Pay0001429 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001429
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	UBN2 domain-containing protein
Location	chr06: 29757595 .. 29758368 (-)
RNA-Seq Expression	Pay0001429
Synteny	Pay0001429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAGCAATGACAATGCTATGGGTACAGCACAACCAATCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCATATGAAGACTCTTCTCAGATCTCAAGACTTATGGGACTTAGTAGAACAAGGCTATGCGGATCCTGACGACGAAGACAAGTTGTGGGAGAATAAGAAGAAAGACTCGAAGGCATTGGTGATTATTCAACAAGTAGTCCATGACAGTGTTTTTTCACGGATTGTTGCAGCAACATCGTCAAAACAAGCGTGGTTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTTATGGTTAAATTGCAATCACTTAGACGAGACTTTGAGACCTTGACGATGAAAAATGGAGAATCAATTGCTGATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCGAACATACGACGAGAGGATTACAAATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCTAAAGTTTGATCATGTTGTGGCTGCAATAGAAGAATCAAAGAATCTGTCCACTTTCACATTTATTGAATTAATAGGATCTCTTCAAGCACATGAGTCGAGAATCAATAGATCAATGGAAAGAAACAAAGAAAAAATGTTTCAGGTAAGGGATGTAGTTCCAAAGTATAATGAGAGTGATTGTGTGATGACTCGAGGCCGAGGAAGAAGAGGTTATCGTGGTCGAGGTCATGGTGCCGGCAAAGGATGTAACCAAAATGAAGAACAAAGACAGTTAAGAGTGTAA

mRNA sequence

ATGGGCAGCAATGACAATGCTATGGGTACAGCACAACCAATCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCATATGAAGACTCTTCTCAGATCTCAAGACTTATGGGACTTAGTAGAACAAGGCTATGCGGATCCTGACGACGAAGACAAGTTGTGGGAGAATAAGAAGAAAGACTCGAAGGCATTGGTGATTATTCAACAAGTAGTCCATGACAGTGTTTTTTCACGGATTGTTGCAGCAACATCGTCAAAACAAGCGTGGTTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTTATGGTTAAATTGCAATCACTTAGACGAGACTTTGAGACCTTGACGATGAAAAATGGAGAATCAATTGCTGATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCGAACATACGACGAGAGGATTACAAATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCTAAAGTTTGATCATGTTGTGGCTGCAATAGAAGAATCAAAGAATCTGTCCACTTTCACATTTATTGAATTAATAGGATCTCTTCAAGCACATGAGTCGAGAATCAATAGATCAATGGAAAGAAACAAAGAAAAAATGTTTCAGGTAAGGGATGTAGTTCCAAAGTATAATGAGAGTGATTGTGTGATGACTCGAGGCCGAGGAAGAAGAGGTTATCGTGGTCGAGGTCATGGTGCCGGCAAAGGATGTAACCAAAATGAAGAACAAAGACAGTTAAGAGTGTAA

Coding sequence (CDS)

ATGGGCAGCAATGACAATGCTATGGGTACAGCACAACCAATCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCATATGAAGACTCTTCTCAGATCTCAAGACTTATGGGACTTAGTAGAACAAGGCTATGCGGATCCTGACGACGAAGACAAGTTGTGGGAGAATAAGAAGAAAGACTCGAAGGCATTGGTGATTATTCAACAAGTAGTCCATGACAGTGTTTTTTCACGGATTGTTGCAGCAACATCGTCAAAACAAGCGTGGTTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTTATGGTTAAATTGCAATCACTTAGACGAGACTTTGAGACCTTGACGATGAAAAATGGAGAATCAATTGCTGATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCGAACATACGACGAGAGGATTACAAATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCTAAAGTTTGATCATGTTGTGGCTGCAATAGAAGAATCAAAGAATCTGTCCACTTTCACATTTATTGAATTAATAGGATCTCTTCAAGCACATGAGTCGAGAATCAATAGATCAATGGAAAGAAACAAAGAAAAAATGTTTCAGGTAAGGGATGTAGTTCCAAAGTATAATGAGAGTGATTGTGTGATGACTCGAGGCCGAGGAAGAAGAGGTTATCGTGGTCGAGGTCATGGTGCCGGCAAAGGATGTAACCAAAATGAAGAACAAAGACAGTTAAGAGTGTAA

Protein sequence

MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENKKKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETLTMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLSTFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGHGAGKGCNQNEEQRQLRV

Homology

[Close]

BLAST of Pay0001429 vs. ExPASy TrEMBL
Match: A0A1S3CJ95 (uncharacterized protein LOC103501626 OS=Cucumis melo OX=3656 GN=LOC103501626 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.1e-139
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK
Sbjct: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL
Sbjct: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
           TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS
Sbjct: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180

Query: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240
           TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH
Sbjct: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240

Query: 241 GAGKGCNQNEEQRQLRV 258
           GAGKGCNQNEEQRQLRV
Sbjct: 241 GAGKGCNQNEEQRQLRV 257

[Close]

BLAST of Pay0001429 vs. ExPASy TrEMBL
Match: A0A5A7UQM0 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00340 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.3e-113
Identity = 213/257 (82.88%), Postives = 232/257 (90.27%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           M +N N MGT QP+IPIFKGEGYEFWSI MKTLL SQDLWDLVEQGY DPDDE KL EN+
Sbjct: 1   MSNNGNVMGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENR 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           +KD KALVI+QQ VHD+VFSRI AAT+SKQAWLILQKAFQGDSRVL+VKLQSL+RDFETL
Sbjct: 61  EKDPKALVIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
            MKNGESIADFLSRATTIISQM+TY E IT+QTIVEKVLRSLT KFDHVVAAIEESK+LS
Sbjct: 121 MMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLS 180

Query: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240
           TFTFIEL+GSLQAHESRIN SME+NKEK F+V+DVVPKYN+SDCVMT+G+G  GYR RG 
Sbjct: 181 TFTFIELMGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGR 240

Query: 241 GAGKGCNQNEEQRQLRV 258
           G GKGCNQNEEQRQ  V
Sbjct: 241 GTGKGCNQNEEQRQFGV 257

[Close]

BLAST of Pay0001429 vs. ExPASy TrEMBL
Match: A0A5D3DWP2 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00850 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.8e-100
Identity = 196/230 (85.22%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 28  IHMKTLLRSQDLWDLVEQGYADPDDEDKLWENKKKDSKALVIIQQVVHDSVFSRIVAATS 87
           + +KTLLRSQDLWDLVEQGY DPDDE KL EN+KKDSKALVIIQQ VHDSVFSRI  AT+
Sbjct: 115 VFVKTLLRSQDLWDLVEQGYVDPDDEGKLRENRKKDSKALVIIQQAVHDSVFSRIATATT 174

Query: 88  SKQAWLILQKAFQGDSRVLMVKLQSLRRDFETLTMKNGESIADFLSRATTIISQMRTYDE 147
           SKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL MKNGESIADFLSRATTIISQM+TY E
Sbjct: 175 SKQAWLILQKAFQGDSRVLMVKLQSLRRDFETLMMKNGESIADFLSRATTIISQMQTYGE 234

Query: 148 RITNQTIVEKVLRSLTLKFDHVVAAIEESKNLSTFTFIELIGSLQAHESRINRSMERNKE 207
            I +QTIVEKVLRSLT KFDHVVAAIEESKNL TFTFIEL+GSL+AHESRINRSMERN+E
Sbjct: 235 TIKDQTIVEKVLRSLTPKFDHVVAAIEESKNLFTFTFIELMGSLEAHESRINRSMERNEE 294

Query: 208 KMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGHGAGKGCNQNEEQRQLRV 258
           K FQV+D VPKYN+SD VMTRGRGR GYRGRGHG  KGCN+NE QRQ  V
Sbjct: 295 KAFQVKDAVPKYNDSDRVMTRGRGRGGYRGRGHGTEKGCNRNEAQRQFGV 344

[Close]

BLAST of Pay0001429 vs. ExPASy TrEMBL
Match: A0A5D3BKL0 (UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00120 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.4e-96
Identity = 185/191 (96.86%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           MGSN NAMGTAQP+IPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK
Sbjct: 1   MGSNGNAMGTAQPLIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           KKDSKALVIIQQVVHDSVFSRIVAATSSKQ+WLILQKAFQGDSRVL+VKLQSLRRDFETL
Sbjct: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQSWLILQKAFQGDSRVLVVKLQSLRRDFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
           TMKNGESIADFLSRATTIISQMRTYDE ITNQTIVEKVLRSLT KFDHVVAAIEESKNLS
Sbjct: 121 TMKNGESIADFLSRATTIISQMRTYDETITNQTIVEKVLRSLTPKFDHVVAAIEESKNLS 180

Query: 181 TFTFIELIGSL 192
           TFTFIELIGSL
Sbjct: 181 TFTFIELIGSL 191

[Close]

BLAST of Pay0001429 vs. ExPASy TrEMBL
Match: A0A5D3DWC7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00230 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.8e-95
Identity = 189/257 (73.54%), Postives = 206/257 (80.16%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           M +N N MGTAQP+IPIFKGEGYEFWSI MKTLL SQDLWDLVEQGY DPDDE KL EN+
Sbjct: 1   MSNNGNVMGTAQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENR 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           +KDSKALVIIQQ VHD+VFSRI AAT+                           RDFETL
Sbjct: 61  EKDSKALVIIQQAVHDNVFSRIAAATT---------------------------RDFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
            MKNGESIADFLSRATTIISQM+TY E IT+QTIVEKVLRSLT KFDHVV AIEESK+LS
Sbjct: 121 MMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVVAIEESKDLS 180

Query: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240
           TFTFIEL+GSLQAHESRIN SME+N+EK F+V+DVVPKYN+SDCVMT+G+G  GYR RG 
Sbjct: 181 TFTFIELMGSLQAHESRINISMEKNEEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGR 230

Query: 241 GAGKGCNQNEEQRQLRV 258
           G GKGCNQNEEQRQ  V
Sbjct: 241 GTGKGCNQNEEQRQFGV 230

[Close]

BLAST of Pay0001429 vs. NCBI nr
Match: XP_008463459.1 (PREDICTED: uncharacterized protein LOC103501626 [Cucumis melo])

HSP 1 Score: 503.1 bits (1294), Expect = 1.5e-138
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK
Sbjct: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL
Sbjct: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
           TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS
Sbjct: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180

Query: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240
           TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH
Sbjct: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240

Query: 241 GAGKGCNQNEEQRQLRV 258
           GAGKGCNQNEEQRQLRV
Sbjct: 241 GAGKGCNQNEEQRQLRV 257

[Close]

BLAST of Pay0001429 vs. NCBI nr
Match: KAA0055915.1 (copia protein [Cucumis melo var. makuwa])

HSP 1 Score: 418.3 bits (1074), Expect = 4.8e-113
Identity = 213/257 (82.88%), Postives = 232/257 (90.27%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           M +N N MGT QP+IPIFKGEGYEFWSI MKTLL SQDLWDLVEQGY DPDDE KL EN+
Sbjct: 1   MSNNGNVMGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENR 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           +KD KALVI+QQ VHD+VFSRI AAT+SKQAWLILQKAFQGDSRVL+VKLQSL+RDFETL
Sbjct: 61  EKDPKALVIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
            MKNGESIADFLSRATTIISQM+TY E IT+QTIVEKVLRSLT KFDHVVAAIEESK+LS
Sbjct: 121 MMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLS 180

Query: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240
           TFTFIEL+GSLQAHESRIN SME+NKEK F+V+DVVPKYN+SDCVMT+G+G  GYR RG 
Sbjct: 181 TFTFIELMGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGR 240

Query: 241 GAGKGCNQNEEQRQLRV 258
           G GKGCNQNEEQRQ  V
Sbjct: 241 GTGKGCNQNEEQRQFGV 257

[Close]

BLAST of Pay0001429 vs. NCBI nr
Match: XP_031738054.1 (uncharacterized protein LOC116402652 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106
Identity = 206/257 (80.16%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           M +N NAMGT QP+I IFKGEGYEFWS+ MKTLLRSQDLWDLVE  YADPDDE KL E +
Sbjct: 1   MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           +KDSKALVIIQQ VHDS FSRI   T+SK+AWLILQKAF+GD RVL+VKLQSLR++FETL
Sbjct: 61  RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
            MKN ESIA+FLSRATTIISQM+TY E IT+QTIVEKVLRSLTLKFD VVAAIEESK+LS
Sbjct: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180

Query: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240
           TFTFIEL+GSLQAHESRINRSMERN+EK FQV+DVVPKYN SD VMTRGRGR GYRG+G 
Sbjct: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240

Query: 241 GAGKGCNQNEEQRQLRV 258
           G  KGC QNEE+ Q RV
Sbjct: 241 GTEKGCKQNEEKGQFRV 257

[Close]

BLAST of Pay0001429 vs. NCBI nr
Match: KAE8650579.1 (hypothetical protein Csa_010963 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106
Identity = 206/257 (80.16%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MGSNDNAMGTAQPIIPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDEDKLWENK 60
           M +N NAMGT QP+I IFKGEGYEFWS+ MKTLLRSQDLWDLVE  YADPDDE KL E +
Sbjct: 1   MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60

Query: 61  KKDSKALVIIQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL 120
           +KDSKALVIIQQ VHDS FSRI   T+SK+AWLILQKAF+GD RVL+VKLQSLR++FETL
Sbjct: 61  RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120

Query: 121 TMKNGESIADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLS 180
            MKN ESIA+FLSRATTIISQM+TY E IT+QTIVEKVLRSLTLKFD VVAAIEESK+LS
Sbjct: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180

Query: 181 TFTFIELIGSLQAHESRINRSMERNKEKMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGH 240
           TFTFIEL+GSLQAHESRINRSMERN+EK FQV+DVVPKYN SD VMTRGRGR GYRG+G 
Sbjct: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240

Query: 241 GAGKGCNQNEEQRQLRV 258
           G  KGC QNEE+ Q RV
Sbjct: 241 GTEKGCKQNEEKGQFRV 257

[Close]

BLAST of Pay0001429 vs. NCBI nr
Match: TYK27735.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 374.4 bits (960), Expect = 7.9e-100
Identity = 196/230 (85.22%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 28  IHMKTLLRSQDLWDLVEQGYADPDDEDKLWENKKKDSKALVIIQQVVHDSVFSRIVAATS 87
           + +KTLLRSQDLWDLVEQGY DPDDE KL EN+KKDSKALVIIQQ VHDSVFSRI  AT+
Sbjct: 115 VFVKTLLRSQDLWDLVEQGYVDPDDEGKLRENRKKDSKALVIIQQAVHDSVFSRIATATT 174

Query: 88  SKQAWLILQKAFQGDSRVLMVKLQSLRRDFETLTMKNGESIADFLSRATTIISQMRTYDE 147
           SKQAWLILQKAFQGDSRVLMVKLQSLRRDFETL MKNGESIADFLSRATTIISQM+TY E
Sbjct: 175 SKQAWLILQKAFQGDSRVLMVKLQSLRRDFETLMMKNGESIADFLSRATTIISQMQTYGE 234

Query: 148 RITNQTIVEKVLRSLTLKFDHVVAAIEESKNLSTFTFIELIGSLQAHESRINRSMERNKE 207
            I +QTIVEKVLRSLT KFDHVVAAIEESKNL TFTFIEL+GSL+AHESRINRSMERN+E
Sbjct: 235 TIKDQTIVEKVLRSLTPKFDHVVAAIEESKNLFTFTFIELMGSLEAHESRINRSMERNEE 294

Query: 208 KMFQVRDVVPKYNESDCVMTRGRGRRGYRGRGHGAGKGCNQNEEQRQLRV 258
           K FQV+D VPKYN+SD VMTRGRGR GYRGRGHG  KGCN+NE QRQ  V
Sbjct: 295 KAFQVKDAVPKYNDSDRVMTRGRGRGGYRGRGHGTEKGCNRNEAQRQFGV 344

[Close]

BLAST of Pay0001429 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-11
Identity = 29/83 (34.94%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 15 IPIFKGEGYEFWSIHMKTLLRSQDLWDLVEQGYADPDDE--------DKLWENKKKDSKA 74
          +P+     Y+ WS+ MK +L + D+W++VE+G+ +P++E        D L +++K+D KA
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69

Query: 75 LVIIQQVVHDSVFSRIVAATSSK 90
          L +I Q + +  F ++V ATS+K
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAK 92

[Close]

BLAST of Pay0001429 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-11
Identity = 53/191 (27.75%), Postives = 94/191 (49.21%), Query Frame = 0


Query: 23  YEFWSIHMKTLLRSQDLWDLVEQGY-------------ADPDDEDKLWENKKKDSKALVI 82
           YE W+   K+ L  Q LWD+V  G                P++  K  +   KD+KAL I
Sbjct: 17  YEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEELSKWRDFVVKDAKALQI 76

Query: 83  IQQVVHDSVFSRIVAATSSKQAWLILQKAFQGDS--RVLMVKLQSLRRDFETLTMKNGES 142
           +Q  + DSVF + ++A+S+K  W +L+K  +  +  R+  V ++ L +  E L M + ES
Sbjct: 77  LQSSLTDSVFRKTLSASSAKDVWDLLRKGNEQATIRRLEQVTIRRLEKQLEDLKMVDKES 136

Query: 143 IADFLSRATTIISQMRTYDERITNQTIVEKVLRSLTLKFDHVVAAIEESKNLSTFTFIEL 197
            + +L +A  I+ ++       ++  I + V  +L+  FD + + +EE  ++   T   L
Sbjct: 137 GSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDSMLEELIDVHKMTSKSL 196

The following BLAST results are available for this feature:

BLAST of Pay0001429 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0001429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJ95	7.1e-139	100.00	uncharacterized protein LOC103501626 OS=Cucumis melo OX=3656 GN=LOC103501626 PE=...	[more]
A0A5A7UQM0	2.3e-113	82.88	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00340 ...	[more]
A0A5D3DWP2	3.8e-100	85.22	Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BKL0	4.4e-96	96.86	UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3DWC7	4.8e-95	73.54	Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Pay0001429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463459.1	1.5e-138	100.00	PREDICTED: uncharacterized protein LOC103501626 [Cucumis melo]	[more]
KAA0055915.1	4.8e-113	82.88	copia protein [Cucumis melo var. makuwa]	[more]
XP_031738054.1	4.3e-106	80.16	uncharacterized protein LOC116402652 [Cucumis sativus]	[more]
KAE8650579.1	4.3e-106	80.16	hypothetical protein Csa_010963 [Cucumis sativus]	[more]
TYK27735.1	7.9e-100	85.22	putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]	[more]

BLAST of Pay0001429 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48720.1	1.9e-11	34.94	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]
AT3G21000.1	1.9e-11	27.75	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 60..199 e-value: 6.9E-26 score: 90.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..257
None	No IPR available	PANTHER	PTHR34222:SF30	SUBFAMILY NOT NAMED	coord: 29..249
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 29..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001429.1	Pay0001429.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding