Pay0001502 (gene) Melon (Payzawat) v1

Overview
NamePay0001502
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Locationchr02: 23221397 .. 23225639 (+)
RNA-Seq ExpressionPay0001502
SyntenyPay0001502
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGGTTTTGGAAGCCCACTTCACTTTAAACTTCTCTCTTCTTCCTTCTCCCTTCTCCCATTTCCTACTCTTCCACAATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTTCTTTCTCCTTCAATTCCTTCCTAAATTATCTCGTCATTCAATCTTTTCACCTTTTGGTTGATCCACAGGTGGATCCTTCCTCACTTTCTTCTCGCCGTGGATTTCACGTCGAACCAGGGACTCGTGAAAAGGCTGTAAGCATATCTAACTTCTTCTTCTTATTATTTTCCGTCTTTAATTTTTATTCTACCTGTTTATTGCATCGGTTTGGATAGTTAATTAATTCCTTGTTTACCTCTTACTAGCTCCATTAAGTTGATTGATATCTCGTATGATTCTTTATCTACTTATTTTCGCTTTATGTCAGTATAGATGGAATTTCTTTCCGAAGCTGTTTAGATCGAACTGCTTGAGCTTCTACATTTAGGTCCATGAAATTAACGGCCGCTGTTTTCTACATTAATCTGTTACGATGTTATGGCATGAAAGCTTCGTGAAATTTATTTATTTATTGGTTCTGAATATTAAAGGGTTGATTTGCATGCGTGTTCTCAAACTTTGCAACTATGAATTCCACACCGATACTTGGAAGTTGGAAGTATTTTAGAAAGTATTTATTCCTTCATTTCGCGAAGGATTTGGCTATACATGTGGATAGGTTAACATGTCTACCAAATTTTTGGTTCACCTCTTGTATTTTTTTGATGCAGTTTAGTTCTTGTGTAGATCATTGCAATGATTTATTGGTGCATTGAATTTTATTATGTTGAATGTCTGGCAGTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACACAAGAAAGCCGTCTCTCGACTCAAAACTTTCGGAGATGTTTTGACAATTGTGGTTATTGCAGGTATTGGTCCTTTTTTTTCATTAAATAAAATATGTTTCTCTTTGGCCCGTGGGGTTCTTGCTCTGCTCTTTTTGCTATTATAGCTACATTGATGTGGATGGTGTGTGTGTGGATGAAATGTTTGGATGGTGTACGTTCTTATTGTGTTACAAGAATGTCAAGTCTTTACTCGTTCCTTAGAGGTGAAAATTAGCTCTAGGCATTTTGATCCGGTTTATTCTTAGTATTGTATTAGCTGAAAAGTATCTTAGGTTAACTCAGAAGGTAGAAATAATACCTACTGAAGTGGAAGAAAGGGGTAGCAGCTTGTATGGTGTGTTTTTAGTAGATTCGTTGGGTTTCAATGACTGCAAAAGAAGAAACTTGAGACTCAAATTCAGAACAAAATAGTGTTTAGTTAAATAAATGCCAATGTTTAAGTTGATCGAAATTTTGGATTTATCTTATAAGAACTTTTACTGATATGTGAATTTTGGAGATGATATTTCTTTTAGTACTAACAGTCATTCAAACTTGCCACTCTATTGACCAAACCAGGTACAGGTTTTCTTAATTTAGGATAGTGGTAACTGCCAGATTAATATTAGTTTCATTTACAGTTTAGTGGTCTCAACCTTGAGTTCTATCTAAGGATGTTATTAGGTGATACAGCTAGCTAATAACAGGTCGATTGAAAGTCTAAGTAGCTATTTTTCCTGTTTATTTAAGTATCATGGTAGACATTAGATCAAGTAGTAAATGCACATACAAGTTACTTATTTTCTTTGCAATTTTGATTCTCTTTACAAATTGTTTGTGTTGAATGATACTGACGTGTTTTAATAGCTAGTTAAAATTTCTATTTCCTTGACTTTTGGCTAGCCTGAAAGTACCTAGAAATCTTTAGTTTTTTATTACCTAAAAAGTAGAAGAGGAGGAATACAATAAAATTCTTCAAGATACTACATAACAAACAGGATAATAATCTAGTATGACTCTCCTTGAAGAGAACAGCAAAACAAAACACTCTTCCAGACATTGTTCATATGAGCTTTTCTGTCCTCAAAAGATTCTTCTCTTTCTTTCTTCTTAGCTCCCTTAATTCTCTACAAAAACAGGAATGATTATACTGAATATGATCTTGGTTGCCAGTGATGCCAATTGCCGCCATATAATTTGGGTCCTTAATAATTCTGCAGAAACCCAATCAAACAAAAGATTTTCGGCTACTTCCATTGAAGTGGTCAAGAGACCGGTTTCTAGAGGCCTGGTAATCTAGTTCTCCAATGAGCTTTAACCACCTTGAGGTTTCATGCGCGTGCTCGCTCACACTCCTATATATATGAAAATATGTCTGTCAAGCAGGTCATGAGTGTTGATTAATTTGCGAAGCAGTAAGAAAATGAAGACCACCTCTAAGCTGCACATCATATTCACCAACTTATTAGGCAACTCTGTGTTTCCATAGTTTGATTCAGCAATATTACATTAGTTGAACTTAATATTTGCTTCCAGCCTCCATATGCTAGAGCCTAGAGCCCTCATCTCCAAAAACATTCGTAAGGATGCCAATAATGCTCCCTATTATTCAGATTTCTCCAAAAATGACAATTCAAACTGGTAGAAAATGAACATTTTAAGTTTTAACGTTAAGTCCAGTGAAGCGTGTGAAATTTCCAGATGTGGGCAATATCTTGTTTGCCGTGCCTAAGTAACTGAGCTCATACACTAACATTTGATCTCCCCACAAACTTTATTTCCATGACTAGAATGTGAACAGTGAAGCTTTTCTCTCTCTCCAGTTTTGAGTGCCTCGCATTTACACTAGGTTGGTGTTAGGAACCAAGGTAGTTATGAGATGTCTTTGTATTGTAGGAACCAAGGTAGTTATGAGATGCCTTTGTAATGTAGGAACCAAGGTAGGAATGCAATGCTTTGTGTCCCACATTGGTTAGAATGGGATGACCAATATGGTATTTAAGTGGCTTGGCTCTCCCATCCTAATATTTGGCTTTTGGGATGTGGTTATCTGAGGTGCTTAAGTACCTAACAATAGTATCAGAGTCAGTTGTCGATGTTTCAGAGTGGAACTGGTGTAGGGTTCTGATTGGGAGTAGCCAAGTGAAGTACCACAAGAGTAGCCGTCGGGGTGTCGACTTTTCGAGGATGAGGTACTGTTAAGAACCAAGTTAGTTATGGGACGAACAATATGGTACTTAAGCGGCTTGGCTCTCTCACCCCTATTGTTGCCTTGGGGTGTGGTTCTCCAAGGTACTTAAGTACCTAACAGCTGCCTGATGTGTGAATTGGCATGGTGTCGAAACATCTTTGATTTTTTCTCTTTTCATGTTCTATGTTCTGAGCTCTCCTGGTCACTAGAAGTTTCTTTTTTTCTTCCTTATTTTAATTTCTGCAATGTTACCATTATCTTTGTTTTTATTTCAAGAAATAAAAACATTCATTATCAAAGGGATATACAAAAAGATGGGGGAAATGGGATATATCCACACACCAAGTATAGGAGGGTAAAATTTTCAATATAGGACGGTACTTCCAGTTTTTCCTGAAAATTTATTGGTCAGGTGGTTAAGTGGAAAAGCTTGGGAGTGAAAGCGTCAAGATCTGTTTTGTGGGTCACTTGTTTAGAAAGAAATGACATAAATTCTAACACAACATGCATAGCATTTTAAGAGATGGAGAAATTCTCTCGTCAAAGTCTTACAAATCATTTGTTAATTTATCCTCTTTCGTCAAAGGGACTCTTTTGTTCTTTTATCTACCCATGTTTGATGGTAGGAAGAATATCTCTCAAGGGATGTTTGGTCTACCAACTTATAACTAAATTCATCAACTTCATTAGTGTTCGCTATTGAAAATTTTACCCTCTTATACTAAAAAGAAAAGAAAAAGTGTTCGCAATTGAAGTTTCTATTGTATCTTCTCTTCTAGACTAAACAACTCTACGCTCTAAACATAGATTTCATAACTCCAATATATTAACTCTCGACTTACAACTCAATCCTTAGTATCTCTTCCATTCCTTTGAATGACATTTTTACATCTTTTACTTCCCCAACCCCAAAATAAATAAATTTTTGATCTCTATCATTATATTTTTCAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGACAAGAAGCTCGACAGGCAAAGACAGGTAGCGAAAGCACATGATGGAGTTTGTATCCATTGGCAATTAAAATGTCTGGCAAAGTCCTTAATGCTTGCATCTGTGTGCTAAATAAAGGTCGAGTTTTTTTTTTTTTTTTTCTTTT

mRNA sequence

GAAAGGTTTTGGAAGCCCACTTCACTTTAAACTTCTCTCTTCTTCCTTCTCCCTTCTCCCATTTCCTACTCTTCCACAATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTTCTCGCCGTGGATTTCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACACAAGAAAGCCGTCTCTCGACTCAAAACTTTCGGAGATGTTTTGACAATTGTGGTTATTGCAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGACAAGAAGCTCGACAGGCAAAGACAGGTAGCGAAAGCACATGATGGAGTTTGTATCCATTGGCAATTAAAATGTCTGGCAAAGTCCTTAATGCTTGCATCTGTGTGCTAAATAAAGGTCGAGTTTTTTTTTTTTTTTTTCTTTT

Coding sequence (CDS)

ATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTTCTCGCCGTGGATTTCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACACAAGAAAGCCGTCTCTCGACTCAAAACTTTCGGAGATGTTTTGACAATTGTGGTTATTGCAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGACAAGAAGCTCGACAGGCAAAGACAGGTAGCGAAAGCACATGA

Protein sequence

MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST
Homology
[Close]
BLAST of Pay0001502 vs. ExPASy Swiss-Prot
Match: Q3E870 (Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH7B PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-28
Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFR-SQSQVDPSSLS-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKA 60
           MAF LN ++++SH R S SQ    +LS SRRGFH+EPGTREKALLAED  L+RF+SHKK+
Sbjct: 1   MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61  VSRLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGS 99
           V +LK  GDVLT+VV+AGCCYEIYVKA M++EA  A   S
Sbjct: 61  VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 100

[Close]
BLAST of Pay0001502 vs. ExPASy Swiss-Prot
Match: Q9C5E8 (Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH7A PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-25
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0 

Query: 1  MAFFLNKSTLASHFRSQSQ-VDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN S ++SH RS SQ  D +   SRRGFHVE G REKALLAED  LRRF+SHKK V
Sbjct: 1  MAFLLNTS-ISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQA 95
           RLK  GDVLT+VV+AGCCYEIY +  MR+EA+ A
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQAA 93

[Close]
BLAST of Pay0001502 vs. ExPASy Swiss-Prot
Match: Q6H611 (Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH7 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.8e-11
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 0 

Query: 8  STLASHFRS---QSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKT 67
          S L S  RS   Q+   P     RRGFHVE G REKALL ED  L+RF+S+K +V ++  
Sbjct: 8  SALRSRLRSPQPQAPALPHLQPPRRGFHVELGAREKALLEEDTALKRFKSYKNSVKQVSK 67

Query: 68 FGDVLTIVVIAGCCYEIYVKA 86
           G++LT VV+  C YEI   A
Sbjct: 68 VGNILTGVVLFACAYEIVALA 88

[Close]
BLAST of Pay0001502 vs. ExPASy TrEMBL
Match: A0A1S3BW83 (succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493932 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 102
           RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST
Sbjct: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 101

[Close]
BLAST of Pay0001502 vs. ExPASy TrEMBL
Match: A0A0A0LUC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005670 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.6e-41
Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
          MAFFLNKSTLASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS
Sbjct: 1  MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 61 RLKTFGDVLTIVVIAGCCYEIYVKATMRQEA-RQAKTG 98
          RLK  GDVLTIVV+AGCCYEIYVKATMR+EA RQAKTG
Sbjct: 61 RLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 97

[Close]
BLAST of Pay0001502 vs. ExPASy TrEMBL
Match: A0A6J1C1M2 (succinate dehydrogenase subunit 7B, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111007450 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.6e-40
Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAFFLN++TLASHFRSQSQ DPSSL SRRGFHVEPGTREKALLAEDP LRRFRSHKK VS
Sbjct: 1   MAFFLNRTTLASHFRSQSQADPSSL-SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVS 60

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 102
           R+K  GD+LTIVV+AGCCYEIYVKATMR+EARQAKT S ST
Sbjct: 61  RIKRMGDILTIVVVAGCCYEIYVKATMREEARQAKTASGST 100

[Close]
BLAST of Pay0001502 vs. ExPASy TrEMBL
Match: A0A6J1HVK4 (succinate dehydrogenase subunit 7A, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111468234 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.6e-39
Identity = 86/101 (85.15%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAF LNK+TLASHFRSQSQ DPS+L SRRGFHVEPGTREKALLAEDP LRRFRSHKK VS
Sbjct: 1   MAFLLNKTTLASHFRSQSQADPSTL-SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVS 60

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 102
           R+K  GDVLTIVV+AGCCYEIYV+ATMR+EARQAKT S ST
Sbjct: 61  RIKKIGDVLTIVVVAGCCYEIYVRATMREEARQAKTASGST 100

[Close]
BLAST of Pay0001502 vs. ExPASy TrEMBL
Match: A0A6J1E5D6 (succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111429643 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.7e-38
Identity = 84/101 (83.17%), Postives = 91/101 (90.10%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAF L K++LASHFRSQSQVDPSS  SRRGFH+EPGTREKALLAEDP LRRFRSHKK V+
Sbjct: 12  MAFLLTKTSLASHFRSQSQVDPSS-PSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVA 71

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 102
           R+K  GDVLTIVV+AGCCYEIYVKATMR+EARQAK  SEST
Sbjct: 72  RIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST 111

[Close]
BLAST of Pay0001502 vs. NCBI nr
Match: XP_008453123.1 (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like [Cucumis melo])

HSP 1 Score: 200.3 bits (508), Expect = 8.0e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 102
           RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST
Sbjct: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 101

[Close]
BLAST of Pay0001502 vs. NCBI nr
Match: XP_004138127.1 (succinate dehydrogenase subunit 7B, mitochondrial isoform X1 [Cucumis sativus] >KAE8652406.1 hypothetical protein Csa_013486 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 6.6e-42
Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAFFLNKSTLASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEA-RQAKTGSEST 102
           RLK  GDVLTIVV+AGCCYEIYVKATMR+EA RQAKTGS ST
Sbjct: 61  RLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 101

[Close]
BLAST of Pay0001502 vs. NCBI nr
Match: XP_031741717.1 (succinate dehydrogenase subunit 7B, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 9.5e-41
Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
          MAFFLNKSTLASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS
Sbjct: 1  MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 61 RLKTFGDVLTIVVIAGCCYEIYVKATMRQEA-RQAKTG 98
          RLK  GDVLTIVV+AGCCYEIYVKATMR+EA RQAKTG
Sbjct: 61 RLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 97

[Close]
BLAST of Pay0001502 vs. NCBI nr
Match: XP_022135509.1 (succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAFFLN++TLASHFRSQSQ DPSSL SRRGFHVEPGTREKALLAEDP LRRFRSHKK VS
Sbjct: 1   MAFFLNRTTLASHFRSQSQADPSSL-SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVS 60

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 102
           R+K  GD+LTIVV+AGCCYEIYVKATMR+EARQAKT S ST
Sbjct: 61  RIKRMGDILTIVVVAGCCYEIYVKATMREEARQAKTASGST 100

[Close]
BLAST of Pay0001502 vs. NCBI nr
Match: XP_023529214.1 (succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-39
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAF LNK+T ASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDP LRRFRSHKK VS
Sbjct: 1   MAFLLNKTTFASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVS 60

Query: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 102
           R+K  GDVLTIVV+AGCCYEIYVKATMR+EARQAKT S ST
Sbjct: 61  RIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 100

[Close]
BLAST of Pay0001502 vs. TAIR 10
Match: AT5G62575.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-30
Identity = 64/99 (64.65%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MAFFLNKSTLASHFRSQSQVDPSSLS-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN ++++SH RS S     +LS SRRGFH+EPGTREKALLAED  L+RF+SHKK+V
Sbjct: 1  MAFLLNNASISSHLRSSSSQTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKSV 60

Query: 61 SRLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGS 99
           +LK  GDVLT+VV+AGCCYEIYVKA M++EA  A   S
Sbjct: 61 HKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 99

[Close]
BLAST of Pay0001502 vs. TAIR 10
Match: AT5G62575.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAFFLNKSTLASHFR-SQSQVDPSSLS-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKA 60
           MAF LN ++++SH R S SQ    +LS SRRGFH+EPGTREKALLAED  L+RF+SHKK+
Sbjct: 1   MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61  VSRLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGS 99
           V +LK  GDVLT+VV+AGCCYEIYVKA M++EA  A   S
Sbjct: 61  VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 100

[Close]
BLAST of Pay0001502 vs. TAIR 10
Match: AT3G47833.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 3.2e-26
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0 

Query: 1  MAFFLNKSTLASHFRSQSQ-VDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN S ++SH RS SQ  D +   SRRGFHVE G REKALLAED  LRRF+SHKK V
Sbjct: 1  MAFLLNTS-ISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQA 95
           RLK  GDVLT+VV+AGCCYEIY +  MR+EA+ A
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQAA 93

The following BLAST results are available for this feature:
BLAST of Pay0001502 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3E8701.9e-2865.00Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q9C5E84.4e-2566.32Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q6H6112.8e-1148.15Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of Pay0001502 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BW833.9e-48100.00succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucumis melo OX=3656 G... [more]
A0A0A0LUC04.6e-4193.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005670 PE=4 SV=1[more]
A0A6J1C1M26.6e-4086.14succinate dehydrogenase subunit 7B, mitochondrial-like OS=Momordica charantia OX... [more]
A0A6J1HVK45.6e-3985.15succinate dehydrogenase subunit 7A, mitochondrial-like OS=Cucurbita maxima OX=36... [more]
A0A6J1E5D64.7e-3883.17succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucurbita moschata OX=... [more]
BLAST of Pay0001502 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453123.18.0e-48100.00PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like [Cucumis melo][more]
XP_004138127.16.6e-4293.14succinate dehydrogenase subunit 7B, mitochondrial isoform X1 [Cucumis sativus] >... [more]
XP_031741717.19.5e-4193.88succinate dehydrogenase subunit 7B, mitochondrial isoform X2 [Cucumis sativus][more]
XP_022135509.11.4e-3986.14succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia][more]
XP_023529214.12.3e-3987.13succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pe... [more]
BLAST of Pay0001502 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G62575.12.1e-3064.65unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G62575.21.4e-2965.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G47833.13.2e-2666.32unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..38
IPR034573Succinate dehydrogenase subunit 7, mitochondrialPANTHERPTHR36041SUCCINATE DEHYDROGENASE SUBUNIT 7A, MITOCHONDRIAL-RELATEDcoord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0001502.2Pay0001502.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function GO:0043495 protein-membrane adaptor activity