112

Query: 121 IALYNGILKDRSQRIQCSF 140
           IALYNGILKDRSQRIQCSF
Sbjct: 121 IALYNGILKDRSQRIQCSF 112

BLAST of Pay0003169 vs. ExPASy TrEMBL
Match: A0A6J1IWF1 (uncharacterized protein LOC111479184 OS=Cucurbita maxima OX=3661 GN=LOC111479184 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 92/140 (65.71%), Postives = 110/140 (78.57%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSIL+SQGLVIATAMVVSSTALFLAFS HH   I+P+  PS +LL SCFSS K      
Sbjct: 1   MSSILTSQGLVIATAMVVSSTALFLAFSKHH--KINPL--PSKALLSSCFSSDK------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRIS-CRNDIPAN 120
              R++++++++KVRFAEDVKEPKGNGEEYRREHDE++G+ E  R     S CRN+IPAN
Sbjct: 61  ---RKKKKKKKKKVRFAEDVKEPKGNGEEYRREHDERVGMAERRRTTTSSSCCRNEIPAN 120

Query: 121 RIALYNGILKDRSQRIQCSF 140
           R+ALYNG+LK RS R QCSF
Sbjct: 121 RVALYNGMLKQRSLRTQCSF 127

BLAST of Pay0003169 vs. ExPASy TrEMBL
Match: A0A6J1GVB7 (uncharacterized protein LOC111457756 OS=Cucurbita moschata OX=3662 GN=LOC111457756 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.8e-35
Identity = 91/139 (65.47%), Postives = 109/139 (78.42%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSIL+SQGLVIATAMVVSSTALFLAFS HH   I+P+  PS SLL SCFSS +      
Sbjct: 1   MSSILTSQGLVIATAMVVSSTALFLAFSKHH--KINPL--PSKSLLSSCFSSDE------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120
              +++++++++KVRFAEDVKEPKGNGEEYRREHDE++ + E  RR     CRN+IPANR
Sbjct: 61  -KNKKKKKKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAE--RRTSSSCCRNEIPANR 120

Query: 121 IALYNGILKDRSQRIQCSF 140
           +ALYNGILK RS R QCSF
Sbjct: 121 VALYNGILKQRSLRTQCSF 126

BLAST of Pay0003169 vs. NCBI nr
Match: XP_008454240.1 (PREDICTED: uncharacterized protein LOC103494703 [Cucumis melo])

HSP 1 Score: 224.9 bits (572), Expect = 4.2e-55
Identity = 119/139 (85.61%), Postives = 128/139 (92.09%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSS +      
Sbjct: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSDE------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120
               ++++++++KVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR
Sbjct: 61  ----KKKQKKKKKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120

Query: 121 IALYNGILKDRSQRIQCSF 140
           IALYNGILKDRSQRIQCSF
Sbjct: 121 IALYNGILKDRSQRIQCSF 129

BLAST of Pay0003169 vs. NCBI nr
Match: XP_011652971.1 (uncharacterized protein LOC101211217 [Cucumis sativus] >KGN52889.1 hypothetical protein Csa_014627 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 9.0e-50
Identity = 110/139 (79.14%), Postives = 124/139 (89.21%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSILSSQ LV+ATAMVVSSTALFLAFSNHHHKMI+P IPPSTS LP CFSS +      
Sbjct: 1   MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTS-LPPCFSSDE------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120
           + ++R ++++++KVRFAEDVKEPKGNGEEYRREHDEK+GLMEETRR RRISCRND+P NR
Sbjct: 61  KKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRRRRRISCRNDVPGNR 120

Query: 121 IALYNGILKDRSQRIQCSF 140
           IALYNGILKDRSQRIQCSF
Sbjct: 121 IALYNGILKDRSQRIQCSF 132

BLAST of Pay0003169 vs. NCBI nr
Match: KAA0044441.1 (hypothetical protein E6C27_scaffold46G001730 [Cucumis melo var. makuwa] >TYK29568.1 hypothetical protein E5676_scaffold655G001740 [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 8.2e-43
Identity = 102/139 (73.38%), Postives = 111/139 (79.86%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMI+                        
Sbjct: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMIN------------------------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 120
               ++++++++KVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR
Sbjct: 61  ---EKKKQKKKKKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRISCRNDIPANR 112

Query: 121 IALYNGILKDRSQRIQCSF 140
           IALYNGILKDRSQRIQCSF
Sbjct: 121 IALYNGILKDRSQRIQCSF 112

BLAST of Pay0003169 vs. NCBI nr
Match: XP_038901306.1 (uncharacterized protein LOC120088227 [Benincasa hispida])

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-41
Identity = 103/140 (73.57%), Postives = 119/140 (85.00%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSILSSQGLVIATAMVVSSTALFLAFSNHH   I+PII PS SLLPSCFSS +      
Sbjct: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHH--KINPII-PSISLLPSCFSSDE-----K 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLME-ETRRGRRISCRNDIPAN 120
           +  ++++RR+++KVRFAEDVKEPKGNGEEYRREHDEK+G+ E +  R R  +CRN+IPAN
Sbjct: 61  KKEKKKQRRKKKKVRFAEDVKEPKGNGEEYRREHDEKMGMEERKLTRTRTSNCRNEIPAN 120

Query: 121 RIALYNGILKDRSQRIQCSF 140
           R+ALYNGILKDRSQRIQCSF
Sbjct: 121 RVALYNGILKDRSQRIQCSF 132

BLAST of Pay0003169 vs. NCBI nr
Match: XP_023528178.1 (uncharacterized protein LOC111791169 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.1 bits (414), Expect = 8.7e-37
Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = 0

Query: 1   MSSILSSQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFFI 60
           MSSIL+SQGLVIATAMVVSSTALFLAFSNHH   I+P+  PS SLL SCFSS K      
Sbjct: 1   MSSILTSQGLVIATAMVVSSTALFLAFSNHH--KINPL--PSKSLLSSCFSSDK------ 60

Query: 61  RNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRIS--CRNDIPA 120
              +++++++++KVRFAEDVKEPKGNGEEYRREHDE++ + E  RR R  S  CRN+IPA
Sbjct: 61  ---KKKKKKKKKKVRFAEDVKEPKGNGEEYRREHDERLAMAERRRRTRTSSSCCRNEIPA 120

Query: 121 NRIALYNGILKDRSQRIQCSF 140
           NR+ALYNGILK RS R QCSF
Sbjct: 121 NRVALYNGILKQRSLRTQCSF 128

BLAST of Pay0003169 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22
Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 0

Query: 1   MSSILS-SQGLVIATAMVVSSTALFLAFSNHHHKMISPIIPPSTSLLPSCFSSGKFSFFF 60
           M+ ILS S G+VIATAMV SSTALFLA S    +  S        +L SC SS       
Sbjct: 1   MTCILSCSHGVVIATAMVFSSTALFLAIS----RQFSGNQTSDQQILRSCLSS------- 60

Query: 61  IRNRRRRRRRRRRKVRFAEDVKEPKGNGEEYRREHDEKIGLMEETRRGRRIS-CRNDIPA 120
              ++++R+ +++KV+FAE+VKE KGNGEEYR++   +I   +  +  +  S CRND+PA
Sbjct: 61  -EEKKKQRKNKKKKVKFAENVKETKGNGEEYRKKSLRRIVPEQMIKPEKTGSVCRNDMPA 120

Query: 121 NRIALYNGILKDRSQRIQCSF 140
           NRIALYNGIL+DR  RIQCS+
Sbjct: 121 NRIALYNGILRDRDHRIQCSY 129

BLAST of Pay0003169 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 4.1e-16
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 0

Query: 6   SSQGLVIATAMVVSSTALFLAFSNHHH------KMISPIIPPSTSLLPSCFSSGKFSFFF 65
           S+  +VIATAMV SSTALFLA +   H      K++   + P   +L SC SS       
Sbjct: 5   SNGTVVIATAMVCSSTALFLAMARQFHGNHQNPKVLDQTLRP---ILRSCLSS------- 64

Query: 66  IRNRRRRRRRRRRKVRFAEDVKEPKGNGEEY-RREHDEKIGLMEETRRGRRIS-CR-NDI 125
                +++ ++ +KVRFA++VK+ KGNGEEY RRE + K      T+ G+  S CR + +
Sbjct: 65  --EETKKQGKKIKKVRFADNVKDTKGNGEEYRRRELNRKSVPKPVTKPGKTGSMCRISTM 124

Query: 126 PANRIALYNGILKDRSQRIQCSF 140
           PANR+ALYNGIL+DR  R+Q S+
Sbjct: 125 PANRMALYNGILRDRDHRVQYSY 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BY992.0e-5585.61uncharacterized protein LOC103494703 OS=Cucumis melo OX=3656 GN=LOC103494703 PE=... [more]
A0A0A0KVF64.4e-5079.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004980 PE=4 SV=1[more]
A0A5D3E1D54.0e-4373.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1IWF11.4e-3565.71uncharacterized protein LOC111479184 OS=Cucurbita maxima OX=3661 GN=LOC111479184... [more]
A0A6J1GVB76.8e-3565.47uncharacterized protein LOC111457756 OS=Cucurbita moschata OX=3662 GN=LOC1114577... [more]
Match NameE-valueIdentityDescription
XP_008454240.14.2e-5585.61PREDICTED: uncharacterized protein LOC103494703 [Cucumis melo][more]
XP_011652971.19.0e-5079.14uncharacterized protein LOC101211217 [Cucumis sativus] >KGN52889.1 hypothetical ... [more]
KAA0044441.18.2e-4373.38hypothetical protein E6C27_scaffold46G001730 [Cucumis melo var. makuwa] >TYK2956... [more]
XP_038901306.13.4e-4173.57uncharacterized protein LOC120088227 [Benincasa hispida][more]
XP_023528178.18.7e-3767.38uncharacterized protein LOC111791169 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G52565.12.9e-2249.65unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15760.14.1e-1644.06unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..93
NoneNo IPR availablePANTHERPTHR33564:SF15PROTEIN, PUTATIVE-RELATEDcoord: 1..138
NoneNo IPR availablePANTHERPTHR33564TRANSMEMBRANE PROTEINcoord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0003169.1Pay0003169.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane