Pay0002647 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002647
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RNA-binding (RRM/RBD/RNP motifs) family protein
Location	chr10: 5422755 .. 5425002 (-)
RNA-Seq Expression	Pay0002647
Synteny	Pay0002647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTCCATACCACTCTGTTTCTTCACAACACTTCTCTTATTTAACCTTCTTCTTCTCTCCATCACCACCATTTTTCCCCATTTTAACTTAATTACTTCTAATTACTTCCTTAGCTTGTTTTGTTCCATGACGATGATGACCACCACCACCACCACCAACAGTAATACCAATGCAGGTTTGTTCGGGGATACCACTTTGACGAAAGTCTTCGTTGGTGGGTTAGCTTGGGAAACACCAAAGGAAGCCATGAGAGATCACTTCCAGAAGTTCGGTGAAATTCTCGAAGCGGTTATAATCTCTGATAAACTCACCGGCAGATCCAAGGGATATGGATTCGTAAGTGATGCAGTAATTAGCGATTGATTGATTGATTGATCTCCGTTTTGTTTGTTTGATTGATTTACGGTTTTGGGTTTTTTAGGTTACATTCAAAGACGCGGAATCGGCGAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTCGCTTCACTTGGAGCTCGGCGCGGCGGTTCTAGGTCGGCTTCCGCTACTCCTCCTCAAGCTCCTCAACCAGGTTAATACAAAAAAAAAAAAAAAAAAAAAAAACTTCCGAGTTCTTCCGATCATCAACGGCATTTTCGTAATCTTTTTGTTGATGGAGATCTGAATTTGGTTTGTAATATTTTGAAGGATCGAACGGTGGAGGACCGAGAACGACAACAGCAGCAACCGCACCGGGAAATCACGTGCAGTGGTATTACCCGGCGGGGACTCATCCAGCGCCGTTTCATCATCAGCCTCATCAACCGGTCCCTTTTTATGGGTATACCTTAAGATCCCATATTCTGTTGCGCACTCTAATTTCCCCCATTTTGTTTAATCGACGTTTAATCAAATTAAATGTAAGTTTTCATTTTCTTTTAGATATTCCCCAAGCCCCACATACATCGCAACCGATATCAGTTACAACCACGTAAGCCACCCCCCTTTATTCCTTTATTTTATTTAAATAAATTAATAAGACATAAGTTAGTTAAAACGGCGACGTTTTTTGGTTTTAAATGCACAGAAATTGGGGTATGTGAACGGACATTACACACAAATGTATCCAGGGCAGGCGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCCATGGGGATGCCGGCCCACATCTTCCCTCCTAGTCCCACGACGGCGGGCCCCTTCGCCGCTGTCCCACCCACTTCCATTATGTCCAAACCAACCACCGTTGGTCCCAACCCAGGTCCGTTTTTTACTTAACCCTTCTCAAATTATTGTAAATTGTTGGCGTCTGCACATTGTTTTTGGTCATTGCATGTGGTAAAAAAAAAAAAAAAAGAAAAGAAAGAACAGAAAAAAACACGAAAAATGGTCAATAGTCAAACGTTATTAACAAGAAGAGAGAGAGAGAGAAAAAAAAAAAGAGGGCGGGGGTGCAAAAAACAACAGATCAGAGTGGTCGTTGTTCACGTGAAAGGGTGATTTAGTAAAAAGTGTCTTCTCCGTCAGTGCCAACTGGCATGGCTGGGTCCCACGTGGCCAGCTTGATTCGCCGGTCGTGCGTTGGTCTAGCTGTCCCTACCCCCCCAATTCCCTTAATAATCCTTAACTTGAAGGACTATTTTGCAATATAATATCAACTACTTTTCTAGATTCCTGAATGCTTATATTGTAGAGATAATGAAAACATTATTTTAATCCTTTTCCAAGCATAAAAAACATTATTTGAAGTGAAGTATTGTAAATTTCTAAACAAGCGTTGATTTCTTGTTGAGCATGTTGGTTGTATTATCAATGTTTGTTTTAAATGAAGTGTAATTGTGGAGTAAAAAATAATGCTTGATCATTAAACTGATATTACAAAGAAACAGTTTGCTTGGTTGTGGAATAAATAGGTACAGTTGGAGGCAGGGGATGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGCATGGTAAAAGAAGAGCAGAGTAGTATAAAAATGGGGACAGGGCAGGCTAAGAGGGACTATTTTTTTTATAAAAAAAAATTTCTTTTTTAAATTTTTAATCAGAACATCTCATTCTCTTAGTACATGGCAGGCAAGAAAAAAGAAAAAGAAAAATAACAGAGACAATGTGAAGCTGGTTGAGGGGGGCTGCTCAGAACTACATTATTTTTAGGCTGATCTGTTGTAGC

mRNA sequence

TTATTTCCATACCACTCTGTTTCTTCACAACACTTCTCTTATTTAACCTTCTTCTTCTCTCCATCACCACCATTTTTCCCCATTTTAACTTAATTACTTCTAATTACTTCCTTAGCTTGTTTTGTTCCATGACGATGATGACCACCACCACCACCACCAACAGTAATACCAATGCAGGTTTGTTCGGGGATACCACTTTGACGAAAGTCTTCGTTGGTGGGTTAGCTTGGGAAACACCAAAGGAAGCCATGAGAGATCACTTCCAGAAGTTCGGTGAAATTCTCGAAGCGGTTATAATCTCTGATAAACTCACCGGCAGATCCAAGGGATATGGATTCGTTACATTCAAAGACGCGGAATCGGCGAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTCGCTTCACTTGGAGCTCGGCGCGGCGGTTCTAGGTCGGCTTCCGCTACTCCTCCTCAAGCTCCTCAACCAGGATCGAACGGTGGAGGACCGAGAACGACAACAGCAGCAACCGCACCGGGAAATCACGTGCAGTGGTATTACCCGGCGGGGACTCATCCAGCGCCGTTTCATCATCAGCCTCATCAACCGGTCCCTTTTTATGGATATTCCCCAAGCCCCACATACATCGCAACCGATATCAGTTACAACCACAAATTGGGGTATGTGAACGGACATTACACACAAATGTATCCAGGGCAGGCGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCCATGGGGATGCCGGCCCACATCTTCCCTCCTAGTCCCACGACGGCGGGCCCCTTCGCCGCTGTCCCACCCACTTCCATTATGTCCAAACCAACCACCGTTGGTCCCAACCCAGTTTGCTTGGTTGTGGAATAAATAGGTACAGTTGGAGGCAGGGGATGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGCATGGTAAAAGAAGAGCAGAGTAGTATAAAAATGGGGACAGGGCAGGCTAAGAGGGACTATTTTTTTTATAAAAAAAAATTTCTTTTTTAAATTTTTAATCAGAACATCTCATTCTCTTAGTACATGGCAGGCAAGAAAAAAGAAAAAGAAAAATAACAGAGACAATGTGAAGCTGGTTGAGGGGGGCTGCTCAGAACTACATTATTTTTAGGCTGATCTGTTGTAGC

Coding sequence (CDS)

ATGACGATGATGACCACCACCACCACCACCAACAGTAATACCAATGCAGGTTTGTTCGGGGATACCACTTTGACGAAAGTCTTCGTTGGTGGGTTAGCTTGGGAAACACCAAAGGAAGCCATGAGAGATCACTTCCAGAAGTTCGGTGAAATTCTCGAAGCGGTTATAATCTCTGATAAACTCACCGGCAGATCCAAGGGATATGGATTCGTTACATTCAAAGACGCGGAATCGGCGAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTCGCTTCACTTGGAGCTCGGCGCGGCGGTTCTAGGTCGGCTTCCGCTACTCCTCCTCAAGCTCCTCAACCAGGATCGAACGGTGGAGGACCGAGAACGACAACAGCAGCAACCGCACCGGGAAATCACGTGCAGTGGTATTACCCGGCGGGGACTCATCCAGCGCCGTTTCATCATCAGCCTCATCAACCGGTCCCTTTTTATGGATATTCCCCAAGCCCCACATACATCGCAACCGATATCAGTTACAACCACAAATTGGGGTATGTGAACGGACATTACACACAAATGTATCCAGGGCAGGCGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCCATGGGGATGCCGGCCCACATCTTCCCTCCTAGTCCCACGACGGCGGGCCCCTTCGCCGCTGTCCCACCCACTTCCATTATGTCCAAACCAACCACCGTTGGTCCCAACCCAGTTTGCTTGGTTGTGGAATAA

Protein sequence

MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPVCLVVE

Homology

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BLAST of Pay0002647 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 140/265 (52.83%), Postives = 168/265 (63.40%), Query Frame = 0


Query: 9   TTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGY 68
           TT++N N G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGY
Sbjct: 2   TTSNNVN-GCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGY 61

Query: 69  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNGGG 128
           GFVTFKDA++A +ACEDS PIINGRRANCNLASLG R    +S + T PQ         G
Sbjct: 62  GFVTFKDAKAATRACEDSTPIINGRRANCNLASLGGRL--RKSPTMTSPQQ--------G 121

Query: 129 PRTTTAATAP--GNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG 188
           P+    AT P  GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G
Sbjct: 122 PKNGNRATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPFYGY-PS-AYVAPNMTFNQKVG 181

Query: 189 YV-----NGHYTQMYP-----------------GQAAMVG-ANTLMPMYPLYHYHQSHAM 248
           YV     NG+Y QM P                 G   MVG A+ ++P Y +Y YHQS A+
Sbjct: 182 YVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQSQAI 241

[Close]

BLAST of Pay0002647 vs. ExPASy Swiss-Prot
Match: Q5ZJX4 (RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.2e-22
Identity = 48/85 (56.47%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 21  DTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 80
           DTT TK+FVGGL + T   ++R +F+ FG+I EAV+I+D+ TG+S+GYGFVT  D  +A+
Sbjct: 7   DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 81  KACEDSAPIINGRRANCNLASLGAR 106
           +AC+D  PII+GR+AN NLA LGA+
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAK 91

[Close]

BLAST of Pay0002647 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.5e-21
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 21  DTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 80
           DTT TK+FVGGL + T   ++R +F+ FG+I EAV+I+D+ TG+S+GYGFVT  D  +A+
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 81  KACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPG 124
           +AC+D  PII+GR+AN NLA LGA+           P+  QPG
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAK-----------PRIMQPG 98

[Close]

BLAST of Pay0002647 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.5e-21
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 21  DTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 80
           DTT TK+FVGGL + T   ++R +F+ FG+I EAV+I+D+ TG+S+GYGFVT  D  +A+
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 81  KACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPG 124
           +AC+D  PII+GR+AN NLA LGA+           P+  QPG
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAK-----------PRIMQPG 98

[Close]

BLAST of Pay0002647 vs. ExPASy Swiss-Prot
Match: Q5ZMA3 (RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.5e-21
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 21  DTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 80
           DTT TK+FVGGL + T   ++R +F+ FG+I EAV+I+D+ TG+S+GYGFVT  D  +A+
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 81  KACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPG 124
           +AC+D  PII+GR+AN NLA LGA+           P+  QPG
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAK-----------PRIMQPG 98

[Close]

BLAST of Pay0002647 vs. ExPASy TrEMBL
Match: A0A1S3BD62 (probable RNA-binding protein ARP1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488745 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.1e-145
Identity = 262/265 (98.87%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60
           MTMM  TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK
Sbjct: 1   MTMM--TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60

Query: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120
           LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
Sbjct: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120

Query: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDIS 180
           QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDIS
Sbjct: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDIS 180

Query: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240
           YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF
Sbjct: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240

Query: 241 AAVPPTSIMSKPTTVGPNPVCLVVE 266
           AAVPPTSIMSKPTTVGPNPVCLVVE
Sbjct: 241 AAVPPTSIMSKPTTVGPNPVCLVVE 263

[Close]

BLAST of Pay0002647 vs. ExPASy TrEMBL
Match: A0A1S3BEI0 (probable RNA-binding protein ARP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488745 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.4e-142
Identity = 256/259 (98.84%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60
           MTMM  TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK
Sbjct: 1   MTMM--TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60

Query: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120
           LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
Sbjct: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120

Query: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDIS 180
           QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDIS
Sbjct: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDIS 180

Query: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240
           YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF
Sbjct: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240

Query: 241 AAVPPTSIMSKPTTVGPNP 260
           AAVPPTSIMSKPTTVGPNP
Sbjct: 241 AAVPPTSIMSKPTTVGPNP 257

[Close]

BLAST of Pay0002647 vs. ExPASy TrEMBL
Match: A0A5A7SY01 (Putative RNA-binding protein ARP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00350 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.1e-142
Identity = 255/259 (98.46%), Postives = 255/259 (98.46%), Query Frame = 0


Query: 1   MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60
           MTMM  TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK
Sbjct: 1   MTMM--TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60

Query: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120
           LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
Sbjct: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120

Query: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDIS 180
           QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDIS
Sbjct: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDIS 180

Query: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240
           YNHKLGYVNGHYTQMYPGQAAMVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF
Sbjct: 181 YNHKLGYVNGHYTQMYPGQAAMVGVNTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240

Query: 241 AAVPPTSIMSKPTTVGPNP 260
           AAVPPTSIMSKPTTVGPNP
Sbjct: 241 AAVPPTSIMSKPTTVGPNP 257

[Close]

BLAST of Pay0002647 vs. ExPASy TrEMBL
Match: A0A0A0KNL6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175910 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.4e-137
Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 1   MTMMTTTT-TTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISD 60
           MTMMTTTT   NS+TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISD
Sbjct: 1   MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISD 60

Query: 61  KLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA 120
           KLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
Sbjct: 61  KLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA 120

Query: 121 PQPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDI 180
           PQPGSN GGPRTT+AATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDI
Sbjct: 121 PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDI 180

Query: 181 SYNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGP 240
           SYNHKLGY+NGHYTQMYPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGP
Sbjct: 181 SYNHKLGYMNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGP 240

Query: 241 FAAVPPTSIMSKPTTVGPNP 260
           FAAVPPTSIMSKPTTVGPNP
Sbjct: 241 FAAVPPTSIMSKPTTVGPNP 259

[Close]

BLAST of Pay0002647 vs. ExPASy TrEMBL
Match: A0A6J1CCJ5 (probable RNA-binding protein ARP1 OS=Momordica charantia OX=3673 GN=LOC111010248 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 225/260 (86.54%), Postives = 240/260 (92.31%), Query Frame = 0


Query: 10  TNSNTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGY 69
           +N++ NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGY
Sbjct: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61

Query: 70  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNGG 129
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSNGG
Sbjct: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121

Query: 130 GPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 189
           G   +T+A +P NHVQWYYPAGT P PFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181

Query: 190 VN--GHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP 249
           +N  GHY+Q+YPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPP
Sbjct: 182 MNGGGHYSQVYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPP 241

Query: 250 TSIMSKPTTVGPNPVCLVVE 266
           TSIMSKP +VGPNPVCLVVE
Sbjct: 242 TSIMSKPASVGPNPVCLVVE 259

[Close]

BLAST of Pay0002647 vs. NCBI nr
Match: XP_008445853.2 (PREDICTED: probable RNA-binding protein ARP1 isoform X2 [Cucumis melo])

HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-145
Identity = 262/265 (98.87%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60
           MTMM  TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK
Sbjct: 1   MTMM--TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60

Query: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120
           LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
Sbjct: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120

Query: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDIS 180
           QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDIS
Sbjct: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDIS 180

Query: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240
           YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF
Sbjct: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240

Query: 241 AAVPPTSIMSKPTTVGPNPVCLVVE 266
           AAVPPTSIMSKPTTVGPNPVCLVVE
Sbjct: 241 AAVPPTSIMSKPTTVGPNPVCLVVE 263

[Close]

BLAST of Pay0002647 vs. NCBI nr
Match: XP_008445852.2 (PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo])

HSP 1 Score: 514.6 bits (1324), Expect = 5.0e-142
Identity = 256/259 (98.84%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60
           MTMM  TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK
Sbjct: 1   MTMM--TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60

Query: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120
           LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
Sbjct: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120

Query: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDIS 180
           QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDIS
Sbjct: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDIS 180

Query: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240
           YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF
Sbjct: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240

Query: 241 AAVPPTSIMSKPTTVGPNP 260
           AAVPPTSIMSKPTTVGPNP
Sbjct: 241 AAVPPTSIMSKPTTVGPNP 257

[Close]

BLAST of Pay0002647 vs. NCBI nr
Match: KAA0034049.1 (putative RNA-binding protein ARP1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141
Identity = 255/259 (98.46%), Postives = 255/259 (98.46%), Query Frame = 0


Query: 1   MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60
           MTMM  TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK
Sbjct: 1   MTMM--TTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60

Query: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120
           LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
Sbjct: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120

Query: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDIS 180
           QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDIS
Sbjct: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDIS 180

Query: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240
           YNHKLGYVNGHYTQMYPGQAAMVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF
Sbjct: 181 YNHKLGYVNGHYTQMYPGQAAMVGVNTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240

Query: 241 AAVPPTSIMSKPTTVGPNP 260
           AAVPPTSIMSKPTTVGPNP
Sbjct: 241 AAVPPTSIMSKPTTVGPNP 257

[Close]

BLAST of Pay0002647 vs. NCBI nr
Match: XP_011654915.1 (probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus] >KAE8647967.1 hypothetical protein Csa_000221 [Cucumis sativus])

HSP 1 Score: 509.2 bits (1310), Expect = 2.1e-140
Identity = 256/266 (96.24%), Postives = 259/266 (97.37%), Query Frame = 0


Query: 1   MTMMTTTT-TTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISD 60
           MTMMTTTT   NS+TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISD
Sbjct: 1   MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISD 60

Query: 61  KLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA 120
           KLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
Sbjct: 61  KLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA 120

Query: 121 PQPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDI 180
           PQPGSN GGPRTT+AATAPGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDI
Sbjct: 121 PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDI 180

Query: 181 SYNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGP 240
           SYNHKLGY+NGHYTQMYPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGP
Sbjct: 181 SYNHKLGYMNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGP 240

Query: 241 FAAVPPTSIMSKPTTVGPNPVCLVVE 266
           FAAVPPTSIMSKPTTVGPNPVCLVVE
Sbjct: 241 FAAVPPTSIMSKPTTVGPNPVCLVVE 265

[Close]

BLAST of Pay0002647 vs. NCBI nr
Match: XP_038891950.1 (probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida])

HSP 1 Score: 500.4 bits (1287), Expect = 9.8e-138
Identity = 249/265 (93.96%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MTMMTTTTTTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDK 60
           MTMM+TTT +N+N NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDK
Sbjct: 1   MTMMSTTTNSNNN-NAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDK 60

Query: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120
           LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
Sbjct: 61  LTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP 120

Query: 121 QPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDIS 180
           QPGSNGGGPRTT+A   PGNHVQWYYPAGTHP PFHHQPHQPVPFYGYSPSPTYIATDIS
Sbjct: 121 QPGSNGGGPRTTSATATPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDIS 180

Query: 181 YNHKLGYVNGHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240
           YNHKLGY+NGHYTQMYPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF
Sbjct: 181 YNHKLGYMNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPF 240

Query: 241 AAVPPTSIMSKPTTVGPNPVCLVVE 266
           AAVPP+SIMSKP +VGPNPVCLVVE
Sbjct: 241 AAVPPSSIMSKPASVGPNPVCLVVE 263

[Close]

BLAST of Pay0002647 vs. TAIR 10
Match: AT3G54770.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 221.5 bits (563), Expect = 8.2e-58
Identity = 140/265 (52.83%), Postives = 168/265 (63.40%), Query Frame = 0


Query: 9   TTNSNTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGY 68
           TT++N N G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGY
Sbjct: 2   TTSNNVN-GCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGY 61

Query: 69  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNGGG 128
           GFVTFKDA++A +ACEDS PIINGRRANCNLASLG R    +S + T PQ         G
Sbjct: 62  GFVTFKDAKAATRACEDSTPIINGRRANCNLASLGGRL--RKSPTMTSPQQ--------G 121

Query: 129 PRTTTAATAP--GNHVQWYYPAGTHPAPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG 188
           P+    AT P  GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G
Sbjct: 122 PKNGNRATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPFYGY-PS-AYVAPNMTFNQKVG 181

Query: 189 YV-----NGHYTQMYP-----------------GQAAMVG-ANTLMPMYPLYHYHQSHAM 248
           YV     NG+Y QM P                 G   MVG A+ ++P Y +Y YHQS A+
Sbjct: 182 YVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQSQAI 241

[Close]

BLAST of Pay0002647 vs. TAIR 10
Match: AT3G54770.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 173.7 bits (439), Expect = 2.0e-43
Identity = 111/231 (48.05%), Postives = 133/231 (57.58%), Query Frame = 0


Query: 41  MRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLA 100
           M DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLA
Sbjct: 1   MYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAATRACEDSTPIINGRRANCNLA 60

Query: 101 SLGARRGGSRSASATPPQAPQPGSNGGGPRTTTAATAPGNHVQWYYPAGTHPAPFHHQPH 160
           SLG R        ATPP                     GNH QWYYP+G        Q H
Sbjct: 61  SLGGRLRPKNGNRATPPHV-------------------GNHSQWYYPSGFTNQQHQQQNH 120

Query: 161 QPVPFYGYSPSPTYIATDISYNHKLGYV-----NGHYTQMYP-----------------G 220
           Q VPFYGY PS  Y+A ++++N K+GYV     NG+Y QM P                 G
Sbjct: 121 QAVPFYGY-PS-AYVAPNMTFNQKVGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGG 180

Query: 221 QAAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS 248
              MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Sbjct: 181 GRVMVGAASPMVPFYTVYPYHQSQAIGF------PQPSFSKPLSFSTPPIS 204

[Close]

BLAST of Pay0002647 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.7e-37
Identity = 99/235 (42.13%), Postives = 125/235 (53.19%), Query Frame = 0


Query: 20  GDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESA 79
           GDTT TKVFVGGLAWET KE M+ HF++FGEILEAV+I+DK +GRSKGYGFVTF++AE+A
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 80  KKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNGGGPRTTTAATAPG 139
           + AC D+ P+I+GRRANCNLASLG +R        + P  P  G  GGG           
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQR--------SKPSTPNHG--GGGRINNMRVMMST 127

Query: 140 NHVQWYYPAGTHPAPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYVNGHYTQMY-- 199
               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y  
Sbjct: 128 MQTGFGPPPPPQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGN 187

Query: 200 ---PGQAAMVGANTLMPMY---------------PLYHYHQSHAMGMPAHIFPPS 234
               G      A +  P Y               P YH+  S+    P H  PP+
Sbjct: 188 RNSGGGGLTAAAASATPFYPCGGGHGGVQFSQPQPFYHHLSSY---NPHHYSPPT 229

[Close]

BLAST of Pay0002647 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-36
Identity = 102/244 (41.80%), Postives = 128/244 (52.46%), Query Frame = 0


Query: 20  GDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESA 79
           GDTT TKVFVGGLAWET KE M+ HF++FGEILEAV+I+DK +GRSKGYGFVTF++AE+A
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 80  KKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNGGGPRTTTAATAPG 139
           + AC D+ P+I+GRRANCNLASLG +R        + P  P  G  GGG           
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQR--------SKPSTPNHG--GGGRINNMRVMMST 127

Query: 140 NHVQWYYPAGTHPAPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYVNGHYTQMY-- 199
               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y  
Sbjct: 128 MQTGFGPPPPPQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGN 187

Query: 200 ---PGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPT 258
               G      A +  P YP    H       P   F    ++  P    PPT  M +  
Sbjct: 188 RNSGGGGLTAAAASATPFYPCGGGHGGVQFSQP-QPFYHHLSSYNPHHYSPPTFSMQQGV 240

[Close]

BLAST of Pay0002647 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 149.4 bits (376), Expect = 4.0e-36
Identity = 102/244 (41.80%), Postives = 128/244 (52.46%), Query Frame = 0


Query: 20  GDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGYGFVTFKDAESA 79
           GDTT TKVFVGGLAWET KE M+ HF++FGEILEAV+I+DK +GRSKGYGFVTF++AE+A
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 80  KKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNGGGPRTTTAATAPG 139
           + AC D+ P+I+GRRANCNLASLG +R        + P  P  G  GGG           
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQR--------SKPSTPNHG--GGGRINNMRVMMST 127

Query: 140 NHVQWYYPAGTHPAPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYVNGHYTQMY-- 199
               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y  
Sbjct: 128 MQTGFGPPPPPQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGN 187

Query: 200 ---PGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPT 258
               G      A +  P YP    H       P   F    ++  P    PPT  M +  
Sbjct: 188 RNSGGGGLTAAAASATPFYPCGGGHGGVQFSQP-QPFYHHLSSYNPHHYSPPTFSMQQVC 240

The following BLAST results are available for this feature:

BLAST of Pay0002647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	1.2e-56	52.83	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q5ZJX4	9.2e-22	56.47	RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1	[more]
Q6GQD3	3.5e-21	50.49	RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1	[more]
Q9I8B3	3.5e-21	50.49	RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1	[more]
Q5ZMA3	3.5e-21	50.49	RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2	[more]

BLAST of Pay0002647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BD62	1.1e-145	98.87	probable RNA-binding protein ARP1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A1S3BEI0	2.4e-142	98.84	probable RNA-binding protein ARP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5A7SY01	7.1e-142	98.46	Putative RNA-binding protein ARP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0KNL6	2.4e-137	96.15	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175910 PE=4 SV...	[more]
A0A6J1CCJ5	1.5e-120	86.54	probable RNA-binding protein ARP1 OS=Momordica charantia OX=3673 GN=LOC111010248...	[more]

BLAST of Pay0002647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445853.2	2.2e-145	98.87	PREDICTED: probable RNA-binding protein ARP1 isoform X2 [Cucumis melo]	[more]
XP_008445852.2	5.0e-142	98.84	PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo]	[more]
KAA0034049.1	1.5e-141	98.46	putative RNA-binding protein ARP1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011654915.1	2.1e-140	96.24	probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus] >KAE8647967.1 hyp...	[more]
XP_038891950.1	9.8e-138	93.96	probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]	[more]

BLAST of Pay0002647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54770.1	8.2e-58	52.83	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G54770.2	2.0e-43	48.05	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.3	4.7e-37	42.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.1	3.0e-36	41.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.2	4.0e-36	41.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 26..98 e-value: 2.2E-23 score: 93.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 27..84 e-value: 1.1E-17 score: 63.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 25..102 score: 17.25057
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..115 e-value: 2.3E-24 score: 87.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..136
None	No IPR available	PANTHER	PTHR48024:SF23	RNA-BINDING PROTEIN ARP1-RELATED	coord: 12..258
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 12..258
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 25..100 e-value: 3.03457E-42 score: 137.361
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 23..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002647.1	Pay0002647.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding