Pay0001462 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001462
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Pol protein
Location	chr01: 25336129 .. 25336617 (+)
RNA-Seq Expression	Pay0001462
Synteny	Pay0001462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACTGCACAGAGTAGACAGAAAAGCTATGCTGACGTGAGACAGAAAGATCTTGAGTTTGATGTGGGAGATAAAGTGTTCTTGGAAGTAGCACCTATGAAAGGTGTTTTACGATTTGAAATGAATGGAAAGTTGAGTCCTCATTTTGTTGGACCATTTGAGATTCTAGAGCGAATTGGCCCTGTGGCGTATCGTTTGGTGTTGCCACCATCACTCTCGGCAGTTCATGACGTATTCCATGTTTCTATGTTGAGGAAGTATGTGTCAGATCCATCCCATGTAGTAGATTACAAGCCATTAGAGATTGATGAAAATTTGAGTTATACAGAACAACCAGTTGAGATATTGGCTAGAGAGGTAAAGATGCTGAGAAACAGAGAGATCCCTTTAGTTAAAGTCTTATGGCGGCATCACAAAGTCGAAGAGGCTACATGGGAGAGGGAAGACGACATGAGAACTCGTTATCCAGAGTTGTTTAAGGAATAG

mRNA sequence

ATGCAGACTGCACAGAGTAGACAGAAAAGCTATGCTGACGTGAGACAGAAAGATCTTGAGTTTGATGTGGGAGATAAAGTGTTCTTGGAAGTAGCACCTATGAAAGGTGTTTTACGATTTGAAATGAATGGAAAGTTGAGTCCTCATTTTGTTGGACCATTTGAGATTCTAGAGCGAATTGGCCCTGTGGCGTATCGTTTGGTGTTGCCACCATCACTCTCGGCAGTTCATGACGTATTCCATGTTTCTATGTTGAGGAAGTATGTGTCAGATCCATCCCATGTAGTAGATTACAAGCCATTAGAGATTGATGAAAATTTGAGTTATACAGAACAACCAGTTGAGATATTGGCTAGAGAGGTAAAGATGCTGAGAAACAGAGAGATCCCTTTAGTTAAAGTCTTATGGCGGCATCACAAAGTCGAAGAGGCTACATGGGAGAGGGAAGACGACATGAGAACTCGTTATCCAGAGTTGTTTAAGGAATAG

Coding sequence (CDS)

ATGCAGACTGCACAGAGTAGACAGAAAAGCTATGCTGACGTGAGACAGAAAGATCTTGAGTTTGATGTGGGAGATAAAGTGTTCTTGGAAGTAGCACCTATGAAAGGTGTTTTACGATTTGAAATGAATGGAAAGTTGAGTCCTCATTTTGTTGGACCATTTGAGATTCTAGAGCGAATTGGCCCTGTGGCGTATCGTTTGGTGTTGCCACCATCACTCTCGGCAGTTCATGACGTATTCCATGTTTCTATGTTGAGGAAGTATGTGTCAGATCCATCCCATGTAGTAGATTACAAGCCATTAGAGATTGATGAAAATTTGAGTTATACAGAACAACCAGTTGAGATATTGGCTAGAGAGGTAAAGATGCTGAGAAACAGAGAGATCCCTTTAGTTAAAGTCTTATGGCGGCATCACAAAGTCGAAGAGGCTACATGGGAGAGGGAAGACGACATGAGAACTCGTTATCCAGAGTTGTTTAAGGAATAG

Protein sequence

MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERIGPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILAREVKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE

Homology

[Close]

BLAST of Pay0001462 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDL-EFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILER 60
            + T   + K Y D++ +++ EF  GD V ++     G L    + KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGPVAYRLVLPPSLSAV-HDVFHVSMLRKY 89
             GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0001462 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDL-EFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILER 60
            + T   + K Y D++ +++ EF  GD V ++     G L    + KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGPVAYRLVLPPSLSAV-HDVFHVSMLRKY 89
             GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0001462 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDL-EFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILER 60
            + T   + K Y D++ +++ EF  GD V ++     G L    + KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGPVAYRLVLPPSLSAV-HDVFHVSMLRKY 89
             GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0001462 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDL-EFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILER 60
            + T   + K Y D++ +++ EF  GD V ++     G L    + KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGPVAYRLVLPPSLSAV-HDVFHVSMLRKY 89
             GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0001462 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDL-EFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILER 60
            + T   + K Y D++ +++ EF  GD V ++     G L    + KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGPVAYRLVLPPSLSAV-HDVFHVSMLRKY 89
             GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0001462 vs. ExPASy TrEMBL
Match: A0A5A7SPY1 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002600 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 156/162 (96.30%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
           MQ AQSRQKSYA+VRQKDLEFDVGDKVFLEVAPMKGVLRFE NGKLSPHFVGPFEILERI
Sbjct: 269 MQIAQSRQKSYAEVRQKDLEFDVGDKVFLEVAPMKGVLRFEKNGKLSPHFVGPFEILERI 328

Query: 61  GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
           GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE
Sbjct: 329 GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 388

Query: 121 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
           VKMLRNREIPLVKVLWRHHKVEEATWEREDDMR  Y ELFKE
Sbjct: 389 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRACYTELFKE 430

[Close]

BLAST of Pay0001462 vs. ExPASy TrEMBL
Match: A0A5D3E483 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00130 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.9e-79
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
           MQ AQSRQKSYA+VRQKDLEFDVGDKVFLEVAPMKGVLRFE NGKLSPHFVGPFEILERI
Sbjct: 269 MQIAQSRQKSYAEVRQKDLEFDVGDKVFLEVAPMKGVLRFEKNGKLSPHFVGPFEILERI 328

Query: 61  GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
           GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE
Sbjct: 329 GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 388

Query: 121 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYP 158
           VKMLRNREIPLVKVLWRHHKVEEATWEREDDMR   P
Sbjct: 389 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRASPP 425

[Close]

BLAST of Pay0001462 vs. ExPASy TrEMBL
Match: A0A5A7SYV5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00190 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.6e-78
Identity = 148/162 (91.36%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
           MQ AQSRQKSYADVR+KDLEFDVGDKVFL+VAPMKGVLRFE  GKLSP FVGPFEILERI
Sbjct: 234 MQAAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 293

Query: 61  GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
           GPVAYRL LPPSLSAVHDVFHVSMLRKYVSDPSHVVDY+PLEIDENLSYTEQPVE+LARE
Sbjct: 294 GPVAYRLALPPSLSAVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPVEVLARE 353

Query: 121 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
           VKMLRNREIPLVKVLWR+H+VEEATWE+EDDMR+RYPELF+E
Sbjct: 354 VKMLRNREIPLVKVLWRNHRVEEATWEQEDDMRSRYPELFEE 395

[Close]

BLAST of Pay0001462 vs. ExPASy TrEMBL
Match: A0A5A7UCD5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00810 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 9.8e-78
Identity = 146/162 (90.12%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
            MQTAQSRQKSYADVR+KDLEFDVGDKVFL+VAPMKGVLRF+  GKLSP FVGPFEILERI
Sbjct: 1270 MQTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFKRRGKLSPRFVGPFEILERI 1329

Query: 61   GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
            GPVAYRL LPPSLS VH+VFHVSMLRKYVSDPSHVVDY+PLEIDENLSYTEQP+E+LARE
Sbjct: 1330 GPVAYRLALPPSLSTVHNVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPIEVLARE 1389

Query: 121  VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
            VKMLRNREIPLVKVLWR+H+VEEATWEREDDMR+RYPELF+E
Sbjct: 1390 VKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1431

[Close]

BLAST of Pay0001462 vs. ExPASy TrEMBL
Match: A0A5A7SNL9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002490 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 145/162 (89.51%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
            M TAQSRQKSYADVR+KDL+FDVGDKVFL+VAPM+GVLRFE  GKLSP FVGPFEILERI
Sbjct: 989  MHTAQSRQKSYADVRRKDLKFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERI 1048

Query: 61   GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
            GPVAYRL LPPSLS VHDVFHVSMLRKYVSDPSHVVDY+PLEIDENLSYTEQP+E+LARE
Sbjct: 1049 GPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPIEVLARE 1108

Query: 121  VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
            VKMLRNREIPLVKVLWR+H+VEEATWEREDDMR+RYPELF+E
Sbjct: 1109 VKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1150

[Close]

BLAST of Pay0001462 vs. NCBI nr
Match: KAA0026261.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 156/162 (96.30%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
           MQ AQSRQKSYA+VRQKDLEFDVGDKVFLEVAPMKGVLRFE NGKLSPHFVGPFEILERI
Sbjct: 269 MQIAQSRQKSYAEVRQKDLEFDVGDKVFLEVAPMKGVLRFEKNGKLSPHFVGPFEILERI 328

Query: 61  GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
           GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE
Sbjct: 329 GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 388

Query: 121 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
           VKMLRNREIPLVKVLWRHHKVEEATWEREDDMR  Y ELFKE
Sbjct: 389 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRACYTELFKE 430

[Close]

BLAST of Pay0001462 vs. NCBI nr
Match: TYK30696.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
           MQ AQSRQKSYA+VRQKDLEFDVGDKVFLEVAPMKGVLRFE NGKLSPHFVGPFEILERI
Sbjct: 269 MQIAQSRQKSYAEVRQKDLEFDVGDKVFLEVAPMKGVLRFEKNGKLSPHFVGPFEILERI 328

Query: 61  GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
           GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE
Sbjct: 329 GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 388

Query: 121 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYP 158
           VKMLRNREIPLVKVLWRHHKVEEATWEREDDMR   P
Sbjct: 389 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRASPP 425

[Close]

BLAST of Pay0001462 vs. NCBI nr
Match: KAA0035748.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 5.3e-78
Identity = 148/162 (91.36%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
           MQ AQSRQKSYADVR+KDLEFDVGDKVFL+VAPMKGVLRFE  GKLSP FVGPFEILERI
Sbjct: 234 MQAAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 293

Query: 61  GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
           GPVAYRL LPPSLSAVHDVFHVSMLRKYVSDPSHVVDY+PLEIDENLSYTEQPVE+LARE
Sbjct: 294 GPVAYRLALPPSLSAVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPVEVLARE 353

Query: 121 VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
           VKMLRNREIPLVKVLWR+H+VEEATWE+EDDMR+RYPELF+E
Sbjct: 354 VKMLRNREIPLVKVLWRNHRVEEATWEQEDDMRSRYPELFEE 395

[Close]

BLAST of Pay0001462 vs. NCBI nr
Match: KAA0053412.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 2.0e-77
Identity = 146/162 (90.12%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
            MQTAQSRQKSYADVR+KDLEFDVGDKVFL+VAPMKGVLRF+  GKLSP FVGPFEILERI
Sbjct: 1270 MQTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFKRRGKLSPRFVGPFEILERI 1329

Query: 61   GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
            GPVAYRL LPPSLS VH+VFHVSMLRKYVSDPSHVVDY+PLEIDENLSYTEQP+E+LARE
Sbjct: 1330 GPVAYRLALPPSLSTVHNVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPIEVLARE 1389

Query: 121  VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
            VKMLRNREIPLVKVLWR+H+VEEATWEREDDMR+RYPELF+E
Sbjct: 1390 VKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1431

[Close]

BLAST of Pay0001462 vs. NCBI nr
Match: KAA0032380.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.5e-77
Identity = 145/162 (89.51%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1    MQTAQSRQKSYADVRQKDLEFDVGDKVFLEVAPMKGVLRFEMNGKLSPHFVGPFEILERI 60
            M TAQSRQKSYADVR+KDL+FDVGDKVFL+VAPM+GVLRFE  GKLSP FVGPFEILERI
Sbjct: 989  MHTAQSRQKSYADVRRKDLKFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERI 1048

Query: 61   GPVAYRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENLSYTEQPVEILARE 120
            GPVAYRL LPPSLS VHDVFHVSMLRKYVSDPSHVVDY+PLEIDENLSYTEQP+E+LARE
Sbjct: 1049 GPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPIEVLARE 1108

Query: 121  VKMLRNREIPLVKVLWRHHKVEEATWEREDDMRTRYPELFKE 163
            VKMLRNREIPLVKVLWR+H+VEEATWEREDDMR+RYPELF+E
Sbjct: 1109 VKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1150

[Close]

BLAST of Pay0001462 vs. TAIR 10
Match: AT1G42190.1 (GAG/POL/ENV polyprotein )

HSP 1 Score: 41.6 bits (96), Expect = 7.1e-04
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 65  YRLVLPPSLSAVHDVFHVSMLRKYVSDPSHVVDYKPLEIDENL 108
           Y+L LP  + A H VFHVSMLRK ++   +V+   P ++ EN+
Sbjct: 2   YKLDLPTLMDAFHKVFHVSMLRKCITHQENVISEPPPDLLENM 44

The following BLAST results are available for this feature:

BLAST of Pay0001462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.3e-05	36.67	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.3e-05	36.67	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-05	36.67	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.3e-05	36.67	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.3e-05	36.67	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0001462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPY1	1.9e-81	96.30	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002600 PE...	[more]
A0A5D3E483	8.9e-79	96.18	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00130 PE...	[more]
A0A5A7SYV5	2.6e-78	91.36	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00190 PE...	[more]
A0A5A7UCD5	9.8e-78	90.12	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold42...	[more]
A0A5A7SNL9	2.2e-77	89.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]

BLAST of Pay0001462 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026261.1	3.9e-81	96.30	pol protein [Cucumis melo var. makuwa]	[more]
TYK30696.1	1.8e-78	96.18	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035748.1	5.3e-78	91.36	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053412.1	2.0e-77	90.12	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032380.1	4.5e-77	89.51	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0001462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42190.1	7.1e-04	44.19	GAG/POL/ENV polyprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46148:SF21	DOMAIN PROTEIN, PUTATIVE-RELATED	coord: 2..156
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 2..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001462.1	Pay0001462.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding