Pay0001806 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001806
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Cytochrome b6-f complex subunit 7
Location	chr01: 145439 .. 147441 (-)
RNA-Seq Expression	Pay0001806
Synteny	Pay0001806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAATACTATATATCATCATTTTTATTTTTATTTTCATGGCTAGTATCCAATGATTTGAGAAATCTTTAGCAATTCTAATCTGTTTATGAACCACCCAAATTCCTCTTACCTTATCCATTCCCCCCTTCTTCTTTCTCCATACAAACACTCTTTTTTCCTCATCCAATTCTCATCTCATCACCTTCCACTTTCTCTTCCACTCAGGTTCAATCCCTTCCCTTTTTTCCCTCAAAATCCCTTTCCCCATCTGGCTTTTCACTCAATATTGACTCTTCCTTCTCTTCCTCTTCTTTCAGGCATCATTCCAATGGCTACTGCCTCCGCTACCCTCTCGACGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGTCCATTATATTACTGGGCTTAACTCCTTTGGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTTATTGGAGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGAAAAGCTACCAAAAATGGTTGATGATGATGAGGATATTGGTCAGTTATCTGAAATTTGTAAGTTAATCTGTTACTTTTACCAGTTATTGTAGAACTCAATTGTTTCCATCAGTCAAAACAATTGACAAAATTCATTTTGCCTATTTCTATCCCTGCTTTCTCATTACAAAATAATGGCATTGTAGTATATTGTTCATCTGCTTGAAAAAAAATGCATATTCTTGTAAATTCTTTTTGTGCTGTTTGGATCATGAGAAGAATAAGAAATGAACTTTGCAGGCAATTATTGTAAGATCAACTACTTCTTTGCGGAGACTGTCAAAAAAAAAAAAAAAACAATAAAAGTATGGTTATCAAACGGAGTTTAAGTTATTGTGTTTTTGAATTCACTGTTAATATGTTTTGAAACGACAATTTTGTCTTAAGTAAACTGAAATAAAAAGGGAACAAGTTCAAAGAAAATGTGTCCACATACAATCCATTTCACGCTGTTACCGTTTTGGTAGTAGAAAGTTGGATTGTAAACAATCTCCTAAACCAAGCAACCAGCAGCTCAAATTGGTGTAAAGAACTTGGGTGTTAGTTAGTAGGTTGTTGAATGAAGATTGGTATGAAAATTAGACAGGAGACTGAAACCAAGAACTGTACTTTTGTGTATAGAATTCAATTTCACTGGAGCAAGCCTTCATGTTTACTCTCAAATAAAGGTTGTCTTGTTGATTATACAAAGCCTAGCGTACATGCAACAGATTCTTGCAATATATGGCTTGAAATTGATACTTGATGAACTTATTACTAAGAAGTAAGAGTAAGAAACATTTTGAATTGACTTAGCTTGACTCAGGGAAAGAGATGAGGGGATTAGATAAAAATAAGCTTCATCCCAGTTAATAGGCATGTATCAACAAAAAGAGAGTTCCTTGATCGTACTGTAAAATGCTAGAATGTCAAATTGTCAAACAATACAGGGGACGGAAGTTAGGACATTAAAGAGAAGGATCCTCTCTCCATAAGCGATTCTAATTAAATTGGATGATCTCGATAGCACACGCATTTCCAGGGTTGGATGCTGAATGTTCCTAAAAATGTTGGTGGATAATTATCAGGAATAACACTCAAAGTTTGTCAACCACAGCCACTCCAATAGGAACCACTTCCACAATTCTTTGGACTACAAGATCATGTAAGACTGCCATCATCATCAATCAATAGCTCTCTTTTTTGTCAACTGTTTTAATGATTGTTCCGTTCAGGAAGGAGACCAAAACTAGCTGTTATTCCATTCATCTTCCTTAGATTTTATTAATCTTTCCCAA

mRNA sequence

AACAAATACTATATATCATCATTTTTATTTTTATTTTCATGGCTAGTATCCAATGATTTGAGAAATCTTTAGCAATTCTAATCTGTTTATGAACCACCCAAATTCCTCTTACCTTATCCATTCCCCCCTTCTTCTTTCTCCATACAAACACTCTTTTTTCCTCATCCAATTCTCATCTCATCACCTTCCACTTTCTCTTCCACTCAGGCATCATTCCAATGGCTACTGCCTCCGCTACCCTCTCGACGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGTCCATTATATTACTGGGCTTAACTCCTTTGGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTTATTGGAGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGAAAAGCTACCAAAAATGGTTGATGATGATGAGGATATTGGTCAGTTATCTGAAATTTGTAAGTTAATCTGTTACTTTTACCAGTTATTGTAGAACTCAATTGTTTCCATCAGTCAAAACAATTGACAAAATTCATTTTGCCTATTTCTATCCCTGCTTTCTCATTACAAAATAATGGCATTGTAGTATATTGTTCATCTGCTTGAAAAAAAATGCATATTCTTGTAAATTCTTTTTGTGCTGTTTGGATCATGAGAAGAATAAGAAATGAACTTTGCAGGCAATTATTGTAAGATCAACTACTTCTTTGCGGAGACTGTCAAAAAAAAAAAAAAAACAATAAAAGTATGGTTATCAAACGGAGTTTAAGTTATTGTGTTTTTGAATTCACTGTTAATATGTTTTGAAACGACAATTTTGTCTTAAGTAAACTGAAATAAAAAGGGAACAAGTTCAAAGAAAATGTGTCCACATACAATCCATTTCACGCTGTTACCGTTTTGGTAGTAGAAAGTTGGATTGTAAACAATCTCCTAAACCAAGCAACCAGCAGCTCAAATTGGTGTAAAGAACTTGGGTGTTAGTTAGTAGGTTGTTGAATGAAGATTGGTATGAAAATTAGACAGGAGACTGAAACCAAGAACTGTACTTTTGTGTATAGAATTCAATTTCACTGGAGCAAGCCTTCATGTTTACTCTCAAATAAAGGTTGTCTTGTTGATTATACAAAGCCTAGCGTACATGCAACAGATTCTTGCAATATATGGCTTGAAATTGATACTTGATGAACTTATTACTAAGAAGTAAGAGTAAGAAACATTTTGAATTGACTTAGCTTGACTCAGGGAAAGAGATGAGGGGATTAGATAAAAATAAGCTTCATCCCAGTTAATAGGCATGTATCAACAAAAAGAGAGTTCCTTGATCGTACTGTAAAATGCTAGAATGTCAAATTGTCAAACAATACAGGGGACGGAAGTTAGGACATTAAAGAGAAGGATCCTCTCTCCATAAGCGATTCTAATTAAATTGGATGATCTCGATAGCACACGCATTTCCAGGGTTGGATGCTGAATGTTCCTAAAAATGTTGGTGGATAATTATCAGGAATAACACTCAAAGTTTGTCAACCACAGCCACTCCAATAGGAACCACTTCCACAATTCTTTGGACTACAAGATCATGTAAGACTGCCATCATCATCAATCAATAGCTCTCTTTTTTGTCAACTGTTTTAATGATTGTTCCGTTCAGGAAGGAGACCAAAACTAGCTGTTATTCCATTCATCTTCCTTAGATTTTATTAATCTTTCCCAA

Coding sequence (CDS)

ATGGCTACTGCCTCCGCTACCCTCTCGACGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGTCCATTATATTACTGGGCTTAACTCCTTTGGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTTATTGGAGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGA

Protein sequence

MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE

Homology

[Close]

BLAST of Pay0001806 vs. ExPASy Swiss-Prot
Match: P80883 (Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea OX=3562 GN=petM PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 88  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE 124
           NAA EIFRIAA++NGL L+GVA+GFVLLRIEA+VEE
Sbjct: 1   NAAAEIFRIAAVMNGLTLVGVAIGFVLLRIEATVEE 36

[Close]

BLAST of Pay0001806 vs. ExPASy TrEMBL
Match: A0A1S3C0U4 (uncharacterized protein LOC103495201 OS=Cucumis melo OX=3656 GN=LOC103495201 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.6e-57
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60
           MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS
Sbjct: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60

Query: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120
           FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120

Query: 121 VEEAE 126
           VEEAE
Sbjct: 121 VEEAE 125

[Close]

BLAST of Pay0001806 vs. ExPASy TrEMBL
Match: A0A0A0K4W4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075020 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54
Identity = 119/125 (95.20%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60
           MATASATLSTAMS+AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQS
Sbjct: 77  MATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQS 136

Query: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120
           FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 137 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 196

Query: 121 VEEAE 126
           VEEAE
Sbjct: 197 VEEAE 201

[Close]

BLAST of Pay0001806 vs. ExPASy TrEMBL
Match: A0A6J1I5T0 (uncharacterized protein LOC111470941 OS=Cucurbita maxima OX=3661 GN=LOC111470941 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.9e-53
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 2   ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSF 61
           ATASATLS A+STAAPIAAGSRRQR TNVHYITGLNSFGGLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATASATLSPAISTAAPIAAGSRRQRNTNVHYITGLNSFGGLKAHNNIFSLGLPVCADQSF 62

Query: 62  AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 121
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 122 EEAE 126
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of Pay0001806 vs. ExPASy TrEMBL
Match: A0A6J1GND2 (uncharacterized protein LOC111455503 OS=Cucurbita moschata OX=3662 GN=LOC111455503 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 2   ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSF 61
           AT SATLS  +STAAPIAAGSRRQR TNVHYITGLNSF GLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATPSATLSPPISTAAPIAAGSRRQRNTNVHYITGLNSFSGLKAHNNITSLGLPVCADQSF 62

Query: 62  AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 121
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ASIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 122 EEAE 126
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of Pay0001806 vs. ExPASy TrEMBL
Match: A0A6J1C3G5 (uncharacterized protein LOC111008007 OS=Momordica charantia OX=3673 GN=LOC111008007 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.3e-49
Identity = 116/128 (90.62%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MATASATLSTAMSTAAPIAAGSRR-QRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQ 60
           MATASATLS AMSTAAPIAAGSRR QR  NVHYITGLNSFGGLKAHNNVVSLGLP+C D 
Sbjct: 1   MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDH 60

Query: 61  SFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRI 120
           SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRI
Sbjct: 61  SFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRI 120

Query: 121 EASVEEAE 126
           EA VEE E
Sbjct: 121 EAYVEETE 128

[Close]

BLAST of Pay0001806 vs. NCBI nr
Match: XP_008454894.1 (PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60
           MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS
Sbjct: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60

Query: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120
           FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120

Query: 121 VEEAE 126
           VEEAE
Sbjct: 121 VEEAE 125

[Close]

BLAST of Pay0001806 vs. NCBI nr
Match: XP_038887487.1 (uncharacterized protein LOC120077620 [Benincasa hispida])

HSP 1 Score: 222.6 bits (566), Expect = 1.9e-54
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60
           MATASATLS AM TAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS
Sbjct: 1   MATASATLSPAMPTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60

Query: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120
           FA I+SSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 61  FANIMSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120

Query: 121 VEEAE 126
           VEEAE
Sbjct: 121 VEEAE 125

[Close]

BLAST of Pay0001806 vs. NCBI nr
Match: XP_004136999.1 (uncharacterized protein LOC101210164 [Cucumis sativus] >KAE8645889.1 hypothetical protein Csa_017701 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 9.2e-54
Identity = 119/125 (95.20%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60
           MATASATLSTAMS+AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQS
Sbjct: 45  MATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQS 104

Query: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120
           FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 105 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 164

Query: 121 VEEAE 126
           VEEAE
Sbjct: 165 VEEAE 169

[Close]

BLAST of Pay0001806 vs. NCBI nr
Match: XP_022972366.1 (uncharacterized protein LOC111470941 [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 6.0e-53
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 2   ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSF 61
           ATASATLS A+STAAPIAAGSRRQR TNVHYITGLNSFGGLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATASATLSPAISTAAPIAAGSRRQRNTNVHYITGLNSFGGLKAHNNIFSLGLPVCADQSF 62

Query: 62  AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 121
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 122 EEAE 126
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of Pay0001806 vs. NCBI nr
Match: XP_023554105.1 (uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 8.6e-52
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 2   ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSF 61
           ATASATLS  +STAAPIAAGSRRQR  NVHYITGLNSFGGLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATASATLSPPISTAAPIAAGSRRQRNANVHYITGLNSFGGLKAHNNIFSLGLPVCADQSF 62

Query: 62  AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 121
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 122 EEAE 126
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of Pay0001806 vs. TAIR 10
Match: AT2G26500.2 (cytochrome b6f complex subunit (petM), putative )

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 73/126 (57.94%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 2   ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQS 61
           A A A +S   S     +  ++++ +  V YITGLNS+GGLKA NN VVS+G P+C +Q 
Sbjct: 4   AAAPAVISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQC 63

Query: 62  FAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA 121
           FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI+N L L+GVAVGFVLLRIE 
Sbjct: 64  FANVVMSL------KGRRGNGGALSTTCNAVGEIFKIAAIMNALTLVGVAVGFVLLRIET 123

Query: 122 SVEEAE 126
           SVEEAE
Sbjct: 124 SVEEAE 123

[Close]

BLAST of Pay0001806 vs. TAIR 10
Match: AT2G26500.1 (cytochrome b6f complex subunit (petM), putative )

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 73/126 (57.94%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 2   ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQS 61
           A A A +S   S     +  ++++ +  V YITGLNS+GGLKA NN VVS+G P+C +Q 
Sbjct: 4   AAAPAVISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQC 63

Query: 62  FAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA 121
           FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI+N L L+GVAVGFVLLRIE 
Sbjct: 64  FANVVMSL------KGRRGNGGALSTTCNAVGEIFKIAAIMNALTLVGVAVGFVLLRIET 123

Query: 122 SVEEAE 126
           SVEEAE
Sbjct: 124 SVEEAE 123

[Close]

BLAST of Pay0001806 vs. TAIR 10
Match: AT2G26500.3 (cytochrome b6f complex subunit (petM), putative )

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-11
Identity = 49/125 (39.20%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 2   ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQS 61
           A A A +S   S     +  ++++ +  V YITGLNS+GGLKA NN VVS+G P+C +Q 
Sbjct: 4   AAAPAVISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQC 63

Query: 62  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 121
           FA +V SLK                                     G  VGFVLLRIE S
Sbjct: 64  FANVVMSLK-------------------------------------GRRVGFVLLRIETS 91

Query: 122 VEEAE 126
           VEEAE
Sbjct: 124 VEEAE 91

The following BLAST results are available for this feature:

BLAST of Pay0001806 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80883	1.0e-07	80.56	Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea OX=3562 GN=pet...	[more]

BLAST of Pay0001806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0U4	5.6e-57	100.00	uncharacterized protein LOC103495201 OS=Cucumis melo OX=3656 GN=LOC103495201 PE=...	[more]
A0A0A0K4W4	4.5e-54	95.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075020 PE=3 SV=1	[more]
A0A6J1I5T0	2.9e-53	94.35	uncharacterized protein LOC111470941 OS=Cucurbita maxima OX=3661 GN=LOC111470941...	[more]
A0A6J1GND2	1.6e-51	91.94	uncharacterized protein LOC111455503 OS=Cucurbita moschata OX=3662 GN=LOC1114555...	[more]
A0A6J1C3G5	3.3e-49	90.63	uncharacterized protein LOC111008007 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of Pay0001806 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454894.1	1.2e-56	100.00	PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]	[more]
XP_038887487.1	1.9e-54	96.80	uncharacterized protein LOC120077620 [Benincasa hispida]	[more]
XP_004136999.1	9.2e-54	95.20	uncharacterized protein LOC101210164 [Cucumis sativus] >KAE8645889.1 hypothetica...	[more]
XP_022972366.1	6.0e-53	94.35	uncharacterized protein LOC111470941 [Cucurbita maxima]	[more]
XP_023554105.1	8.6e-52	92.74	uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0001806 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26500.2	1.6e-27	57.94	cytochrome b6f complex subunit (petM), putative	[more]
AT2G26500.1	1.6e-27	57.94	cytochrome b6f complex subunit (petM), putative	[more]
AT2G26500.3	6.0e-11	39.20	cytochrome b6f complex subunit (petM), putative	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012595	PetM of cytochrome b6/f complex subunit 7	PFAM	PF08041	PetM	coord: 91..118 e-value: 8.2E-10 score: 38.1
IPR012595	PetM of cytochrome b6/f complex subunit 7	HAMAP	MF_00396	Cytb6_f_PetM	coord: 89..121 score: 13.016713
None	No IPR available	PANTHER	PTHR34951	B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED	coord: 1..125
None	No IPR available	PANTHER	PTHR34951:SF1	B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED	coord: 1..125
None	No IPR available	SUPERFAMILY	103441	PetM subunit of the cytochrome b6f complex	coord: 90..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001806.1	Pay0001806.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0016021	integral component of membrane