Pay0002893 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002893
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ATP synthase subunit a
Location	chr08: 23459682 .. 23460468 (+)
RNA-Seq Expression	Pay0002893
Synteny	Pay0002893

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATAGGAAACTTTTATTTCTTATTCACAAATCCATCTTTGTTTATGCTGCTAACTCTCAGTTCAGTCCTACTTCTGCTTCATTTTGTTACTAAAATGGAGGAGAAAACTCAGTACCAAATGCTTGGCAATCCTTGGTAAAGCTTATTTATGATTTTGTCCCGAACTTGGTAAATGAACAGACAGGTGGTCTTTCCGAAAATGTGAAAGAAAAGTTTTTCCCTCGCATCTCAGTCACTTTGACTTTTTGTTATTTCGTAATCCCCAGGGTATGATACCTTATAGCTTCACATTGACAAGTCATTTTCTCATTACTTTGGGTCTCTCGTTTTCTCTTTTTATTGCTATTACTATAGTGGGATTTCAAAGAAATTGGCTTCATTTTTTCAGTTTTTTATTACCCGCAAGAGTTTCACTACCATTAGCACCTTTTTTAATACTCCTTGAGCTAATCCCTTATTGTTTTCGCGCATTAAGCTCATGAATACATTTATTTGCTAATATCATGGCCGGTCATAGTTCAGTAAAGATTTTAAGTGGGTCTGCTTAGACTATGCTATGTATGAATAATCTACTCTATTTCATAAGAGATCCTGGCCCTTTATTTATTGTTCTTGCATTAACCGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATCTTTCTACGATCTCAACCTGTATTTACTTGAATGATGCTACAAATCTCCATAAAAAATGGTTATTTATTTATAATCGACAAAGCGAGCTCCGTAAGGCGCAAAGCGAAACGACTGTTCAGTAA

mRNA sequence

ATGCATATAGGAAACTTTTATTTCTTATTCACAAATCCATCTTTGTTTATGCTGCTAACTCTCAGTTCAGTCCTACTTCTGCTTCATTTTCTTATTTATGATTTTGTCCCGAACTTGGTAAATGAACAGACAGGTGGTCTTTCCGAAAATGTGAAAGAAAAGTTTTTCCCTCGCATCTCAGGTATGATACCTTATAGCTTCACATTGACAAGTCATTTTCTCATTACTTTGGGTCTCTCGTTTTCTCTTTTTATTGCTATTACTATAGTGGGATTTCAAAGAAATTGGCTTCATTTTTTCAGTTTTTTATTACCCGCAAGAGTTTCACTACCATTAGCACCTTTTTTAATACTCCTTGAGCTAATCCCTTATTATCCTGGCCCTTTATTTATTGTTCTTGCATTAACCGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATCTTTCTACGATCTCAACCTGTATTTACTTGAATGATGCTACAAATCTCCATAAAAAATGGTTATTTATTTATAATCGACAAAGCGAGCTCCGTAAGGCGCAAAGCGAAACGACTGTTCAGTAA

Coding sequence (CDS)

ATGCATATAGGAAACTTTTATTTCTTATTCACAAATCCATCTTTGTTTATGCTGCTAACTCTCAGTTCAGTCCTACTTCTGCTTCATTTTCTTATTTATGATTTTGTCCCGAACTTGGTAAATGAACAGACAGGTGGTCTTTCCGAAAATGTGAAAGAAAAGTTTTTCCCTCGCATCTCAGGTATGATACCTTATAGCTTCACATTGACAAGTCATTTTCTCATTACTTTGGGTCTCTCGTTTTCTCTTTTTATTGCTATTACTATAGTGGGATTTCAAAGAAATTGGCTTCATTTTTTCAGTTTTTTATTACCCGCAAGAGTTTCACTACCATTAGCACCTTTTTTAATACTCCTTGAGCTAATCCCTTATTATCCTGGCCCTTTATTTATTGTTCTTGCATTAACCGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATCTTTCTACGATCTCAACCTGTATTTACTTGAATGATGCTACAAATCTCCATAAAAAATGGTTATTTATTTATAATCGACAAAGCGAGCTCCGTAAGGCGCAAAGCGAAACGACTGTTCAGTAA

Protein sequence

MHIGNFYFLFTNPSLFMLLTLSSVLLLLHFLIYDFVPNLVNEQTGGLSENVKEKFFPRISGMIPYSFTLTSHFLITLGLSFSLFIAITIVGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYYPGPLFIVLALTGLELGVAISQAHLSTISTCIYLNDATNLHKKWLFIYNRQSELRKAQSETTVQ

Homology

[Close]

BLAST of Pay0002893 vs. ExPASy Swiss-Prot
Match: Q04654 (ATP synthase subunit a OS=Vicia faba OX=3906 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.2e-57
Identity = 143/248 (57.66%), Postives = 153/248 (61.69%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           M IG+ YF FTNPSLFMLLTLS VLLL+HF                   LIYDFVPNLVN
Sbjct: 44  MKIGDLYFSFTNPSLFMLLTLSLVLLLVHFVTKKGGGKSVPNAWQSLVELIYDFVPNLVN 103

Query: 61  EQTGGLSENVKEKFFP------------RISGMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK++FFP             + GMIPYSFT+TSHFLITLGLSFS+FI ITI
Sbjct: 104 EQIGGLSGNVKQQFFPCIFVTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITI 163

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 174
           VGFQRN LHF SFLLPA V LPLAPFL+LLELI Y                         
Sbjct: 164 VGFQRNGLHFLSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKIL 223

[Close]

BLAST of Pay0002893 vs. ExPASy Swiss-Prot
Match: P05499 (ATP synthase subunit a OS=Nicotiana tabacum OX=4097 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-54
Identity = 140/252 (55.56%), Postives = 150/252 (59.52%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           M IGN YF FTNPSLFMLLTLS VLLL++F                   LIYDFV N VN
Sbjct: 144 MKIGNLYFSFTNPSLFMLLTLSLVLLLVYFVTKKGGGNSVPNAWQSLVELIYDFVLNPVN 203

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KF PRIS            GMIPYSFT+TSHFLITLGLSFS+FI ITI
Sbjct: 204 EQIGGLSGNVKQKFSPRISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITI 263

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 179
           VGFQ+N LHF SFLLPA V LPLAPFL+LLELIPY                         
Sbjct: 264 VGFQKNGLHFLSFLLPAGVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKIL 323

[Close]

BLAST of Pay0002893 vs. ExPASy Swiss-Prot
Match: P68526 (ATP synthase subunit a OS=Triticum timopheevii OX=4570 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-51
Identity = 133/244 (54.51%), Postives = 146/244 (59.84%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLL-------------------LHFLIYDFVPNLVN 60
           +H+GNFY  FTN  L+MLLT+  V+ L                   L  LIYDFV NLVN
Sbjct: 141 LHVGNFYLSFTNEVLYMLLTVVLVVFLFFVVTKKGGGKSVPNAWQSLVELIYDFVLNLVN 200

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIP+SFT+TSHFLITL LSFS+FI ITI
Sbjct: 201 EQIGGLSGNVKQKFFPRISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITI 260

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 171
           VGFQR+ LHFFSFLLPA V LPLAPFL+LLELI Y                         
Sbjct: 261 VGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKIL 320

[Close]

BLAST of Pay0002893 vs. ExPASy Swiss-Prot
Match: P68527 (ATP synthase subunit a OS=Triticum aestivum OX=4565 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-51
Identity = 133/244 (54.51%), Postives = 146/244 (59.84%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLL-------------------LHFLIYDFVPNLVN 60
           +H+GNFY  FTN  L+MLLT+  V+ L                   L  LIYDFV NLVN
Sbjct: 141 LHVGNFYLSFTNEVLYMLLTVVLVVFLFFVVTKKGGGKSVPNAWQSLVELIYDFVLNLVN 200

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIP+SFT+TSHFLITL LSFS+FI ITI
Sbjct: 201 EQIGGLSGNVKQKFFPRISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITI 260

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 171
           VGFQR+ LHFFSFLLPA V LPLAPFL+LLELI Y                         
Sbjct: 261 VGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKIL 320

[Close]

BLAST of Pay0002893 vs. ExPASy Swiss-Prot
Match: P05500 (ATP synthase subunit a OS=Oenothera berteroana OX=3950 GN=ATP6 PE=2 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-51
Identity = 133/239 (55.65%), Postives = 143/239 (59.83%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           M+IGN YF FTN SLFMLLTLS VLLL++F                   LIYDFV NLVN
Sbjct: 43  MNIGNLYFSFTNSSLFMLLTLSLVLLLVNFVTKKGGGNLVPNAWQSLVELIYDFVLNLVN 102

Query: 61  EQTGGLSENVKEKFFP------------RISGMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFP             + GMIPYSFT+TSHFLITLGLSFS+FI ITI
Sbjct: 103 EQIGGLSGNVKQKFFPCILVTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITI 162

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 166
           VGFQRN LHF SFLLPA V LPLAPFL+LLELI Y                         
Sbjct: 163 VGFQRNGLHFLSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKIL 222

[Close]

BLAST of Pay0002893 vs. ExPASy TrEMBL
Match: G3EU41 (ATP synthase subunit a OS=Cucumis melo subsp. melo OX=412675 GN=atp6 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.7e-61
Identity = 153/250 (61.20%), Postives = 162/250 (64.80%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGNFYF FTNPSLFMLLTLS VLLLLHF                   LIYDFVPNLVN
Sbjct: 26  MHIGNFYFSFTNPSLFMLLTLSLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVN 85

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 86  EQIGGLSGNVKQKFFPRISVTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 145

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 176
           VGFQRN LHFFSFLLPA V LPLAPFL+LLELIP+                         
Sbjct: 146 VGFQRNGLHFFSFLLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 205

[Close]

BLAST of Pay0002893 vs. ExPASy TrEMBL
Match: A0A3S5HPI7 (ATP synthase subunit a OS=Cucumis melo var. momordica OX=2034244 GN=atp6 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.7e-61
Identity = 153/250 (61.20%), Postives = 162/250 (64.80%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGNFYF FTNPSLFMLLTLS VLLLLHF                   LIYDFVPNLVN
Sbjct: 26  MHIGNFYFSFTNPSLFMLLTLSLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVN 85

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 86  EQIGGLSGNVKQKFFPRISVTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 145

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 176
           VGFQRN LHFFSFLLPA V LPLAPFL+LLELIP+                         
Sbjct: 146 VGFQRNGLHFFSFLLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 205

[Close]

BLAST of Pay0002893 vs. ExPASy TrEMBL
Match: G3EIZ6 (ATP synthase subunit a OS=Cucumis sativus OX=3659 GN=atp6 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-59
Identity = 148/239 (61.92%), Postives = 154/239 (64.44%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGN+YF FTNPSLFMLLTLS VLLLLHF                   LIYDFVPNLVN
Sbjct: 17  MHIGNYYFSFTNPSLFMLLTLSLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVN 76

Query: 61  EQTGGLSENVKEKFFPRI------------SGMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRI             GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 77  EQIGGLSGNVKQKFFPRILVTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 136

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 166
           VGFQRN LHFFSFLLPA V LPLAPFL+LLELIP+                         
Sbjct: 137 VGFQRNGLHFFSFLLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 196

[Close]

BLAST of Pay0002893 vs. ExPASy TrEMBL
Match: A0A7D6C7D9 (ATP synthase subunit a OS=Luffa acutangula OX=56866 GN=atp6 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.0e-58
Identity = 149/250 (59.60%), Postives = 160/250 (64.00%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           M+IGNFYF FTNPSLFMLLTLS VLLL+HF                   LIYDFVPNLVN
Sbjct: 19  MNIGNFYFSFTNPSLFMLLTLSLVLLLVHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVN 78

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 79  EQIGGLSGNVKQKFFPRISVTFTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 138

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 176
           VGFQRN LHF SF LPA V LPLAPFL+LLELIP+                         
Sbjct: 139 VGFQRNGLHFLSFSLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 198

[Close]

BLAST of Pay0002893 vs. ExPASy TrEMBL
Match: B6VJU9 (ATP synthase subunit a OS=Vitis vinifera OX=29760 GN=atp6 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.4e-58
Identity = 144/247 (58.30%), Postives = 156/247 (63.16%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHFL-------------------IYDFVPNLVN 60
           M+IGN YF FTNPSLFMLLTLS VLLL+HF+                   I+DFVPN VN
Sbjct: 142 MNIGNLYFSFTNPSLFMLLTLSLVLLLVHFVTKNGGGNPVPNAWQSLVEFIHDFVPNPVN 201

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFS+FI ITI
Sbjct: 202 EQIGGLSGNVKQKFFPRISVTFTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSIFIGITI 261

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 174
           VGFQRN LHF SF LPA V LPLAPFL+LLELIP+                         
Sbjct: 262 VGFQRNGLHFLSFSLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 321

[Close]

BLAST of Pay0002893 vs. NCBI nr
Match: AEN56130.1 (ATPase subunit 6 [Cucumis melo subsp. melo] >AZP40292.1 ATPase subunit 6 [Cucumis melo var. momordica])

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60
Identity = 153/250 (61.20%), Postives = 162/250 (64.80%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGNFYF FTNPSLFMLLTLS VLLLLHF                   LIYDFVPNLVN
Sbjct: 26  MHIGNFYFSFTNPSLFMLLTLSLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVN 85

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 86  EQIGGLSGNVKQKFFPRISVTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 145

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 176
           VGFQRN LHFFSFLLPA V LPLAPFL+LLELIP+                         
Sbjct: 146 VGFQRNGLHFFSFLLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 205

[Close]

BLAST of Pay0002893 vs. NCBI nr
Match: YP_004849344.1 (ATPase subunit 6 [Cucumis sativus] >ADZ10771.1 ATPase subunit 6 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-59
Identity = 148/239 (61.92%), Postives = 154/239 (64.44%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGN+YF FTNPSLFMLLTLS VLLLLHF                   LIYDFVPNLVN
Sbjct: 17  MHIGNYYFSFTNPSLFMLLTLSLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVN 76

Query: 61  EQTGGLSENVKEKFFPRI------------SGMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRI             GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 77  EQIGGLSGNVKQKFFPRILVTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 136

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 166
           VGFQRN LHFFSFLLPA V LPLAPFL+LLELIP+                         
Sbjct: 137 VGFQRNGLHFFSFLLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 196

[Close]

BLAST of Pay0002893 vs. NCBI nr
Match: YP_009913611.1 (ATPase subunit 6 [Luffa acutangula] >QLJ93046.1 ATPase subunit 6 [Luffa acutangula])

HSP 1 Score: 235.3 bits (599), Expect = 4.2e-58
Identity = 149/250 (59.60%), Postives = 160/250 (64.00%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           M+IGNFYF FTNPSLFMLLTLS VLLL+HF                   LIYDFVPNLVN
Sbjct: 19  MNIGNFYFSFTNPSLFMLLTLSLVLLLVHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVN 78

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 79  EQIGGLSGNVKQKFFPRISVTFTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 138

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 176
           VGFQRN LHF SF LPA V LPLAPFL+LLELIP+                         
Sbjct: 139 VGFQRNGLHFLSFSLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 198

[Close]

BLAST of Pay0002893 vs. NCBI nr
Match: YP_002608361.1 (ATP synthase F0 subunit 6 [Vitis vinifera] >ACS15241.1 ATP synthase F0 subunit 6 [Vitis vinifera] >CAQ77596.1 ATP synthase F0 subunit 6 [Vitis vinifera] >VZL70166.1 atp6 [Vitis riparia x Vitis cinerea])

HSP 1 Score: 234.6 bits (597), Expect = 7.1e-58
Identity = 144/247 (58.30%), Postives = 156/247 (63.16%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHFL-------------------IYDFVPNLVN 60
           M+IGN YF FTNPSLFMLLTLS VLLL+HF+                   I+DFVPN VN
Sbjct: 142 MNIGNLYFSFTNPSLFMLLTLSLVLLLVHFVTKNGGGNPVPNAWQSLVEFIHDFVPNPVN 201

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFS+FI ITI
Sbjct: 202 EQIGGLSGNVKQKFFPRISVTFTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSIFIGITI 261

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 174
           VGFQRN LHF SF LPA V LPLAPFL+LLELIP+                         
Sbjct: 262 VGFQRNGLHFLSFSLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 321

[Close]

BLAST of Pay0002893 vs. NCBI nr
Match: YP_010131375.1 (ATP synthase F0 subunit 6 [Aegiceras corniculatum] >QPZ76243.1 ATP synthase F0 subunit 6 [Aegiceras corniculatum])

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 145/246 (58.94%), Postives = 155/246 (63.01%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           M+IGNFYF FTNPSLFMLLTLS VLLL+HF                   LIYDFVPN VN
Sbjct: 158 MNIGNFYFSFTNPSLFMLLTLSLVLLLVHFVTKKGGGNSVPNAWQSLVELIYDFVPNPVN 217

Query: 61  EQTGGLSENVKEKFFPRIS------------GMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+KFFPRIS            GMIPYSFT+TSHFLITLGLSFSLFI ITI
Sbjct: 218 EQIGGLSGNVKQKFFPRISVTFTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITI 277

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPYY------------------------ 173
           VGFQ+N LHF SFLLPA V LPLAPFL+LLELIP+                         
Sbjct: 278 VGFQKNGLHFLSFLLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 337

[Close]

BLAST of Pay0002893 vs. TAIR 10
Match: AT2G07741.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 204.1 bits (518), Expect = 9.6e-53
Identity = 132/239 (55.23%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGNFYF FTNPSLFMLLTLS  LLL+HF                   L+YDFV NLV 
Sbjct: 147 MHIGNFYFSFTNPSLFMLLTLSFFLLLIHFVTKKGGGNLVPNAWQSLVELLYDFVLNLVK 206

Query: 61  EQTGGLSENVKEKFFP------------RISGMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+ FFP             + GMIPYSFT+TSHFLITL LSFS+FI ITI
Sbjct: 207 EQIGGLSGNVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITI 266

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPY------------------------- 166
           VGFQR+ LHFFSFLLPA V LPLAPFL+LLELI Y                         
Sbjct: 267 VGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKIL 326

[Close]

BLAST of Pay0002893 vs. TAIR 10
Match: ATMG01170.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 204.1 bits (518), Expect = 9.6e-53
Identity = 132/239 (55.23%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGNFYF FTNPSLFMLLTLS  LLL+HF                   L+YDFV NLV 
Sbjct: 111 MHIGNFYFSFTNPSLFMLLTLSFFLLLIHFVTKKGGGNLVPNAWQSLVELLYDFVLNLVK 170

Query: 61  EQTGGLSENVKEKFFP------------RISGMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+ FFP             + GMIPYSFT+TSHFLITL LSFS+FI ITI
Sbjct: 171 EQIGGLSGNVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITI 230

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPY------------------------- 166
           VGFQR+ LHFFSFLLPA V LPLAPFL+LLELI Y                         
Sbjct: 231 VGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKIL 290

[Close]

BLAST of Pay0002893 vs. TAIR 10
Match: ATMG00410.1 (ATPase subunit 6-1 )

HSP 1 Score: 204.1 bits (518), Expect = 9.6e-53
Identity = 132/239 (55.23%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 1   MHIGNFYFLFTNPSLFMLLTLSSVLLLLHF-------------------LIYDFVPNLVN 60
           MHIGNFYF FTNPSLFMLLTLS  LLL+HF                   L+YDFV NLV 
Sbjct: 147 MHIGNFYFSFTNPSLFMLLTLSFFLLLIHFVTKKGGGNLVPNAWQSLVELLYDFVLNLVK 206

Query: 61  EQTGGLSENVKEKFFP------------RISGMIPYSFTLTSHFLITLGLSFSLFIAITI 120
           EQ GGLS NVK+ FFP             + GMIPYSFT+TSHFLITL LSFS+FI ITI
Sbjct: 207 EQIGGLSGNVKQMFFPCILVTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITI 266

Query: 121 VGFQRNWLHFFSFLLPARVSLPLAPFLILLELIPY------------------------- 166
           VGFQR+ LHFFSFLLPA V LPLAPFL+LLELI Y                         
Sbjct: 267 VGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKIL 326

The following BLAST results are available for this feature:

BLAST of Pay0002893 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04654	8.2e-57	57.66	ATP synthase subunit a OS=Vicia faba OX=3906 GN=ATP6 PE=3 SV=1	[more]
P05499	2.2e-54	55.56	ATP synthase subunit a OS=Nicotiana tabacum OX=4097 GN=ATP6 PE=3 SV=1	[more]
P68526	3.0e-51	54.51	ATP synthase subunit a OS=Triticum timopheevii OX=4570 GN=ATP6 PE=3 SV=1	[more]
P68527	3.0e-51	54.51	ATP synthase subunit a OS=Triticum aestivum OX=4565 GN=ATP6 PE=3 SV=1	[more]
P05500	5.1e-51	55.65	ATP synthase subunit a OS=Oenothera berteroana OX=3950 GN=ATP6 PE=2 SV=2	[more]

BLAST of Pay0002893 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G3EU41	5.7e-61	61.20	ATP synthase subunit a OS=Cucumis melo subsp. melo OX=412675 GN=atp6 PE=3 SV=1	[more]
A0A3S5HPI7	5.7e-61	61.20	ATP synthase subunit a OS=Cucumis melo var. momordica OX=2034244 GN=atp6 PE=3 SV...	[more]
G3EIZ6	1.4e-59	61.92	ATP synthase subunit a OS=Cucumis sativus OX=3659 GN=atp6 PE=3 SV=1	[more]
A0A7D6C7D9	2.0e-58	59.60	ATP synthase subunit a OS=Luffa acutangula OX=56866 GN=atp6 PE=3 SV=1	[more]
B6VJU9	3.4e-58	58.30	ATP synthase subunit a OS=Vitis vinifera OX=29760 GN=atp6 PE=3 SV=1	[more]

BLAST of Pay0002893 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56130.1	1.2e-60	61.20	ATPase subunit 6 [Cucumis melo subsp. melo] >AZP40292.1 ATPase subunit 6 [Cucumi...	[more]
YP_004849344.1	2.9e-59	61.92	ATPase subunit 6 [Cucumis sativus] >ADZ10771.1 ATPase subunit 6 [Cucumis sativus...	[more]
YP_009913611.1	4.2e-58	59.60	ATPase subunit 6 [Luffa acutangula] >QLJ93046.1 ATPase subunit 6 [Luffa acutangu...	[more]
YP_002608361.1	7.1e-58	58.30	ATP synthase F0 subunit 6 [Vitis vinifera] >ACS15241.1 ATP synthase F0 subunit 6...	[more]
YP_010131375.1	1.3e-56	58.94	ATP synthase F0 subunit 6 [Aegiceras corniculatum] >QPZ76243.1 ATP synthase F0 s...	[more]

BLAST of Pay0002893 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07741.1	9.6e-53	55.23	ATPase, F0 complex, subunit A protein	[more]
ATMG01170.1	9.6e-53	55.23	ATPase, F0 complex, subunit A protein	[more]
ATMG00410.1	9.6e-53	55.23	ATPase subunit 6-1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035908	ATP synthase, F0 complex, subunit A superfamily	GENE3D	1.20.120.220	ATP synthase, F0 complex, subunit A	coord: 6..129 e-value: 7.1E-7 score: 31.5
IPR035908	ATP synthase, F0 complex, subunit A superfamily	SUPERFAMILY	81336	F1F0 ATP synthase subunit A	coord: 58..158
IPR045083	ATP synthase, F0 complex, subunit A, bacterial/mitochondria	PANTHER	PTHR11410	ATP SYNTHASE SUBUNIT A	coord: 126..165 coord: 31..124
None	No IPR available	CDD	cd00310	ATP-synt_Fo_a_6	coord: 59..159 e-value: 2.71977E-17 score: 72.8172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002893.1	Pay0002893.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity