Pay0002526 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002526
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	S4 RNA-binding domain-containing protein
Location	chr03: 22984131 .. 22992407 (-)
RNA-Seq Expression	Pay0002526
Synteny	Pay0002526

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGTTAGCTCAATCGTCTTCGCTCTCCAATCGTATAAACACGAAGGCGAGTTCGCGAATTCAATAAACTGTTTCACAGAACAAGAATTTCCATTCAAGAAATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCGTTAATCTTCAACCGCATTCGCGCCATTCCTCGTATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATTTGAGTTCAACATCACATTCGCTCCCCCAAAACCCAAGCCCAAATCCGAAGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCGCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAACCCAAGAAGAAGAAGGTTTCTGCTGGTAAACCCATAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGGTTTGTGCTTCTCTAACCAAAATGCTAATTCTGTTACTCTGCATTCCTTTCTGTGTTATGTGCTCTTTTCTTGTTGGTGTTTGGTTCTTGGCGTGGTGGGTAGAAGTCTTGTTATTTTCGGAAACTATTTAGTTATGTCGACAACAGGTTTTGGCAATAGGACGGAAGCAATAGGCATCTACTTCTAGTTTAGTTAGTAGAATTTGTAAGTATAATTGTCAAATCGGTGCTAATTTTGATTTACTTGGCATGAACTTCAAGTTATTCATTACACGTGGATAGAAATGGAGAGATTGAACAAACTGAGCGGTTTCTACACTAGTGTTATGCGGTATACTAGCTTAAATATGGTCTCCATCAACAACTATACTCCAAGAAAAAAGAATCAAAACAGCACGACGGACCCAGACTAACGAAGGCTCTAATAAATTGTGTAGAGGAAAATATAATAGGAGCTTAAGCTCTTGTTGGAATGCAACGTATGTGACTCTTTCTTTAGGGGCGGATCCTTTCAATTCGTTCAGTTGCATTCTTTCACGAGTGGATATATCTTTTCAAGTCTTAACCAACTTGAAGAAGGGTCATATTTTTTTAGAAACATTTGCTTTTATTGAGAAAGAACGAAATAATATAAGACAATAAAAAGAACCAAGCCCACAAAAGCTCTACCAAAAGAAAGAGTTTCCAACTAGGTAAAATAGTGCGAGAGTAACTTGAAGATGGGACATGATTATTTGGATGACCACTAATTAATCTATAGTATATATCTTATTCAAATTGGATCTTAACCTTTTTCACTAGTACTATTTTCAATGAGACTTTTTCACTTTTTATTTATGAAGTCGTTGACAATTGGTTTATTCTCCACAAAGTTGAATTAATTGGATATTGTGAACGAGGTACTGATTTGTTGGGCTTAGACTCTCTTCTGTGTACAAGGTTCGGTATTTTCTGATTTTTGGTGATATTATTCATATGACAGCTTCATAGAACACTAGGGCAGATGTTCTTTATTCAATTTAGTAAAAGAAACTTCAGTACAATGAAAGATGGACAGATTATCAATCTGGAAATAAAACACAAATACTATAAAAAAAAACCAGAACAACACTCTGTTATCCTTCTCTCAAGGATGAACTGCCCACTCACAAAATAACCAAAATCCCCCTCACAGACTCCTCTCCTTCCCTTAAACTACCCCTTCCCTCCTCAACCGTAAGACTCAAAAACTGTAAAAATAACAGCACTATCCTAACCGAAGACTAAATAGTAAAACAGTCCCCGAGTTCACCCCGAGATTGCCCCGAGTTACAACAATCCACCCTGAGATTGGCCGAGATTGTCTCGAGTTACAACATTTCACCCCGAGATTGTCCCGAGTTACATTAGAACTACCCAATAACTTCTGACATCTCTTTCTTCTTTCTCCTACTATATTGAAATAATATTGGAAGTCTAACACAGCTCTTCCATCTCGAACCTTCTATTATTCTTTGTTCTTGCAACATCTACTTATTTGTGGCCTTATATTTTTCTCACCGTCTATGCATACTTTCTGATTTTGCATGTTCGGTAGTCTGTGATCTTTTATTTGCTATTGGTTAGGTTTAAGGGAAATTCTTCTCTTTGAGTTCCATTCTCATAGTAAAACCACGAATGGCCGACTATGTAAATTGACATGTACCGTAAAAATGCGTTTGGCAGGCCATGGTAACAAGATCAATTGTTTATAAAATTAATGTTGGAACATGTTGGATAATGCGTTTTGTAAGCCATGGTGTACTCTCTCAAAGCTCTTCGGCAACTACAGCATCCAAAATCTAAATTTAAATTGGAGTGCTTTTATTTTTACAGCTTGATAATGGATCTTTTGTCTTTATTGTACTGTTTTTGAATTCTCCTTCTTCTGCGTTACTATTACTTTGTATTAGATCTTTTAATAGTCAAGATTTTCATTTTGAAAGCTCCAGATTTATGAGGGCACTAAGGGGGTGTCAACCTAGTTGAGATGTTTGAGTGCGCTAGTTGATCCTTTATAAAAAGCTATTGTACAATCCACTCGTACTCTAAGCTTTTGTCTCATTTTGACTTATTAATAAAGAGACTTGTTTCCGTTAAAAAAAAACATTTGGCCCAAGAGAAAGAAAGAGGTAGAGATATCTTGTGGAGGTCTGGACTACAACCTGGTTAATATTTGCTCCCCTTTTGGTATTTGTTTTAAAAGTTGTATTTATCCTCTATCCATTCTCCCCAACAACTGGATCCTTTTTTACAATGGTAGGCACTTAAGTTGGAATCTTTATATAGAATACCTTGTTGTTTCTAGCTAGCCTCAATCCCTGTTAGGACGGGGGCTGATGAAAATTCAGTTGTATACAATTTGGTCGAGCTTGTAAGGATAAATTTTTATTTTTATTTATTATTTTTATTTTTTGTGTTCTATTGTTTAGCATTGGTCATGGAGTGTTCTGTTTCGTCTTCCTCTGCAGTGTCCTTTTATATATTAAAACAATTGCTTTCATTATGAAAAAAATGAAAGAATATAGTGGCGTACAAAAAAACAAGCCCACAAAATGAAAGGGTTCTAGCTAAGTAAATTGTTTCATAGAGCATAGTTTAAAAAAAAACTTCAAAACAGAAGCCTAAAGGGACACATAAAATCTCACCATAGATCAAAGCTCACAAGGGTTCTTGTCCCTACCGCTAAACACTCTATCATTCCTCTCCCTCAATATTCCAAACAATTGCACACACCCCAACAAGCCACAAAAAACTGTCTCTCTCTCTAAAAGGCGGATGGAGGAGAAACTTCTCGATTTCTGCACAAACATCTCTCTGCCCAGCAATGTCCTGTTTACAGTAATTACCATTGTGCTCTTAAGATCTCATAGTTGGTATTATACTCGTTTTTCAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGGTTGGTTTTTATGTAATTTGGGTTGTATGGATTTTGTCTCAACTATGAAGGTATAAATGATTTCACCTTTCTGCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTAGGTCACTTATTCTCTAAGACCAATTTCCCTTTCCTACCCCAAGCTTCTCTTGGGAACTTGGCTTTTATGTTCTTCCGTTGCTAATCTATAAAGGAATGCCATGGCAGGTATATTTGTTCATCTGGGAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGTACGTCAAACTCAAACCTACTGATCATACCGTTTTCAAGCAAAAGAGTGATAACCTTATGATCATTTTGATGGAAGAAATATAGTTTGCAAGTTATTGAACTACAACTTTGCATTTGCAGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGTATGCTATACATACTTCTCATGGTTGCCTCCTTATTTAGGATTGCTGTACAAAAGGTTTGGAGTTTAAAGGATAGATCTTGAACCCTTTGCAAAATTACCATTGGTTTTCTTTTTCAGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAGTAAGTGATTTAAATTTATTTCCATACTCTTTCTAATGCATTGTAAAGGTAACTACAGAAGTAACTTCTGGCATTATTTTCAGGGAGTAATCTAGAGATAAACTGTTTTGAAAAAATCTTTGAGAGTATATATGAGGAATTGTGGGTTATGGCCTATAAATCTGTGGCGTATTTATTGAATGAAAATTACTGGAACCTTTATCTACTGACTATTTCAGGGATGAGAAATATTGTACCGATCTTCTTTTTTAGTTCTTTTTTCCTTATAATATTTTGCATTAGAGCATTTACTCTTTTATATTGTGCTTCCCAGTACATATAGCTTTTAAAGTTTTGAATGTTGGATTTCTGAAATATTAAAATGTAACATTTGCCCTCTATAATTGTAGATACATTGCAGCAATAGATGGCGATGTTAGTAAGCAGAACCTGATAGCAATTAGTGAGGGAACAACAATTGATGGTGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTGCTTTGTCCATTCATATTATATATTTTAAATATCTATTCACTTTCAGTGCGTTCATCACTTCTTGTTTGATCTAATTGGTCATGAAGTAATGATTATATAGAACAACAAAGTCTGCTGCCTTTTACCTTAAATGCTTTTCTTTATCTGTACTCTATTATTGTTGATGCCATACAGCAGTCTGTGGAGGAAAATTTATTAATACCATTTTTTCTGCATGCAGCGCTTGTCATGCATTAGCTTCCGACTAACTTATTGTGCTTTTGCAGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGGTTAGCATTTGTTCTGACCTTAGAAGACTGTGCCCATTGCTGTGAGGAAGAAGAAATGTTTCATTACTTTTCTCATGATACTTTCTTAACAATAACGATAAAATGAGGAAGAAGAAATGTTTCATTTCTTTCTGGGGGCATTGATGTATCTTTTTGTTCTTGTTGGTACCTCTGTACTGTAGGCCTTTGTTATAGGTAACTATAGTTCTTCATGAAATATTTTTTTTTGAACTTATAAATATAAACATGTATTTACCTACCTCGTGTGAGTTTTTTTTCCTGCCATTTATTCATGATAGCTACACTATATACTGGGACATGAGGAAACTGGGAATATGACATCGAGGGAGATATCTTTTTAGTGCCATTTTAACTACTTGTTCTATTGCTTGCGTTTGTCTGCTAGTTCTATTTGCATGTGTAATTTCTGGAATTTATTGAAACAGATCTATTCTTTAAAGCGTGTAAGGATCGGTGGCTACAGACTTCCATCAGATTTGGGGTAATTTCTTGTTGTGATCACCTTTGATTTGTTTCTTATTTGTCAAACTTATTACTGTTTGGGAATGGGTACAAAATCAGATTAGATGATTCACTTACAAATCATTTTCACACAACAGAAACCAAGTAATAAAGGTAAATAATTTCTCCTATTTTGCATGTAAGTATTCGGAAATGTTGGTGACTAGTATGTTTCAGCATATTATAACTATGATATGCTGTCAGAAAACTAACCAAATAAAAACACCTTTTCAATTGAACAACGAAGATTTTAAAAGTTTATTCTTGAAGATAAATTGAAAATAAAACAATTTTAATCCTTAAAATAAAATTTATCACAAATCATGATCTGGATATAATTCATTCTCTCTGTCCTCAGAGTCTTTCTTCAAGAATTCCCTTTTTATCTTTGGCCACAACCGTCAAGATTGTGCAACAAATTTTCATTTTTTTTACAGTTTTTCGGGGTGAAACTAGAAAGACTTTGAAGTTTTAGCTGCTTACTTGTGAACATGAGTGAGATAAATGTGTTGGCATGTAGATTTATTAAAAATTTCTGCATTATTTCAGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGAGTTTCTGATGATTTCAGAGTCGTCCATAGTTGTTGAAGCTTGAATGTGGTAGGAATGATTTCAGACATACCACATGGAAGCCGAGTACTACTTCTCTAACTGCTGGGACAGTATCGACATTTGAAGAGGTTGGATGCTGTTTATTCCAGCTCACGCTTCACACCATGGCCACTGATTATTTAGAATTATGCTTGAGTTGAAGATTTCAATCAACAACATTGAAGGTGCAGGTTGTCAACCATCAAATTTTATAGATAATACGAATGACGTGCGATACCATTCTATTATCCAATTATTCTCATCTCATTGTGTATTATACTGAACAGTAAAGGAACATACAGGTAGTTGCAATGATGCTTTTTCTCTCACCTCACTGAAAGCGAGTGTGGGAGGGTATTCTAACACCCGGCCTTAATCTTGTATTCATTACTCATATATGACTTCACATTTAATTATATTCTTTTCTCAACTCTCTTTAGTCATCTACTCCTGCTTACAAACGCTTCCAGCAGATGCATAGTATCAACATTGCGGACAGATGAGGTTTCTGTATGAAGCTCATAGAAAAGCTTCGTTTAGCAAAGAAATATCTTATATGGATTGCAAGTTCAACATGCTCTGACTTTGAAAGCTTGTATGTTAGAAGGTAAGAGCCTTTACTGACAATATCCTTTCATTTTGTTCTTAACAAAAAAAAAAAAAAAAAAATCCGTTCATTTTGTTGTTTTTATCTCTTGCATCTATGCCTAATAGAATACAACATATAGTACGAATTTTCCTGGTCTCTATATGACTGTCATCCTATAAGTCTTCTGACTAGTTTTATGTTCTCGATATATTACGCTTCATTTGATTGAAATAAGATTTGCAGTACTGGATCATGTTAAACTAGAAAACTGAAATAAGGATGATCGAAAACAATACTTGAACGGAATGGGGGATTGGAAACAATTTCAAATAAAATATCCAGTGAGTGGGGTGGGGGGGGGGGGGGGGGGCAATAAAAAATCCAAGACGAGCCGATGTGCAACCCAATCAGTTGAAAAAAATACAAATGCACCATAGGGTAGCAGGGTGACATAAAAGGATAGAAGAATAGATAGTTGTAAAACGGATTGACGTTGCAAGAAACCCACACATAAGGGGAAAACTAAACAAAGCAACAATCCCATACACCCCAAAAGCAGGAGAGGAATCAAGCCAAAAACACTCATAGGTAACTCATCACAAAGCCAAAAAGAGGAAGGGAGATATCACAGAGCTAGTAATGGCGTTCAAACCGACAAAGACTCCTCTCGAAGCAAAGATCTAGCCGTTTAATCAAAAGAGATAGAGCTTTCTAGCTTAACTTTCTATTCAGTCCAGCAATTCATTCTTTTTTTTCAAGGTCCATGTTCTTTCTAAAATAACTTGAGATCTGGGAACATGGATTTTGCTCTAATCCCACATATCCAAGACCATAACTGGCCTATTTCTTAGCTTTGTAACTTGTTAGCTTAACTTTCTATTTAGTCCTGCTAGCTTCAATTTTATTAAGATCTATGTACTATTTGAAATAACTTGAGATCTGGTAACATGGTTTTTGTCCAAATTCCAGCTTGCACCGACTACAAACAAAACTGCCATCCCATGTCAGCTGAATGAAGCAACAGAAAACAAACGGACAGCAGAGCAGAGCCTCTCTTGTTCTACAGTAGCAACAGAATCGTCCTTGAGGTTGACAAAATGGATATTATACAATGGGATTTTCGTACATCCATTAACTCAAACTCCATCAGGTACGAGGTTTGGTATTTCATTTTAACCTTCTTTGTTGTTTTTGCTAGGACTAGAACAAGATTTACCTTGCGGTGTTTGAGCGTTTCTAAAATCGTTAACATCACCTTTACCATTTTTCCAAACTAGTTTGAATCTTATTTTTAATCATTCAAAACTAATTTTTATAATATGAAAATTATATTTACAAAGTGTA

mRNA sequence

AGCGTTAGCTCAATCGTCTTCGCTCTCCAATCGTATAAACACGAAGGCGAGTTCGCGAATTCAATAAACTGTTTCACAGAACAAGAATTTCCATTCAAGAAATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCGTTAATCTTCAACCGCATTCGCGCCATTCCTCGTATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATTTGAGTTCAACATCACATTCGCTCCCCCAAAACCCAAGCCCAAATCCGAAGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCGCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAACCCAAGAAGAAGAAGGTTTCTGCTGGTAAACCCATAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTATATTTGTTCATCTGGGAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCAATAGATGGCGATGTTAGTAAGCAGAACCTGATAGCAATTAGTGAGGGAACAACAATTGATGGTGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCTTTAAAGCGTGTAAGGATCGGTGGCTACAGACTTCCATCAGATTTGGGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGAGTTTCTGATGATTTCAGAGTCGTCCATAGTTGTTGAAGCTTGAATGTGGTAGGAATGATTTCAGACATACCACATGGAAGCCGAGTACTACTTCTCTAACTGCTGGGACAGTATCGACATTTGAAGAGGTTGGATGCTGTTTATTCCAGCTCACGCTTCACACCATGGCCACTGATTATTTAGAATTATGCTTGAGTTGAAGATTTCAATCAACAACATTGAAGGTGCAGGTTGTCAACCATCAAATTTTATAGATAATACGAATGACGTGCGATACCATTCTATTATCCAATTATTCTCATCTCATTGTGTATTATACTGAACAGTAAAGGAACATACAGGTAGTTGCAATGATGCTTTTTCTCTCACCTCACTGAAAGCGAGTGTGGGAGGGTATTCTAACACCCGGCCTTAATCTTGTATTCATTACTCATATATGACTTCACATTTAATTATATTCTTTTCTCAACTCTCTTTAGTCATCTACTCCTGCTTACAAACGCTTCCAGCAGATGCATAGTATCAACATTGCGGACAGATGAGGTTTCTGTATGAAGCTCATAGAAAAGCTTCGTTTAGCAAAGAAATATCTTATATGGATTGCAAGTTCAACATGCTCTGACTTTGAAAGCTTGTATGTTAGAAGCTTGCACCGACTACAAACAAAACTGCCATCCCATGTCAGCTGAATGAAGCAACAGAAAACAAACGGACAGCAGAGCAGAGCCTCTCTTGTTCTACAGTAGCAACAGAATCGTCCTTGAGGTTGACAAAATGGATATTATACAATGGGATTTTCGTACATCCATTAACTCAAACTCCATCAGGTACGAGGTTTGGTATTTCATTTTAACCTTCTTTGTTGTTTTTGCTAGGACTAGAACAAGATTTACCTTGCGGTGTTTGAGCGTTTCTAAAATCGTTAACATCACCTTTACCATTTTTCCAAACTAGTTTGAATCTTATTTTTAATCATTCAAAACTAATTTTTATAATATGAAAATTATATTTACAAAGTGTA

Coding sequence (CDS)

ATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCGTTAATCTTCAACCGCATTCGCGCCATTCCTCGTATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATTTGAGTTCAACATCACATTCGCTCCCCCAAAACCCAAGCCCAAATCCGAAGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCGCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAACCCAAGAAGAAGAAGGTTTCTGCTGGTAAACCCATAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTATATTTGTTCATCTGGGAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCAATAGATGGCGATGTTAGTAAGCAGAACCTGATAGCAATTAGTGAGGGAACAACAATTGATGGTGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCTTTAAAGCGTGTAAGGATCGGTGGCTACAGACTTCCATCAGATTTGGGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGA

Protein sequence

MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS

Homology

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BLAST of Pay0002526 vs. ExPASy Swiss-Prot
Match: Q8L960 (Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SVR1 PE=1 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.4e-143
Identity = 275/422 (65.17%), Postives = 315/422 (74.64%), Query Frame = 0


Query: 5   ASSSLSFLSKPSLIFNRIRAIP---------RISCSLSSNSTPNASSSSSFEFNITFAPP 64
           ASSS+SF +     F +I+A P          + CS+SS      SSS   EF+I+FAPP
Sbjct: 6   ASSSISFAAS----FLKIKAFPLSPRFFPIRTLRCSVSS------SSSEPIEFDISFAPP 65

Query: 65  KPKPKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDET--KPK 124
           KPKP S            T  QLFIPWIVR +DG LKLQS PP R +H+++ D T   PK
Sbjct: 66  KPKPSSTHGGV-------TPQQLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPK 125

Query: 125 KKKVS----------------AGKPITE---PPKHSKAARRFYNENIRESSQRLSKVLAA 184
           KK  S                A  P +     PK SKAARRFYNEN +E  QRLSKVLAA
Sbjct: 126 KKDKSKKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAA 185

Query: 185 AGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNK 244
           AGVASRR+SEELIF G+VTVNG +CNTPQTRVDP+RDIIYVNGNR+PKKLPPKVY ALNK
Sbjct: 186 AGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNK 245

Query: 245 PKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGD 304
           PKGYICSSG+KE KS ISLFD+YL SWDK  PG PKPRLFTVGRLDVATTGLI+VTNDGD
Sbjct: 246 PKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGD 305

Query: 305 FAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRP 364
           FAQ +SHPSS L KEYI  + GD+ K++L+AISEGT ++GVHC PDSVEL+P+Q DI R 
Sbjct: 306 FAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRA 365

Query: 365 RLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGW 397
           RLRIVVHEGRNHEVRELVK AGLE++SLKRVRIGG+RLPSDLGLG + ELKQS+LKA+GW
Sbjct: 366 RLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGW 410

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BLAST of Pay0002526 vs. ExPASy Swiss-Prot
Match: O67444 (Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1464 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-33
Identity = 94/255 (36.86%), Postives = 137/255 (53.73%), Query Frame = 0


Query: 147 RLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPP 206
           R++K L+ AGVASRR +E+LI  GRV VNG V  +   +V+P  DI+ V+G   P K   
Sbjct: 5   RINKFLSEAGVASRRKAEKLILEGRVKVNGEVVRSLGVKVNPEVDIVEVDGK--PVKPQR 64

Query: 207 KVYLALNKPKGYICSSGKKES--KSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATT 266
           K Y+ LNKP  Y+   G+     K++  L  D               R+F VGRLD  T 
Sbjct: 65  KRYIILNKPCCYLTQLGRSPDGRKTIEELIKDI------------PERVFPVGRLDYNTE 124

Query: 267 GLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVEL 326
           GL+I+TNDG+ A  I HP   L K Y+A ++G V ++ L  + +G  ++     PD++ +
Sbjct: 125 GLLILTNDGELANRILHPRYKLPKVYLALVEGKVDQKTLKRMKQGIELEDGFAKPDNIRI 184

Query: 327 LPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTEL 386
           +  + +     L I  HEGR H V+  + A G ++  LKR+ IG  +L   L  G + EL
Sbjct: 185 V--RYEGKNTLLEITFHEGRKHLVKRFLGAFGHKVKRLKRIAIGPIKL-GKLSPGKWREL 242

Query: 387 KQSDL----KAIGWK 396
            Q +L    KA+G K
Sbjct: 245 NQGELAQLFKAVGLK 242

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BLAST of Pay0002526 vs. ExPASy Swiss-Prot
Match: P35159 (Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) OX=224308 GN=rluB PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 4.7e-30
Identity = 84/247 (34.01%), Postives = 131/247 (53.04%), Query Frame = 0


Query: 146 QRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLP 205
           +RL KV+A AGVASRR +EELI  G+V VNG V      +V    D I VNG ++ ++ P
Sbjct: 2   ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKV-TGSDQIEVNGLKVEREEP 61

Query: 206 PKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTG 265
             VY  L KP+G I ++   + + V++   D+ K+  +        R++ +GRLD  T+G
Sbjct: 62  --VYFLLYKPRGVISAAQDDKGRKVVT---DFFKNIPQ--------RIYPIGRLDYDTSG 121

Query: 266 LIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELL 325
           L+++TNDG+FA  + HP   + K Y+A + G   K+ L  +  G  ++     P   +LL
Sbjct: 122 LLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLERGIRLEEGKTAPAKAKLL 181

Query: 326 PRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELK 385
                     +++ +HEGRN +VR + +A G E+  LKR       L   L  G   EL 
Sbjct: 182 SLDKKKQTSIIQLTIHEGRNRQVRRMFEAIGHEVIKLKREEYAFLNL-RGLHTGDARELT 233

Query: 386 QSDLKAI 393
             ++K +
Sbjct: 242 PHEVKRL 233

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BLAST of Pay0002526 vs. ExPASy Swiss-Prot
Match: Q9HZ55 (Ribosomal large subunit pseudouridine synthase B OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rluB PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-28
Identity = 87/247 (35.22%), Postives = 128/247 (51.82%), Query Frame = 0


Query: 146 QRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLP 205
           ++L KVLA  GV SRR  E  I  GRV VNGSV +  Q RVD + D I V+G+ + ++  
Sbjct: 14  EKLQKVLARLGVGSRRDVEVWIAEGRVNVNGSVASLGQ-RVD-SHDAITVDGHLIRREEA 73

Query: 206 P---KVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVA 265
               +  L  NKP+G +C+    E +  I  FD          P     R   VGRLD+ 
Sbjct: 74  AESVRRVLIYNKPEGEVCTRDDPEGRPTI--FD--------RLPRLRTGRWINVGRLDIN 133

Query: 266 TTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSV 325
           TTGL++ T DG+ A  + HPS  + +EY   + G+V+++ +  +  G  ++        +
Sbjct: 134 TTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVTEEMIERLLNGVMLEDGPAKFSDI 193

Query: 326 ELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYT 385
           +  P     +      VV EGRN EVR L ++ GL +  LKRVR G   L S+L +G Y 
Sbjct: 194 QQAPGGEGFNH-WYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLTSELTMGRYR 247

Query: 386 ELKQSDL 390
           E+ Q ++
Sbjct: 254 EMDQREI 247

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BLAST of Pay0002526 vs. ExPASy Swiss-Prot
Match: O66829 (Uncharacterized RNA pseudouridine synthase aq_554 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_554 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-28
Identity = 80/247 (32.39%), Postives = 131/247 (53.04%), Query Frame = 0


Query: 147 RLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPP 206
           RL K L+ +   SR+ ++ELI  GRV V+G V    + RV    ++     +  PKK   
Sbjct: 2   RLDKYLSKSLHISRKEAKELIREGRVKVSGKVVKQAEYRVKEGEEVEVEGKSVKPKK--- 61

Query: 207 KVYLALNKPKGYICSSGK-KESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTG 266
            VYL L KPKGY+ ++ + K+  S + L  ++           P  +LF+ GRLDV   G
Sbjct: 62  NVYLMLYKPKGYLSTTEEDKKYPSFLELIREHF----------PSRKLFSAGRLDVDAEG 121

Query: 267 LIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELL 326
           L+++T+DG+ A  ++HP   + KEYI  +D D+  + L  + E      V      V+L+
Sbjct: 122 LLLITDDGELAHRLTHPKWKVEKEYIVRLDRDIGDEELKKLYE------VKLEEKPVQLV 181

Query: 327 PRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELK 386
            +   +S   ++ ++ EGR+H V+ L KA G  +  LKR R+G  RL  ++  G + EL 
Sbjct: 182 -KAEKLSGDTVKAILTEGRHHVVKRLFKAVGHNVVYLKRTRVGNLRLDENMEPGEWRELT 228

Query: 387 QSDLKAI 393
           + ++K +
Sbjct: 242 EEEVKEL 228

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BLAST of Pay0002526 vs. ExPASy TrEMBL
Match: A0A1S3C3I9 (uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 2.7e-222
Identity = 395/396 (99.75%), Postives = 396/396 (100.00%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           S+VEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396

[Close]

BLAST of Pay0002526 vs. ExPASy TrEMBL
Match: A0A1S4E166 (ribosomal large subunit pseudouridine synthase B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 1.1e-210
Identity = 376/377 (99.73%), Postives = 377/377 (100.00%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           S+VEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLG 378
           SLKRVRIGGYRLPSDLG
Sbjct: 361 SLKRVRIGGYRLPSDLG 377

[Close]

BLAST of Pay0002526 vs. ExPASy TrEMBL
Match: A0A6J1BVE6 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006060 PE=3 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 1.3e-200
Identity = 364/399 (91.23%), Postives = 375/399 (93.98%), Query Frame = 0


Query: 1   MVSLAS--SSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPK 60
           M SLA+  SSLS LSKPS I N IRAIPRISCSLSSNS PNASSSS  EFNITFAPPKPK
Sbjct: 1   MASLAAALSSLSILSKPSFILNPIRAIPRISCSLSSNSAPNASSSSPLEFNITFAPPKPK 60

Query: 61  PKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKSE++ PFQFID NTGGQL IPWIVRGEDGNL+LQSHPPTRFL SMSE ETKP++KK S
Sbjct: 61  PKSEIQHPFQFIDPNTGGQLLIPWIVRGEDGNLQLQSHPPTRFLQSMSEAETKPRRKKGS 120

Query: 121 AGKPITE-PPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGS 180
           A K + E PPKHSKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGS
Sbjct: 121 ADKRVPEPPPKHSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGS 180

Query: 181 VCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240
           VCNTPQTRVDPARD+IYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY
Sbjct: 181 VCNTPQTRVDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240

Query: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGD 300
           LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDG 
Sbjct: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGA 300

Query: 301 VSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGL 360
           VSKQNLIAISEGT IDGVHCTPDSVELLPRQPD+SR RLRIVVHEGRNHEVRELVKAAGL
Sbjct: 301 VSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDVSRSRLRIVVHEGRNHEVRELVKAAGL 360

Query: 361 EIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           EIYSLKRVRIGG+RLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 EIYSLKRVRIGGFRLPSDLGLGSYTELKQSDLKAIGWKS 399

[Close]

BLAST of Pay0002526 vs. ExPASy TrEMBL
Match: A0A6J1GVH4 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457913 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 5.2e-197
Identity = 357/398 (89.70%), Postives = 370/398 (92.96%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPN--ASSSSSFEFNITFAPPKPK 60
           MVSLA+SSLS LSKPSLI N IRAI RISCSLSSNS PN  +SSSSS EFNITFAPP PK
Sbjct: 1   MVSLAASSLSVLSKPSLILNPIRAISRISCSLSSNSAPNGSSSSSSSLEFNITFAPPTPK 60

Query: 61  PKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+ +D FQFID+NTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSE E KPKKKKVS
Sbjct: 61  PKSKTDDSFQFIDQNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEAEAKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
             K + EPPK+SKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 VDKRVPEPPKYSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARDIIYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVI+LFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPSKVYLALNKPKGYICSSGKKESKSVINLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSW KTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSG+SKEYIAAIDG V
Sbjct: 241 KSWHKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGISKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLI ISEGT IDGVHC PD+VELLP+QPDI R RLRI VHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLITISEGTVIDGVHCIPDAVELLPQQPDIPRSRLRITVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           IYSLKRVRIGG+RLPSDLGLGSY ELKQSDLKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYIELKQSDLKAIGWKS 398

[Close]

BLAST of Pay0002526 vs. ExPASy TrEMBL
Match: A0A6J1JT41 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487252 PE=3 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 2.0e-196
Identity = 356/398 (89.45%), Postives = 369/398 (92.71%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPN--ASSSSSFEFNITFAPPKPK 60
           MVSLA+SSLS LSKPSLI N IRAI RISCSLSSNS PN  +SSSSS EFNITFAPP PK
Sbjct: 1   MVSLAASSLSVLSKPSLILNPIRAISRISCSLSSNSAPNGSSSSSSSMEFNITFAPPTPK 60

Query: 61  PKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+ +D FQFID+NTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSE E KPKKKKVS
Sbjct: 61  PKSKTDDSFQFIDQNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEAEAKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
             K + EPPK+SKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 VDKRVPEPPKYSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARDIIYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVI+LFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPSKVYLALNKPKGYICSSGKKESKSVINLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSW KTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSG+SKEYIAAIDG V
Sbjct: 241 KSWHKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGISKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLI ISEGT IDGVHC PD+VELLP+QPDI R RLRI VHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLITISEGTVIDGVHCIPDAVELLPQQPDIPRSRLRITVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           IYSLKRVRIGG+RLPSDLGLGSY ELKQ DLKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYIELKQCDLKAIGWKS 398

[Close]

BLAST of Pay0002526 vs. NCBI nr
Match: XP_008456519.1 (PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 [Cucumis melo])

HSP 1 Score: 780.8 bits (2015), Expect = 5.6e-222
Identity = 395/396 (99.75%), Postives = 396/396 (100.00%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           S+VEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396

[Close]

BLAST of Pay0002526 vs. NCBI nr
Match: XP_004140075.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Cucumis sativus] >KGN48104.2 hypothetical protein Csa_003766 [Cucumis sativus])

HSP 1 Score: 748.0 bits (1930), Expect = 4.0e-212
Identity = 382/398 (95.98%), Postives = 387/398 (97.24%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNA--SSSSSFEFNITFAPPKPK 60
           MVSLASSSL  LSKPSLIFN IRAIPRISCSLSSNS PNA  SSSSS EFNITFAPPKPK
Sbjct: 1   MVSLASSSLLLLSKPSLIFNPIRAIPRISCSLSSNSKPNASSSSSSSLEFNITFAPPKPK 60

Query: 61  PKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKSEVEDPFQFIDRN+GGQLFIPWIVRGEDGNLKLQSHPPTRFLHS+SEDETKPKKKKVS
Sbjct: 61  PKSEVEDPFQFIDRNSGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSVSEDETKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
           AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV
Sbjct: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQ ISHPSSGLSKEYIAAIDG V
Sbjct: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLIAISEGT IDGVHCTPDSVELLPRQPDIS+ RLRIVVHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           IYSLKRVRIGG+RLPSDLGLGSYTELKQS+LKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYTELKQSELKAIGWKS 398

[Close]

BLAST of Pay0002526 vs. NCBI nr
Match: XP_016901969.1 (PREDICTED: ribosomal large subunit pseudouridine synthase B isoform X2 [Cucumis melo])

HSP 1 Score: 742.3 bits (1915), Expect = 2.2e-210
Identity = 376/377 (99.73%), Postives = 377/377 (100.00%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           S+VEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLG 378
           SLKRVRIGGYRLPSDLG
Sbjct: 361 SLKRVRIGGYRLPSDLG 377

[Close]

BLAST of Pay0002526 vs. NCBI nr
Match: XP_038884576.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Benincasa hispida])

HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 378/398 (94.97%), Postives = 384/398 (96.48%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNA--SSSSSFEFNITFAPPKPK 60
           MVSLASSSLSFLSKPS I N IRAIPRISCSLSSNSTPNA  SSSSS EFNITFAPPKPK
Sbjct: 1   MVSLASSSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPK 60

Query: 61  PKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKSEVE PFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS
Sbjct: 61  PKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
           A K  TEPPKHSKAARRFYNENIR++SQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 ADKRPTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARD+IYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVISLFDDYL
Sbjct: 181 CNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSWDKTYPGQPKPRLFTVGRLDVATTGLI+VTNDGDFAQSISHPSSGLSKEYIAAIDG V
Sbjct: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLIAISEGT IDG+HCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           IYSLKRVRIGG+RLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYTELKQSDLKAIGWKS 398

[Close]

BLAST of Pay0002526 vs. NCBI nr
Match: XP_022133495.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Momordica charantia])

HSP 1 Score: 708.8 bits (1828), Expect = 2.7e-200
Identity = 364/399 (91.23%), Postives = 375/399 (93.98%), Query Frame = 0


Query: 1   MVSLAS--SSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPK 60
           M SLA+  SSLS LSKPS I N IRAIPRISCSLSSNS PNASSSS  EFNITFAPPKPK
Sbjct: 1   MASLAAALSSLSILSKPSFILNPIRAIPRISCSLSSNSAPNASSSSPLEFNITFAPPKPK 60

Query: 61  PKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKSE++ PFQFID NTGGQL IPWIVRGEDGNL+LQSHPPTRFL SMSE ETKP++KK S
Sbjct: 61  PKSEIQHPFQFIDPNTGGQLLIPWIVRGEDGNLQLQSHPPTRFLQSMSEAETKPRRKKGS 120

Query: 121 AGKPITE-PPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGS 180
           A K + E PPKHSKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGS
Sbjct: 121 ADKRVPEPPPKHSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGS 180

Query: 181 VCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240
           VCNTPQTRVDPARD+IYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY
Sbjct: 181 VCNTPQTRVDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240

Query: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGD 300
           LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDG 
Sbjct: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGA 300

Query: 301 VSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGL 360
           VSKQNLIAISEGT IDGVHCTPDSVELLPRQPD+SR RLRIVVHEGRNHEVRELVKAAGL
Sbjct: 301 VSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDVSRSRLRIVVHEGRNHEVRELVKAAGL 360

Query: 361 EIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           EIYSLKRVRIGG+RLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 EIYSLKRVRIGGFRLPSDLGLGSYTELKQSDLKAIGWKS 399

[Close]

BLAST of Pay0002526 vs. TAIR 10
Match: AT2G39140.1 (pseudouridine synthase family protein )

HSP 1 Score: 510.8 bits (1314), Expect = 1.0e-144
Identity = 275/422 (65.17%), Postives = 315/422 (74.64%), Query Frame = 0


Query: 5   ASSSLSFLSKPSLIFNRIRAIP---------RISCSLSSNSTPNASSSSSFEFNITFAPP 64
           ASSS+SF +     F +I+A P          + CS+SS      SSS   EF+I+FAPP
Sbjct: 6   ASSSISFAAS----FLKIKAFPLSPRFFPIRTLRCSVSS------SSSEPIEFDISFAPP 65

Query: 65  KPKPKSEVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDET--KPK 124
           KPKP S            T  QLFIPWIVR +DG LKLQS PP R +H+++ D T   PK
Sbjct: 66  KPKPSSTHGGV-------TPQQLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPK 125

Query: 125 KKKVS----------------AGKPITE---PPKHSKAARRFYNENIRESSQRLSKVLAA 184
           KK  S                A  P +     PK SKAARRFYNEN +E  QRLSKVLAA
Sbjct: 126 KKDKSKKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAA 185

Query: 185 AGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNK 244
           AGVASRR+SEELIF G+VTVNG +CNTPQTRVDP+RDIIYVNGNR+PKKLPPKVY ALNK
Sbjct: 186 AGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNK 245

Query: 245 PKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGD 304
           PKGYICSSG+KE KS ISLFD+YL SWDK  PG PKPRLFTVGRLDVATTGLI+VTNDGD
Sbjct: 246 PKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGD 305

Query: 305 FAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRP 364
           FAQ +SHPSS L KEYI  + GD+ K++L+AISEGT ++GVHC PDSVEL+P+Q DI R 
Sbjct: 306 FAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRA 365

Query: 365 RLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGW 397
           RLRIVVHEGRNHEVRELVK AGLE++SLKRVRIGG+RLPSDLGLG + ELKQS+LKA+GW
Sbjct: 366 RLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGW 410

[Close]

BLAST of Pay0002526 vs. TAIR 10
Match: AT3G43340.1 (Pseudouridine synthase family protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-26
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 304 IAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLK 363
           +AISEGT ++G+HC PD VEL+P+Q DI R  LRIVVHEGRNHEVRELVK  GLE+ SLK
Sbjct: 1   MAISEGTMVEGIHCVPDLVELMPKQHDIPRAWLRIVVHEGRNHEVRELVKNVGLEVDSLK 60

Query: 364 RVRIGGYRLPSDLG 378
           RVRIGG RLPSDLG
Sbjct: 61  RVRIGGVRLPSDLG 74

The following BLAST results are available for this feature:

BLAST of Pay0002526 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L960	1.4e-143	65.17	Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=A...	[more]
O67444	1.6e-33	36.86	Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain V...	[more]
P35159	4.7e-30	34.01	Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 16...	[more]
Q9HZ55	2.0e-28	35.22	Ribosomal large subunit pseudouridine synthase B OS=Pseudomonas aeruginosa (stra...	[more]
O66829	2.0e-28	32.39	Uncharacterized RNA pseudouridine synthase aq_554 OS=Aquifex aeolicus (strain VF...	[more]

BLAST of Pay0002526 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3I9	2.7e-222	99.75	uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 OS=Cucumis melo OX...	[more]
A0A1S4E166	1.1e-210	99.73	ribosomal large subunit pseudouridine synthase B isoform X2 OS=Cucumis melo OX=3...	[more]
A0A6J1BVE6	1.3e-200	91.23	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=M...	[more]
A0A6J1GVH4	5.2e-197	89.70	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=C...	[more]
A0A6J1JT41	2.0e-196	89.45	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=C...	[more]

BLAST of Pay0002526 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456519.1	5.6e-222	99.75	PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 [Cucumi...	[more]
XP_004140075.1	4.0e-212	95.98	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Cuc...	[more]
XP_016901969.1	2.2e-210	99.73	PREDICTED: ribosomal large subunit pseudouridine synthase B isoform X2 [Cucumis ...	[more]
XP_038884576.1	1.4e-209	94.97	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Ben...	[more]
XP_022133495.1	2.7e-200	91.23	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Mom...	[more]

BLAST of Pay0002526 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39140.1	1.0e-144	65.17	pseudouridine synthase family protein	[more]
AT3G43340.1	4.2e-26	75.68	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 146..205 e-value: 8.3E-14 score: 61.9
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 146..188 e-value: 5.9E-11 score: 41.9
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 146..213 e-value: 2.42942E-10 score: 54.1778
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 142..202 e-value: 4.6E-18 score: 66.2
IPR006145	Pseudouridine synthase, RsuA/RluA-like	PFAM	PF00849	PseudoU_synth_2	coord: 209..350 e-value: 6.7E-16 score: 58.8
IPR042092	Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain	GENE3D	3.30.70.1560		coord: 286..371 e-value: 2.0E-46 score: 159.6
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 209..388 e-value: 2.0E-46 score: 159.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..130
None	No IPR available	PANTHER	PTHR47683	PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED	coord: 35..395
None	No IPR available	PROSITE	PS50889	S4	coord: 146..215 score: 14.281917
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 112..228
IPR018496	Pseudouridine synthase, RsuA/RluB/E/F, conserved site	PROSITE	PS01149	PSI_RSU	coord: 257..271
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 208..388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002526.1	Pay0002526.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000488	maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process	GO:0000489	maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process	GO:0032544	plastid translation
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016866	intramolecular transferase activity