Pay0002413 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002413
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic
Location	chr10: 3107888 .. 3114001 (+)
RNA-Seq Expression	Pay0002413
Synteny	Pay0002413

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATATTTAGTTTAAAACATTTTAGGCATAATTAAGCAAATTGCACTGCAGCTCGAAGTTGAACCCAAGTGCTCGAGCGCGGGCGGTGGGTTGTCTCCCCTTGGGCTTGAGTCCAGATCCCGGCAAATTAGTTAATTATCGTTGTACTTCGTTGCAATGGAAGCGGGAATTTTCTTCGCCGTCACTCCAATTCCATGGACTTCCAATTTCAAGCGCACTCACTCTTCCCTTCGTCGTTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCCACTTCACAGCGAAGTTACAGGGGCCCGAAGCCTTCAACTGATTTGGTGGCCGATTGGGTGTCCAACAACGATGATACCGTTCGGAGTTCGCCCATTTACGTCGGTGGAATTTCTCTCTTGCTCGTGCTCTTTAATCGCGCCGTTTCCGGCATTGCTCCCGTCGCCGATGCCAGCAGGTTCGTTCAAGTTAAACCAATTTATCCATTATCGAATGCTGTTTACTTCCACTAGTCAATTTGTATTTGCTTTTTCTGGAATATTATAAATGCATCGCTATAATTAGTTTTAAATTGAGAGAAGAAATCAATAATTCGTTGAGGCAAGAATGGAAATTCTAATCTTCGATAATGGTGCTTTCCTAATTTGGTGGGATTGTTCTGCAAATAATATTTGCTTTGAGCTTGTTCTTTACGTAATTGGTTGTTCTATTTATATTGATGAACTTTTTTAATTCCGGCAGTTCACAGTCAAGAGCTGATCTGTTAACCCTAGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTGAGGAGTTTACGATAAGATTTTCATACTTAACCTCTCCTCTCTCGCTGCAACAATCAGCTCAGGAGTAGCCTGTTTCTACTTATTTTCTTATTTGTTACCCCTAATTTCATTTTCCGTATCAGGTAAATCCACTAGGAGTAGAATATGAGTGGATTTGCTCCAGTCTCCCTGATCGTGTAACATCTGAGTTGTTATGGTAAAGACTATAGAATTTTCCTCTATGATATTTTAAAACTGTGTCGCTAAGATCATTGAAAATCACCTTTTGATACTTGGGATGTTTGGTTGGCTTAGTTAATGGAGATTGATGAGCGAAACATGATGGTTTTGGAATTGTATAATCCATATGTCATTTTGTCTCCCCTCATTGTCACATGATCGTGCAAATTTTTAATGATGGAGAAAGCCAACTTCATATGCCATGTATCTCATAAAAAGGGAAATCCTGGACTAGGTGGTAAATGGTTACTTTTTGCTGCCATTACGTAGGGTATGGAAGTCTCTGTCAGAAGTAACATGCTGCCGGTCTCTGGTTGTTGTTTATGATGGCAAGTGTATACTTCAAGTTGGTTTTGCTGCTGAATCAGCCGAGGGTGATGGTGAGGCTGAACGTGTTGAAGCTGGTAAACTGATGCAGGGATTGCTCTATAAGGGAGTCCTCAAATCTCAAGCTCGTGAGTAGTAAATGACCTGTGCACAGAGACCATCACAGAATGTACTACTTGATTGCCGTGCAGTTGTAAATATCTGTAACCATTCGTTTTGAGAAACTATCCTTCCTATTTCTGCAGAGAGCTACTTGGCCAATCTCTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGTACTTTGCTTAATACTATCCAGGTCGCTGTTAGATTTGTTCCTTTTTTCTGTTTTCTTATCTTTCTAGAATAATCAACTGGTACACAGCTTTACAGTGCTTCATTTTTTGGCATTTATTACTCTTATAAATAATATAACTAGCAGACATATAAACTAATTGGGAGTTCAGAGGTCTTTTCTATGCCCACTTACTCTTCTTGTTCGTTGGAACGAGGGTCTGCTACTCGGTAAAGTACAGAGGAATGAGATAAATTTTTCTATTCAATTTGTATTTTTTGAGGTTCTATCAGTTAAATAGGATTTATTTCCTCACTTGGTTACTTATGGGCTTCCTTATTTGGAAGGCGGTAGCCAATTTAATACCTGAAAACTTGGAATTTTGTCAGTCCTAAGAGACTGTAGCTGGTCTGTTGATCTGTTTCTAATAAACTAATCGTCATTGAACTTGAGCTCCCTTGCTCACACTGTGTTTGTGAAGGTGGAATTATTTTCTTTAGAAGTGAAAAAGATTAACTAATAATAATAACCATGAAAACAAAGTATGGAAAAATAGCTTTATGAACAACAGTTGTGAAGTGTATTTTACTTCCTTTTCTTTTTGAGAAGGAAGGAAAGAATGTATAGATTCAACTTCTATACCTCCAGCATCTCTCTCTCATATTCTTAGATGATCTTTGCTGTTGTAAGAATTCCAATGAGCTCTGTCTTCGCCTTCAACTTCATCAGCATACTTTACATCACCGCATCTTTGGGGTACTCTATTCAATCCATTTTGGCTCAGTTTGTAATACTACATATATGATATACATACAAATGAGGAATACAGAAGAACATGAACTTGGTACCGCGTGTTTGTGCACAGTACATCATACTCGTATACAGGCACATTATTAAATTGAAACCACTGCTTTCTAACAAAAACCTGTTATTCTAGGCTGTAATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAGTTGGCGGCAACACAATTAGGGGTTTCACAACTTCTGATCAGGTACTCTTTTTTCTTTTACTGAGACTAGTCAATATTCGTGGATTTTGTTTCTCTCAACGAGGCACTTGTGAAAATCGGTCCTCAACACTGATTTATCTGTTACCAGTTTGAATAAATACAACTACCTGTCTGTTTGCCAAAATCCCTAATTTCAACTTCTTTAACCCCCCAACCATCTATTGCACATATCGTCTATGTATATCACCTTTCCTTCTGTGGCATGATTATAGTTTCCTGCTTGAAAATTGAAATGTTACACAGGCATGGATTTCATTGGTTGGAGAGAAGCTGGATGCTACTCTGTTGAAGTATTCAAATAATTTTCAACCAGCGGCGAAATTGAGTTCAAACGGGAACTGAAACCAACACAATATGGTTATTAGTTTGGACATTTTATTAGTTTTTAATGTTTGTTGAACCCTAGGGTTGGAAAAGAAATAATATTGATGTGAAAGGCAGGCGAAGTAGCTCCACTAAGTAGTTGATGTATATGTATATTCGGTACATCATAAATGCAAAAGGTTCTCCTTTTTCAATTATTGATTCTTGATGTATTCACTAATTGGAGGTGATGACTAATGACTGCTTCTTTTCTTTTTCCTCTTTTTAATGCATTTTCTTTGTCTGTGGTAATGCGGGGTGCATTTTTGTAAAGATATGTAACATAGCAGACAGATGATTTATTCAAATTTGAAGTATGAATCATAAAGAATTTCATTCCAACATCTGAAAACTGTGAGTTAAAAACCTGTAACTAAAACAATATCATGTGCATGGAGTAAAAAATTAATCAGTAAAACATTTCTTTTGTAGCAAAAAATTCAGTTGCTTGCTGTATGATTACTGTGTACAGGTCACTAAGCTGCAGGTTGCCAAGACTTATTAACCAGAAGCTTTCTCCCACGGTAGATACCCTGTCAAAGGATCAGAGAACAAAGTCTGGATAAAATCTCTCAGTCCAGTATCCCAAACTTCACAGAACTGTAACCTCCAATTAGGTGGTTCAATTGCCTCTGTTCCAAGCCCTGGTGCTCTATCCTTCGACCCTTCATTTTGTGCCTCCTGCCAATCAACAACATAGGTAGCTACTCTTCTGAAAAATTTAGCTCGAAAAGTTTCCCACACTTGATACTTGTAATGGTTTATGACGGCATTGCTTTTTGGGACATCAAAGAATCCAAATCCTCGTTTCAACCTAAAGTGGTGAACGATATTGAGAAGTGTTATGTCTAGCAAGTCTGGCCGGACAAACGACTTGTGTCTCTCAGGACTCTGAAGCCGGCAAGTGTACCCCATTGTTACTCCCTGTGGTGGATGTGATGTTAAACCCGATGGCCCAAAGCTATGGCAGGCCGTTCTAATTTCAGCAATGACTGTTGAATTGGAACTTGAAGCAGATGACTCGGCAATGAGAGAATGAAGTGCATTACGACCAGCAGTATGGTACTCTCGCTGATGGCGATACTTTGAAGGGAAGTAGAAAAACTCGTCAACATCAAAGAAACCAACCCACTTGCATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAACCAGCTTCTTGAGTTTTAAGCCATGGCCAGGTAAGCCTACTGATATTGTAATCTTCCAGGTTGAGCTCTCTAATGACTTCTTCGATGTTATCATCACTATTGTTGTCGTAGATGAACCAGCGCCCCACTCCAAGCCAGGCATGGTACATAATCCACTCACGAAGTGCTGCTGCTTGATTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCCTGATTTCTTTGCAGGTCACTCAGTTTGGAGTTGAAGAGTCTGGCCACTGATGGCAGAGTCACCTGTAGATGGGTTTTACTATTGATACTGCCGCGGCTCACTGTAACACGAATTCCCTTTTCCTTGTCTAAACTGCTCGGCACACCAGCTGGCAAGGAGCATCGGATAATTTCTTGAGCTGCAGCTACTGCTTTTGTGGTATGCACGTATTCTCCGTTATTGTTGGAATTCCCCAGTCTAAAGTGGCAGCTGAATTCAGCCGGATTTGATTCCCTGTGTGGTCGGAGATTTAGTCCCTTGGCAAATACCACAACCGTAATACCATCAATTGCTGCCTCATAAACTACCCTCTCCCACGAAGCAACTGGGTGCCTATTTCTGACCAACCAATGATCATCAGCTTCCACGCCGCCCCTCCTCAAGTCCACGGCGGAGGCTGAGTAATTCAGTGGGGGTAATGGACATCTGGCAATCGATCGGAACTCATCGTACTTATCCGTGGATAGAACAGACTGTTTGAGAGTCTCATGGTTCAAACCTCTAGCGACAGATTTGTGGTACAAACAATCCAATTTCTCGTCTCGGCCGAATTCGCCGGAGACCATCAAAAGCAAATGGTCTGGGAACAGGACTCGACTTTCAATTTTCAAAGGCGAATACTTACTGCTCAAAGAATTGTCAAGTGTGGACTTGCTAGCTGAGGTGGACAGCCGGGAAAGAGTGGTGGAAGAAGCATCGAGAACTGGCCGGAACGACGCCGCCGCAATCGAGAACCACCTACTCGATGAAAGAAACAAGAGAAAAGCAAAAAAAGAGAGACAAAGAAACAGAGATCTCCGGGTAAAGAACTGTACATGCGAACTCGACCTCCCAAAACGCTTCCTTTTCCGCCGTTGCTGTTCCCAATCCATTAATCCTAACCAGAATCCAAAATTCCCTCCGAACCCAAATCAAAAAAAGGCTCAACTTCGGTGTAGATCCGGTCAGATGAAGCAGAATCTGAGTTCGTCGATGAAGCTCTTCCGATAACCTATATCTTGTCTGTTTGTCGGAAGAGGTGGCTGTAATTACTGGAAAACGGAGTTTATTAGCTAAAACTAAAAAGATAGAAGCTGCTTGATTGCTTACTGCTTGGAGATGGTACTTTATTCACAAAGAGGTAGCGTGAACATCACTCTCTCTTCTCTCTCTCTTTCTCTTGTCTTGCTCTTGTTGCCAGACCAGACCAGACCATCGAATTTCCTCTTTTTCTTTTTCGAAAGAAATATTATATTTTTTTGAAAACTGAAAAATACCCCTTTTACTATTTTAATTCTCAATTTGGCCCATACCATTACCACCACACCACATGCCGGCTTTTATGCTTTTTTTCCCCATTCTTGTAAACCCTTTTGTCAAACAAGCCGTGTTTTTGTTCAGAAGAGTAAATGATTAGCTGGAAAATAGACTTTTAGCCTCTTACACAATACTCAGTTCCCGTTTCTTAATGAGGTTTAACTCCTTAATTATGTCTTCAACTATTCGATTCTCATAAATTGCAAAGAAATCCTTGAGATTTTATGTTTTTGTGTAAAACCCCCCAATTTGTTTATTTAATTATAGACCCATTTCTTGGAACCTTCGAATGAAA

mRNA sequence

ATTATATTTAGTTTAAAACATTTTAGGCATAATTAAGCAAATTGCACTGCAGCTCGAAGTTGAACCCAAGTGCTCGAGCGCGGGCGGTGGGTTGTCTCCCCTTGGGCTTGAGTCCAGATCCCGGCAAATTAGTTAATTATCGTTGTACTTCGTTGCAATGGAAGCGGGAATTTTCTTCGCCGTCACTCCAATTCCATGGACTTCCAATTTCAAGCGCACTCACTCTTCCCTTCGTCGTTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCCACTTCACAGCGAAGTTACAGGGGCCCGAAGCCTTCAACTGATTTGGTGGCCGATTGGGTGTCCAACAACGATGATACCGTTCGGAGTTCGCCCATTTACGTCGGTGGAATTTCTCTCTTGCTCGTGCTCTTTAATCGCGCCGTTTCCGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTGTTAACCCTAGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACTAGGAGTAGAATATGAGTGGATTTGCTCCAGTCTCCCTGATCGTGTAACATCTGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTAACATGCTGCCGGTCTCTGGTTGTTGTTTATGATGGCAAGTGTATACTTCAAGTTGGTTTTGCTGCTGAATCAGCCGAGGGTGATGGTGAGGCTGAACGTGTTGAAGCTGGTAAACTGATGCAGGGATTGCTCTATAAGGGAGTCCTCAAATCTCAAGCTCAGAGCTACTTGGCCAATCTCTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAGTTGGCGGCAACACAATTAGGGGTTTCACAACTTCTGATCAGGCATGGATTTCATTGGTTGGAGAGAAGCTGGATGCTACTCTGTTGAAGTATTCAAATAATTTTCAACCAGCGGCGAAATTGAGTTCAAACGGGAACTGAAACCAACACAATATGGTTATTAGTTTGGACATTTTATTAGTTTTTAATGTTTGTTGAACCCTAGGGTTGGAAAAGAAATAATATTGATGTGAAAGGCAGGCGAAGTAGCTCCACTAAGTAGTTGATGTATATGTATATTCGGTACATCATAAATGCAAAAGGTTCTCCTTTTTCAATTATTGATTCTTGATGTATTCACTAATTGGAGGTGATGACTAATGACTGCTTCTTTTCTTTTTCCTCTTTTTAATGCATTTTCTTTGTCTGTGGTAATGCGGGGTGCATTTTTGTAAAGATATGTAACATAGCAGACAGATGATTTATTCAAATTTGAAGTATGAATCATAAAGAATTTCATTCCAACATCTGAAAACTGTGAGTTAAAAACCTGTAACTAAAACAATATCATGTGCATGGAGTAAAAAATTAATCAGTAAAACATTTCTTTTGTAGCAAAAAATTCAGTTGCTTGCTGTATGATTACTGTGTACAGGTCACTAAGCTGCAGGTTGCCAAGACTTATTAACCAGAAGCTTTCTCCCACGGTAGATACCCTGTCAAAGGATCAGAGAACAAAGTCTGGATAAAATCTCTCAGTCCAGTATCCCAAACTTCACAGAACTGTAACCTCCAATTAGGTGGTTCAATTGCCTCTGTTCCAAGCCCTGGTGCTCTATCCTTCGACCCTTCATTTTGTGCCTCCTGCCAATCAACAACATAGGTAGCTACTCTTCTGAAAAATTTAGCTCGAAAAGTTTCCCACACTTGATACTTGTAATGGTTTATGACGGCATTGCTTTTTGGGACATCAAAGAATCCAAATCCTCGTTTCAACCTAAAGTGGTGAACGATATTGAGAAGTGTTATGTCTAGCAAGTCTGGCCGGACAAACGACTTGTGTCTCTCAGGACTCTGAAGCCGGCAAGTGTACCCCATTGTTACTCCCTGTGGTGGATGTGATGTTAAACCCGATGGCCCAAAGCTATGGCAGGCCGTTCTAATTTCAGCAATGACTGTTGAATTGGAACTTGAAGCAGATGACTCGGCAATGAGAGAATGAAGTGCATTACGACCAGCAGTATGGTACTCTCGCTGATGGCGATACTTTGAAGGGAAGTAGAAAAACTCGTCAACATCAAAGAAACCAACCCACTTGCATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAACCAGCTTCTTGAGTTTTAAGCCATGGCCAGGTAAGCCTACTGATATTGTAATCTTCCAGGTTGAGCTCTCTAATGACTTCTTCGATGTTATCATCACTATTGTTGTCGTAGATGAACCAGCGCCCCACTCCAAGCCAGGCATGGTACATAATCCACTCACGAAGTGCTGCTGCTTGATTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCCTGATTTCTTTGCAGGTCACTCAGTTTGGAGTTGAAGAGTCTGGCCACTGATGGCAGAGTCACCTGTAGATGGGTTTTACTATTGATACTGCCGCGGCTCACTGTAACACGAATTCCCTTTTCCTTGTCTAAACTGCTCGGCACACCAGCTGGCAAGGAGCATCGGATAATTTCTTGAGCTGCAGCTACTGCTTTTGTGGTATGCACGTATTCTCCGTTATTGTTGGAATTCCCCAGTCTAAAGTGGCAGCTGAATTCAGCCGGATTTGATTCCCTGTGTGGTCGGAGATTTAGTCCCTTGGCAAATACCACAACCGTAATACCATCAATTGCTGCCTCATAAACTACCCTCTCCCACGAAGCAACTGGGTGCCTATTTCTGACCAACCAATGATCATCAGCTTCCACGCCGCCCCTCCTCAAGTCCACGGCGGAGGCTGAGTAATTCAGTGGGGGTAATGGACATCTGGCAATCGATCGGAACTCATCGTACTTATCCGTGGATAGAACAGACTGTTTGAGAGTCTCATGGTTCAAACCTCTAGCGACAGATTTGTGGTACAAACAATCCAATTTCTCGTCTCGGCCGAATTCGCCGGAGACCATCAAAAGCAAATGGTCTGGGAACAGGACTCGACTTTCAATTTTCAAAGGCGAATACTTACTGCTCAAAGAATTGTCAAGTGTGGACTTGCTAGCTGAGGTGGACAGCCGGGAAAGAGTGGTGGAAGAAGCATCGAGAACTGGCCGGAACGACGCCGCCGCAATCGAGAACCACCTACTCGATGAAAGAAACAAGAGAAAAGCAAAAAAAGAGAGACAAAGAAACAGAGATCTCCGGGTAAAGAACTGTACATGCGAACTCGACCTCCCAAAACGCTTCCTTTTCCGCCGTTGCTGTTCCCAATCCATTAATCCTAACCAGAATCCAAAATTCCCTCCGAACCCAAATCAAAAAAAGGCTCAACTTCGGTGTAGATCCGGTCAGATGAAGCAGAATCTGAGTTCGTCGATGAAGCTCTTCCGATAACCTATATCTTGTCTGTTTGTCGGAAGAGGTGGCTGTAATTACTGGAAAACGGAGTTTATTAGCTAAAACTAAAAAGATAGAAGCTGCTTGATTGCTTACTGCTTGGAGATGGTACTTTATTCACAAAGAGGTAGCGTGAACATCACTCTCTCTTCTCTCTCTCTTTCTCTTGTCTTGCTCTTGTTGCCAGACCAGACCAGACCATCGAATTTCCTCTTTTTCTTTTTCGAAAGAAATATTATATTTTTTTGAAAACTGAAAAATACCCCTTTTACTATTTTAATTCTCAATTTGGCCCATACCATTACCACCACACCACATGCCGGCTTTTATGCTTTTTTTCCCCATTCTTGTAAACCCTTTTGTCAAACAAGCCGTGTTTTTGTTCAGAAGAGTAAATGATTAGCTGGAAAATAGACTTTTAGCCTCTTACACAATACTCAGTTCCCGTTTCTTAATGAGGTTTAACTCCTTAATTATGTCTTCAACTATTCGATTCTCATAAATTGCAAAGAAATCCTTGAGATTTTATGTTTTTGTGTAAAACCCCCCAATTTGTTTATTTAATTATAGACCCATTTCTTGGAACCTTCGAATGAAA

Coding sequence (CDS)

ATGGAAGCGGGAATTTTCTTCGCCGTCACTCCAATTCCATGGACTTCCAATTTCAAGCGCACTCACTCTTCCCTTCGTCGTTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCCACTTCACAGCGAAGTTACAGGGGCCCGAAGCCTTCAACTGATTTGGTGGCCGATTGGGTGTCCAACAACGATGATACCGTTCGGAGTTCGCCCATTTACGTCGGTGGAATTTCTCTCTTGCTCGTGCTCTTTAATCGCGCCGTTTCCGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTGTTAACCCTAGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACTAGGAGTAGAATATGAGTGGATTTGCTCCAGTCTCCCTGATCGTGTAACATCTGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTAACATGCTGCCGGTCTCTGGTTGTTGTTTATGATGGCAAGTGTATACTTCAAGTTGGTTTTGCTGCTGAATCAGCCGAGGGTGATGGTGAGGCTGAACGTGTTGAAGCTGGTAAACTGATGCAGGGATTGCTCTATAAGGGAGTCCTCAAATCTCAAGCTCAGAGCTACTTGGCCAATCTCTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAGTTGGCGGCAACACAATTAGGGGTTTCACAACTTCTGATCAGGCATGGATTTCATTGGTTGGAGAGAAGCTGGATGCTACTCTGTTGAAGTATTCAAATAATTTTCAACCAGCGGCGAAATTGAGTTCAAACGGGAACTGA

Protein sequence

MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSNNDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVWLSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQVGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN

Homology

[Close]

BLAST of Pay0002413 vs. ExPASy Swiss-Prot
Match: Q6NQK9 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB4 PE=1 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-103
Identity = 199/288 (69.10%), Postives = 233/288 (80.90%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRA-SSSTSQ--RSYRGPKPSTDLVADW 60
           MEA I      IPW++N + +H  L   FPR IRA SSSTSQ  ++Y GPKP  +LVAD+
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSNNDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAG 120
           +S NDD VRS PIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+L G
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKC 180
           LVWLSIRPKSITPVNP GVE + + S LP  + SELLW W+SL   TCC+SLV+VY+G C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 ILQVGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPS 240
           ++Q+G  AES E D +   V+  KLMQG +Y+GV+KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA++GGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

[Close]

BLAST of Pay0002413 vs. ExPASy TrEMBL
Match: A0A5A7ST12 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00590 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 2.2e-163
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN
Sbjct: 1   MEAGIFFTVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW
Sbjct: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ
Sbjct: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAE AEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAELAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN
Sbjct: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300

[Close]

BLAST of Pay0002413 vs. ExPASy TrEMBL
Match: A0A1S3BFC6 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489053 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 2.2e-163
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN
Sbjct: 1   MEAGIFFTVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW
Sbjct: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ
Sbjct: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAE AEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAELAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN
Sbjct: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300

[Close]

BLAST of Pay0002413 vs. ExPASy TrEMBL
Match: A0A0A0KQF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603980 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.2e-151
Identity = 279/300 (93.00%), Postives = 285/300 (95.00%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF +T IPWT NFKRTHSSLR SFP I+RASSSTSQRSYRGPKPST+LVADWVSN
Sbjct: 1   MEAGIFFPLTSIPWTFNFKRTHSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSN 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           NDDTVRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW
Sbjct: 61  NDDTVRSLPIYVGGISLLIVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNPLGVE E ICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPLGVENERICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGTCIFQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEG+GEAE VEAGKLMQG LYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGNGEAEHVEAGKLMQGSLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWIS VGEKLDATL KYSNNFQPAAKLSS GN
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISFVGEKLDATLSKYSNNFQPAAKLSSKGN 300

[Close]

BLAST of Pay0002413 vs. ExPASy TrEMBL
Match: A0A6J1J9M5 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482990 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.3e-141
Identity = 265/300 (88.33%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPS D VA+WVS 
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAE VEA KLMQGLLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of Pay0002413 vs. ExPASy TrEMBL
Match: A0A6J1H029 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458387 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.3e-141
Identity = 265/300 (88.33%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPSTD VA+WVS 
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAE VEA KLMQG LYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of Pay0002413 vs. NCBI nr
Match: XP_008446278.1 (PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucumis melo] >KAA0034354.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 [Cucumis melo var. makuwa] >TYK15565.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 [Cucumis melo var. makuwa])

HSP 1 Score: 584.7 bits (1506), Expect = 4.5e-163
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN
Sbjct: 1   MEAGIFFTVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW
Sbjct: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ
Sbjct: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAE AEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAELAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN
Sbjct: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300

[Close]

BLAST of Pay0002413 vs. NCBI nr
Match: XP_004135215.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucumis sativus])

HSP 1 Score: 543.9 bits (1400), Expect = 8.8e-151
Identity = 279/300 (93.00%), Postives = 285/300 (95.00%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF +T IPWT NFKRTHSSLR SFP I+RASSSTSQRSYRGPKPST+LVADWVSN
Sbjct: 1   MEAGIFFPLTSIPWTFNFKRTHSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSN 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           NDDTVRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW
Sbjct: 61  NDDTVRSLPIYVGGISLLIVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNPLGVE E ICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPLGVENERICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGTCIFQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEG+GEAE VEAGKLMQG LYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGNGEAEHVEAGKLMQGSLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWIS VGEKLDATL KYSNNFQPAAKLSS GN
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISFVGEKLDATLSKYSNNFQPAAKLSSKGN 300

[Close]

BLAST of Pay0002413 vs. NCBI nr
Match: XP_038892078.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 521.9 bits (1343), Expect = 3.6e-144
Identity = 270/300 (90.00%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPI W+SNFKRTH  +RRSFPRIIR SSSTSQ SYRGPKPS D VADWVS 
Sbjct: 1   MEAGIFFPVTPILWSSNFKRTHCPVRRSFPRIIRVSSSTSQGSYRGPKPSRDWVADWVSK 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           NDD VRS PIYVGGISLLLVLFNR VSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW
Sbjct: 61  NDDAVRSLPIYVGGISLLLVLFNRTVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSI+PKSITPVNP GV  E ICSSLPD V SELLWVW SLSEVTCCRSLVVVYDGKCI Q
Sbjct: 121 LSIKPKSITPVNPQGVACERICSSLPDIVKSELLWVWTSLSEVTCCRSLVVVYDGKCIFQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAE VEAGKLMQG LY G LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEAGKLMQGSLYTGNLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQP AKLSS GN
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPTAKLSSKGN 300

[Close]

BLAST of Pay0002413 vs. NCBI nr
Match: XP_022984820.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 511.5 bits (1316), Expect = 4.8e-141
Identity = 265/300 (88.33%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPS D VA+WVS 
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAE VEA KLMQGLLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of Pay0002413 vs. NCBI nr
Match: XP_022956789.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita moschata] >KAG6601389.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 511.5 bits (1316), Expect = 4.8e-141
Identity = 265/300 (88.33%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60
           MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPSTD VA+WVS 
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120
           N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120

Query: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180
           LSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI Q
Sbjct: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQ 180

Query: 181 VGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEGDGEAE VEA KLMQG LYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300

[Close]

BLAST of Pay0002413 vs. TAIR 10
Match: AT1G59840.1 (cofactor assembly of complex C )

HSP 1 Score: 377.9 bits (969), Expect = 7.7e-105
Identity = 199/288 (69.10%), Postives = 233/288 (80.90%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRA-SSSTSQ--RSYRGPKPSTDLVADW 60
           MEA I      IPW++N + +H  L   FPR IRA SSSTSQ  ++Y GPKP  +LVAD+
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSNNDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAG 120
           +S NDD VRS PIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+L G
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKC 180
           LVWLSIRPKSITPVNP GVE + + S LP  + SELLW W+SL   TCC+SLV+VY+G C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 ILQVGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPS 240
           ++Q+G  AES E D +   V+  KLMQG +Y+GV+KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA++GGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

[Close]

BLAST of Pay0002413 vs. TAIR 10
Match: AT1G59840.2 (cofactor assembly of complex C )

HSP 1 Score: 377.9 bits (969), Expect = 7.7e-105
Identity = 199/288 (69.10%), Postives = 233/288 (80.90%), Query Frame = 0


Query: 1   MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRA-SSSTSQ--RSYRGPKPSTDLVADW 60
           MEA I      IPW++N + +H  L   FPR IRA SSSTSQ  ++Y GPKP  +LVAD+
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSNNDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAG 120
           +S NDD VRS PIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+L G
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKC 180
           LVWLSIRPKSITPVNP GVE + + S LP  + SELLW W+SL   TCC+SLV+VY+G C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 ILQVGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPS 240
           ++Q+G  AES E D +   V+  KLMQG +Y+GV+KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA++GGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

The following BLAST results are available for this feature:

BLAST of Pay0002413 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQK9	1.1e-103	69.10	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidop...	[more]

BLAST of Pay0002413 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ST12	2.2e-163	99.33	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 OS=Cucumis melo var. makuw...	[more]
A0A1S3BFC6	2.2e-163	99.33	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucumis ...	[more]
A0A0A0KQF1	4.2e-151	93.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603980 PE=4 SV=1	[more]
A0A6J1J9M5	2.3e-141	88.33	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]
A0A6J1H029	2.3e-141	88.33	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]

BLAST of Pay0002413 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446278.1	4.5e-163	99.33	PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic ...	[more]
XP_004135215.1	8.8e-151	93.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucumis sa...	[more]
XP_038892078.1	3.6e-144	90.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 ...	[more]
XP_022984820.1	4.8e-141	88.33	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
XP_022956789.1	4.8e-141	88.33	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]

BLAST of Pay0002413 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59840.1	7.7e-105	69.10	cofactor assembly of complex C	[more]
AT1G59840.2	7.7e-105	69.10	cofactor assembly of complex C	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021325	Cofactor assembly of complex C subunit B, CCB2/CCB4	PFAM	PF11152	CCB2_CCB4	coord: 69..278 e-value: 2.5E-58 score: 196.6
IPR044705	COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4	PANTHER	PTHR34943	FAMILY NOT NAMED	coord: 1..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002413.1	Pay0002413.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0009507	chloroplast