Pay0002884 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002884
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 17809105 .. 17813193 (+)
RNA-Seq Expression	Pay0002884
Synteny	Pay0002884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACAACAATTTAGTTCCCTTCCAAGTACCTCGACTTACGAAAGAAAATTATAGTAGTTGGTGTATTCGAATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGCTCAACGAGAAGCTTTACAAAATACAAGAAAAAAATATCAAAAGGCTCTCACCATCATTCATCAAGCCATTGATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGCAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGCCTTCAAAAATTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATCAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTAGATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAGTCAAAGTTGAAATTAAAAGACAAGGAAGGCAGCCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTACGGTCAAAGAAAATTTTATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTTGGGAAAGATCAAATAATGACAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTATTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGTTGAGAAAGATGAAAAAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGGAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCGTTGAACTTGATGAATCTGTTGGTGGCGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGAAAAGGTAAGATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTGGAGAGCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGCAGAAAATGGAATCCGTCGCCCTATGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTTTATTTGGTGACAGTGAACCTTTGAATTTTGAAGAAGCTTCGCAAAATGATAAATGGAAGATTGCTATGGATGAAAAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAGAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCGAAAGAGCACTAGTGGATATGTTTTCTTCATTGGCAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAAGAAATTTGTTAAAGACAGTTGGAATTTTGCAAGAAGATCCAACTGTGATTCATATAGACAATAAGTCAACAATTGCTTTAGCAAAGAATCCTGTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTTCATCAGAGATTGCATTTCAAGGAAGGAAGTTCAAGTTGAATATGTGAAGACTGAAGATCAAATTGCAGATATTTTTACGAAGCCACTCAAAGTTAATGTGTTTAACAACTTAAGAACTTTGCTTGGAGTTTTTCAAAACAAAAAACATGTTTAA

mRNA sequence

ATGGCAAACAACAATTTAGTTCCCTTCCAAGTACCTCGACTTACGAAAGAAAATTATAGTAGTTGGTGTATTCGAATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGCTCAACGAGAAGCTTTACAAAATACAAGAAAAAAATATCAAAAGGCTCTCACCATCATTCATCAAGCCATTGATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGCAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGCCTTCAAAAATTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATCAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTAGATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAGTCAAAGTTGAAATTAAAAGACAAGGAAGGCAGCCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTACGGTCAAAGAAAATTTTATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTTGGGAAAGATCAAATAATGACAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTATTCTTGGGAATGCAGAAATAGAATGAAAAAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGGAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCGTTGAACTTGATGAATCTGTTGGTGGCGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGAAAAGGTAAGATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTGGAGAGCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGCAGAAAATGGAATCCGTCGCCCTATGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTTTATTTGGTGACAGTGAACCTTTGAATTTTGAAGAAGCTTCGCAAAATGATAAATGGAAGATTGCTATGGATGAAAAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAGAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCGAAAGAGCACTAGTGGATATGTTTTCTTCATTGGCAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAAGAAATTTGTTAAAGACAGTTGGAATTTTGCAAGAAGATCCAACTGTGATTCATATAGACAATAAGTCAACAATTGCTTTAGCAAAGAATCCTGTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTTCATCAGAGATTGCATTTCAAGGAAGGAAGTTCAAGTTGAATATGTGAAGACTGAAGATCAAATTGCAGATATTTTTACGAAGCCACTCAAAGTTAATGTGTTTAACAACTTAAGAACTTTGCTTGGAGTTTTTCAAAACAAAAAACATGTTTAA

Coding sequence (CDS)

ATGGCAAACAACAATTTAGTTCCCTTCCAAGTACCTCGACTTACGAAAGAAAATTATAGTAGTTGGTGTATTCGAATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGCTCAACGAGAAGCTTTACAAAATACAAGAAAAAAATATCAAAAGGCTCTCACCATCATTCATCAAGCCATTGATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGCAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGCCTTCAAAAATTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATCAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTAGATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAGTCAAAGTTGAAATTAAAAGACAAGGAAGGCAGCCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTACGGTCAAAGAAAATTTTATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTTGGGAAAGATCAAATAATGACAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTATTCTTGGGAATGCAGAAATAGAATGAAAAAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGGAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCGTTGAACTTGATGAATCTGTTGGTGGCGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGAAAAGGTAAGATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTGGAGAGCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGCAGAAAATGGAATCCGTCGCCCTATGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTTTATTTGGTGACAGTGAACCTTTGAATTTTGAAGAAGCTTCGCAAAATGATAAATGGAAGATTGCTATGGATGAAAAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAGAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCGAAAGAGCACTAGTGGATATGTTTTCTTCATTGGCAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAAGAAATTTGTTAAAGACAGTTGGAATTTTGCAAGAAGATCCAACTGTGATTCATATAGACAATAAGTCAACAATTGCTTTAGCAAAGAATCCTGTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTTCATCAGAGATTGCATTTCAAGGAAGGAAGTTCAAGTTGAATATGTGAAGACTGAAGATCAAATTGCAGATATTTTTACGAAGCCACTCAAAGTTAATGTGTTTAACAACTTAAGAACTTTGCTTGGAGTTTTTCAAAACAAAAAACATGTTTAA

Protein sequence

MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRMKKSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV

Homology

[Close]

BLAST of Pay0002884 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 3.7e-204
Identity = 469/1403 (33.43%), Postives = 738/1403 (52.60%), Query Frame = 0


Query: 7    VPFQVPRLTKEN-YSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRK 66
            V ++V +   +N +S+W  RM+ LL  Q +  ++    ++P++  A + A  +       
Sbjct: 4    VKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLD------- 63

Query: 67   KYQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLH 126
              ++A + I   + D+    I    TA   W  LE+ Y       K+ L+K      +LH
Sbjct: 64   --ERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKK---QLYALH 123

Query: 127  MKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLST 186
            M E  +   + +    ++ ++   G  I +E     +L SL   ++ +   I   K  +T
Sbjct: 124  MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TT 183

Query: 187  MSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDF 246
            + +  +  +L  + EK+ KK +   + L                   GRGR         
Sbjct: 184  IELKDVTSALLLN-EKMRKKPENQGQALI----------------TEGRGRS-------- 243

Query: 247  KDRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGH 306
                         Y+ +SN          +Y RS   R  +  R   R   CYNC++ GH
Sbjct: 244  -------------YQRSSN----------NYGRSG-ARGKSKNRSKSRVRNCYNCNQPGH 303

Query: 307  YSWECRNRMKKSGDSS-----------------LFLACKGAETC-----ENSAWYLDSGA 366
            +  +C N  K  G++S                 + L     E C       S W +D+ A
Sbjct: 304  FKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAA 363

Query: 367  SNHMCGSKSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMK 426
            S+H    + +F        G +  G+ +   + G G I I    G    + +V +VP+++
Sbjct: 364  SHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLR 423

Query: 427  NNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCL 486
             N++S   L   GY     +    +      +IAK  + +  ++  N   ++ Q   +  
Sbjct: 424  MNLISGIALDRDGYESYFANQKWRLTKG-SLVIAK-GVARGTLYRTN--AEICQGELNAA 483

Query: 487  KDPNWI--WHLRFGHLNFDGLRLLARKNMVKGLPYVK-LPDQLCEGCLHGKQSRKSFPQE 546
            +D   +  WH R GH++  GL++LA+K+++    Y K    + C+ CL GKQ R SF Q 
Sbjct: 484  QDEISVDLWHKRMGHMSEKGLQILAKKSLIS---YAKGTTVKPCDYCLFGKQHRVSF-QT 543

Query: 547  SSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRF 606
            SS R    L+LV++D+CGP++  S G N YF+ FIDD SRK WVY +K K +VF +F++F
Sbjct: 544  SSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKF 603

Query: 607  KALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTI 666
             ALVE+E+G  +K LRSD GGE+TS EF+ +C+ +GIR   TVP TPQ NGV ER NRTI
Sbjct: 604  HALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTI 663

Query: 667  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFG 726
            +   RSML+  K+PK FW +AV+ A YL NRSP+  L  + P++ WT ++ S  HL+VFG
Sbjct: 664  VEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFG 723

Query: 727  CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNW 786
            C A+AH+P ++R+KLDDKS   +F+GY     GY+L++PV KK I SRDVVF E      
Sbjct: 724  CRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTA 783

Query: 787  NDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDE- 846
             D  E  K    P+    PS   +P     T  +ST+   +   E P  +    +  DE 
Sbjct: 784  ADMSEKVKNGIIPNFVTIPSTSNNP-----TSAESTTDEVSEQGEQPGEVIEQGEQLDEG 843

Query: 847  TEEL----------------------SQSFNNLTLFCLFGDSEPLNFEEA---SQNDKWK 906
             EE+                      S+ + +     +  D EP + +E     + ++  
Sbjct: 844  VEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLM 903

Query: 907  IAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK 966
             AM E++++++KN T++L  LP GK+ +  KWVFK+K++   ++ RYKARLV KG+ Q+K
Sbjct: 904  KAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKK 963

Query: 967  GIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEE------------ 1026
            GID+DE+F+PV ++ +IR +++LAA  + ++ Q+DVK+AFL+G LEEE            
Sbjct: 964  GIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVA 1023

Query: 1027 ---DKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCL 1086
                 V KL K+LYGLKQAPR W  + + +     YL+   +  +Y K     + +++ L
Sbjct: 1024 GKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLL 1083

Query: 1087 YVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEV--KQSEEGIFISQERYTR 1146
            YVDD++  G    +   LK  +++ F+M D+G     LG+++  +++   +++SQE+Y  
Sbjct: 1084 YVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIE 1143

Query: 1147 EILEKFNMMNSKPVATPIETGTKLSKH------EEGDDVDPSYFKSLVGSLRY-LTCTRP 1206
             +LE+FNM N+KPV+TP+    KLSK       EE  ++    + S VGSL Y + CTRP
Sbjct: 1144 RVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRP 1203

Query: 1207 DILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGD 1266
            DI  +VG+VSRF+E+P   H +  K ILRYLRGT    L +  S    L+GY D+D AGD
Sbjct: 1204 DIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGD 1263

Query: 1267 TNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGI 1326
             ++RKS++GY+F     A +W SK Q  V LST EAEY+AA       +WL+  L+ +G+
Sbjct: 1264 IDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL 1323

Query: 1327 LQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIAD 1334
             Q++  V++ D++S I L+KN ++H R+KHID R+H+IR+ +  + ++V  + T +  AD
Sbjct: 1324 HQKE-YVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPAD 1328

[Close]

BLAST of Pay0002884 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 605.1 bits (1559), Expect = 1.9e-171
Identity = 458/1484 (30.86%), Postives = 708/1484 (47.71%), Query Frame = 0


Query: 2    ANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQ 61
            A  N+ PF       E Y+ W  R++ALL  QDV  +V +G    E D +  +A+R A  
Sbjct: 4    AKRNIKPFD-----GEKYAIWKFRIRALLAEQDVLKVV-DGLMPNEVDDSWKKAERCAKS 63

Query: 62   NTRKKYQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDY 121
                      TII    D      ++ AT+   A QILEN     +R        LR   
Sbjct: 64   ----------TIIEYLSD----SFLNFATSDITARQILENLDAVYERKSLASQLALRKRL 123

Query: 122  ESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESK 181
             SL +    S+  +      +++E+   G  I +   +  +L +L   ++ I+ AIE   
Sbjct: 124  LSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIE--- 183

Query: 182  DLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRG 241
               T+S + L             KN+ + +++   K+K    + S +  N       N  
Sbjct: 184  ---TLSEENL--------TLAFVKNRLLDQEI---KIKNDHNDTSKKVMNAIVHNNNNTY 243

Query: 242  RGD-FKDRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 301
            + + FK+R       +K ++ NS                            K +V+C++C
Sbjct: 244  KNNLFKNR---VTKPKKIFKGNS----------------------------KYKVKCHHC 303

Query: 302  HKFGHYSWEC-------RNRMKKS----------GDSSLFLACKGAETCENSAWYLDSGA 361
             + GH   +C        N+ K++          G + +          +N  + LDSGA
Sbjct: 304  GREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGA 363

Query: 362  SNHMCGSKSMFVELDESVGGDIVFGDATKIPVKGKGKI-------LINLKNGKHEFISNV 421
            S+H+   +S++ +  E V          KI V  +G+        ++ L+N     + +V
Sbjct: 364  SDHLINDESLYTDSVEVV-------PPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDV 423

Query: 422  YYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA 481
             +      N++S+ +L E G +I      + I  N   ++    M  N + ++N Q   A
Sbjct: 424  LFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGML-NNVPVINFQ---A 483

Query: 482  QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKG---LPYVKLPDQLCEGCLHGKQS 541
              + +  K+   +WH RFGH++   L  + RKNM      L  ++L  ++CE CL+GKQ+
Sbjct: 484  YSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQA 543

Query: 542  RKSFPQ-ESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSE 601
            R  F Q +     +RPL +VH+D+CGPI P +    NYF++F+D F+     Y +K KS+
Sbjct: 544  RLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSD 603

Query: 602  VFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGV 661
            VF MF+ F A  E      +  L  D G E+ SNE + FC + GI   +TVP TPQ NGV
Sbjct: 604  VFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGV 663

Query: 662  VERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSL--WNKTPQQAWTGRK 721
             ER  RTI   AR+M+   K+ K FW +AV  A YL NR P+R+L   +KTP + W  +K
Sbjct: 664  SERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKK 723

Query: 722  PSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDV 781
            P + HLRVFG   Y HI + K+ K DDKS K +FVGY+ +  G+KL++ V +K IV+RDV
Sbjct: 724  PYLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDV 783

Query: 782  VFDE-------------------------------------------------------E 841
            V DE                                                       +
Sbjct: 784  VVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSK 843

Query: 842  ASWNWN---------------------------DEPEDYKFLFFPDERDEPSDIASPPTS 901
             S N N                           D  E  K+     ++ +  D  +    
Sbjct: 844  ESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKG 903

Query: 902  PITPQQSTSSSSAS-----SSEGPRGMRSLQDIYDETEELSQ----SFNN---------L 961
               P +S  S +A        + P     ++ I   +E L      S+N          L
Sbjct: 904  SGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVL 963

Query: 962  TLFCLFGDSEPLNFEEASQND---KWKIAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWV 1021
                +F D  P +F+E    D    W+ A++ ++ A K N+TW ++  P  K  V  +WV
Sbjct: 964  NAHTIFND-VPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWV 1023

Query: 1022 FKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQ 1081
            F +K NE G   RYKARLVA+G++Q+  IDY+E FAPVAR+ + R +++L  Q N K+ Q
Sbjct: 1024 FSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQ 1083

Query: 1082 MDVKSAFLNGYLEEE-------------DKVLKLKKALYGLKQAPRMWNSRINKYFLDNG 1141
            MDVK+AFLNG L+EE             D V KL KA+YGLKQA R W     +   +  
Sbjct: 1084 MDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1143

Query: 1142 YLRCPYEHSLYIKVNGH-GDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLM 1201
            ++    +  +YI   G+  + + V LYVDD++      +   + K  + ++F MTD+  +
Sbjct: 1144 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1203

Query: 1202 SYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPS 1261
             +++GI ++  E+ I++SQ  Y ++IL KFNM N   V+TP+ +          +D + +
Sbjct: 1204 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN-T 1263

Query: 1262 YFKSLVGSLRY-LTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYS 1321
              +SL+G L Y + CTRPD+  +V ++SR+     +   +  KR+LRYL+GT+D  L + 
Sbjct: 1264 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFK 1323

Query: 1322 SSKEF--KLEGYCDSDWAGDTNDRKSTSGYVF-FIGNTAFTWSSKKQPIVTLSTCEAEYV 1334
             +  F  K+ GY DSDWAG   DRKST+GY+F         W++K+Q  V  S+ EAEY+
Sbjct: 1324 KNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYM 1383

[Close]

BLAST of Pay0002884 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.0e-157
Identity = 436/1483 (29.40%), Postives = 684/1483 (46.12%), Query Frame = 0


Query: 11   VPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKA 70
            V +LT  NY  W  ++ AL    ++   +      P +    + A R     TR K Q  
Sbjct: 23   VTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDK 82

Query: 71   L--TIIHQAIDDNNFEKISGATTAYQAWQILENTY--KGVDRVKKVRLQKLRGDYESLHM 130
            L  + +  AI  +    +S ATTA Q W+ L   Y       V ++R Q  +        
Sbjct: 83   LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQ------WT 142

Query: 131  KESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTM 190
            K ++++ DY   L+   +++   G+ +  ++ VE++L +L E++  ++  I  +KD +  
Sbjct: 143  KGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQI-AAKD-TPP 202

Query: 191  SIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFK 250
            ++ ++   L  HE K+L  +      +  + +  ++   +    N   G   NR      
Sbjct: 203  TLTEIHERLLNHESKILAVSSATVIPITANAVSHRN---TTTTNNNNNGNRNNR------ 262

Query: 251  DRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHY 310
                        Y++ +N+N+S+      + +SS     N+ +      +C  C   GH 
Sbjct: 263  ------------YDNRNNNNNSK-----PWQQSSTNFHPNNNQSKPYLGKCQICGVQGHS 322

Query: 311  SWECR------NRMKKSGDSSLFLACK-------GAETCENSAWYLDSGASNHMCGS-KS 370
            +  C       + +      S F   +       G+    N+ W LDSGA++H+     +
Sbjct: 323  AKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNN-WLLDSGATHHITSDFNN 382

Query: 371  MFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQL 430
            + +    + G D++  D + IP+   G   ++ K+ +   + N+ YVPN+  N++S+ +L
Sbjct: 383  LSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKS-RPLNLHNILYVPNIHKNLISVYRL 442

Query: 431  LE-KGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQCLKSCLKDPNWI 490
                G ++     S  ++D +  +      TK+ ++   I +   V+       K  +  
Sbjct: 443  CNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSS 502

Query: 491  WHLRFGHLNFDGLRLLARKNMVKGL-PYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRP 550
            WH R GH     L  +     +  L P  K     C  CL  K ++  F Q S+  + RP
Sbjct: 503  WHARLGHPAPSILNSVISNYSLSVLNPSHKFLS--CSDCLINKSNKVPFSQ-STINSTRP 562

Query: 551  LELVHTDL-CGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKE 610
            LE +++D+   PI   S     Y+++F+D F+R TW+Y +K+KS+V   F  FK L+E  
Sbjct: 563  LEYIYSDVWSSPI--LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENR 622

Query: 611  SGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSM 670
                I    SD GGEF +     + +++GI    + P TP+ NG+ ERK+R I+    ++
Sbjct: 623  FQTRIGTFYSDNGGEFVA--LWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTL 682

Query: 671  LKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHI 730
            L    +PK +W  A   AVYL NR PT  L  ++P Q   G  P+   LRVFGC  Y  +
Sbjct: 683  LSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWL 742

Query: 731  PDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE------------- 790
                + KLDDKS + VF+GY  +   Y   +  T +  +SR V FDE             
Sbjct: 743  RPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLS 802

Query: 791  -------EASWNWNDE---PEDYKFLFFPDERDEPSDIASPPTSPITP------------ 850
                   E+S  W+     P     L  P   D P   A+PP+SP  P            
Sbjct: 803  PVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSD-PHHAATPPSSPSAPFRNSQVSSSNLD 862

Query: 851  -----------------------------------------------------QQSTSSS 910
                                                                  QS S+ 
Sbjct: 863  SSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTP 922

Query: 911  SASSSEGPRGMRSLQD----------IYDETEELSQSFNN-------------------- 970
            + SSS  P    S             +      L+Q  NN                    
Sbjct: 923  AQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGII 982

Query: 971  ------LTLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWEL-STLPNGKKAV 1030
                       L  +SEP    +A ++++W+ AM  +I A   N TW+L    P+    V
Sbjct: 983  KPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIV 1042

Query: 1031 GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 1090
            G +W+F  K N  G + RYKARLVAKGY+QR G+DY E F+PV +  +IR+++ +A   +
Sbjct: 1043 GCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRS 1102

Query: 1091 WKIFQMDVKSAFLNGYLEEE----------DK-----VLKLKKALYGLKQAPRMWNSRIN 1150
            W I Q+DV +AFL G L ++          DK     V KL+KALYGLKQAPR W   + 
Sbjct: 1103 WPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELR 1162

Query: 1151 KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 1210
             Y L  G++    + SL++   G   I+ + +YVDD++ TGN  ++  +  + ++Q F +
Sbjct: 1163 NYLLTIGFVNSVSDTSLFVLQRGK-SIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSV 1222

Query: 1211 TDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEG 1270
             D   + Y+LGIE K+   G+ +SQ RY  ++L + NM+ +KPV TP+    KLS +   
Sbjct: 1223 KDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGT 1282

Query: 1271 DDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDY 1330
               DP+ ++ +VGSL+YL  TRPDI ++V  +S+FM  PT  HL+  KRILRYL GT ++
Sbjct: 1283 KLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNH 1342

[Close]

BLAST of Pay0002884 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 8.4e-156
Identity = 432/1495 (28.90%), Postives = 682/1495 (45.62%), Query Frame = 0


Query: 11   VPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKA 70
            V +LT  NY  W  ++ AL    ++   +      P +    +   R     TR + Q  
Sbjct: 23   VTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDK 82

Query: 71   L--TIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKE 130
            L  + I  AI  +    +S ATTA Q W+ L   Y         +L              
Sbjct: 83   LIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQL-------------- 142

Query: 131  SESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSI 190
                     R +   +++   G+ +  ++ VE++L +L + +  ++  I  +KD +  S+
Sbjct: 143  ---------RFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQI-AAKD-TPPSL 202

Query: 191  DQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDR 250
             ++   L   E KLL  N      +  + +  ++   +  + NRG  R            
Sbjct: 203  TEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNR------------ 262

Query: 251  GQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVE-----CYNCHKF 310
                         N N+N++R         +SW+ S++  R D RQ +     C  C   
Sbjct: 263  -------------NYNNNNNRS--------NSWQPSSSGSRSDNRQPKPYLGRCQICSVQ 322

Query: 311  GHYSWEC------RNRMKKSGDSSLF--------LACKGAETCENSAWYLDSGASNHMCG 370
            GH +  C      ++   +   +S F        LA        N  W LDSGA++H+  
Sbjct: 323  GHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANN--WLLDSGATHHITS 382

Query: 371  S-KSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILS 430
               ++      + G D++  D + IP+   G   +   +   + ++ V YVPN+  N++S
Sbjct: 383  DFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLD-LNKVLYVPNIHKNLIS 442

Query: 431  LGQLLEKG-YNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQCLKSCLKD 490
            + +L      ++     S  ++D +  +      TK+ ++   I +   V+     C K 
Sbjct: 443  VYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKA 502

Query: 491  PNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQL--CEGCLHGKQSRKSFPQESSW 550
             +  WH R GH     L +L        LP +    +L  C  C   K  +  F   S+ 
Sbjct: 503  THSSWHSRLGH---PSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPF-SNSTI 562

Query: 551  RARRPLELVHTDL-CGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKA 610
             + +PLE +++D+   PI   S     Y+++F+D F+R TW+Y +K+KS+V   F  FK+
Sbjct: 563  TSSKPLEYIYSDVWSSPI--LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKS 622

Query: 611  LVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILN 670
            LVE      I  L SD GGEF     + + +++GI    + P TP+ NG+ ERK+R I+ 
Sbjct: 623  LVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVE 682

Query: 671  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 730
            M  ++L    +PK +W  A   AVYL NR PT  L  ++P Q   G+ P+   L+VFGC 
Sbjct: 683  MGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCA 742

Query: 731  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-------- 790
             Y  +    R KL+DKS++  F+GY  +   Y   +  T +   SR V FDE        
Sbjct: 743  CYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTT 802

Query: 791  ------------EASWNW------------------------------------------ 850
                        +++ NW                                          
Sbjct: 803  NFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVS 862

Query: 851  -------------NDEP---------------------EDYKFLFFPD---------ERD 910
                         + EP                      +   L  P+          ++
Sbjct: 863  SSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQN 922

Query: 911  EP---SDIASP----PTSPITPQQSTSSSSAS----------------SSEGPRGMRSLQ 970
             P   S I+SP    P++ I+   S SSSS S                +++ P    S+ 
Sbjct: 923  SPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMA 982

Query: 971  D-IYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWEL- 1030
                D   + +Q ++  T   L  +SEP    +A ++D+W+ AM  +I A   N TW+L 
Sbjct: 983  TRAKDGIRKPNQKYSYAT--SLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLV 1042

Query: 1031 STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIR 1090
               P     VG +W+F  K N  G + RYKARLVAKGY+QR G+DY E F+PV +  +IR
Sbjct: 1043 PPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1102

Query: 1091 LLIALAAQNNWKIFQMDVKSAFLNGYLEEE---------------DKVLKLKKALYGLKQ 1150
            +++ +A   +W I Q+DV +AFL G L +E               D V +L+KA+YGLKQ
Sbjct: 1103 IVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQ 1162

Query: 1151 APRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDL 1210
            APR W   +  Y L  G++    + SL++   G   I+ + +YVDD++ TGN   + +  
Sbjct: 1163 APRAWYVELRTYLLTVGFVNSISDTSLFVLQRGR-SIIYMLVYVDDILITGNDTVLLKHT 1222

Query: 1211 KNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET 1270
             +A++Q F + +   + Y+LGIE K+  +G+ +SQ RYT ++L + NM+ +KPVATP+ T
Sbjct: 1223 LDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMAT 1282

Query: 1271 GTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRI 1330
              KL+ H      DP+ ++ +VGSL+YL  TRPD+ ++V  +S++M  PT  H    KR+
Sbjct: 1283 SPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1342

Query: 1331 LRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQP 1333
            LRYL GT D+G+F        L  Y D+DWAGDT+D  ST+GY+ ++G+   +WSSKKQ 
Sbjct: 1343 LRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1402

[Close]

BLAST of Pay0002884 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-44
Identity = 87/226 (38.50%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1015 LVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQER 1074
            + + LYVDD++ TG+  ++   L   ++  F M D+G + Y+LGI++K    G+F+SQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1075 YTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILF 1134
            Y  +IL    M++ KP++TP+      S        DPS F+S+VG+L+YLT TRPDI +
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 1135 SVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDR 1194
            +V +V + M  PT     + KR+LRY++GT+ +GL+   + +  ++ +CDSDWAG T+ R
Sbjct: 121  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

Query: 1195 KSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW 1241
            +ST+G+  F+G    +WS+K+QP V+ S+ E EY A A       W
Sbjct: 181  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Pay0002884 vs. ExPASy TrEMBL
Match: A0A5D3CTU3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00790 PE=4 SV=1)

HSP 1 Score: 2647.5 bits (6861), Expect = 0.0e+00
Identity = 1327/1362 (97.43%), Postives = 1332/1362 (97.80%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKYQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKK QKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKF ESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNRM----------KKSGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRNR+          ++SGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMF+ELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
            FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL
Sbjct: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEE---------------EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEE               EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1338
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1362

[Close]

BLAST of Pay0002884 vs. ExPASy TrEMBL
Match: A0A5A7V277 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00740 PE=4 SV=1)

HSP 1 Score: 2615.5 bits (6778), Expect = 0.0e+00
Identity = 1310/1362 (96.18%), Postives = 1322/1362 (97.06%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKYQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKK QKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKF ESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNRM----------KKSGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRNR+          ++SGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMF+ELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFTPQ  GVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQLIGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKT QQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTSQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNP+TKKTI+SRDVVFDEEASWNWNDE EDYKFL
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPITKKTIISRDVVFDEEASWNWNDESEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
             FPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPR MRSLQDIYDETEELSQ+FNNL
Sbjct: 781  CFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRDMRSLQDIYDETEELSQNFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEE---------------EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEE               EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNC SMFEDLK AMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCVSMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERY RE+LEKFNMMNSKP+ATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYIREVLEKFNMMNSKPIATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIH+DNKS IALAKN VFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHVDNKSAIALAKNLVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1338
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1362

[Close]

BLAST of Pay0002884 vs. ExPASy TrEMBL
Match: A0A5D3C639 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002010 PE=4 SV=1)

HSP 1 Score: 2593.1 bits (6720), Expect = 0.0e+00
Identity = 1302/1337 (97.38%), Postives = 1307/1337 (97.76%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKK QKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265
            NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKF ESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRM----------K 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNR+          +
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  KSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPV 385
            +SGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMF+ELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC EN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 840

Query: 866  AMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE-------------- 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE              
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  -EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
             EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1338
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

[Close]

BLAST of Pay0002884 vs. ExPASy TrEMBL
Match: A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)

HSP 1 Score: 2590.8 bits (6714), Expect = 0.0e+00
Identity = 1301/1337 (97.31%), Postives = 1306/1337 (97.68%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKK QKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265
            NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKF ESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRM----------K 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNR+          +
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  KSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPV 385
            +SGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMF+ELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC EN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKI 840

Query: 866  AMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE-------------- 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE              
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  -EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
             EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1338
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

[Close]

BLAST of Pay0002884 vs. ExPASy TrEMBL
Match: A0A5A7SJX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002010 PE=4 SV=1)

HSP 1 Score: 2588.1 bits (6707), Expect = 0.0e+00
Identity = 1300/1337 (97.23%), Postives = 1305/1337 (97.61%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKK QKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265
            NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKF ESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRM----------K 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNR+          +
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  KSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPV 385
            +SGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMF+ELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC EN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL FPDE DEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 840

Query: 866  AMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE-------------- 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE              
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  -EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
             EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1338
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

[Close]

BLAST of Pay0002884 vs. NCBI nr
Match: TYK13816.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2647.5 bits (6861), Expect = 0.0e+00
Identity = 1327/1362 (97.43%), Postives = 1332/1362 (97.80%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKYQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKK QKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKF ESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNRM----------KKSGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRNR+          ++SGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMF+ELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFTPQQNGVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
            FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL
Sbjct: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEE---------------EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEE               EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1338
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1362

[Close]

BLAST of Pay0002884 vs. NCBI nr
Match: KAA0062322.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2615.5 bits (6778), Expect = 0.0e+00
Identity = 1310/1362 (96.18%), Postives = 1322/1362 (97.06%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKYQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKK QKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKF ESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNRM----------KKSGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRNR+          ++SGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMF+ELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFTPQ  GVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQLIGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKT QQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTSQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNP+TKKTI+SRDVVFDEEASWNWNDE EDYKFL
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPITKKTIISRDVVFDEEASWNWNDESEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
             FPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPR MRSLQDIYDETEELSQ+FNNL
Sbjct: 781  CFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRDMRSLQDIYDETEELSQNFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEE---------------EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEE               EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNC SMFEDLK AMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCVSMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERY RE+LEKFNMMNSKP+ATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYIREVLEKFNMMNSKPIATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIH+DNKS IALAKN VFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHVDNKSAIALAKNLVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1338
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKHV 1362

[Close]

BLAST of Pay0002884 vs. NCBI nr
Match: TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2593.1 bits (6720), Expect = 0.0e+00
Identity = 1302/1337 (97.38%), Postives = 1307/1337 (97.76%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKK QKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265
            NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKF ESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRM----------K 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNR+          +
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  KSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPV 385
            +SGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMF+ELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC EN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 840

Query: 866  AMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE-------------- 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE              
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  -EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
             EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1338
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

[Close]

BLAST of Pay0002884 vs. NCBI nr
Match: TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2590.8 bits (6714), Expect = 0.0e+00
Identity = 1301/1337 (97.31%), Postives = 1306/1337 (97.68%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKK QKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265
            NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKF ESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRM----------K 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNR+          +
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  KSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPV 385
            +SGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMF+ELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC EN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKI 840

Query: 866  AMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE-------------- 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE              
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  -EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
             EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1338
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

[Close]

BLAST of Pay0002884 vs. NCBI nr
Match: KAA0031444.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2588.1 bits (6707), Expect = 0.0e+00
Identity = 1300/1337 (97.23%), Postives = 1305/1337 (97.61%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKYQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKK QKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFYESNSNS 265
            NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKF ESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRM----------K 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNR+          +
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  KSGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFVELDESVGGDIVFGDATKIPV 385
            +SGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMF+ELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC EN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRR MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL FPDE DEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 840

Query: 866  AMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDE+IKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE-------------- 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEE              
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  -EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
             EDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLK AMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1338
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

[Close]

BLAST of Pay0002884 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 359.0 bits (920), Expect = 1.7e-98
Identity = 183/493 (37.12%), Postives = 295/493 (59.84%), Query Frame = 0


Query: 817  YDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEKIKAIKKNDTWELSTLP 876
            Y++   L  SF    L C+    EP  + EA +   W  AMD++I A++   TWE+ TLP
Sbjct: 66   YEKVSPLYHSF----LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLP 125

Query: 877  NGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIA 936
              KK +G KWV+KIK N  G +ERYKARLVAKGY+Q++GID+ E F+PV +L +++L++A
Sbjct: 126  PNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILA 185

Query: 937  LAAQNNWKIFQMDVKSAFLNGYLEEE-------------------DKVLKLKKALYGLKQ 996
            ++A  N+ + Q+D+ +AFLNG L+EE                   + V  LKK++YGLKQ
Sbjct: 186  ISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQ 245

Query: 997  APRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDL 1056
            A R W  + +   +  G+++   +H+ ++K+      L V +YVDD+I   N  +  ++L
Sbjct: 246  ASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVDEL 305

Query: 1057 KNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET 1116
            K+ +   F++ D+G + Y+LG+E+ +S  GI I Q +Y  ++L++  ++  KP + P++ 
Sbjct: 306  KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 365

Query: 1117 GTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRI 1176
                S H  GD VD   ++ L+G L YL  TR DI F+V  +S+F E+P   H +   +I
Sbjct: 366  SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 425

Query: 1177 LRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQP 1236
            L Y++GT+  GLFYSS  E +L+ + D+ +    + R+ST+GY  F+G +  +W SKKQ 
Sbjct: 426  LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 485

Query: 1237 IVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDR 1291
            +V+ S+ EAEY A +      +WL    + + +    PT++  DN + I +A N VFH+R
Sbjct: 486  VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 545

[Close]

BLAST of Pay0002884 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-45
Identity = 87/226 (38.50%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1015 LVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQER 1074
            + + LYVDD++ TG+  ++   L   ++  F M D+G + Y+LGI++K    G+F+SQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1075 YTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILF 1134
            Y  +IL    M++ KP++TP+      S        DPS F+S+VG+L+YLT TRPDI +
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 1135 SVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDR 1194
            +V +V + M  PT     + KR+LRY++GT+ +GL+   + +  ++ +CDSDWAG T+ R
Sbjct: 121  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

Query: 1195 KSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW 1241
            +ST+G+  F+G    +WS+K+QP V+ S+ E EY A A       W
Sbjct: 181  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Pay0002884 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 49/92 (53.26%), Postives = 74/92 (80.43%), Query Frame = 0


Query: 1  MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
          MA+NN VPFQVP LTK NY +W +RMKA+LG+ DVW+IV  G+ EPE++ +L+Q Q++ L
Sbjct: 1  MASNN-VPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGL 60

Query: 61 QNTRKKYQKALTIIHQAIDDNNFEKISGATTA 93
          +++RK+ +KAL +I+Q +D++ FEK+  AT+A
Sbjct: 61 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSA 91

[Close]

BLAST of Pay0002884 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-17
Identity = 92/419 (21.96%), Postives = 165/419 (39.38%), Query Frame = 0


Query: 18  NYSSWCIRMKALLGSQDVWDIVSNGY-----EEPESDAALNQAQREALQNTRKKYQKALT 77
           +Y  W    K+ L  Q +WD+V NG      + PE  A +   +    ++   K  KAL 
Sbjct: 16  DYEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEELSKWRDFVVKDAKALQ 75

Query: 78  IIHQAIDDNNFEKISGATTAYQAWQILE--NTYKGVDRVKKVRLQKLRGDYESLHMKESE 137
           I+  ++ D+ F K   A++A   W +L   N    + R+++V +++L    E L M + E
Sbjct: 76  ILQSSLTDSVFRKTLSASSAKDVWDLLRKGNEQATIRRLEQVTIRRLEKQLEDLKMVDKE 135

Query: 138 SVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQ 197
           S S Y  + L ++  + R     SD ++ + +  +L   F+ +   +EE  D+  M+   
Sbjct: 136 SGSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDSMLEELIDVHKMTSKS 195

Query: 198 LMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQ 257
           L+      E    + ++  TE+     LK                               
Sbjct: 196 LV------EYFYYRVHESSTEEAIFGLLK------------------------------- 255

Query: 258 GSYGQRKFYESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWEC 317
                                              + R   K +  C  C+K  H   +C
Sbjct: 256 -----------------------------------DLRLKSKSEKWCGLCYKNNHNQEDC 315

Query: 318 RNRM---KKSGDSSLFLACK-------GAETCENSAWYLDSGASNHMCGSKSMFVELDES 377
           + R+   K+  +  + +  +       GA+T ++  W +   A  +M      F  LD +
Sbjct: 316 KFRIHTDKEEKEDEIVVDYRLETVPNLGAKTYDDDIWIIHKMAPINMTPYVKYFTTLDRT 362

Query: 378 VGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNI 420
               +   D T + V+GKG + I +K GK + I NV +VP +  N+LS G+++ K Y+I
Sbjct: 376 FKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSI 362

[Close]

BLAST of Pay0002884 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 81.3 bits (199), Expect = 6.7e-15
Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 840 EPLNFEEASQNDKWKIAMDEKIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE 899
           EP +   A ++  W  AM E++ A+ +N TW L   P  +  +G KWVFK K +  G ++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 900 RYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQ 941
           R KARLVAKG+ Q +GI + E ++PV R  TIR ++ +A Q
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

The following BLAST results are available for this feature:

BLAST of Pay0002884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.7e-204	33.43	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.9e-171	30.86	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.0e-157	29.40	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	8.4e-156	28.90	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	2.3e-44	38.50	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0002884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CTU3	0.0e+00	97.43	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7V277	0.0e+00	96.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C639	0.0e+00	97.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D497	0.0e+00	97.31	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SJX6	0.0e+00	97.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Pay0002884 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK13816.1	0.0e+00	97.43	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0062322.1	0.0e+00	96.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK06895.1	0.0e+00	97.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK18362.1	0.0e+00	97.31	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0031444.1	0.0e+00	97.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Pay0002884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.7e-98	37.12	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.6e-45	38.50	DNA/RNA polymerases superfamily protein	[more]
AT1G48720.1	3.0e-23	53.26	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]
AT3G21000.1	1.1e-17	21.96	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	6.7e-15	41.58	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..208
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 64..202 e-value: 2.8E-27 score: 95.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 787..809
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 778..810
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 16..761 coord: 839..1208
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1180..1316 e-value: 8.99718E-81 score: 259.323
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 296..312 e-value: 0.0049 score: 25.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 297..312 score: 9.108787
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 520..716 e-value: 4.3E-47 score: 162.0
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 14..40 e-value: 5.2E-9 score: 35.6
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 867..1095 e-value: 1.6E-75 score: 253.8
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 457..512 e-value: 2.3E-12 score: 46.6
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 526..627 e-value: 9.9E-14 score: 51.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 524..690 score: 26.316557
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 281..318
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 527..699
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 866..1286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002884.1	Pay0002884.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding