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Pay0002542 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCCCACAAAATTCTCTGCTTTTGGCCGCATCTTAATGAATACCGTAAACTCTCAAATCCATCCATAGCCTCAATTGGCCTATTCAATCTCCTAATTCCATGGAATCTTCAACAAATCCAACCCCTTTTTCTCTCTACACCATTAACAAATTCCATCACAATCTCTTCCCAATAAAGAACAGAACAAAAAAGGAAAACAAAAATTGGGTCCAAAACCTGAAAATCACCTTTAATGGCTATAATCCACAGTGAAAATCTCCGACTATGAATTTAACAACAACCACAACAACCATGGAAGACTCTCATAAGCTTCAGAACATACCTTCTTTCAAATTGTCACGTTATTCCTCCAGCGCCCGAGACTCCGATGCCGGGGATGACCTCCGATACACTAGCTTGAAAGACATTCTTCTGAATTCGCCGTCGTACAGCGGCGTAAATGATTTCAACGAATTCAATTCGTCAAATATTTCGATCCGAAACGAGCTGGTGAAAAGAGCCGCATCAGCGTACCTTCAATCGGCGGCGATTTTGGTAAGCCGGAATGAAAGCGGTTTCGTCGGATTCTGGGAGAGGCTTAGGATCAAACTCGCCGCCCTCCGTTCCCGCTGGTGTGATTGTTTTCACCGTATTTTTGGCTTCTTTAGTTTTGCCTTAGACTAAGAACATCGTTAGACCTTCC CCTCCCACAAAATTCTCTGCTTTTGGCCGCATCTTAATGAATACCGTAAACTCTCAAATCCATCCATAGCCTCAATTGGCCTATTCAATCTCCTAATTCCATGGAATCTTCAACAAATCCAACCCCTTTTTCTCTCTACACCATTAACAAATTCCATCACAATCTCTTCCCAATAAAGAACAGAACAAAAAAGGAAAACAAAAATTGGGTCCAAAACCTGAAAATCACCTTTAATGGCTATAATCCACAGTGAAAATCTCCGACTATGAATTTAACAACAACCACAACAACCATGGAAGACTCTCATAAGCTTCAGAACATACCTTCTTTCAAATTGTCACGTTATTCCTCCAGCGCCCGAGACTCCGATGCCGGGGATGACCTCCGATACACTAGCTTGAAAGACATTCTTCTGAATTCGCCGTCGTACAGCGGCGTAAATGATTTCAACGAATTCAATTCGTCAAATATTTCGATCCGAAACGAGCTGGTGAAAAGAGCCGCATCAGCGTACCTTCAATCGGCGGCGATTTTGGTAAGCCGGAATGAAAGCGGTTTCGTCGGATTCTGGGAGAGGCTTAGGATCAAACTCGCCGCCCTCCGTTCCCGCTGGTGTGATTGTTTTCACCGTATTTTTGGCTTCTTTAGTTTTGCCTTAGACTAAGAACATCGTTAGACCTTCC ATGAATTTAACAACAACCACAACAACCATGGAAGACTCTCATAAGCTTCAGAACATACCTTCTTTCAAATTGTCACGTTATTCCTCCAGCGCCCGAGACTCCGATGCCGGGGATGACCTCCGATACACTAGCTTGAAAGACATTCTTCTGAATTCGCCGTCGTACAGCGGCGTAAATGATTTCAACGAATTCAATTCGTCAAATATTTCGATCCGAAACGAGCTGGTGAAAAGAGCCGCATCAGCGTACCTTCAATCGGCGGCGATTTTGGTAAGCCGGAATGAAAGCGGTTTCGTCGGATTCTGGGAGAGGCTTAGGATCAAACTCGCCGCCCTCCGTTCCCGCTGGTGTGATTGTTTTCACCGTATTTTTGGCTTCTTTAGTTTTGCCTTAGACTAA MNLTTTTTTMEDSHKLQNIPSFKLSRYSSSARDSDAGDDLRYTSLKDILLNSPSYSGVNDFNEFNSSNISIRNELVKRAASAYLQSAAILVSRNESGFVGFWERLRIKLAALRSRWCDCFHRIFGFFSFALD Homology
BLAST of Pay0002542 vs. ExPASy TrEMBL
Match: A0A5A7UBK0 (Putative E3 ubiquitin-protein ligase arkadia-A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001310 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 5.6e-63 Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of Pay0002542 vs. ExPASy TrEMBL
Match: A0A0A0KKP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524030 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 6.2e-62 Identity = 127/132 (96.21%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of Pay0002542 vs. ExPASy TrEMBL
Match: A0A6J1ISV4 (uncharacterized protein LOC111478115 OS=Cucurbita maxima OX=3661 GN=LOC111478115 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.0e-56 Identity = 115/130 (88.46%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Pay0002542 vs. ExPASy TrEMBL
Match: A0A6J1EJR7 (uncharacterized protein LOC111433238 OS=Cucurbita moschata OX=3662 GN=LOC111433238 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55 Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Pay0002542 vs. ExPASy TrEMBL
Match: A0A6J1CYB8 (uncharacterized protein LOC111015712 OS=Momordica charantia OX=3673 GN=LOC111015712 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.6e-44 Identity = 98/107 (91.59%), Postives = 101/107 (94.39%), Query Frame = 0
BLAST of Pay0002542 vs. NCBI nr
Match: KAA0052530.1 (putative E3 ubiquitin-protein ligase arkadia-A [Cucumis melo var. makuwa]) HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62 Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of Pay0002542 vs. NCBI nr
Match: XP_022977989.1 (uncharacterized protein LOC111478115 [Cucurbita maxima]) HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56 Identity = 115/130 (88.46%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Pay0002542 vs. NCBI nr
Match: XP_023544918.1 (uncharacterized protein LOC111804374 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56 Identity = 115/130 (88.46%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Pay0002542 vs. NCBI nr
Match: XP_022925985.1 (uncharacterized protein LOC111433238 [Cucurbita moschata] >KAG6581442.1 hypothetical protein SDJN03_21444, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55 Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Pay0002542 vs. NCBI nr
Match: KAE8647751.1 (hypothetical protein Csa_003767 [Cucumis sativus]) HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53 Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of Pay0002542 vs. TAIR 10
Match: AT4G18395.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of Pay0002542 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Pay0002542 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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