Pay0001847 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001847
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag/pol protein
Location	chr11: 26082700 .. 26084847 (-)
RNA-Seq Expression	Pay0001847
Synteny	Pay0001847

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

mRNA sequence

ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTATTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTATTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Protein sequence

MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLLVPHQGLMKPPHQVNLILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

Homology

[Close]

BLAST of Pay0001847 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.6e-117
Identity = 254/735 (34.56%), Postives = 381/735 (51.84%), Query Frame = 0


Query: 2    VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP- 61
            VRSM+  A+LP SFWG AV+TA +++N  PS  ++ E P  +W  ++ S SH +++GC  
Sbjct: 596  VRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRA 655

Query: 62   -AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE--------- 121
             AHV      KL+ +S  C F+GY  E  G   +DP + +V  S +  F E         
Sbjct: 656  FAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADM 715

Query: 122  EDHMRNHKPRSKLLVP-------------------------------------------- 181
             + ++N    + + +P                                            
Sbjct: 716  SEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPT 775

Query: 182  -----HQGLMKPPH---------QVNLILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLE 241
                 HQ L +                +L++ D   +P S K+ ++  +K+Q +KAM  E
Sbjct: 776  QGEEQHQPLRRSERPRVESRRYPSTEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEE 835

Query: 242  MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG----- 301
            MES+  N  ++LV+LP+G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G     
Sbjct: 836  MESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDE 895

Query: 302  -------------------------------TAFLNGNLEESIFMSQPEGFITQGQEQKV 361
                                           TAFL+G+LEE I+M QPEGF   G++  V
Sbjct: 896  IFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMV 955

Query: 362  CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVDDIL 421
            CKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L
Sbjct: 956  CKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDML 1015

Query: 422  LIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRY 481
            ++G D G +  +K  L+  F MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R+
Sbjct: 1016 IVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERF 1075

Query: 482  SMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAV 541
            +M+N+K    P    + LSK+  P T +E  +M ++PY+SAVGSLMYAM+CTRPDI +AV
Sbjct: 1076 NMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAV 1135

Query: 542  GIVSRYQSNPG----------------------------------------------KST 584
            G+VSR+  NPG                                              KS+
Sbjct: 1136 GVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSS 1195

[Close]

BLAST of Pay0001847 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-70
Identity = 215/819 (26.25%), Postives = 341/819 (41.64%), Query Frame = 0


Query: 3    RSMMSYAQLPSSFWGYAVETAVHILNNVPSKSV---SETPFELWRGRKPSLSHFRIWGCP 62
            R+M+S A+L  SFWG AV TA +++N +PS+++   S+TP+E+W  +KP L H R++G  
Sbjct: 597  RTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGAT 656

Query: 63   AHVLVTNPK-KLEPRSRLCQFVGYPKETRGGLFFD------------------------- 122
             +V + N + K + +S    FVGY  E  G   +D                         
Sbjct: 657  VYVHIKNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAV 716

Query: 123  ------------------PQENRVFVST----------NATFL---EEDHMRNHKPRSKL 182
                              P ++R  + T          N  FL   +E   +N    S+ 
Sbjct: 717  KFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRK 776

Query: 183  LV----PHQG-------LMKPPHQVNLILLN----------------------------- 242
            ++    P++         +K   + N   LN                             
Sbjct: 777  IIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETA 836

Query: 243  -------------HDGVE------------DPLSYKQ--------------AMNDV---- 302
                         +DG+E              +SY +                NDV    
Sbjct: 837  EHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSF 896

Query: 303  -------DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTF 362
                   DK  W +A++ E+ +   N+ W +   PE    +  +W++  K +  G    +
Sbjct: 897  DEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRY 956

Query: 363  KARLVAKGYTQR------------------------------------EGTAFLNGNLEE 422
            KARLVA+G+TQ+                                      TAFLNG L+E
Sbjct: 957  KARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKE 1016

Query: 423  SIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY- 482
             I+M  P+G         VCKLN++IYGLKQA+R W   F+ A+K   F  +  + C+Y 
Sbjct: 1017 EIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYI 1076

Query: 483  -KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDR 542
              K N  +  +++LYVDD+++   D+  + + K +L  +F+M DL E ++ +GI+I  + 
Sbjct: 1077 LDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EM 1136

Query: 543  KNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYAS 584
            +   + LSQ+ Y+ K+L +++M+N      P    ++     S       ++    P  S
Sbjct: 1137 QEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS-------DEDCNTPCRS 1196

[Close]

BLAST of Pay0001847 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.4e-57
Identity = 155/520 (29.81%), Postives = 229/520 (44.04%), Query Frame = 0


Query: 148  DPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSA 207
            +P +  QAM D   D+W +AM  E+ +   N  W+LV   P  V  +GC+WI+ +K +S 
Sbjct: 938  EPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 997

Query: 208  GKVQTFKARLVAKGYTQREG------------------------------------TAFL 267
            G +  +KARLVAKGY QR G                                     AFL
Sbjct: 998  GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1057

Query: 268  NGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVD 327
             G L + ++MSQP GF+ + +   VC+L ++IYGLKQA R+W +   T + + GF  ++ 
Sbjct: 1058 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1117

Query: 328  EPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQI 387
            +  ++       + ++++YVDDIL+ GND   L      L+ +F +K+  +  Y LGI+ 
Sbjct: 1118 DTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE- 1177

Query: 388  IRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRI 447
               R  + L LSQ  Y   LL R +M  +K    P      L+     K P   E     
Sbjct: 1178 -AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE----- 1237

Query: 448  PYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGK------------------------ 507
             Y   VGSL Y +  TRPD+ YAV  +S+Y   P                          
Sbjct: 1238 -YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1297

Query: 508  -----------------------STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAAC 567
                                   ST+G +  L    + W S KQ  +  S+ EAEY +  
Sbjct: 1298 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1357

Query: 568  EAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE 584
              + E  W+   L +L +   ++ P  +YCDN GA      P  H R KHI   YH IR 
Sbjct: 1358 NTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1417

[Close]

BLAST of Pay0001847 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.0e-57
Identity = 161/540 (29.81%), Postives = 237/540 (43.89%), Query Frame = 0


Query: 128  GLMKPPHQVNLILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLP 187
            G++KP  + +L  ++     +P +  QA+ D   ++W  AM  E+ +   N  W+LV  P
Sbjct: 936  GIIKPNPKYSL-AVSLAAESEPRTAIQALKD---ERWRNAMGSEINAQIGNHTWDLVPPP 995

Query: 188  EG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG-------------------- 247
               V  +GC+WI+ +K +S G +  +KARLVAKGY QR G                    
Sbjct: 996  PSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1055

Query: 248  ----------------TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 307
                             AFL G L + ++MSQP GFI + +   VCKL +++YGLKQA R
Sbjct: 1056 GVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1115

Query: 308  SWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWL 367
            +W +     + + GF  +V +  ++       + ++++YVDDIL+ GND   L +    L
Sbjct: 1116 AWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNL 1175

Query: 368  AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGV 427
            + +F +KD  E  Y LGI+    R    L LSQ  YI  LL R +M  +K    P     
Sbjct: 1176 SQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSP 1235

Query: 428  HLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGK---- 487
             LS     K     E      Y   VGSL Y +  TRPDI YAV  +S++   P +    
Sbjct: 1236 KLSLYSGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQ 1295

Query: 488  -------------------------------------------STSGSVFTLNGGAVVWR 547
                                                       ST+G +  L    + W 
Sbjct: 1296 ALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWS 1355

Query: 548  SIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSK 584
            S KQ  +  S+ EAEY +    + E  W+   L +L +   +  P  +YCDN GA     
Sbjct: 1356 SKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCA 1415

[Close]

BLAST of Pay0001847 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-23
Identity = 88/310 (28.39%), Postives = 125/310 (40.32%), Query Frame = 0


Query: 227 TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 286
           TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K  GF 
Sbjct: 5   TAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFC 64

Query: 287 QNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL 346
           ++  E  +Y +       ++ +YVDD+L+          VK  L   + MKDLG+    L
Sbjct: 65  RHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFL 124

Query: 347 GIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVED 406
           G+  I    N  + LS   YI K      +   K    P  +   L +  SP     ++D
Sbjct: 125 GLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP----HLKD 184

Query: 407 MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP---------------------- 466
           +   PY S VG L++     RPDI Y V ++SR+   P                      
Sbjct: 185 I--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMC 244

Query: 467 -------------------------GKSTSGSVFTLNGGAVVWRSIK-QGCIADSTMEAE 489
                                      ST G V  L G  V W S K +G I   + EAE
Sbjct: 245 LKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 304

[Close]

BLAST of Pay0001847 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 572/715 (80.00%), Postives = 578/715 (80.84%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLLV------------------------------PHQGLMKPPHQVNL------------ 180
            KL++                              P Q L  P     +            
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  --ILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 240
              +++  DGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  WIYKRKRDSAGKVQTFKARLVAKGYTQREG------------------------------ 300
            WIYKRKRDSAGKVQTFKARLVAKGYTQREG                              
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 820

Query: 301  ------TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
                  TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 480
            EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

Query: 481  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG--------------- 540
            PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG               
Sbjct: 1001 PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLR 1060

Query: 541  -------------------------------KSTSGSVFTLNGGAVVWRSIKQGCIADST 590
                                           KSTSGSVFTLNGGAVVWRSIKQGCIADST
Sbjct: 1061 RTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADST 1120

[Close]

BLAST of Pay0001847 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 572/715 (80.00%), Postives = 578/715 (80.84%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 395  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 455  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514

Query: 121  KLLV------------------------------PHQGLMKPPHQVNL------------ 180
            KL++                              P Q L  P     +            
Sbjct: 515  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 574

Query: 181  --ILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 240
              +++  DGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK
Sbjct: 575  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 634

Query: 241  WIYKRKRDSAGKVQTFKARLVAKGYTQREG------------------------------ 300
            WIYKRKRDSAGKVQTFKARLVAKGYTQREG                              
Sbjct: 635  WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 694

Query: 301  ------TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
                  TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 695  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 754

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 755  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 814

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 480
            EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 815  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 874

Query: 481  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG--------------- 540
            PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG               
Sbjct: 875  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLR 934

Query: 541  -------------------------------KSTSGSVFTLNGGAVVWRSIKQGCIADST 590
                                           KSTSGSVFTLNGGAVVWRSIKQGCIADST
Sbjct: 935  RTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADST 994

[Close]

BLAST of Pay0001847 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 566/715 (79.16%), Postives = 576/715 (80.56%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLLV------------------------------PHQGLMKPPHQVNL------------ 180
            KL++                              P Q L  P     +            
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  --ILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 240
              +++  DGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  WIYKRKRDSAGKVQTFKARLVAKGYTQREG------------------------------ 300
            WIYKRKRDSAGKVQTFKARLVAKGYT++EG                              
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEI 820

Query: 301  ------TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
                  TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 480
            E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

Query: 481  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG--------------- 540
            PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG               
Sbjct: 1001 PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLR 1060

Query: 541  -------------------------------KSTSGSVFTLNGGAVVWRSIKQGCIADST 590
                                           KSTS SVFTLNGGAVVWRSIKQGCIADST
Sbjct: 1061 RTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADST 1120

[Close]

BLAST of Pay0001847 vs. ExPASy TrEMBL
Match: A0A5D3BH07 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00240 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 1.0e-278
Identity = 495/590 (83.90%), Postives = 510/590 (86.44%), Query Frame = 0


Query: 20  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQF 79
           VET VHILNNVPS SVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLE RSRLCQF
Sbjct: 247 VETTVHILNNVPSNSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLESRSRLCQF 306

Query: 80  VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLLVPHQ--------GLMK 139
           VGYPKETRGGLFFDPQ NRVFVSTNATFLEEDHMR+HKPRSKL++             + 
Sbjct: 307 VGYPKETRGGLFFDPQVNRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVDEVG 366

Query: 140 PPHQVNLILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 199
           P  +VN    + DGVED L Y+QA NDVDKDQWVKAMDLEMESMYFNS+WELVDLPEGVK
Sbjct: 367 PSSRVNETTTSDDGVEDSLFYEQATNDVDKDQWVKAMDLEMESMYFNSMWELVDLPEGVK 426

Query: 200 PIGCKWIYKRKRDSAGK-VQTFKARLVAKGY---TQREGTAFLNGNLEESIFMSQPEGFI 259
           PIGCKWIYKRKRDSAGK ++   +  +   Y         A+LN N EESIFMSQPEGFI
Sbjct: 427 PIGCKWIYKRKRDSAGKSIRILLSIAIFYDYEIWQMDVKIAYLNDNHEESIFMSQPEGFI 486

Query: 260 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLV 319
           TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS  FDQNVDEP VYKKINK KVAFLV
Sbjct: 487 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSNSFDQNVDEPYVYKKINKEKVAFLV 546

Query: 320 LYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYI 379
           LYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL LSQATYI
Sbjct: 547 LYVDDILLIGNDVAYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLVLSQATYI 606

Query: 380 DKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTR 439
           DK+LVRYSMQNSK  LLPFRHGVHLSKEQ PKTPQEVEDMRRI Y SAVGSLMY MLCT+
Sbjct: 607 DKMLVRYSMQNSKNDLLPFRHGVHLSKEQCPKTPQEVEDMRRIFYVSAVGSLMYVMLCTK 666

Query: 440 PDICYAVGIVSRYQSNPG--------KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 499
            DI  AVGIVSRYQSNPG        KSTSGSVFTLNGGAV W SIKQGCIADSTMEA Y
Sbjct: 667 SDIYNAVGIVSRYQSNPGLDHWTDSRKSTSGSVFTLNGGAVEWCSIKQGCIADSTMEAGY 726

Query: 500 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 559
           V ACEAAKE VWLRKFLHDLEVVPNMNLPITLYCDNSG V NSKEPRSHKRGKHIERKYH
Sbjct: 727 VTACEAAKEVVWLRKFLHDLEVVPNMNLPITLYCDNSGTVVNSKEPRSHKRGKHIERKYH 786

Query: 560 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 590
           LIREIVQR DVIVTKIASEHNIAD FTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 787 LIREIVQRRDVIVTKIASEHNIADLFTKTLTAKVFEGHLESLGLRDMYIR 836

[Close]

BLAST of Pay0001847 vs. ExPASy TrEMBL
Match: A0A5A7U951 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00570 PE=4 SV=1)

HSP 1 Score: 967.2 bits (2499), Expect = 3.0e-278
Identity = 495/594 (83.33%), Postives = 510/594 (85.86%), Query Frame = 0


Query: 20  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQF 79
           VET VHILNNVPS SVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLE RSRLCQF
Sbjct: 247 VETTVHILNNVPSNSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLESRSRLCQF 306

Query: 80  VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLLVPHQ--------GLMK 139
           VGYPKETRGGLFFDPQ NRVFVSTNATFLEEDHMR+HKPRSKL++             + 
Sbjct: 307 VGYPKETRGGLFFDPQVNRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVDEVG 366

Query: 140 PPHQVNLILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 199
           P  +VN    + DGVED L Y+QA NDVDKDQWVKAMDLEMESMYFNS+WELVDLPEGVK
Sbjct: 367 PSSRVNETTTSDDGVEDSLFYEQATNDVDKDQWVKAMDLEMESMYFNSMWELVDLPEGVK 426

Query: 200 PIGCKWIYKRKRDSAGK-VQTFKARLVAKGY---TQREGTAFLNGNLEESIFMSQPEGFI 259
           PIGCKWIYKRKRDSAGK ++   +  +   Y         A+LN N EESIFMSQPEGFI
Sbjct: 427 PIGCKWIYKRKRDSAGKSIRILLSIAIFYDYEIWQMDVKIAYLNDNHEESIFMSQPEGFI 486

Query: 260 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLV 319
           TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS  FDQNVDEP VYKKINK KVAFLV
Sbjct: 487 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSNSFDQNVDEPYVYKKINKEKVAFLV 546

Query: 320 LYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYI 379
           LYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL LSQATYI
Sbjct: 547 LYVDDILLIGNDVAYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLVLSQATYI 606

Query: 380 DKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTR 439
           DK+LVRYSMQNSK  LLPFRHGVHLSKEQ PKTPQEVEDMRRI Y SAVGSLMY MLCT+
Sbjct: 607 DKMLVRYSMQNSKNDLLPFRHGVHLSKEQCPKTPQEVEDMRRIFYVSAVGSLMYVMLCTK 666

Query: 440 PDICYAVGIVSRYQSNPG------------KSTSGSVFTLNGGAVVWRSIKQGCIADSTM 499
            DI  AVGIVSRYQSNPG            KSTSGSVFTLNGGAV W SIKQGCIADSTM
Sbjct: 667 SDIYNAVGIVSRYQSNPGLDHWTVVKIILKKSTSGSVFTLNGGAVEWCSIKQGCIADSTM 726

Query: 500 EAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIE 559
           EA YV ACEAAKE VWLRKFLHDLEVVPNMNLPITLYCDNSG V NSKEPRSHKRGKHIE
Sbjct: 727 EAGYVTACEAAKEVVWLRKFLHDLEVVPNMNLPITLYCDNSGTVVNSKEPRSHKRGKHIE 786

Query: 560 RKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 590
           RKYHLIREIVQR DVIVTKIASEHNIAD FTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 787 RKYHLIREIVQRRDVIVTKIASEHNIADLFTKTLTAKVFEGHLESLGLRDMYIR 840

[Close]

BLAST of Pay0001847 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 572/715 (80.00%), Postives = 578/715 (80.84%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLLV------------------------------PHQGLMKPPHQVNL------------ 180
            KL++                              P Q L  P     +            
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  --ILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 240
              +++  DGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  WIYKRKRDSAGKVQTFKARLVAKGYTQREG------------------------------ 300
            WIYKRKRDSAGKVQTFKARLVAKGYTQREG                              
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 820

Query: 301  ------TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
                  TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 480
            EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

Query: 481  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG--------------- 540
            PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG               
Sbjct: 1001 PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLR 1060

Query: 541  -------------------------------KSTSGSVFTLNGGAVVWRSIKQGCIADST 590
                                           KSTSGSVFTLNGGAVVWRSIKQGCIADST
Sbjct: 1061 RTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADST 1120

[Close]

BLAST of Pay0001847 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 572/715 (80.00%), Postives = 578/715 (80.84%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 395  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 455  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514

Query: 121  KLLV------------------------------PHQGLMKPPHQVNL------------ 180
            KL++                              P Q L  P     +            
Sbjct: 515  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 574

Query: 181  --ILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 240
              +++  DGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK
Sbjct: 575  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 634

Query: 241  WIYKRKRDSAGKVQTFKARLVAKGYTQREG------------------------------ 300
            WIYKRKRDSAGKVQTFKARLVAKGYTQREG                              
Sbjct: 635  WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 694

Query: 301  ------TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
                  TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 695  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 754

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 755  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 814

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 480
            EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 815  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 874

Query: 481  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG--------------- 540
            PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG               
Sbjct: 875  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLR 934

Query: 541  -------------------------------KSTSGSVFTLNGGAVVWRSIKQGCIADST 590
                                           KSTSGSVFTLNGGAVVWRSIKQGCIADST
Sbjct: 935  RTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADST 994

[Close]

BLAST of Pay0001847 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 566/715 (79.16%), Postives = 576/715 (80.56%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLLV------------------------------PHQGLMKPPHQVNL------------ 180
            KL++                              P Q L  P     +            
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  --ILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 240
              +++  DGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  WIYKRKRDSAGKVQTFKARLVAKGYTQREG------------------------------ 300
            WIYKRKRDSAGKVQTFKARLVAKGYT++EG                              
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEI 820

Query: 301  ------TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
                  TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 480
            E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

Query: 481  PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG--------------- 540
            PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG               
Sbjct: 1001 PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLR 1060

Query: 541  -------------------------------KSTSGSVFTLNGGAVVWRSIKQGCIADST 590
                                           KSTS SVFTLNGGAVVWRSIKQGCIADST
Sbjct: 1061 RTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADST 1120

[Close]

BLAST of Pay0001847 vs. NCBI nr
Match: TYJ97931.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 968.8 bits (2503), Expect = 2.2e-278
Identity = 495/590 (83.90%), Postives = 510/590 (86.44%), Query Frame = 0


Query: 20  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQF 79
           VET VHILNNVPS SVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLE RSRLCQF
Sbjct: 247 VETTVHILNNVPSNSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLESRSRLCQF 306

Query: 80  VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLLVPHQ--------GLMK 139
           VGYPKETRGGLFFDPQ NRVFVSTNATFLEEDHMR+HKPRSKL++             + 
Sbjct: 307 VGYPKETRGGLFFDPQVNRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVDEVG 366

Query: 140 PPHQVNLILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 199
           P  +VN    + DGVED L Y+QA NDVDKDQWVKAMDLEMESMYFNS+WELVDLPEGVK
Sbjct: 367 PSSRVNETTTSDDGVEDSLFYEQATNDVDKDQWVKAMDLEMESMYFNSMWELVDLPEGVK 426

Query: 200 PIGCKWIYKRKRDSAGK-VQTFKARLVAKGY---TQREGTAFLNGNLEESIFMSQPEGFI 259
           PIGCKWIYKRKRDSAGK ++   +  +   Y         A+LN N EESIFMSQPEGFI
Sbjct: 427 PIGCKWIYKRKRDSAGKSIRILLSIAIFYDYEIWQMDVKIAYLNDNHEESIFMSQPEGFI 486

Query: 260 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLV 319
           TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS  FDQNVDEP VYKKINK KVAFLV
Sbjct: 487 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSNSFDQNVDEPYVYKKINKEKVAFLV 546

Query: 320 LYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYI 379
           LYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL LSQATYI
Sbjct: 547 LYVDDILLIGNDVAYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLVLSQATYI 606

Query: 380 DKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTR 439
           DK+LVRYSMQNSK  LLPFRHGVHLSKEQ PKTPQEVEDMRRI Y SAVGSLMY MLCT+
Sbjct: 607 DKMLVRYSMQNSKNDLLPFRHGVHLSKEQCPKTPQEVEDMRRIFYVSAVGSLMYVMLCTK 666

Query: 440 PDICYAVGIVSRYQSNPG--------KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 499
            DI  AVGIVSRYQSNPG        KSTSGSVFTLNGGAV W SIKQGCIADSTMEA Y
Sbjct: 667 SDIYNAVGIVSRYQSNPGLDHWTDSRKSTSGSVFTLNGGAVEWCSIKQGCIADSTMEAGY 726

Query: 500 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 559
           V ACEAAKE VWLRKFLHDLEVVPNMNLPITLYCDNSG V NSKEPRSHKRGKHIERKYH
Sbjct: 727 VTACEAAKEVVWLRKFLHDLEVVPNMNLPITLYCDNSGTVVNSKEPRSHKRGKHIERKYH 786

Query: 560 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 590
           LIREIVQR DVIVTKIASEHNIAD FTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 787 LIREIVQRRDVIVTKIASEHNIADLFTKTLTAKVFEGHLESLGLRDMYIR 836

[Close]

BLAST of Pay0001847 vs. NCBI nr
Match: KAA0051680.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 967.2 bits (2499), Expect = 6.3e-278
Identity = 495/594 (83.33%), Postives = 510/594 (85.86%), Query Frame = 0


Query: 20  VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQF 79
           VET VHILNNVPS SVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLE RSRLCQF
Sbjct: 247 VETTVHILNNVPSNSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLESRSRLCQF 306

Query: 80  VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLLVPHQ--------GLMK 139
           VGYPKETRGGLFFDPQ NRVFVSTNATFLEEDHMR+HKPRSKL++             + 
Sbjct: 307 VGYPKETRGGLFFDPQVNRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVDEVG 366

Query: 140 PPHQVNLILLNHDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 199
           P  +VN    + DGVED L Y+QA NDVDKDQWVKAMDLEMESMYFNS+WELVDLPEGVK
Sbjct: 367 PSSRVNETTTSDDGVEDSLFYEQATNDVDKDQWVKAMDLEMESMYFNSMWELVDLPEGVK 426

Query: 200 PIGCKWIYKRKRDSAGK-VQTFKARLVAKGY---TQREGTAFLNGNLEESIFMSQPEGFI 259
           PIGCKWIYKRKRDSAGK ++   +  +   Y         A+LN N EESIFMSQPEGFI
Sbjct: 427 PIGCKWIYKRKRDSAGKSIRILLSIAIFYDYEIWQMDVKIAYLNDNHEESIFMSQPEGFI 486

Query: 260 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLV 319
           TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS  FDQNVDEP VYKKINK KVAFLV
Sbjct: 487 TQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSNSFDQNVDEPYVYKKINKEKVAFLV 546

Query: 320 LYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYI 379
           LYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL LSQATYI
Sbjct: 547 LYVDDILLIGNDVAYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLVLSQATYI 606

Query: 380 DKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTR 439
           DK+LVRYSMQNSK  LLPFRHGVHLSKEQ PKTPQEVEDMRRI Y SAVGSLMY MLCT+
Sbjct: 607 DKMLVRYSMQNSKNDLLPFRHGVHLSKEQCPKTPQEVEDMRRIFYVSAVGSLMYVMLCTK 666

Query: 440 PDICYAVGIVSRYQSNPG------------KSTSGSVFTLNGGAVVWRSIKQGCIADSTM 499
            DI  AVGIVSRYQSNPG            KSTSGSVFTLNGGAV W SIKQGCIADSTM
Sbjct: 667 SDIYNAVGIVSRYQSNPGLDHWTVVKIILKKSTSGSVFTLNGGAVEWCSIKQGCIADSTM 726

Query: 500 EAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIE 559
           EA YV ACEAAKE VWLRKFLHDLEVVPNMNLPITLYCDNSG V NSKEPRSHKRGKHIE
Sbjct: 727 EAGYVTACEAAKEVVWLRKFLHDLEVVPNMNLPITLYCDNSGTVVNSKEPRSHKRGKHIE 786

Query: 560 RKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 590
           RKYHLIREIVQR DVIVTKIASEHNIAD FTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 787 RKYHLIREIVQRRDVIVTKIASEHNIADLFTKTLTAKVFEGHLESLGLRDMYIR 840

[Close]

BLAST of Pay0001847 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-53
Identity = 145/484 (29.96%), Postives = 220/484 (45.45%), Query Frame = 0


Query: 147 EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSA 206
           ++P +Y +A   +    W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 207 GKVQTFKARLVAKGYTQREG------------------------------------TAFL 266
           G ++ +KARLVAKGYTQ+EG                                     AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 267 NGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 326
           NG+L+E I+M  P G+   QG       VC L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 327 QNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL 386
           Q+  +   + KI       +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 387 GIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVED 446
           G++I R      + + Q  Y   LL    +   K   +P    V  S         +  D
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVD 383

Query: 447 MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP---------------------- 506
            +   Y   +G LMY  + TR DI +AV  +S++   P                      
Sbjct: 384 AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 507 -------------------------GKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 544
                                     +ST+G    L    + W+S KQ  ++ S+ EAEY
Sbjct: 444 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

[Close]

BLAST of Pay0001847 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-11
Identity = 68/234 (29.06%), Postives = 91/234 (38.89%), Query Frame = 0


Query: 305 FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA 364
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 365 TYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAML 424
            Y +++L    M + K    P    + L+   S     +  D R     S VG+L Y  L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFR-----SIVGALQYLTL 121

Query: 425 CTRPDICYAVGIVSRYQSNP---------------------------------------- 484
            TRPDI YAV IV +    P                                        
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 181

Query: 485 -------GKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 492
                   +ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Pay0001847 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 63.9 bits (154), Expect = 4.9e-10
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 164 WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQ 223
           W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

Query: 224 REGTAFL 231
            EG  F+
Sbjct: 100 EEGIYFV 106

[Close]

BLAST of Pay0001847 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-07
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 2  VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPA 61
          VRSM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ R +GC A
Sbjct: 9  VRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRFGCVA 68

Query: 62 HVLVTNPKKLEPRSR 76
          ++   +  KL+PR++
Sbjct: 69 YI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of Pay0001847 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.6e-117	34.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.1e-70	26.25	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.4e-57	29.81	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.0e-57	29.81	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	2.2e-23	28.39	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Pay0001847 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	0.0e+00	80.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	0.0e+00	80.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	0.0e+00	79.16	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5D3BH07	1.0e-278	83.90	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G0024...	[more]
A0A5A7U951	3.0e-278	83.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00570...	[more]

BLAST of Pay0001847 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	0.0e+00	80.00	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	0.0e+00	80.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	0.0e+00	79.16	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ97931.1	2.2e-278	83.90	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0051680.1	6.3e-278	83.33	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0001847 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.7e-53	29.96	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.2e-11	29.06	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	4.9e-10	43.28	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	1.7e-07	38.67	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 178..226 e-value: 1.2E-12 score: 48.0 coord: 227..385 e-value: 1.2E-39 score: 136.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..55 e-value: 1.1E-6 score: 30.1
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 227..448 coord: 2..113 coord: 148..227
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 429..572 e-value: 3.83228E-59 score: 191.913
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 178..539
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001847.1	Pay0001847.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding