Pay0001898 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001898
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Splicing factor YJU2
Location	chr10: 24767151 .. 24772029 (+)
RNA-Seq Expression	Pay0001898
Synteny	Pay0001898

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGGTTCGTATGATGCTTCCTATGAGCATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACAAAGTTCAATTCTCGCAAGGAGGACGTCATTGGTGAGGCAAGGGAATCCCTTTTATATATTTTTTATATTTTTAACCTAAAAGATGTTTATTCCTTTTGTAATTGATTTTCTGATTTCTCATGTATTTTTTTCCTTTTATTTCAGACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTACGTTGTAGAATCAGGAGCCACACGTAATTTCGAACCATGGCGTGAGGAAGATGAAGCTTCTGAGAAGGAGAAACACAAAAGGAATGCGGAAGAGATGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCCAAACGGGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGGTTTTTGTTTTATTACCCTTTGTTTTGTTACTAAGATTCTTGGGTTGTGATTGCTTTCTTGGAGTTGTGGCTTTGAACAAGATTCTAATTTGTTTCTTGATTTTAACATATTCAATTATAAAGTATAGTTTATTTTTTAAAATAACTTGGTGGGTGTTTGTTCTGCAGTCGAGACACGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACGAACTGCTGCTGAAAAGGTATGTATAGCACTGCCTTCATGAAAACAGTTTGACATGAAATGTATGTGATAAAATATTGAAAACAGAAGCCTTGATTCTGTCTTTTAATTTCGAGCATCATCTTAACTATTTTAACATATTGAGCAATATACACTTTGCAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATGTGAGTTCATTTTTCCTATATGTTTTTCATCTTCCATTGAAACCATTTACAGTTGTTTCTTTTTGTTTCCTTGGAATTAAAATTTTTCATATGCTTTTGTCAATACCCTTCTGCAGAACTCAAACAGTTATGTTAGAAGAATTTCAGATGATGAATTTGATGATGGTAGTCATTCTGTTCAGCATTTGACCAACAATGATATAGCATCGGACTTTAAAGCAAAGGTAATAAAGTAATAAATGAAGTTCTTTCCTATTCCTTATATGAAGGTTTGGATGAATAGTGAACATTAGAGGTGTGAGACATTTGTAAACCGGATAGGGTCTTTGAGAATCTCAACTATTTAGCTTATTCTTAACTCCTCGACATGTTAACTATTTCTGCAGTTTTTAATCAAAGGTAAATCTGGTGATTAGGATTAATTTTCAGGGTTGTCAAAACTCAAAAGTAATTTAAATATGCATAAAGATACTATTTGTGCCAACTAAACGTCATTGGAGCATTCAAACATGCATATGCCTTCTAGAAAAATGCATTTGCCTTTTCTCATAGGCATTTCTATCTAATTGTGAATCTTTAAGTGAAGTATATAACAAAATTGCTACTTGTTTCTTTTTTTGTTTGCTAGCATGAACTTCATTTTAGTGTATATCTTAATTTGCGGAGGATAAGGACTAAAAAGTGGAGTATGTTTGAGACTTGTCCCTGCTATTGAATTTTAAAGTATTTGTATTATTTCTTTGCATAGAAGATTGCTATTTAAACCTATTTGTAGCATTCAAATTTGAATGTGCCTTTTCTCATTAGCATTTCAATCCATTTGGATTGCAGAAGCTAAGGGTTTCTGAAGGATCTCCTCATGATCCTACCAGTACTTCAACAAAAGCTGATTTTCTCCATAGCCGCATGGGTGAAGGTACCCTACCTTTATACTTTTCTAAGGAATATATTGGGAAAATGGTGTGAATGTTACAATATATACCAATCTTTAATTGATTTGTCCCTTCTCTCAATATTGCGAGAAAAAGTTTTTGGTAGAAGCTAGTGCTGGGTATAAAAGGATCTTCTTTATTCTTTTCTCTCTTCATGAAAAGGTTACAGTTAATAGGAAGGCCTTTCCAATTCAAAAGTGGGAAAATGGTAAAAGAATAGTTAGTAAGGAACTTTTCAACGAGCGTTCTTATAGTTCCTTTGGGAGGGGATTCTCTCTACCTCTTATCCCAACCCCTAGGCTGTTTGTTCTCTCCTTTTTTAATCCTTTCATGTTTCTTATAAGGAAGATTGTTGCTGAGGAATGAGGGGTTCTCATGGGGAGGAAAATCAAGATGATTTTGGTTTGCAGGTGTGGAATTTCAAGTTGGTAGCACTTAGTTTAAGGTAGGAAATTAGAGTTTACAAGGGATTGGGATACGATCTCAGATGCGTCTTTTTCCTCTAAACAAGTCAGTTTATATCTGTGCTTTTCTTTCTCAAAACGACCCCATCTTGAAGGGAGGTGAAACAAAGGCATATGGTGAAACTCTTGAAAGGCATCACAAAGATTCACCTTTTATCTTCTCCTTTCTTCTTGTGTTCTGTGGGGATGGGAAGGAAACAGTTTTCGGGAGGATAAGTGGATTAGGGATAACCCTATTAACTGCTCTCTTTTTCCATGTTTTTACCTTTCATCCTCAATGAGGAATCAATCATTTGTTGCTATCTTTCCCCATTCTTTGGATTTTATTGTAGTTTGTCCGATAAGGAAATGGCAAATATTATTGCTATTCTTTCCTTGAATTGGGAAGTCTCGTTGTAATCCAGATGTTTGTGGTTGGAGTTTGCTCAATTGATGGTTTTTTGTGCAACTCCTCTTTTCTTGGCAGTCCTCCGTGTGAGTTCTGGGTTTTTGCCTTGTTGCAGAAGTGAAAAATTATCAAGAAGGCTAAGATTTTTTACTTGATATGTTATCCACATAATAGTTCACAAGTTGGATTGGGTGTTGAGCAAAGTGCCCAATTTGTCTGGTTTGTGGTCTTACGTTGTTTGTAGGAGGGAGGCAAAAGATCTTATTCATATATTTTGGAGCTGTGATCTTGCTTATTTGGTTTGCAGTTGGTCTTTGAGGAGTTTGGCTTCATTTTGGCTAGATTTCGTGAGAAAGGTTGTTTCTTGTGGCAAGTCATGTTGTGTGCTCTTTTGTGGAACCTTTGGGTCGAGAGGAACAGTAGAGTTTTTAGAGGGGTTGAGAATTCTTCGAGTGGTCTTTTTCCCGTATTGAATTTAATGCTTTGTCGTGGGCTTTTGGTCGAATCTCCTTCTTGTGGGTCTTCCTCGTTGTTTACCTGTGTATTCTTTCAAACTCTTTTCTATGAAAACTTCTTTATTCATGAATCTATCTATATATCTATATCTATACTATATATAAAAGAGACTAGGATGAGAGTCTTTACATCCCTGCTTTGCTTGTACAATTCTTCATAATTCGTATGTCTTGCGTCACAATGATTTGAGTCGAGGTGGTTACATGTGAAATGGTGTATTCTTTTATGTATCAGTATGATCTAGATCATTTTTTTTCTTTAAAGGGGACGAAGCTTCTTTATTAATAAGGACTCAAAGTATAATCGAGGGAGTCGTAGGGGGATTGGGAGGCGCACCCAGACATCTCAACTAGGTTGACACCCCCTTAGCGCCAAGCATCATATCCCAAAAAAACATAAAGGCAAAAAACCAATGGAGGAACAATAATAATAACTTCCAGCCTATTACAAGGGTCCAGAAAAATAGGAAAAACGTGACCAGAAAAAACAGAAAAGGACCCAATAAAACAATCTAAAAATTAAAAACTGACAAAAGGCCGATCCTTCAAAACTTCGAGGCTTCAGACTGTGAAATCTGCAATGCAGTGGATCTGGTGCAGCAACGGTTAGTCTTGATTGAGAAAAACATTCCAGTTGAGGTAAATATCTTGAATGGAATAATTAACGAACTCCTTTTTTAAGAAACAATATCATAAATATGGAACATTACGATTTAAAGTAGAGACATTTTGGAATGGACATAAAATATATTATTACTTATTAGTTATAATCTTTTAAATTTTTTTCTCCATGCACTAAAAATAAACTATAAATGTCATATGCATCACTTGTGTTATGGACTAGTATATATATGTGCTAAGGTAAAGATATTTATTTTTATAATATTTTTGTAGTTATTGTGTCAAGAAAAATAATAAAAAATCTCTTCTAATCCCATTTCTCTCTCCTATTGGTCCTCAACCCACGCTCACCTCTATGAGATTCCTAGTTATAGAATAAAGGAGTACGGCGAATATTAATATGGTTTTAGTTGGGGGCATTTTAGTAAATAGTTTGTTAGGTCTTTTTGCTACGTATAGTAGGAGAGGGGTGGGGAAAGGTGTGAAGAATTTTGTCAAGGTTTTTCTAATGGGGGAATTTGGAAGAGGATTCTCCGCCCTGTTGAATATTTGAGATATATTGTCATTTCTTCTCGATATTGTGTTAGGATCCCACCTAACAAGAATTATCTCAAGAACAAAAGGAGGAACTCAAGAACAGTTAAAGAACAATCAAATGTGAAAATATATGAAATATATGCTGGAATACCACAAGAACAAGTAACAAGCAACCCCTGGCCTTTTGAGAGGGCTGGACTCTCCCCAATTTCCCAATCAAGTAAATCCCACTACAAAATTCTTCATATCCTTCCCTATTCTCATCTCTTTCTGTTTATAGCAAACATAGCCTAACCATCTTACTAACTAATTACTAATATGCCTCTCTTGAGAGCCATACCATTACTCTACTAATAATCCACTATTTTCCTATCTAGGGGTTTTGCAATAGTCCACCCTTC

mRNA sequence

ATGGGTGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGGTTCGTATGATGCTTCCTATGAGCATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACAAAGTTCAATTCTCGCAAGGAGGACGTCATTGGTGAGGCAAGGGAATCCCTTTTATATATTTTTTATATTTTTAACCTAAAAGATACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTACGTTGTAGAATCAGGAGCCACACGTAATTTCGAACCATGGCAAACACAAAAGGAATGCGGAAGAGATGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCCAAACGGGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCGAGACACGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACGAACTGCTGCTGAAAAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATAACTCAAACAGTTATGTTAGAAGAATTTCAGATGATGAATTTGATGATGGTAGTCATTCTGTTCAGCATTTGACCAACAATGATATAGCATCGGACTTTAAAGCAAAGAAGCTAAGGGTTTCTGAAGGATCTCCTCATGATCCTACCAGTACTTCAACAAAAGCTGATTTTCTCCATAGCCGCATGGGTGAAGGATCCCACCTAACAAGAATTATCTCAAGAACAAAAGGAGGAACTCAAGAACAGTTAAAGAACAATCAAATGTGAAAATATATGAAATATATGCTGGAATACCACAAGAACAAGTAACAAGCAACCCCTGGCCTTTTGAGAGGGCTGGACTCTCCCCAATTTCCCAATCAAGGGTTTTGCAATAGTCCACCCTTC

Coding sequence (CDS)

ATGGGTGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGGTTCGTATGATGCTTCCTATGAGCATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACAAAGTTCAATTCTCGCAAGGAGGACGTCATTGGTGAGGCAAGGGAATCCCTTTTATATATTTTTTATATTTTTAACCTAAAAGATACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTACGTTGTAGAATCAGGAGCCACACGTAATTTCGAACCATGGCAAACACAAAAGGAATGCGGAAGAGATGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCCAAACGGGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCGAGACACGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACGAACTGCTGCTGAAAAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATAACTCAAACAGTTATGTTAGAAGAATTTCAGATGATGAATTTGATGATGGTAGTCATTCTGTTCAGCATTTGACCAACAATGATATAGCATCGGACTTTAAAGCAAAGAAGCTAAGGGTTTCTGAAGGATCTCCTCATGATCCTACCAGTACTTCAACAAAAGCTGATTTTCTCCATAGCCGCATGGGTGAAGGATCCCACCTAACAAGAATTATCTCAAGAACAAAAGGAGGAACTCAAGAACAGTTAAAGAACAATCAAATGTGA

Protein sequence

MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWQTQKECGRDGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQHLTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEGSHLTRIISRTKGGTQEQLKNNQM

Homology

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BLAST of Pay0001898 vs. ExPASy Swiss-Prot
Match: Q54WR5 (Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-52
Identity = 114/251 (45.42%), Postives = 163/251 (64.94%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKV++KYYPPDFDPSK+ +++  +    KV  MLPMSIRCNTCG YI +GTKFN++K
Sbjct: 1   MGERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           E V  E                 YLGI+I+RF+ +C +C+AELTIKTDP+NS+YV ESGA
Sbjct: 61  ETVQNE----------------DYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGA 120

Query: 121 TRNFEPW---------QTQKECGRDGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHA 180
           TRN+EPW         +  KE   + D M +LENRTL+SKREM++L AL+E+KS+ SR++
Sbjct: 121 TRNYEPWKETDEEKSNRMTKEQEEEQDAMIALENRTLESKREMEMLDALEEIKSLNSRNS 180

Query: 181 TVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDG---SHSV 240
            +  + +L    +    +EK  +EED+ L+KSI  N +   + +I+D+   +    S+ +
Sbjct: 181 EIDTEQLLEYNLQKQELEEKLQDEEDDLLVKSIFNNKNKLELNQINDNNSINNNIDSNKI 235

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BLAST of Pay0001898 vs. ExPASy Swiss-Prot
Match: A8WHR3 (Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.0e-50
Identity = 108/247 (43.72%), Postives = 150/247 (60.73%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           E V  E                 YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GA
Sbjct: 61  ETVQNE----------------LYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGA 120

Query: 121 TRNFE----------PWQTQKECGRDGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNF+            Q ++E     +PMK LENRT DSK EM++L  L E+K +  R 
Sbjct: 121 TRNFQAEKLIEEEEKKIQQEREDEELNNPMKVLENRTRDSKLEMEVLENLQELKELNQRQ 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 238
           A V  + ML   +     ++++ +EEDE   K ++     + V+R+ D + ++ + + + 
Sbjct: 181 AQVDFEGMLGQYKELEQRQKQREQEEDEQETKEML---ERALVKRLRDSDSEEEAENAKE 228

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BLAST of Pay0001898 vs. ExPASy Swiss-Prot
Match: Q9D6J3 (Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.6e-49
Identity = 108/233 (46.35%), Postives = 145/233 (62.23%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           E V  EA                YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GA
Sbjct: 61  ETVQNEA----------------YLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGA 120

Query: 121 TRNFEP----------WQTQKECGRDGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNF+            Q ++E     +PMK LENRT DSK EM++L  L E+K +  R 
Sbjct: 121 TRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQ 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD 224
           A V  ++ML   + +  + +++ EEEDE    +++      + R + D E +D
Sbjct: 181 AHVDFEAMLRQHRMSQEQWQQQQEEEDERETAALL--EEARHRRLLEDSESED 215

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BLAST of Pay0001898 vs. ExPASy Swiss-Prot
Match: Q9BW85 (Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.4e-49
Identity = 103/208 (49.52%), Postives = 134/208 (64.42%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           E V  E                 YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GA
Sbjct: 61  ETVQNE----------------VYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGA 120

Query: 121 TRNFEP----------WQTQKECGRDGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNF+            Q ++E     +PMK LENRT DSK EM++L  L E+K +  R 
Sbjct: 121 TRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQ 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDE 199
           A V  ++ML   + +  E+ ++ +EEDE
Sbjct: 181 AHVDFEAMLRQHRLSEEERRRQQQEEDE 192

[Close]

BLAST of Pay0001898 vs. ExPASy Swiss-Prot
Match: Q9P7C5 (Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf16 PE=1 SV=2)

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-40
Identity = 96/242 (39.67%), Postives = 136/242 (56.20%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QMKVRMMLPMSIRCNTCGNYIYKGTK 60
           M ERKVLNKY PPD+DPS  P  ++ K Q     ++ VR+M P S+RC+TCG YIYKG K
Sbjct: 1   MSERKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKK 60

Query: 61  FNSRKEDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYV 120
           FN+RKE                    + Y  I I RFY +CTRC+AE+T  TDP+++DY 
Sbjct: 61  FNARKE-----------------KTGEKYFSIDILRFYIRCTRCAAEITFITDPKHADYA 120

Query: 121 VESGATRNFEPWQ------------TQKECGRDGDPMKSLENRTLDSKREMDILAALDEM 180
            ESGA+RN+EPW              ++    + D M+ LE +TLD+KR+M I  ALDE+
Sbjct: 121 AESGASRNYEPWHEKRLQEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQISDALDEL 180

Query: 181 KSMKSRHATVSIDSMLVALQRTA--------AEKEKKLEEEDEALIKSIVFNNSNSYVRR 218
           +   +R + V+ID  +  L+  A        ++K K  EEE +   KS+  +     +RR
Sbjct: 181 REKSARRSRVNIDDAIALLKEDAYGSIEEEESKKRKFEEEEIDREAKSLFSSQDGEIIRR 225

[Close]

BLAST of Pay0001898 vs. ExPASy TrEMBL
Match: A0A0A0KL62 (Splicing factor YJU2 OS=Cucumis sativus OX=3659 GN=Csa_5G003615 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 7.4e-124
Identity = 241/281 (85.77%), Postives = 244/281 (86.83%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA
Sbjct: 61  EDVIGE----------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GD MKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWREEDEASEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS  VQH
Sbjct: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGE 272
           LTNNDIASDFKAKK RVSEGSPHDPTSTS+KA FLHSRMGE
Sbjct: 241 LTNNDIASDFKAKKQRVSEGSPHDPTSTSSKAGFLHSRMGE 264

[Close]

BLAST of Pay0001898 vs. ExPASy TrEMBL
Match: A0A6J1HNB0 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.3e-116
Identity = 223/283 (78.80%), Postives = 236/283 (83.39%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGA
Sbjct: 61  EDVIGE----------------TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSMLVALQ+TAAEKEKKLEEEDEALIKSIVFNNSN+YVRRISDDEFDD +H VQH
Sbjct: 181 ATVSIDSMLVALQQTAAEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEGS 274
            T+ND   DF+AKK ++SE  PHDPT+TSTKA  LH+  GEGS
Sbjct: 241 STSNDETFDFRAKKQKISEEFPHDPTNTSTKAAVLHALKGEGS 267

[Close]

BLAST of Pay0001898 vs. ExPASy TrEMBL
Match: A0A6J1E6Q8 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 8.2e-115
Identity = 221/283 (78.09%), Postives = 234/283 (82.69%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGA
Sbjct: 61  EDVIGE----------------TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSML ALQ+TAAEKEKKLEEEDEALIKSIVFN SN+YVRRISDDEFDD +H VQH
Sbjct: 181 ATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEGS 274
            TNND   DF+AKK ++SE  PHDPT+TSTKA  L++  GEGS
Sbjct: 241 STNNDETFDFRAKKQKISEEFPHDPTNTSTKAAVLNALTGEGS 267

[Close]

BLAST of Pay0001898 vs. ExPASy TrEMBL
Match: A0A6J1E3A4 (Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 5.0e-112
Identity = 223/283 (78.80%), Postives = 231/283 (81.63%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+KVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA
Sbjct: 61  EDVIGE----------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWREEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSML+ALQ+TAAEKEKKLEEEDEALIKSIVFNNS  YVRRI DDEFDDGSH V  
Sbjct: 181 ATVSIDSMLMALQQTAAEKEKKLEEEDEALIKSIVFNNSKDYVRRIPDDEFDDGSHFV-- 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEGS 274
            TNND  S   AKK +V E SPHDPTSTSTKA  L+S   EG+
Sbjct: 241 -TNNDKTSGTSAKKQKVLEESPHDPTSTSTKAVILNSLTDEGN 264

[Close]

BLAST of Pay0001898 vs. ExPASy TrEMBL
Match: A0A5A7SUI1 (Splicing factor YJU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00300 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.6e-110
Identity = 221/282 (78.37%), Postives = 223/282 (79.08%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVI                                           DPQNSDYVVESGA
Sbjct: 61  EDVI-------------------------------------------DPQNSDYVVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWREEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH
Sbjct: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 239

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEG 273
           LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEG
Sbjct: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEG 239

[Close]

BLAST of Pay0001898 vs. NCBI nr
Match: XP_004149128.1 (splicing factor YJU2 [Cucumis sativus] >KGN50783.2 hypothetical protein Csa_018408 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 3.1e-124
Identity = 242/282 (85.82%), Postives = 245/282 (86.88%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA
Sbjct: 61  EDVIGE----------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GD MKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWREEDEASEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS  VQH
Sbjct: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEG 273
           LTNNDIASDFKAKK RVSEGSPHDPTSTS+KA FLHSRMGEG
Sbjct: 241 LTNNDIASDFKAKKQRVSEGSPHDPTSTSSKAGFLHSRMGEG 265

[Close]

BLAST of Pay0001898 vs. NCBI nr
Match: XP_031745804.1 (LOW QUALITY PROTEIN: splicing factor YJU2-like [Cucumis sativus])

HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-123
Identity = 241/282 (85.46%), Postives = 244/282 (86.52%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQIFRFYFKCTRCSAEL IKTDPQNSDYVVESGA
Sbjct: 61  EDVIGE----------------TYLGIQIFRFYFKCTRCSAELXIKTDPQNSDYVVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GD MKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWREEDEASEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS  VQH
Sbjct: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEG 273
           LTNNDIASDFKAKK RVSEGSPHDPTSTS+KA FLHSRMGEG
Sbjct: 241 LTNNDIASDFKAKKQRVSEGSPHDPTSTSSKAGFLHSRMGEG 265

[Close]

BLAST of Pay0001898 vs. NCBI nr
Match: XP_038895471.1 (splicing factor YJU2 [Benincasa hispida] >XP_038895472.1 splicing factor YJU2 [Benincasa hispida])

HSP 1 Score: 429.9 bits (1104), Expect = 1.8e-116
Identity = 228/282 (80.85%), Postives = 236/282 (83.69%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA
Sbjct: 61  EDVIGE----------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWREEDEAFEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           A VSIDSML+ALQRT AEKEKKLEEEDEALIKSIVFNNSN++VRRISD+EFDD SH VQH
Sbjct: 181 ANVSIDSMLMALQRTTAEKEKKLEEEDEALIKSIVFNNSNNFVRRISDEEFDDSSHFVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEG 273
           LTNN   SDFKAKK +VSE SPHDPTSTS KA  L+S  GEG
Sbjct: 241 LTNNVKTSDFKAKKQKVSEESPHDPTSTSEKAVVLNSLTGEG 266

[Close]

BLAST of Pay0001898 vs. NCBI nr
Match: XP_022965295.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita maxima] >XP_022965296.1 coiled-coil domain-containing protein 94 homolog [Cucurbita maxima])

HSP 1 Score: 427.9 bits (1099), Expect = 6.9e-116
Identity = 223/283 (78.80%), Postives = 236/283 (83.39%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGA
Sbjct: 61  EDVIGE----------------TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSMLVALQ+TAAEKEKKLEEEDEALIKSIVFNNSN+YVRRISDDEFDD +H VQH
Sbjct: 181 ATVSIDSMLVALQQTAAEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEGS 274
            T+ND   DF+AKK ++SE  PHDPT+TSTKA  LH+  GEGS
Sbjct: 241 STSNDETFDFRAKKQKISEEFPHDPTNTSTKAAVLHALKGEGS 267

[Close]

BLAST of Pay0001898 vs. NCBI nr
Match: KAG6577830.1 (Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.4 bits (1095), Expect = 2.0e-115
Identity = 222/283 (78.45%), Postives = 235/283 (83.04%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGA
Sbjct: 61  EDVIGE----------------TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGA 120

Query: 121 TRNFEPWQTQKECGRD----------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           TRNFEPW+ + E              GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH
Sbjct: 121 TRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHSVQH 240
           ATVSIDSML+ALQ+TAAEKEKKLEEEDEALIKSIVFN SN+YVRRISDDEFDD +H VQH
Sbjct: 181 ATVSIDSMLMALQQTAAEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQH 240

Query: 241 LTNNDIASDFKAKKLRVSEGSPHDPTSTSTKADFLHSRMGEGS 274
            TNND   DF+AKK ++SE  PHDPT+TSTKA  LH+  GEGS
Sbjct: 241 STNNDETFDFRAKKQKISEEFPHDPTNTSTKAAVLHALTGEGS 267

[Close]

BLAST of Pay0001898 vs. TAIR 10
Match: AT1G17130.2 (Family of unknown function (DUF572) )

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-89
Identity = 179/279 (64.16%), Postives = 212/279 (75.99%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+KVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE         + F+++ TYLGIQIFRFYFKCT+CSAELT+KTDPQNSDY+VESGA
Sbjct: 61  EDVIGEN--------FSFDVQ-TYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGA 120

Query: 121 TRNFEPWQTQ-KECGRD---------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           +RN+EPW+ + +E  +D         GD MKSLENRTLDSKREMDI+AALDEMKSMKSRH
Sbjct: 121 SRNYEPWRAEDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD------- 240
           ATVS+D+ML ALQRT AEK K++EEEDEA+IKSI F      +RRI+D+E DD       
Sbjct: 181 ATVSVDAMLEALQRTGAEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDI 240

Query: 241 GSHSVQHLTNNDIASDFKAKKLRVSEGSPHDPTSTSTKA 263
             +          +SD  +KK + +E SP +PT   T +
Sbjct: 241 DDYPSLQKEKKGSSSDL-SKKRKATEVSPSNPTDILTSS 268

[Close]

BLAST of Pay0001898 vs. TAIR 10
Match: AT1G17130.1 (Family of unknown function (DUF572) )

HSP 1 Score: 325.5 bits (833), Expect = 4.5e-89
Identity = 178/279 (63.80%), Postives = 207/279 (74.19%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+KVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVIGE                TYLGIQIFRFYFKCT+CSAELT+KTDPQNSDY+VESGA
Sbjct: 61  EDVIGE----------------TYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGA 120

Query: 121 TRNFEPWQTQ-KECGRD---------GDPMKSLENRTLDSKREMDILAALDEMKSMKSRH 180
           +RN+EPW+ + +E  +D         GD MKSLENRTLDSKREMDI+AALDEMKSMKSRH
Sbjct: 121 SRNYEPWRAEDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRH 180

Query: 181 ATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD------- 240
           ATVS+D+ML ALQRT AEK K++EEEDEA+IKSI F      +RRI+D+E DD       
Sbjct: 181 ATVSVDAMLEALQRTGAEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDI 240

Query: 241 GSHSVQHLTNNDIASDFKAKKLRVSEGSPHDPTSTSTKA 263
             +          +SD  +KK + +E SP +PT   T +
Sbjct: 241 DDYPSLQKEKKGSSSDL-SKKRKATEVSPSNPTDILTSS 261

[Close]

BLAST of Pay0001898 vs. TAIR 10
Match: AT2G32050.1 (Family of unknown function (DUF572) )

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-62
Identity = 124/223 (55.61%), Postives = 158/223 (70.85%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPP+FDP ++PR+R+PKNQQ K+R M+P+ IRCNTCGNY+ +GTK N R+
Sbjct: 1   MGERKGLNKYYPPNFDPKQIPRIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTKINCRE 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           E+VIGE                TYLGI+I RFYFKC++C  EL +KTDP+NS YV ESGA
Sbjct: 61  ENVIGE----------------TYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGA 120

Query: 121 TRNFEPWQTQKECGRDGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLV 180
           T  ++  + +++    GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML 
Sbjct: 121 TCVYDQHEEEEQAEDGGDRMSSLEKRTLVSKREVDVMAALDEMKSMKSRRVSVSVDSMLE 180

Query: 181 ALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD 224
            L +   E+E+  +EED ALIKS  F       RRI D+E D+
Sbjct: 181 DLSKRHKEEEEVAKEEDAALIKSTKFGKQ----RRIVDEETDE 203

[Close]

BLAST of Pay0001898 vs. TAIR 10
Match: AT3G43250.1 (Family of unknown function (DUF572) )

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-55
Identity = 118/223 (52.91%), Postives = 155/223 (69.51%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPPDFDP K+ R+++PKNQQ K+R MLP+ +RCNTCGNY+ +GTKFN R+
Sbjct: 1   MGERKNLNKYYPPDFDPKKIHRIKKPKNQQKKIRFMLPVRVRCNTCGNYMSEGTKFNCRQ 60

Query: 61  EDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA 120
           EDVI E                TYLG++I RFY KCT+C AELTIKTDP+N  Y VESGA
Sbjct: 61  EDVITE----------------TYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGA 120

Query: 121 T---RNFEPWQTQKECGRDGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDS 180
           +      E  + +K+  +  + ++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D 
Sbjct: 121 SCLYNGHEDIEEEKK-KKHENALESLENRTVVSKREIEVMASLDELKSMKSRRASLSVDY 180

Query: 181 MLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDE 221
           ML  L R   ++E+ +EE  E LIKSI F       +RI  DE
Sbjct: 181 MLEDLSRRKKQEEENVEE--ELLIKSIKFG------KRIRTDE 198

[Close]

BLAST of Pay0001898 vs. TAIR 10
Match: AT2G29430.1 (Family of unknown function (DUF572) )

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-18
Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 35  MMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGEARESLLYIFYIFNLKDTYLGIQIFRFYF 94
           + LPM ++CN C N + KGTKF SR EDVIGE                TYLGI+IFRF  
Sbjct: 8   LSLPMRLQCNNCDNIMSKGTKFTSRVEDVIGE----------------TYLGIKIFRFQI 67

Query: 95  KCTRCSAELTIKTDPQNSDYVVESGATRNFEP 127
           +CT  S E+  +TDP+N+D+++ESGATR   P
Sbjct: 68  QCTNGSHEMKFRTDPKNADFIIESGATRLLLP 83

The following BLAST results are available for this feature:

BLAST of Pay0001898 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54WR5	2.5e-52	45.42	Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1	[more]
A8WHR3	4.0e-50	43.72	Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1	[more]
Q9D6J3	2.6e-49	46.35	Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1	[more]
Q9BW85	3.4e-49	49.52	Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1	[more]
Q9P7C5	1.7e-40	39.67	Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]

BLAST of Pay0001898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL62	7.4e-124	85.77	Splicing factor YJU2 OS=Cucumis sativus OX=3659 GN=Csa_5G003615 PE=3 SV=1	[more]
A0A6J1HNB0	3.3e-116	78.80	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1	[more]
A0A6J1E6Q8	8.2e-115	78.09	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1	[more]
A0A6J1E3A4	5.0e-112	78.80	Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1	[more]
A0A5A7SUI1	1.6e-110	78.37	Splicing factor YJU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G...	[more]

BLAST of Pay0001898 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149128.1	3.1e-124	85.82	splicing factor YJU2 [Cucumis sativus] >KGN50783.2 hypothetical protein Csa_0184...	[more]
XP_031745804.1	1.5e-123	85.46	LOW QUALITY PROTEIN: splicing factor YJU2-like [Cucumis sativus]	[more]
XP_038895471.1	1.8e-116	80.85	splicing factor YJU2 [Benincasa hispida] >XP_038895472.1 splicing factor YJU2 [B...	[more]
XP_022965295.1	6.9e-116	78.80	coiled-coil domain-containing protein 94 homolog [Cucurbita maxima] >XP_02296529...	[more]
KAG6577830.1	2.0e-115	78.45	Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Pay0001898 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17130.2	2.0e-89	64.16	Family of unknown function (DUF572)	[more]
AT1G17130.1	4.5e-89	63.80	Family of unknown function (DUF572)	[more]
AT2G32050.1	1.6e-62	55.61	Family of unknown function (DUF572)	[more]
AT3G43250.1	1.5e-55	52.91	Family of unknown function (DUF572)	[more]
AT2G29430.1	1.4e-18	48.91	Family of unknown function (DUF572)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 179..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..265
None	No IPR available	PANTHER	PTHR12111:SF7	BNAA02G14200D PROTEIN	coord: 1..261
IPR007590	Saf4/Yju2 protein	PFAM	PF04502	DUF572	coord: 9..272 e-value: 3.5E-76 score: 256.9
IPR007590	Saf4/Yju2 protein	PANTHER	PTHR12111	SPLICING FACTOR YJU2	coord: 1..261
IPR043701	Splicing factor Yju2	HAMAP	MF_03226	YJU2	coord: 1..273 score: 22.333393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001898.1	Pay0001898.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000349	generation of catalytic spliceosome for first transesterification step
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0046872	metal ion binding