Pay0003052 (gene) Melon (Payzawat) v1

Overview


Name	Pay0003052
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	mRNA splicing factor Cwf21 domain containing protein
Location	chr03: 26434798 .. 26435474 (+)
RNA-Seq Expression	Pay0003052
Synteny	Pay0003052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAACCGTATTGGATTGCAGACTGCCAGAGGGTCTGGCACTAATGGTTATATCCAGACAAACAAGTTTTTTGTGAGGTCAAATGCTGAAAGCACCAGAGGATTTGAAGATCAGGCCACTGCTTGTCTTCTTAAGAAACCCAATAAAGACATTCTCGAGCATGACCGCAAGCGTCAGATTGAACTCAAACTCTTCATACTTGAAGACGAGCTCAGTGACCAAGGCTTTACAGAGAAGGAGATTTTTGGAAAGTTGAGGGAAGCTCGGGAGAATTTGGAAGCTGCTTCCTCTGCCATTCTTCTTGCCGATAAGAGGTATGATGTTCACTCGATCATTTTGTGGGTTTGATACACAAAAGCTTGAAGAGATTGAATAATAAATTGCTGAATATTTGATAGATGGGAAGTCATTGAGATTTCCTTTTTATTCTGTTATTATAATCAGAAATTCTCAAATACCATTCTTTTGGTATTTAGTTTTTGTTAATTTAGTATACTAAATTTGTTTGGATTTCAGAAATTCTCAAATACCATTCTTTTGTTGGCATCCCTTGATTGAATAGGCTATCAGATACACATATTCATCAAATTGCTGCAAGAAAGGAGAAGCAGACGAAAACATTTAGAGCTGCTCTTGGGTTGGGTTCATTATTGGATGATGGCGAACTATGTTAA

mRNA sequence

ATGAATAACCGTATTGGATTGCAGACTGCCAGAGGGTCTGGCACTAATGGTTATATCCAGACAAACAAGTTTTTTGTGAGGTCAAATGCTGAAAGCACCAGAGGATTTGAAGATCAGGCCACTGCTTGTCTTCTTAAGAAACCCAATAAAGACATTCTCGAGCATGACCGCAAGCGTCAGATTGAACTCAAACTCTTCATACTTGAAGACGAGCTCAGTGACCAAGGCTTTACAGAGAAGGAGATTTTTGGAAAGTTGAGGGAAGCTCGGGAGAATTTGGAAGCTGCTTCCTCTGCCATTCTTCTTGCCGATAAGAGGCTATCAGATACACATATTCATCAAATTGCTGCAAGAAAGGAGAAGCAGACGAAAACATTTAGAGCTGCTCTTGGGTTGGGTTCATTATTGGATGATGGCGAACTATGTTAA

Coding sequence (CDS)

ATGAATAACCGTATTGGATTGCAGACTGCCAGAGGGTCTGGCACTAATGGTTATATCCAGACAAACAAGTTTTTTGTGAGGTCAAATGCTGAAAGCACCAGAGGATTTGAAGATCAGGCCACTGCTTGTCTTCTTAAGAAACCCAATAAAGACATTCTCGAGCATGACCGCAAGCGTCAGATTGAACTCAAACTCTTCATACTTGAAGACGAGCTCAGTGACCAAGGCTTTACAGAGAAGGAGATTTTTGGAAAGTTGAGGGAAGCTCGGGAGAATTTGGAAGCTGCTTCCTCTGCCATTCTTCTTGCCGATAAGAGGCTATCAGATACACATATTCATCAAATTGCTGCAAGAAAGGAGAAGCAGACGAAAACATTTAGAGCTGCTCTTGGGTTGGGTTCATTATTGGATGATGGCGAACTATGTTAA

Protein sequence

MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKEKQTKTFRAALGLGSLLDDGELC

Homology

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BLAST of Pay0003052 vs. ExPASy Swiss-Prot
Match: Q9UQ35 (Serine/arginine repetitive matrix protein 2 OS=Homo sapiens OX=9606 GN=SRRM2 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.0e-15
Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFV---RSNAESTRGFED--QATACLLKKPNKDILEH 60
           M N IGL T RGSGTNGY+Q N   V   R      +G E+  +  A L+K+PN DIL+H
Sbjct: 1   MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRRLEAALVKRPNPDILDH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREAR----ENLEAASSAILLADKRLSDTH 120
           +RKR++EL+   LE+ + +QG+ E++I  K+   R    E             +R + T 
Sbjct: 61  ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPAVTE 120

Query: 121 IHQIAARKEKQTKTFRAALGLGSLLDDG 140
            HQ+A   EK+ +  RAA G+     DG
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDG 148

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BLAST of Pay0003052 vs. ExPASy Swiss-Prot
Match: Q8BTI8 (Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-15
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQ-----ATACLLKKPNKDILEH 60
           M N IGL T RGSGTNGY+Q N   VR        ++ +       A L+K+PN DIL+H
Sbjct: 1   MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRHLEAALVKRPNPDILDH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREAR----ENLEAASSAILLADKRLSDTH 120
           +RKR++EL+   LE+ + +QG+ E++I  K+   R    E      +      +R   T 
Sbjct: 61  ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGAKEETPGQRPVVTE 120

Query: 121 IHQIAARKEKQTKTFRAALGLGSLLDDG 140
            HQ+A   EK+ +  RAA G+     DG
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDG 148

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BLAST of Pay0003052 vs. ExPASy Swiss-Prot
Match: Q7RYH7 (Pre-mRNA-splicing factor cwc-21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cwc-21 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.2e-13
Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTN--KFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRK 60
           M++ +GL T RGSGT+GY+Q N   F  R N +S    +  +     ++P+K +LEHDRK
Sbjct: 1   MSDNVGLSTPRGSGTSGYVQRNLAHFRPRDNYQSYPPKDFDSLKHQPRQPDKGLLEHDRK 60

Query: 61  RQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA-------ASSAILLADKRLSDTH 120
           R++E+K+F L D+L ++G  E EI  +  E R  L A       +  A     K L    
Sbjct: 61  REVEVKVFELRDKLEEEGVEEDEIETRCDELRRKLLAEMERNQNSRGAPTGPRKNLKMHQ 120

Query: 121 IHQIAARKEKQTKTFRAALGLGSLLDDG 140
           +H++A  K K+++  R AL +     +G
Sbjct: 121 VHELADAKIKESERLRQALKISRDYQEG 148

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BLAST of Pay0003052 vs. ExPASy Swiss-Prot
Match: Q4IB70 (Pre-mRNA-splicing factor CWC21 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=CWC21 PE=3 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 46/143 (32.17%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFED-QATACLLKKPNKDILEHDRKR 60
           M++ +GL T RGSGT+GY+Q N   ++         +D  +     ++P+K ILEHDRKR
Sbjct: 1   MSDNVGLNTPRGSGTSGYVQRNLAHIKPRDYGAPYPKDLDSLRHKQRQPDKGILEHDRKR 60

Query: 61  QIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLA---DKRLSDTHIHQIA 120
           ++E+K+F L D+L ++   E EI  +  E R+ L A  +         K      +H++A
Sbjct: 61  EVEVKVFDLRDKLEEEEVDEDEIDKRCDELRQKLLAEMNLGRRGGGPKKSFKQHQVHEMA 120

Query: 121 ARKEKQTKTFRAALGLGSLLDDG 140
             K K+++  R AL + +  ++G
Sbjct: 121 DAKIKESERLRKALKISADYEEG 143

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BLAST of Pay0003052 vs. ExPASy Swiss-Prot
Match: P0CM95 (Pre-mRNA-splicing factor CWC21 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CWC21 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.7e-11
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRG----------FEDQATACLLKKPNK 60
           M   +GL TARGSGTNGY+  N   +R       G           E  +   + + P++
Sbjct: 1   MYGNVGLATARGSGTNGYVTRNTAHLRIREGPPGGQPYGSGYDALLESVSKPPIHRAPDQ 60

Query: 61  DILEHDRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDT 120
            ILEH+RKR++E+K+  L DEL ++G  E +I  +  + R+ L A    +     R  DT
Sbjct: 61  GILEHERKRRVEVKVMELRDELEEKGMEEDDIEEECSKLRQKLTAQPEQL---GGRGLDT 120

Query: 121 HIHQIAARKEKQTKTFRAALGLGSLLDDG 140
             H +AA KE +    + ALG+    ++G
Sbjct: 121 --HSLAAAKEIEMSRLQRALGVSVNHEEG 144

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BLAST of Pay0003052 vs. ExPASy TrEMBL
Match: A0A1S4DVI6 (pre-mRNA-splicing factor cwc-21-like OS=Cucumis melo OX=3656 GN=LOC103488249 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60
           MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ
Sbjct: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60

Query: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE 120
           IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE
Sbjct: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE 120

Query: 121 KQTKTFRAALGLGSLLDDGELC 143
           KQTKTFRAALGLGSLLDDGELC
Sbjct: 121 KQTKTFRAALGLGSLLDDGELC 142

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BLAST of Pay0003052 vs. ExPASy TrEMBL
Match: A0A5A7VCH8 (Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003050 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.7e-49
Identity = 109/114 (95.61%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60
           MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ
Sbjct: 100 MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 159

Query: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQ 115
           IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKR     IHQ
Sbjct: 160 IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKR---DFIHQ 210

[Close]

BLAST of Pay0003052 vs. ExPASy TrEMBL
Match: A0A5A7VCH8 (Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003050 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47
Identity = 117/153 (76.47%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGF-EDQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGF EDQ TA + KKPNKDILEH
Sbjct: 290 MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 349

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L+DQG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 350 DRKRQIELKLVILEDKLNDQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 409

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS LDDGE
Sbjct: 410 SDTQTHQIAARKEEQMKTLRAALGLGS-LDDGE 441

HSP 2 Score: 196.4 bits (498), Expect = 7.9e-47
Identity = 116/153 (75.82%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGF-EDQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGF EDQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L+DQG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 61  DRKRQIELKLVILEDKLNDQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS L DGE
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGS-LGDGE 152

[Close]

BLAST of Pay0003052 vs. ExPASy TrEMBL
Match: A0A0A0LQ00 (cwf21 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G379180 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.8e-46
Identity = 115/153 (75.16%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGF-EDQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGF EDQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L++QG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 61  DRKRQIELKLVILEDKLNEQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS LDD E
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGS-LDDSE 152

[Close]

BLAST of Pay0003052 vs. ExPASy TrEMBL
Match: A0A6J1BPI2 (protein starmaker OS=Momordica charantia OX=3673 GN=LOC111004608 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.1e-44
Identity = 108/154 (70.13%), Postives = 120/154 (77.92%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGF-EDQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGF EDQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAAS--------SAILLADKRL 120
           DRKRQIELKL ILED+L DQG+T++E+  KL+EAR+ LEAAS        SAI+L DKR+
Sbjct: 61  DRKRQIELKLVILEDKLIDQGYTDEEVSEKLKEARKTLEAASDQEEKGGPSAIVLLDKRI 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGEL 142
           SDT  HQIAARKE+Q KT RAALGLGSL D  +L
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGSLDDSEQL 154

[Close]

BLAST of Pay0003052 vs. NCBI nr
Match: XP_008445113.1 (PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo] >XP_016899996.1 PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo] >XP_016899997.1 PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60
           MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ
Sbjct: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60

Query: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE 120
           IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE
Sbjct: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE 120

Query: 121 KQTKTFRAALGLGSLLDDGELC 143
           KQTKTFRAALGLGSLLDDGELC
Sbjct: 121 KQTKTFRAALGLGSLLDDGELC 142

[Close]

BLAST of Pay0003052 vs. NCBI nr
Match: KAA0064984.1 (dentin sialophosphoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 205.3 bits (521), Expect = 3.5e-49
Identity = 109/114 (95.61%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60
           MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ
Sbjct: 100 MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 159

Query: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQ 115
           IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKR     IHQ
Sbjct: 160 IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKR---DFIHQ 210

[Close]

BLAST of Pay0003052 vs. NCBI nr
Match: XP_008445109.1 (PREDICTED: dentin sialophosphoprotein-like [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 116/153 (75.82%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGF-EDQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGF EDQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L+DQG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 61  DRKRQIELKLVILEDKLNDQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS L DGE
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGS-LGDGE 152

[Close]

BLAST of Pay0003052 vs. NCBI nr
Match: XP_004138875.1 (dentin sialophosphoprotein [Cucumis sativus] >KGN62887.1 hypothetical protein Csa_021873 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 3.6e-46
Identity = 115/153 (75.16%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGF-EDQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGF EDQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L++QG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 61  DRKRQIELKLVILEDKLNEQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS LDD E
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGS-LDDSE 152

[Close]

BLAST of Pay0003052 vs. NCBI nr
Match: XP_022131365.1 (protein starmaker [Momordica charantia] >XP_022131366.1 protein starmaker [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-43
Identity = 108/154 (70.13%), Postives = 120/154 (77.92%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGF-EDQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGF EDQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAAS--------SAILLADKRL 120
           DRKRQIELKL ILED+L DQG+T++E+  KL+EAR+ LEAAS        SAI+L DKR+
Sbjct: 61  DRKRQIELKLVILEDKLIDQGYTDEEVSEKLKEARKTLEAASDQEEKGGPSAIVLLDKRI 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGEL 142
           SDT  HQIAARKE+Q KT RAALGLGSL D  +L
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGSLDDSEQL 154

[Close]

BLAST of Pay0003052 vs. TAIR 10
Match: AT3G49601.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 151.4 bits (381), Expect = 5.6e-37
Identity = 88/139 (63.31%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN-----AESTRGFE-DQATACLLKKPNKDILE 60
           M N IGLQTARGSGTNGY+QTNKFFVR        +  +GFE D+ TA L KKPNK ILE
Sbjct: 1   MYNGIGLQTARGSGTNGYVQTNKFFVRPRNGGKPVKGGKGFEDDEGTAGLSKKPNKAILE 60

Query: 61  HDRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSA-ILLADKRLSDTHIH 120
           HDRKRQI LKL ILED+L+DQG+++ EI  KL EAR +LEAA++A    +D ++S+T  H
Sbjct: 61  HDRKRQIHLKLAILEDKLADQGYSDIEIAQKLEEARVSLEAAAAANEEESDSKVSNTQTH 120

Query: 121 QIAARKEKQTKTFRAALGL 133
           Q+AARKEKQ + FRAALGL
Sbjct: 121 QVAARKEKQMEAFRAALGL 139

The following BLAST results are available for this feature:

BLAST of Pay0003052 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UQ35	2.0e-15	37.84	Serine/arginine repetitive matrix protein 2 OS=Homo sapiens OX=9606 GN=SRRM2 PE=...	[more]
Q8BTI8	3.4e-15	36.49	Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE...	[more]
Q7RYH7	3.2e-13	34.46	Pre-mRNA-splicing factor cwc-21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR2...	[more]
Q4IB70	1.0e-11	32.17	Pre-mRNA-splicing factor CWC21 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 12...	[more]
P0CM95	6.7e-11	32.89	Pre-mRNA-splicing factor CWC21 OS=Cryptococcus neoformans var. neoformans seroty...	[more]

BLAST of Pay0003052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DVI6	1.0e-70	100.00	pre-mRNA-splicing factor cwc-21-like OS=Cucumis melo OX=3656 GN=LOC103488249 PE=...	[more]
A0A5A7VCH8	1.7e-49	95.61	Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7VCH8	1.2e-47	76.47	Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0LQ00	1.8e-46	75.16	cwf21 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G379180 PE=4 ...	[more]
A0A6J1BPI2	8.1e-44	70.13	protein starmaker OS=Momordica charantia OX=3673 GN=LOC111004608 PE=4 SV=1	[more]

BLAST of Pay0003052 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445113.1	2.1e-70	100.00	PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo] >XP_016899996.1 P...	[more]
KAA0064984.1	3.5e-49	95.61	dentin sialophosphoprotein-like [Cucumis melo var. makuwa]	[more]
XP_008445109.1	1.6e-46	75.82	PREDICTED: dentin sialophosphoprotein-like [Cucumis melo]	[more]
XP_004138875.1	3.6e-46	75.16	dentin sialophosphoprotein [Cucumis sativus] >KGN62887.1 hypothetical protein Cs...	[more]
XP_022131365.1	1.7e-43	70.13	protein starmaker [Momordica charantia] >XP_022131366.1 protein starmaker [Momor...	[more]

BLAST of Pay0003052 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49601.1	5.6e-37	63.31	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	GENE3D	6.10.140.420		coord: 53..97 e-value: 4.5E-5 score: 25.2
None	No IPR available	PANTHER	PTHR36562	SERINE/ARGININE REPETITIVE MATRIX 2	coord: 1..134
None	No IPR available	PANTHER	PTHR36562:SF5	SERINE/ARGININE REPETITIVE MATRIX 2	coord: 1..134
IPR013170	mRNA splicing factor Cwf21 domain	SMART	SM01115	cwf21_2	coord: 53..98 e-value: 8.3E-6 score: 35.3
IPR013170	mRNA splicing factor Cwf21 domain	PFAM	PF08312	cwf21	coord: 53..94 e-value: 1.5E-11 score: 44.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0003052.1	Pay0003052.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus