Pay0002059 (gene) Melon (Payzawat) v1

Overview
NamePay0002059
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description30S ribosomal protein S16, chloroplastic
LocationContig00288_ERROPOS136135: 101826 .. 102927 (+)
RNA-Seq ExpressionPay0002059
SyntenyPay0002059
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAACTTCGTTTAAAACGATGTGGTAGAAAGCAACGTGCGACTTGAAGGACATGATCCACTGTGGATTCTTACACCCACCATTTTATATTATATAGGAATGAAGATGCTCTTGACTCGACATAGTTTGTTCGGTTGCACTCGAGCTCTTTTTTTTTTTTAGGGTTTTTGATGTAAATAGTACATGATGGAGCTCGAGTAGAAAGTATTGATTCATTTATCAAGGGCAGAGATCTAGGGTTAGTGTCAATCAATAAGTTAAAACTACTTCGTAAGTATAGGTTCGGTATACAAATCGAAAGGATCCAATTCGAACAAGTTTCAAATTCAAACATCAAATTGGATTAAAAGTGTATCACACGAGAATCCATTATTTATATGATTCTTTGATAAAAAGGAAATCAAAAAAAATGGTATGTTGCTACCATTTTGAAACGATTAAAGATCACCGAAGTAATGTCTAAACCCAATGATTCAAGGAAAGGATAAAGGATCCCGGAACAAGTAAAAATCTTTTTCAATTGTCTCAATAACTAAACTAGATCAGAATGAAGAATCGAAATAGATTCTAACGGAGACAGGCAAAAATAAAGAGGTTAGAGACCGCTCAATAAATGAAATGCTTAAGCTTAAGGGTTTTTTTCCTTTGCGTGAGAGTTATCCAACTTGAGTTATGGGGATAAGAATGAGTTTTTTTTTTCAAAAGAAAAACAAAAGAATAAGAAAAAAATTTTTAAATCATAGTCTAATTGATTTAATAATCTATAGATCTATTTGACATTAATTAGAATTCTATACATAACTTTGAATTTCCTCGAGCCGTACGAGGAGAAAACTTCTTATACGGTTCTGGGGGGGTACTTAAAATTTACATCTATCCCAATGAGCCGTTTATCGAATCATTGCAATTGATGTTCGATGCCGAAGAGAAGGAAGAGATCTTCGTAAAGTGGGTTTTTATGATCCGATAAAGAATCAAACCTATTTAAATGTTCCTGCTATTCTATATTTCCTTGAAAAGGGTGCTCAACCTACAGGAACTGTTCATGATATTTTAAAGAAGGCAGGTGTTTTTACGGAACTTCACCTTAATCAATAA

mRNA sequence

ATGGTAAAACTTCGTTTAAAACGATGTGGTAGAAAGCAACTGGGTTTTTATGATCCGATAAAGAATCAAACCTATTTAAATGTTCCTGCTATTCTATATTTCCTTGAAAAGGGTGCTCAACCTACAGGAACTGTTCATGATATTTTAAAGAAGGCAGGTGTTTTTACGGAACTTCACCTTAATCAATAA

Coding sequence (CDS)

ATGGTAAAACTTCGTTTAAAACGATGTGGTAGAAAGCAACTGGGTTTTTATGATCCGATAAAGAATCAAACCTATTTAAATGTTCCTGCTATTCTATATTTCCTTGAAAAGGGTGCTCAACCTACAGGAACTGTTCATGATATTTTAAAGAAGGCAGGTGTTTTTACGGAACTTCACCTTAATCAATAA

Protein sequence

MVKLRLKRCGRKQLGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILKKAGVFTELHLNQ
Homology
[Close]
BLAST of Pay0002059 vs. ExPASy Swiss-Prot
Match: Q2QDA6 (30S ribosomal protein S16, chloroplastic OS=Cucumis sativus OX=3659 GN=rps16 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.5e-26
Identity = 61/85 (71.76%), Postives = 62/85 (72.94%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ-----------------------LGFYDPIKNQTYLNVPAILYFLEK 60
          MVKLRLKRCGRKQ                       +GFYDPIKNQTYLNVPAILYFLEK
Sbjct: 1  MVKLRLKRCGRKQRAAVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEK 60

Query: 61 GAQPTGTVHDILKKAGVFTELHLNQ 63
          GAQPTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 GAQPTGTVHDILKKAGVFTELHLNQ 85

[Close]
BLAST of Pay0002059 vs. ExPASy Swiss-Prot
Match: A0ZZ17 (30S ribosomal protein S16, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps16 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 5.1e-24
Identity = 58/84 (69.05%), Postives = 59/84 (70.24%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPI NQTYLNVPAILYFLEKG
Sbjct: 1  MVKLRLKRCGRKQRAVYRIVVIDVRSRREGRDLRKVGFYDPINNQTYLNVPAILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPT TVHDILKKAGVFTEL LNQ
Sbjct: 61 AQPTATVHDILKKAGVFTELTLNQ 84

[Close]
BLAST of Pay0002059 vs. ExPASy Swiss-Prot
Match: Q2L8Y7 (30S ribosomal protein S16, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps16 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 5.1e-24
Identity = 58/84 (69.05%), Postives = 59/84 (70.24%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPI NQTYLNVPAILYFLEKG
Sbjct: 1  MVKLRLKRCGRKQRAVYRIVAIDVRSRREGRDLRKVGFYDPINNQTYLNVPAILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPT TVHDILKKAGVFTEL LNQ
Sbjct: 61 AQPTATVHDILKKAGVFTELTLNQ 84

[Close]
BLAST of Pay0002059 vs. ExPASy Swiss-Prot
Match: Q0ZJ38 (30S ribosomal protein S16, chloroplastic OS=Vitis vinifera OX=29760 GN=rps16 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.3e-23
Identity = 57/84 (67.86%), Postives = 58/84 (69.05%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPIKNQTY NVPAILYFLEKG
Sbjct: 1  MVKLRLKRCGRKQRAVYRIVAIDARSRREGRDLRKVGFYDPIKNQTYSNVPAILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPTGTVHDI KKA VFTEL LNQ
Sbjct: 61 AQPTGTVHDISKKAEVFTELRLNQ 84

[Close]
BLAST of Pay0002059 vs. ExPASy Swiss-Prot
Match: Q09X35 (30S ribosomal protein S16, chloroplastic OS=Morus indica OX=248361 GN=rps16 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.7e-23
Identity = 55/83 (66.27%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGR+Q                      +GFYDPIKNQTYLNVP ILYFLEKG
Sbjct: 1  MVKLRLKRCGRRQRAIYRIVAIDVRSRREGRALRKVGFYDPIKNQTYLNVPVILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLN 62
          AQPTGTVHDI KKAGVF EL LN
Sbjct: 61 AQPTGTVHDISKKAGVFMELRLN 83

[Close]
BLAST of Pay0002059 vs. ExPASy TrEMBL
Match: W8E1Y8 (Ribosomal protein S16 OS=Cucumis hystrix OX=396994 GN=rps16 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24
Identity = 61/82 (74.39%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ--------------------LGFYDPIKNQTYLNVPAILYFLEKGAQ 60
          MVKLRLKRCGRKQ                    +GFYDPIKNQTYLNVPAILYFLEKGAQ
Sbjct: 1  MVKLRLKRCGRKQVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQ 60

Query: 61 PTGTVHDILKKAGVFTELHLNQ 63
          PTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 PTGTVHDILKKAGVFTELHLNQ 82

[Close]
BLAST of Pay0002059 vs. ExPASy TrEMBL
Match: A0A343UM14 (30S ribosomal protein S16, chloroplastic OS=Cucumis sativus var. sativus OX=869827 GN=rps16 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24
Identity = 61/82 (74.39%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ--------------------LGFYDPIKNQTYLNVPAILYFLEKGAQ 60
          MVKLRLKRCGRKQ                    +GFYDPIKNQTYLNVPAILYFLEKGAQ
Sbjct: 1  MVKLRLKRCGRKQVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQ 60

Query: 61 PTGTVHDILKKAGVFTELHLNQ 63
          PTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 PTGTVHDILKKAGVFTELHLNQ 82

[Close]
BLAST of Pay0002059 vs. ExPASy TrEMBL
Match: A0A515BLF3 (30S ribosomal protein S16, chloroplastic OS=Siraitia grosvenorii OX=190515 GN=rps16 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24
Identity = 61/82 (74.39%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ--------------------LGFYDPIKNQTYLNVPAILYFLEKGAQ 60
          MVKLRLKRCGRKQ                    +GFYDPIKNQTYLNVPAILYFLEKGAQ
Sbjct: 1  MVKLRLKRCGRKQVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQ 60

Query: 61 PTGTVHDILKKAGVFTELHLNQ 63
          PTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 PTGTVHDILKKAGVFTELHLNQ 82

[Close]
BLAST of Pay0002059 vs. ExPASy TrEMBL
Match: A0A218KG12 (30S ribosomal protein S16, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rps16 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.0e-24
Identity = 61/84 (72.62%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPIKNQTYLNVPAILYFLEKG
Sbjct: 1  MVKLRLKRCGRKQRAVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 AQPTGTVHDILKKAGVFTELHLNQ 84

[Close]
BLAST of Pay0002059 vs. ExPASy TrEMBL
Match: A0A6H0ETM9 (30S ribosomal protein S16, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps16 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.0e-24
Identity = 61/84 (72.62%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPIKNQTYLNVPAILYFLEKG
Sbjct: 1  MVKLRLKRCGRKQRAVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 AQPTGTVHDILKKAGVFTELHLNQ 84

[Close]
BLAST of Pay0002059 vs. NCBI nr
Match: YP_009004027.1 (ribosomal protein S16 [Cucumis hystrix] >AHJ61369.1 ribosomal protein S16 [Cucumis hystrix] >AVE15313.1 ribosomal protein S16 [Cucumis sativus var. sativus] >QDK99929.1 ribosomal protein S16 [Siraitia grosvenorii])

HSP 1 Score: 119.8 bits (299), Expect = 8.4e-24
Identity = 61/82 (74.39%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ--------------------LGFYDPIKNQTYLNVPAILYFLEKGAQ 60
          MVKLRLKRCGRKQ                    +GFYDPIKNQTYLNVPAILYFLEKGAQ
Sbjct: 1  MVKLRLKRCGRKQVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQ 60

Query: 61 PTGTVHDILKKAGVFTELHLNQ 63
          PTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 PTGTVHDILKKAGVFTELHLNQ 82

[Close]
BLAST of Pay0002059 vs. NCBI nr
Match: YP_009752648.1 (ribosomal protein S16 [Ampelosycios humblotii] >QIT05129.1 ribosomal protein S16 [Ampelosycios humblotii])

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 61/84 (72.62%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPIKNQTYLNVPAILYFLEKG
Sbjct: 1  MVKLRLKRCGRKQRAVYRIIAIDVRSRREGKDLRKVGFYDPIKNQTYLNVPAILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 AQPTGTVHDILKKAGVFTELHLNQ 84

[Close]
BLAST of Pay0002059 vs. NCBI nr
Match: YP_009674373.1 (ribosomal protein S16 [Siraitia grosvenorii] >YP_009751804.1 ribosomal protein S16 [Indofevillea khasiana] >YP_009752141.1 ribosomal protein S16 [Linnaeosicyos amara] >YP_009752225.1 ribosomal protein S16 [Trichosanthes baviensis] >YP_009752309.1 ribosomal protein S16 [Bryonia marmorata] >YP_009752563.1 ribosomal protein S16 [Trichosanthes homophylla] >YP_009752817.1 ribosomal protein S16 [Baijiania yunnanensis] >YP_009753156.1 ribosomal protein S16 [Trichosanthes truncata] >YP_009753240.1 ribosomal protein S16 [Nothoalsomitra suberosa] >YP_009753771.1 ribosomal protein S16 [Trichosanthes pilosa] >YP_010119716.1 ribosomal protein S16 [Hemsleya zhejiangensis] >YP_247581.1 ribosomal protein S16 [Cucumis sativus] >AHM88696.1 ribosomal protein S16 [Lagenaria siceraria] >ALF03283.1 ribosomal protein S16 [Cucumis sativus var. hardwickii] >QIT04032.1 ribosomal protein S16 [Luffa aegyptiaca] >QIT05044.1 ribosomal protein S16 [Trichosanthes kirilowii] >QJD26627.1 ribosomal protein S16 [Trichosanthes rosthornii] >QSQ72292.1 ribosomal protein S16 [Benincasa hispida] >QZL38575.1 ribosomal protein S16 [Citrullus naudinianus] >QZL38663.1 ribosomal protein S16 [Citrullus ecirrhosus])

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 61/84 (72.62%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPIKNQTYLNVPAILYFLEKG
Sbjct: 1  MVKLRLKRCGRKQRAVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKG 60

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPTGTVHDILKKAGVFTELHLNQ
Sbjct: 61 AQPTGTVHDILKKAGVFTELHLNQ 84

[Close]
BLAST of Pay0002059 vs. NCBI nr
Match: YP_010131076.1 (ribosomal protein S16 [Benincasa hispida] >QPZ75723.1 ribosomal protein S16 [Benincasa hispida])

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 61/84 (72.62%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPIKNQTYLNVPAILYFLEKG
Sbjct: 14 MVKLRLKRCGRKQRAVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKG 73

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPTGTVHDILKKAGVFTELHLNQ
Sbjct: 74 AQPTGTVHDILKKAGVFTELHLNQ 97

[Close]
BLAST of Pay0002059 vs. NCBI nr
Match: QJS52337.1 (ribosomal protein S16 [Indofevillea khasiana])

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 61/84 (72.62%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 60
          MVKLRLKRCGRKQ                      +GFYDPIKNQTYLNVPAILYFLEKG
Sbjct: 14 MVKLRLKRCGRKQRAVYRIIAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKG 73

Query: 61 AQPTGTVHDILKKAGVFTELHLNQ 63
          AQPTGTVHDILKKAGVFTELHLNQ
Sbjct: 74 AQPTGTVHDILKKAGVFTELHLNQ 97

[Close]
BLAST of Pay0002059 vs. TAIR 10
Match: ATCG00050.1 (ribosomal protein S16 )

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-18
Identity = 46/79 (58.23%), Postives = 51/79 (64.56%), Query Frame = 0 

Query: 1  MVKLRLKRCGRKQ----------------------LGFYDPIKNQTYLNVPAILYFLEKG 58
          MVKLRLKRCGRKQ                      +GFYDPI NQT+LN+ AIL FL+KG
Sbjct: 1  MVKLRLKRCGRKQRAVYRILAIDVRYRREGRDLSKVGFYDPITNQTFLNLSAILDFLKKG 60

[Close]
BLAST of Pay0002059 vs. TAIR 10
Match: AT4G34620.1 (small subunit ribosomal protein 16 )

HSP 1 Score: 40.0 bits (92), Expect = 7.9e-04
Identity = 20/46 (43.48%), Postives = 28/46 (60.87%), Query Frame = 0 

Query: 14 LGFYDPIK-----NQTYLNVPAILYFLEKGAQPTGTVHDILKKAGV 55
          LGFYDP++     ++  L    I Y+L  GAQPT TV  +L +AG+
Sbjct: 37 LGFYDPLQGKEDADRVSLKFDRIKYWLSVGAQPTDTVESMLFRAGL 82

The following BLAST results are available for this feature:
BLAST of Pay0002059 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2QDA62.5e-2671.7630S ribosomal protein S16, chloroplastic OS=Cucumis sativus OX=3659 GN=rps16 PE=... [more]
A0ZZ175.1e-2469.0530S ribosomal protein S16, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps1... [more]
Q2L8Y75.1e-2469.0530S ribosomal protein S16, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps16 ... [more]
Q0ZJ383.3e-2367.8630S ribosomal protein S16, chloroplastic OS=Vitis vinifera OX=29760 GN=rps16 PE=... [more]
Q09X359.7e-2366.2730S ribosomal protein S16, chloroplastic OS=Morus indica OX=248361 GN=rps16 PE=3... [more]
BLAST of Pay0002059 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
W8E1Y84.1e-2474.39Ribosomal protein S16 OS=Cucumis hystrix OX=396994 GN=rps16 PE=3 SV=1[more]
A0A343UM144.1e-2474.3930S ribosomal protein S16, chloroplastic OS=Cucumis sativus var. sativus OX=8698... [more]
A0A515BLF34.1e-2474.3930S ribosomal protein S16, chloroplastic OS=Siraitia grosvenorii OX=190515 GN=rp... [more]
A0A218KG127.0e-2472.6230S ribosomal protein S16, chloroplastic OS=Cucumis sativus var. hardwickii OX=3... [more]
A0A6H0ETM97.0e-2472.6230S ribosomal protein S16, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=r... [more]
BLAST of Pay0002059 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009004027.18.4e-2474.39ribosomal protein S16 [Cucumis hystrix] >AHJ61369.1 ribosomal protein S16 [Cucum... [more]
YP_009752648.11.4e-2372.62ribosomal protein S16 [Ampelosycios humblotii] >QIT05129.1 ribosomal protein S16... [more]
YP_009674373.11.4e-2372.62ribosomal protein S16 [Siraitia grosvenorii] >YP_009751804.1 ribosomal protein S... [more]
YP_010131076.11.4e-2372.62ribosomal protein S16 [Benincasa hispida] >QPZ75723.1 ribosomal protein S16 [Ben... [more]
QJS52337.11.4e-2372.62ribosomal protein S16 [Indofevillea khasiana][more]
BLAST of Pay0002059 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00050.14.3e-1858.23ribosomal protein S16 [more]
AT4G34620.17.9e-0443.48small subunit ribosomal protein 16 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 11..62
e-value: 2.7E-15
score: 57.7
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 1..59
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 13..55
e-value: 2.9E-13
score: 47.6
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 13..42
e-value: 5.5E-6
score: 26.3
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 13..57
NoneNo IPR availablePANTHERPTHR12919:SF3830S RIBOSOMAL PROTEIN S16, CHLOROPLASTICcoord: 13..57
IPR020592Ribosomal protein S16, conserved sitePROSITEPS00732RIBOSOMAL_S16coord: 2..11

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0002059.1Pay0002059.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009536 plastid
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome