Pay0002078 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002078
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	pre-rRNA-processing protein TSR2 homolog
Location	chr06: 3825580 .. 3826105 (-)
RNA-Seq Expression	Pay0002078
Synteny	Pay0002078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCAATTGATGGATTAACCTCAACCAATTACAAGGCGGGATCTGTCTCCAGCCTCCAAATGGCCATTTCATCAGTGTTTTCACGGTGGGACGGCCTTCAAATGGCCATTGAAAATCAATGGGGAGGTCGCGACTCTCACCAAAAATCACTGAATCTCGTCTCAGATGTCTTCTCTTGGTTCTCTTATTCCAAACGTTATTATCCTTCTTCTTTAAATCATCATCCGCCATTCAAACAACCTTCTGCAATAATTTCTTGATGTATGCGTTTTTGCTTCCATTAATGCAGCTCCTTTATACGTGGAAGATCTGGAAAATTTGCTCCATGAAACTCTATTGCTCTCCTTCAACACCGAGATTGAAGACGGCAGCATCGAACAGGTAAACATTCCTTACACTACATCGAGATTACTATGAATTTAACAGAAAATTTTGATGTTTTCTCTTTTTTTATGAAAATTCAAGCAGGTAGCAGAACAATTGATGATGATATACGAGGAAAATTTGGTGGGAAGTCGTTAG

mRNA sequence

ATGGAGCCAATTGATGGATTAACCTCAACCAATTACAAGGCGGGATCTGTCTCCAGCCTCCAAATGGCCATTTCATCAGTGTTTTCACGGTGGGACGGCCTTCAAATGGCCATTGAAAATCAATGGGGAGGTCGCGACTCTCACCAAAAATCACTGAATCTCGTCTCAGATGTCTTCTCTTGGTTCTCTTATTCCAAACCTCCTTTATACGTGGAAGATCTGGAAAATTTGCTCCATGAAACTCTATTGCTCTCCTTCAACACCGAGATTGAAGACGGCAGCATCGAACAGGTAGCAGAACAATTGATGATGATATACGAGGAAAATTTGGTGGGAAGTCGTTAG

Coding sequence (CDS)

ATGGAGCCAATTGATGGATTAACCTCAACCAATTACAAGGCGGGATCTGTCTCCAGCCTCCAAATGGCCATTTCATCAGTGTTTTCACGGTGGGACGGCCTTCAAATGGCCATTGAAAATCAATGGGGAGGTCGCGACTCTCACCAAAAATCACTGAATCTCGTCTCAGATGTCTTCTCTTGGTTCTCTTATTCCAAACCTCCTTTATACGTGGAAGATCTGGAAAATTTGCTCCATGAAACTCTATTGCTCTCCTTCAACACCGAGATTGAAGACGGCAGCATCGAACAGGTAGCAGAACAATTGATGATGATATACGAGGAAAATTTGGTGGGAAGTCGTTAG

Protein sequence

MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR

Homology

[Close]

BLAST of Pay0002078 vs. ExPASy Swiss-Prot
Match: Q3T090 (Pre-rRNA-processing protein TSR2 homolog OS=Bos taurus OX=9913 GN=TSR2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07
Identity = 30/92 (32.61%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 23  AISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENLLHETL 82
           A+ +    W  LQ+A+EN +GG  S +K+  L   V  +F +    L ++++E+ L E +
Sbjct: 15  AVRAALEAWPALQIAVENGFGGVYSQEKAEWLGGAVEEYF-FRNADLELDEVEDFLGELM 74

Query: 83  LLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           +  F+T +EDGS+ QV++QL  ++     G R
Sbjct: 75  MNEFDTVVEDGSLPQVSQQLQTMFHHFQKGDR 105

[Close]

BLAST of Pay0002078 vs. ExPASy Swiss-Prot
Match: Q8C8T8 (Pre-rRNA-processing protein TSR2 homolog OS=Mus musculus OX=10090 GN=Tsr2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07
Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 23  AISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENLLHETL 82
           A+ +    W  LQ+A+EN +GG  S +K+  L   V  +F  +   L +E++E+ L E +
Sbjct: 15  AVRAALEAWPALQIAVENGFGGVHSQEKAEWLGGAVEDYF-IANADLELEEIEDFLGELM 74

Query: 83  LLSFNTEIEDGSIEQVAEQLMMIY 107
              F+T +EDGS+ QV++QL  ++
Sbjct: 75  TTEFDTVVEDGSLPQVSQQLQTMF 97

[Close]

BLAST of Pay0002078 vs. ExPASy Swiss-Prot
Match: Q969E8 (Pre-rRNA-processing protein TSR2 homolog OS=Homo sapiens OX=9606 GN=TSR2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.8e-06
Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 24  ISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENLLHETLL 83
           + +    W  LQ+A+EN +GG  S +K+  L   V  +F      L ++++E+ L E L 
Sbjct: 16  VCAALEAWPALQIAVENGFGGVHSQEKAKWLGGAVEDYF-MRNADLELDEVEDFLGELLT 75

Query: 84  LSFNTEIEDGSIEQVAEQLMMIY 107
             F+T +EDGS+ QV++QL  ++
Sbjct: 76  NEFDTVVEDGSLPQVSQQLQTMF 97

[Close]

BLAST of Pay0002078 vs. ExPASy Swiss-Prot
Match: Q3KRG3 (Pre-rRNA-processing protein TSR2 homolog OS=Danio rerio OX=7955 GN=tsr2 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05
Identity = 26/86 (30.23%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 23  AISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENLLHETL 82
           A+ +V   W  LQ+A++N +GG  S QK+  +V  +  +F+     L  +++E+ + E +
Sbjct: 15  AVRAVLETWPVLQIAVDNGFGGAFSQQKAEWMVDALQQYFT-DNGDLQPDEVEDFISELM 74

Query: 83  LLSFNTEIEDGSIEQVAEQLMMIYEE 109
              F+T ++DGS+ QVA+Q+  ++++
Sbjct: 75  NNEFDTVVDDGSLPQVAQQVCGMFQQ 99

[Close]

BLAST of Pay0002078 vs. ExPASy Swiss-Prot
Match: Q06672 (Pre-rRNA-processing protein TSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TSR2 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-05
Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 0


Query: 21  QMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENLLHE 80
           ++ +S V  +WD L +A+EN WGG DS +K   +   V   F   K    V D   L+ E
Sbjct: 33  ELGVSMVIYKWDALDVAVENSWGGPDSAEKRDWITGIVVDLFKNEK----VVDAA-LIEE 92

Query: 81  TLLLS----FNTEIEDGSIEQVAEQLMMIYEE 109
           TLL +    F T +ED S   +A +++ IY +
Sbjct: 93  TLLYAMIDEFETNVEDDSALPIAVEVINIYND 119

[Close]

BLAST of Pay0002078 vs. ExPASy TrEMBL
Match: A0A5D3D3A3 (Pre-rRNA-processing protein TSR2-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00450 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR
Sbjct: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 114

[Close]

BLAST of Pay0002078 vs. ExPASy TrEMBL
Match: A0A1S3AWZ6 (pre-rRNA-processing protein TSR2 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483709 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR
Sbjct: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 114

[Close]

BLAST of Pay0002078 vs. ExPASy TrEMBL
Match: A0A0A0L7I9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146640 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVS+LQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSNLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           WFS+SKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR
Sbjct: 61  WFSHSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 114

[Close]

BLAST of Pay0002078 vs. ExPASy TrEMBL
Match: A0A1S3AX32 (pre-rRNA-processing protein TSR2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483709 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.7e-55
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIE-QVAEQLMMIYEENLVGSR 115
           WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIE QVAEQLMMIYEENLVGSR
Sbjct: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQQVAEQLMMIYEENLVGSR 115

[Close]

BLAST of Pay0002078 vs. ExPASy TrEMBL
Match: A0A6J1C959 (pre-rRNA-processing protein TSR2 homolog OS=Momordica charantia OX=3673 GN=LOC111009121 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-50
Identity = 104/114 (91.23%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEP DGL STNYKAGSVS LQ AISSVFSRWDGLQMAI+NQWGGRDSHQKSLNL SDVFS
Sbjct: 1   MEPSDGLASTNYKAGSVSGLQTAISSVFSRWDGLQMAIQNQWGGRDSHQKSLNLASDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           WFS SKPPLYVEDLENLLHE+LLLSFNTEIEDGSIEQVAEQLMMIYEE+L GSR
Sbjct: 61  WFSRSKPPLYVEDLENLLHESLLLSFNTEIEDGSIEQVAEQLMMIYEEHLQGSR 114

[Close]

BLAST of Pay0002078 vs. NCBI nr
Match: XP_008438674.1 (PREDICTED: pre-rRNA-processing protein TSR2 homolog isoform X2 [Cucumis melo] >KAA0049359.1 pre-rRNA-processing protein TSR2-like protein isoform X2 [Cucumis melo var. makuwa] >TYK17199.1 pre-rRNA-processing protein TSR2-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 3.1e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR
Sbjct: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 114

[Close]

BLAST of Pay0002078 vs. NCBI nr
Match: XP_004134444.1 (pre-rRNA-processing protein TSR2 isoform X2 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVS+LQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSNLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           WFS+SKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR
Sbjct: 61  WFSHSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 114

[Close]

BLAST of Pay0002078 vs. NCBI nr
Match: XP_008438673.1 (PREDICTED: pre-rRNA-processing protein TSR2 isoform X1 [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 7.6e-55
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIE-QVAEQLMMIYEENLVGSR 115
           WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIE QVAEQLMMIYEENLVGSR
Sbjct: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQQVAEQLMMIYEENLVGSR 115

[Close]

BLAST of Pay0002078 vs. NCBI nr
Match: XP_011650975.1 (pre-rRNA-processing protein TSR2 isoform X1 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 6.5e-54
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           MEPIDGLTSTNYKAGSVS+LQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS
Sbjct: 1   MEPIDGLTSTNYKAGSVSNLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIE-QVAEQLMMIYEENLVGSR 115
           WFS+SKPPLYVEDLENLLHETLLLSFNTEIEDGSIE QVAEQLMMIYEENLVGSR
Sbjct: 61  WFSHSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQQVAEQLMMIYEENLVGSR 115

[Close]

BLAST of Pay0002078 vs. NCBI nr
Match: XP_038881388.1 (pre-rRNA-processing protein TSR2 homolog [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52
Identity = 108/114 (94.74%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 1   MEPIDGLTSTNYKAGSVSSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFS 60
           ME IDGLTSTNYKAGSVSSLQ AISSVFSRWDGLQMAIENQWGGRDSHQKSLNL SDVF+
Sbjct: 1   MESIDGLTSTNYKAGSVSSLQKAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLASDVFA 60

Query: 61  WFSYSKPPLYVEDLENLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 115
           WFS SKPPLYVEDLE LLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR
Sbjct: 61  WFSQSKPPLYVEDLETLLHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGSR 114

[Close]

BLAST of Pay0002078 vs. TAIR 10
Match: AT3G22510.1 (Pre-rRNA-processing protein TSR2, conserved region )

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-25
Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 0


Query: 18  SSLQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENL 77
           S LQ  I  + SRW GLQMA++NQWGG DS +KS  L  ++F   S S   + VE++ENL
Sbjct: 29  SVLQRDIGELLSRWGGLQMAVKNQWGGHDSLKKSQELAHNLFHLISQSN-VITVEEIENL 88

Query: 78  LHETLLLSFNTEIEDGSIEQVAEQLMMIYEENLVGS 114
           LHE+LLLSFNTEIEDGSIE+VAEQLM+++EE+L G+
Sbjct: 89  LHESLLLSFNTEIEDGSIEEVAEQLMILHEEHLRGT 123

[Close]

BLAST of Pay0002078 vs. TAIR 10
Match: AT5G27990.1 (Pre-rRNA-processing protein TSR2, conserved region )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0


Query: 20  LQMAISSVFSRWDGLQMAIENQWGGRDSHQKSLNLVSDVFSWFSYSKPPLYVEDLENL-- 79
           L+  I  +  RW  ++ A+EN WGGRDS  K+   V+ VF +F  SK P  V+D+E L  
Sbjct: 15  LKEGIGLILWRWTAMRAAVENGWGGRDSQAKANETVATVFDFFIQSKDP--VKDIEKLGD 74

Query: 80  LHETLLLSFNTEIEDGSIEQVAEQLMMIYEE 109
           L +  L   NT  EDGS+++VA  L+ +YE+
Sbjct: 75  LLDKGLDELNTTAEDGSVDEVANLLVDLYED 103

The following BLAST results are available for this feature:

BLAST of Pay0002078 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T090	6.1e-07	32.61	Pre-rRNA-processing protein TSR2 homolog OS=Bos taurus OX=9913 GN=TSR2 PE=2 SV=1	[more]
Q8C8T8	6.1e-07	34.52	Pre-rRNA-processing protein TSR2 homolog OS=Mus musculus OX=10090 GN=Tsr2 PE=1 S...	[more]
Q969E8	6.8e-06	33.73	Pre-rRNA-processing protein TSR2 homolog OS=Homo sapiens OX=9606 GN=TSR2 PE=1 SV...	[more]
Q3KRG3	1.2e-05	30.23	Pre-rRNA-processing protein TSR2 homolog OS=Danio rerio OX=7955 GN=tsr2 PE=2 SV=...	[more]
Q06672	2.6e-05	34.78	Pre-rRNA-processing protein TSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]

BLAST of Pay0002078 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3A3	1.5e-56	100.00	Pre-rRNA-processing protein TSR2-like protein isoform X2 OS=Cucumis melo var. ma...	[more]
A0A1S3AWZ6	1.5e-56	100.00	pre-rRNA-processing protein TSR2 homolog isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0L7I9	1.3e-55	98.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146640 PE=3 SV=1	[more]
A0A1S3AX32	3.7e-55	99.13	pre-rRNA-processing protein TSR2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483...	[more]
A0A6J1C959	1.6e-50	91.23	pre-rRNA-processing protein TSR2 homolog OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Pay0002078 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438674.1	3.1e-56	100.00	PREDICTED: pre-rRNA-processing protein TSR2 homolog isoform X2 [Cucumis melo] >K...	[more]
XP_004134444.1	2.6e-55	98.25	pre-rRNA-processing protein TSR2 isoform X2 [Cucumis sativus]	[more]
XP_008438673.1	7.6e-55	99.13	PREDICTED: pre-rRNA-processing protein TSR2 isoform X1 [Cucumis melo]	[more]
XP_011650975.1	6.5e-54	97.39	pre-rRNA-processing protein TSR2 isoform X1 [Cucumis sativus]	[more]
XP_038881388.1	3.5e-52	94.74	pre-rRNA-processing protein TSR2 homolog [Benincasa hispida]	[more]

BLAST of Pay0002078 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22510.1	5.1e-25	60.42	Pre-rRNA-processing protein TSR2, conserved region	[more]
AT5G27990.1	1.1e-11	41.76	Pre-rRNA-processing protein TSR2, conserved region	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019398	Pre-rRNA-processing protein TSR2	PFAM	PF10273	WGG	coord: 22..100 e-value: 1.0E-22 score: 80.5
IPR019398	Pre-rRNA-processing protein TSR2	PANTHER	PTHR21250	UNCHARACTERIZED	coord: 8..113
None	No IPR available	PANTHER	PTHR21250:SF4	PRE-RRNA-PROCESSING PROTEIN TSR2, MOTIF PROTEIN	coord: 8..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002078.1	Pay0002078.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005634	nucleus