Pay0001340 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001340
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	survival of motor neuron-related-splicing factor 30
Location	chr10: 25625216 .. 25634259 (+)
RNA-Seq Expression	Pay0001340
Synteny	Pay0001340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGGGAGTTAGCGTTTGTGTGTGCGTTCTTCACCATCCTCTGATTCTCCTAAAAACTTTTCCAATTTTGCGCTTTTTTTCCCCTTCTCCTCCTCCTCTGTTCATCCAATTCTACCAAAATAATGCAAGGAGGAGAAGATGTTAGCATTGAAGAGTTGGCTAATAATCTGTCTACCTACAAAGACCAGCTTCACCAGGTGTTCCTCTTCTCCATTTCTTTCTTCCTAATAATCCCCTTCATTTTTTTTTTGTTGAAAATGATTTTGTTTCACTTACTGGGGCTCTCTTTTTTTTAGACTTATTCTAAACAAAATTTGATTTTTATGATCTTTTAAACCTTTTCCGCTGTCATTCTTGACTTCTTCGTAGTACTTTGTATCTGAATTAGGGGTTTGCTTACCGCCTTGGACTGTTGCAGCGAACCCGGAGGGGATGGAAACTGTATTCTGGATAATTGCATCAAGCCTAGAAATTTTGAACTTAATCCACATAAATTAGTGTCAAGATTCTTTTAGGACTTTTCAGTTTTTTATCTGTTGTCCTGATTCTTTATTATACAACCTTTTATTACTTAAGATACTAAAAATCTTGAGCAGGGTTTAAAAGCATCTGAATGGTTTTTATATTTGTATGTGGATTTTTTAATTATCAATCAGTCACTTCCTCCACCTAATTACATGAATTCTTGGCTTCCTCACTTTGTTTCATTTTGTATGTATGTTTTCTTTTCTGTTGGGTAAAATAACTTTTTTCTATTCTGATCCAGGTCAGACAGCTGTTAGATGATGATCCTGGCAACTCTGAATACATTGATATGGAAAAAGAGCTTGAAGAGGTAGTTTGTTTTTTTTTTCCTCCTAGTATGTCTATCCTTCATTGTGAACTCGTCATATGTGTATATATGGTTTAGCACTCCTCATATTCCCGCCGAATGTATTTTTAGGTTCAGCTTCTGCTGTAACACTAACGATCAGAGAACGCTCAGAACTATTATTTTTATTATGTGGGTTTCCAGACATATTTGCTTTATTTTGTTTGTTTGTCTTCCTTTTTCATTTTAAAGGAAACATGTTGTTGAAATAAGAAAGAGTTATGGCCCCTGTGGAGATTGTCATTTTCATTTTTGGGAGAAAGGTGCAGGGAGAATATATAGATACTTTCATTTGATAGATAGACTTTAATCTCTGGTCATAAGTGATCATTATTGGATATGTGTAAAAAATTTGAAACTTCATCAAGATGCACATCACTTCTACCTTGGTTCCCTTGCAGGTGTGCTAATATTCGTGATGGCCAGTCTACCTCCTTTCAGATGCTGATCCTGAGATTTAAGTTCTTGTGTTTTTTTCTTTTTTTTTTTTGGGGATAAATACCTGCTCTTTATGAAATTTACGGTTGGAGATATATTTTTACTGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGGTTTCTGGATCAAATGTAGAAACGGGTGATGACAGTGCATCAATTGGTTTCCAGCAGCCTAAAGAAAATGAAATGGTAAGTTCACATTTGTCCTCATTTGCGCATTGCTTTTTTCTGCTGGAAGCACCATAATGTTATAGATGGTTATAGCCTTAGATTTAAAGCGCACTGCTTGGATCTTAGTGTTGTTCGTTGTGTATGTTAGAACTGTTTTGTGTACGTGCTCACATGTGCAACTGCAAACACATTTGTGTCTGTCTGTGCTTTGAAGGATTAATATCTTTGCCTTATATGGGAGCATCCTCCATAAGCATTAACTCACATGTGGTTTATTCTGATGTGCTAATTTAATAATACTCTGCGGTGCATGTGTTTGGGCTGGTATTCAATTATTTGCCTCTATGTAAGCTTCTACTTCAAAAGTGATTTATATTTTTGATTTCAACCATTACTAACAATTCGAGAATCAATTCTCCATCCGCCCTAATATGGGAAGTGCCGTTTCTTATAGTTGGTAGGGGTGTGTGCTATCATGTGAATCTTTGGGGGAAAGGAACATAGTTTTAGAGGGTCATGTAGTGTCCCTAGTGATGCATGGGTCATTATAAGGTTTCATATTAGATAACATGAGGTTTCATCTCAAAATCAATTGGTAATGAGTAGTCCATGTATCTTGTAAAGTTTGAATTTCTATATATATATATAGATAGATTCTCAACATGCCTTTTCAAGATGGTGACTCTTTGGATTCGCCATGCTTGGATCGACTAAATACCCATTTGGGCTTTAGGGGCCCTGATATCATGTTAAATCACTTGTTGACCCAAATGCTTAAACTAATGACTATTGTGCTTTATTGTGCCATGATCTTTTAAAAAATAATGGTTATAGATTTTTGATCAACTAATTCTCTAGGCCAATTCCTCCAACATTTATATAGAGTTAGTCTCTTTGATGACTTATTGAAACAACCATTCGTGACTTGGAGGGCCTTCTAAGTATTTTAAAGTCCTATTATAACCCCAGGATGATGCCCATTTAGACCATCCATATATTGACCAACAAAGCTTGTCATATAATGCAATATCTAATCTAGAATGTGATATGTGGATTATCTTTCTACAAGTCTTTGATACACGTCATTGTCAATTGGAGTAACCTTTTTACTCCAGTGTTGGACAAAATATAAATCAGCAGGCGTTTTTTACTTGTTTCGTTATGTTTGTCCTGCAACTAGAAACACCTCTTGGTATTCTATAGGCCTTTTGGGTTGTTGCTTTGAAGATCTTTTTCCTTTTAGATATTCATTTTGAAGGTTTTCGGTTGGTATAATGATGCCTTTTTTGAAATATTACAAGGTTTTTAATTTGGCTTGGAATTTAATGCGGTTGTGCATCTTTTAGTTGGCTCCCTTTTTTGGAATTTGATTATGCTTTTGGTTAGTATAGAGTTGTTGGTTTTTGTGTTTTTTTTTAGTTTCTAAGTCAAATGCTTTTCAGTTTTCCCTAGCTCCTCTCTTCTTAGGCCTCTCTTGCTCGGAGCTCAGCAATCGTGACCTTTATTTTAACGTTTTGGTTAGATTTTTAATTTTGGTTCATTGTCAAAACAACCTGAATCAAATTTGTTCTACTTCTACCAGTTGTACAATTGTGCCTTTGAGTGCTCACAAAAATGGTACCTTGTTGAGGAGGTTTTAGTATTATTAGGATTATTATTGATTTTTTTGTATTCCTTCACTGGAGCTTCAATGAAAATTCTTGTTTCTTGTTTCAAAAAGAAGTTAAGAACTCTATAATGGATTTTCATTATGAAATTGCCATTCTGGATCTTATCACTCCCATGCTAAGAAAGATCCATCTTTTTAAATTGTGATCTTAGAAACACAAACACAAATATGGATAAGGGACATAGATACAACATGACATGATGATGCATCAATTTCTAAACTAGGATACAAATATGTTGAGGATAAACTATGTGTGTGTGTATTGATAGAAATGAACAGCTTCCATTGAGAAAAATGAAAGAATACACAGGTGGACAAAAAATCAAGCCCACAAAAAACAGGGGATCCCGAAGGGGGCCAGCTTTACAAAATCATGTCAAGAGGATAATTACAAAAAGTCTTCGAAATTGAAGCCAAAAGAGAAACATGATACCAAAGAATCGATTGAATCTCCCCACTCCCCCTTTCAACTCCCCTAAACACCCTCTTATTCCTCTCCACAAAACCCACAAGATGGCACAAACAGAAGCACGCCTAAGAAACCAACCTTTTTCCCACAAGGCAGATTGAGGAGGAACTCCTCGATCATTCCTTCTAACATCTCTATGAGAAGTATACAACAAGCCAAAAGTCCGGAGAAAATCATCTCAAATGCGCTTGCTAGTTCACAATGCCAAAGAAGGCAATCCAAGTCTTCCTTCGCTTTTCGACACAGAATGCAACATGAAGGACCAACTAACCGAGGCAAAAATTTTGTATTTCTAGAGAAAAACAAAGGCAAAATTCTGGACAACCTATCCAATGTATTGAGGCGGCCATGGAGAACCTGCCAAGAAAAGAACTTCACCTTTCTAGGGACCTTAATCCTCCAAACCTAAGACAAGACCGACTCACTTTTCCTTAAAGCTTTTCATAACTAACCTTTGATTTTGTTCCCAGCCAATTGGATAACCTCTTTTCCTAATTCTCCCTTACCTCTTTGTACCTCTCTTTTTAACTCTTAAAACATACTGATACTACAAAAAACAATTAGAATGGTTTGAAATGGAAGCACTATCAAAGATTTTCTTTTCTTACTTCTCGCGGATGTCTTAAGTCAGCTCATTTTCAAGGGGGTGGAAGGAAATATCATTGAGCCCTTTAGGATTGGCGGGAATGCAGTGGTCTTATCGCACCTTCAGTTTGTGGATGATACAATATTATTTTGTAGAGAAGAGTCTTTCTTGATCCTTGGCCATATTGCTTCCTTCTTTGAAGATATGCCTTGGCTTATAATCAATAGGGACAAATGCACTATATTTGGAATTAATAGTGATCAGGACAAGCTTAAGAGGTGGACAGAGATGTTTGATTGCTAGATAGGCTCTTTTTCCTTCTCTTACCTTGGTCGAGAGGTTTTTGGGATATTGTTTGTGTAAAGAGCTGCAAGAGATGCTCTGTTCACAACTCCCCCCCGACCCTTTCGATTATTGTTCACCACTCCCCCTCTTCCCCCTCTCCCTTCGTTTTCCCATTATGAATCCTTTCGATCGCACTAGTTAACTTGCTTTTTTGTTGTAATTTGGCTGTTTGTACGGGTTTTGTTTTTTTTTGTTGTGCAATTTTAGGTTGTAGAAAGAAGAAAAAAGAATGTAGGAAATCTATAGAGGGGAAGATGACTTTGGCTTGTCTGGATACGTGTTGCTGGCGAAGCTTGATCGAGCAAGCTGCAAAATTGTATAGATGATGCTTTATTGTGTAACAAGAATGTAAGGTAAGAAAATAGTAGATTATAGTTTGATATTTTTGGTTAGAATGGCATAGCCAATACTTCACGTGTTGTATTAAAAGGGATTGTAAAGAAAAAAAAAGCCCAAAGAGGCGCTTTGCGGAAGGCATGCACCTTCCTCAATGCCTCTATCTAAGGCAAGGTGCCAATGTTGTGCCTTGGGCCTAGGTGTGTGCTCAAGTGTGCCTTTTAAAACGCTGCATGGTAGAGAGGGACCATAATGAGGTTTGGATTTGATAGATTTCATGTGTCATGGCTTTAGGTTTCGAAGGGAAGCATGTTTTGTAAAGCATTATTAATTAGCGGTACTTTTTATGAGGTGGAGTGCTTGGTTCTGGGTTTTTTTTAATTATCTATTGTTAAGGGGAGATTATTTTCGACGTTCTTTCTTCGAAATATTAAGTTGTTTCTATTAGATAGAGGTGAGTGGAAGAAAAATATTGAATGTAAAATAATAAAAAAGGATGGCAATAGAGAAATCCTCTCCTCAGGGATTCCACAATTAAGGAGAATTGTCAGATAAAACTCTTTACGCACTTCTTCTCAACCCACACCTTCTATTTATAGCAAAAAACCCTAACAAACTAACCATCTGATTACTATTTTCCCCTTCTACTAACCATACTAGTATTCTCCTAAGAATCCTAATATCTCATTACTAGAGATGGTCAGTGATCTAACATTCTATATTCTTGGTATGCAGGAAGCTGGAAGCATGTCTGATTATCATGAGAAATTTCCTATCGGAACAAAAGTTCAAGCTGTTTGGAGTGAGGACGGGGAGTGGTGAGTAAAACAAAAGGAGAAATTTATCATCTTACTTTCTAAAAAGGAAGTTTGTTCTCCAACTTATTCTCTTTTTAGTTAGAAAAGAGACGTTGAAGATGCGTGCTTAAAGTTTTCCAAGGACCCAAGTACGAAAATAATAAGTGTCTGCATGGAGGGGTTTTAAATTTTAAATCTATTTATTTATTTTTTAAAGATTTTTACCCTATCCAATATAAGAAGCTGCGACATTTCTATAAAGTTAGTTTTGCAAAATGGATGTTAATGAAGATCAGGTTATTGTTCTACTATAACAGCGGCTTGGCTATCTCAAAATTGGACGAATTTTGTAAATTTATATCTTTAATTTATCTTAAAGAGTAACCTTAGTGTCTTCCCAGAAAGAAAGAGGATGAAAAACCATGTTAAATTAAGAGTTTGGTTAAACCAATTTAATACTGCCACGGCTACTCCCCTTTGTGAGTATTATGAACCTAAACTCGTCTTCATCTCCCCCTCCAGTTCTCGCTAAGTCTTACTTTTTAGATTAGAGCCCTTTTGTGCATAGCTAGTTCTTGAGGTTACCTTTCTCAGGCTATTTTTTGTATGCCCCCTCTTGTTCTTTAAACAATTTAACCATTTTATTTTAAAAAGATTTTCTGTTCAGTTATCTTGTTTTGAGCATTTGAAATAGCATCTACACTTGGTCTCTTATCGAAGTGAATGATAAGTCTATCTTTGAAGCTGACTTTAGTTTCTAGGCTTCCAAGCATATACATCGATTTTGTTGATGTACGCATTTTTTACTTCTCTCAGCTCCAATATTTCCTGCCCCCTTTTGAAGCTTTTTTATTTCTCCCTTTTTGTTTAACTACTTTTCCTTCAACTATTTTTTAATAGAAACAGAAATTTTCCCTTGATTGCGTTCAATTGTTTGAATATTCAGGTACGATGCTACAATTGAAGCTCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTAAGGTTTCTACATCTGCTATTTGCAGGACTTTTGATTATTTTTAAGAGCGTTATCTTTTATCAGCAAAAAATGAGTATTAGTATTTCTTCAAAATGATCTGGGTCCGTCTCTCTAAATTAACTAGAAATGTGAGGAATGGATTCATGGTGAGTCTGTACGGGACGCATTTCCCTTTGGATGGGTGCAATCCATAGGCGTTAGGACTAAAAGCATATGTAAGAATTCTTGGAAGGCCATCTTGATTCTTGGTTGGTTTTAGTTCCTTTGTTTGTTGGATTAGCTGGTATAAATACCATGGTCTCTCATTGCAAGACTTGATTGAACATTAAATTCTTGCATTTTGGTTTACTCTGGTTTTCCTAGATAACTCAAAGGTATCTTGAACTCATTCTCTCAGACCCTCTCCTATTTATGTTACCCTAATAATTACTAGGCCAATAACTAATAAGGTATCCTTTCTTTTTTAAAAGAAAAAAATGCATACATTATCGATTGATACATGGGAGAAACAACTGCAAAATACAAGAAGAGTTAGCACGAGGGAGAGCGCAATGAAGTTTAGGAGTACAAATCATAATATATATATTTTTGAGGTTTAGGAGTTCTATATATAACTACACAAACATATGCATGTACTCACATACATATAGACATACCTGTTAAATGTAATTATTGTCCTTTTAACTAAAATTGGTTCAGTAGTGCACTAATTGTCAACACTTATGGTATCTACTAATTTTAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAGTGGCTGAAGCTACAAAGCAGGCTATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTTCAATCCCGAAATTTACCATCAAAACTTCGAATTGAACCTGATGATCCTGAGGATGTAGTAAGTAGTTGATAATTGTAATATTTTGTGGCAACTAATTTATTAGTCCAGTAATTAGTTTGTTATTTAAGACAAATGTAGTAGTACATTTGTTTTGTACCTGTGGTGCTTGAAATACAGATATATATAGACTGATGTTAATTTGTTTTGTATAGAAAGCCACCAAACGCAAGAAAATACATGCCTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGGAAATCTAAGAAGGTAAATGTTGTGAAATCTAGCATTTTGGTTTGTTTTATATTGAGGCCCAACAGGTATAAAAACCCCAAAGGCAAAAGGATGTTTTTGAAAAGTATTTCAATTGACATTAATCAAAACAGAATATTAATAGCTAGAATATTTTTCTTCCCAACAAGCATCCAATAAATCACATGGTGAACACTCTTGTGTTAATTCAGGGAAAAACAACAACTCATTACTAGCTATAGAAATAGAGCACCAGCACTTCACAGCACATTCTAGAGGGCTTAGTATCCTCTCTCATGAGCCAAACGCTCACCAAAGTCTCCAACACCACGCTCACCTACTTTCTATAACCCAAAGGATGTAGCGAACTTAATGTCTAATTAATATTTTCCCAACTGGGAGTCCTTTAGTCTGATGATGATTTATACATACAAATTTGCAGATTGGTTTCTTCTCTGGACGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGACCCGAATGGGAAGGTTGGTGTGACAGGAAGTGGAAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACCTGCATCTCAAGGGTGCAACGGTGGAGATGGATGAGTAAAAGTGAGATTAGAGTTTATAGGTTGGTGGTTTCTTTGTATGTATCTTCATTTAGTATCCACAATCCAGTTTATGCGATCTCTGTGGTTAGATTCATATAAACGTGCTGAAAGTTTAGGCGGGGGGATTCCCTCCAAGTAACATAGTGTTTTCTTATGAGAATGGTTACAAAGCCTACCATGACAGGGTCTCTCTTTTCCTTTGACATTTTTATGTTTACTTGTTCTATTACCTTATAGTTAATGGGATATGCACATTTACATGAAAAACCCAATCAATTGTGTTTAAATTTCCACTCCCACTCCCACCTTTCTTTAGAGATGATCCTAGGTTGTCTGAGGGAGCTTTGTAATGTCGCATTTATTGATGTTGTACGATAAGGGTATGACCGATGAACTTACCTGAACAAGACTTAGTTCCATGGATTCATTTGTGTTCTCGATTTCTAATAAACCAGGAGGCG

mRNA sequence

CGGGGGGAGTTAGCGTTTGTGTGTGCGTTCTTCACCATCCTCTGATTCTCCTAAAAACTTTTCCAATTTTGCGCTTTTTTTCCCCTTCTCCTCCTCCTCTGTTCATCCAATTCTACCAAAATAATGCAAGGAGGAGAAGATGTTAGCATTGAAGAGTTGGCTAATAATCTGTCTACCTACAAAGACCAGCTTCACCAGGTCAGACAGCTGTTAGATGATGATCCTGGCAACTCTGAATACATTGATATGGAAAAAGAGCTTGAAGAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGGTTTCTGGATCAAATGTAGAAACGGGTGATGACAGTGCATCAATTGGTTTCCAGCAGCCTAAAGAAAATGAAATGGAAGCTGGAAGCATGTCTGATTATCATGAGAAATTTCCTATCGGAACAAAAGTTCAAGCTGTTTGGAGTGAGGACGGGGAGTGGTACGATGCTACAATTGAAGCTCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAGTGGCTGAAGCTACAAAGCAGGCTATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTTCAATCCCGAAATTTACCATCAAAACTTCGAATTGAACCTGATGATCCTGAGGATGTAAAAGCCACCAAACGCAAGAAAATACATGCCTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGGAAATCTAAGAAGATTGGTTTCTTCTCTGGACGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGACCCGAATGGGAAGGTTGGTGTGACAGGAAGTGGAAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACCTGCATCTCAAGGGTGCAACGGTGGAGATGGATGAGTAAAAGTGAGATTAGAGTTTATAGGTTGGTGGTTTCTTTGTATGTATCTTCATTTAGTATCCACAATCCAGTTTATGCGATCTCTGTGGTTAGATTCATATAAACGTGCTGAAAGTTTAGGCGGGGGGATTCCCTCCAAGTAACATAGTGTTTTCTTATGAGAATGGTTACAAAGCCTACCATGACAGGGTCTCTCTTTTCCTTTGACATTTTTATGTTTACTTGTTCTATTACCTTATAGTTAATGGGATATGCACATTTACATGAAAAACCCAATCAATTGTGTTTAAATTTCCACTCCCACTCCCACCTTTCTTTAGAGATGATCCTAGGTTGTCTGAGGGAGCTTTGTAATGTCGCATTTATTGATGTTGTACGATAAGGGTATGACCGATGAACTTACCTGAACAAGACTTAGTTCCATGGATTCATTTGTGTTCTCGATTTCTAATAAACCAGGAGGCG

Coding sequence (CDS)

ATGCAAGGAGGAGAAGATGTTAGCATTGAAGAGTTGGCTAATAATCTGTCTACCTACAAAGACCAGCTTCACCAGGTCAGACAGCTGTTAGATGATGATCCTGGCAACTCTGAATACATTGATATGGAAAAAGAGCTTGAAGAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGGTTTCTGGATCAAATGTAGAAACGGGTGATGACAGTGCATCAATTGGTTTCCAGCAGCCTAAAGAAAATGAAATGGAAGCTGGAAGCATGTCTGATTATCATGAGAAATTTCCTATCGGAACAAAAGTTCAAGCTGTTTGGAGTGAGGACGGGGAGTGGTACGATGCTACAATTGAAGCTCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAGTGGCTGAAGCTACAAAGCAGGCTATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTTCAATCCCGAAATTTACCATCAAAACTTCGAATTGAACCTGATGATCCTGAGGATGTAAAAGCCACCAAACGCAAGAAAATACATGCCTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGGAAATCTAAGAAGATTGGTTTCTTCTCTGGACGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGACCCGAATGGGAAGGTTGGTGTGACAGGAAGTGGAAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACCTGCATCTCAAGGGTGCAACGGTGGAGATGGATGAGTAA

Protein sequence

MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE

Homology

[Close]

BLAST of Pay0001340 vs. ExPASy Swiss-Prot
Match: Q6DEY1 (Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=8364 GN=smndc1 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.1e-18
Identity = 90/285 (31.58%), Postives = 136/285 (47.72%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEVSGSN 69
           E+LA  L+ YK QL QV   L  +  N + + ++K+L+EVI LT++LLS+          
Sbjct: 3   EDLAKQLAGYKAQLQQVESALTANGENEDLLKLKKDLQEVIELTKDLLSSQPS------- 62

Query: 70  VETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
            ET DD+         ++   +GS S     + +G K  AVWS+DG+WY+A I E    N
Sbjct: 63  -ETADDAC--------DDMSASGSQS-----WKVGEKCMAVWSDDGQWYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N+R ++       E  +  E                   S 
Sbjct: 123 GTAAITFAGYGNAEVTSLLNLRPVE-------EGRKAKE------------------DSG 182

Query: 190 NLPSKLRIEPDDPEDVKATKR-KKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
           NLP   +      E + A +  KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 NLPMSKK------EMIAAQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNKAYSKNK 230

Query: 250 KIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
           K     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Pay0001340 vs. ExPASy Swiss-Prot
Match: O75940 (Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=SMNDC1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16
Identity = 90/284 (31.69%), Postives = 131/284 (46.13%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEVSGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST          
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPS------- 62

Query: 70  VETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
            ET   S S    QP  +             + +G K  AVWSEDG+ Y+A I E    N
Sbjct: 63  -ETLASSDSFASTQPTHS-------------WKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Pay0001340 vs. ExPASy Swiss-Prot
Match: Q5R591 (Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-16
Identity = 89/284 (31.34%), Postives = 131/284 (46.13%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEVSGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST          
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPS------- 62

Query: 70  VETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
            ET   S S    QP  +             + +G K  A+WSEDG+ Y+A I E    N
Sbjct: 63  -ETLASSDSFASTQPTHS-------------WKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Pay0001340 vs. ExPASy Swiss-Prot
Match: Q3T045 (Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.8e-16
Identity = 89/284 (31.34%), Postives = 134/284 (47.18%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEVSGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST     ++ S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS- 62

Query: 70  VETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
               D+ AS    QP  +             + +G K  A+WSEDG+ Y+A I E    N
Sbjct: 63  ----DNFAS---TQPTHS-------------WKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Pay0001340 vs. ExPASy Swiss-Prot
Match: Q4QQU6 (Survival of motor neuron-related-splicing factor 30 OS=Rattus norvegicus OX=10116 GN=Smndc1 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 89/284 (31.34%), Postives = 130/284 (45.77%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEVSGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST          
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPS------- 62

Query: 70  VETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
            ET   S S    QP  +             + +G K  AVWSEDG+ Y+A I E    N
Sbjct: 63  -ETLTSSDSFASTQPTHS-------------WKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++  +GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAVYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Pay0001340 vs. ExPASy TrEMBL
Match: A0A6J1K7R2 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 GN=LOC111493029 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.4e-154
Identity = 284/299 (94.98%), Postives = 293/299 (97.99%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGDDSASI FQQ K N+MEA SMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Pay0001340 vs. ExPASy TrEMBL
Match: A0A6J1EY48 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=3662 GN=LOC111439780 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.4e-154
Identity = 284/299 (94.98%), Postives = 293/299 (97.99%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGDDSASI FQQ K N+MEA SMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Pay0001340 vs. ExPASy TrEMBL
Match: A0A6J1DPE2 (survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=3673 GN=LOC111022290 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 277/299 (92.64%), Postives = 288/299 (96.32%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELA+NLSTYKDQL QVRQLLDDDP NSEYIDMEKELEEVI+LTEELL+TA
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGD+SASI F Q KE +MEA S+SD+HEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMD+
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of Pay0001340 vs. ExPASy TrEMBL
Match: A0A1S3CE07 (survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.3e-136
Identity = 255/257 (99.22%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 43  EKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFP 102
           +KELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFP
Sbjct: 13  KKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFP 72

Query: 103 IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 162
           IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE
Sbjct: 73  IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 132

Query: 163 RVAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 222
           R+AEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ
Sbjct: 133 RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 192

Query: 223 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 282
           LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ
Sbjct: 193 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 252

Query: 283 KREKHLHLKGATVEMDE 300
           KREKHLHLKGATVEMDE
Sbjct: 253 KREKHLHLKGATVEMDE 269

[Close]

BLAST of Pay0001340 vs. ExPASy TrEMBL
Match: A0A1S3CD96 (survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.8e-134
Identity = 250/252 (99.21%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 48  EVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKV 107
           +VIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKV
Sbjct: 23  QVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKV 82

Query: 108 QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEA 167
           QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEA
Sbjct: 83  QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 142

Query: 168 TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 227
           TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ
Sbjct: 143 TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 202

Query: 228 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 287
           NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH
Sbjct: 203 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 262

Query: 288 LHLKGATVEMDE 300
           LHLKGATVEMDE
Sbjct: 263 LHLKGATVEMDE 274

[Close]

BLAST of Pay0001340 vs. NCBI nr
Match: XP_004142808.1 (survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus] >KGN51867.2 hypothetical protein Csa_008126 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 2.7e-160
Identity = 296/299 (99.00%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEVSGSNVETGDDSASIGFQQ KENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEVSGSNVETGDDSASIGFQQSKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN LLEAERVAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNPLLEAERVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQ+A
Sbjct: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQTA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of Pay0001340 vs. NCBI nr
Match: XP_038876515.1 (survival of motor neuron-related-splicing factor 30 [Benincasa hispida])

HSP 1 Score: 568.5 bits (1464), Expect = 3.3e-158
Identity = 292/299 (97.66%), Postives = 294/299 (98.33%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELANNLSTYKDQL QVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+ GSNVETGDDSASI F QPKENEMEAGSMSDYHEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEIPGSNVETGDDSASISFHQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVR IQLEVNALLEAERVAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRAIQLEVNALLEAERVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of Pay0001340 vs. NCBI nr
Match: XP_022933076.1 (survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022998367.1 survival of motor neuron-related-splicing factor 30 [Cucurbita maxima] >XP_023530530.1 survival of motor neuron-related-splicing factor 30 [Cucurbita pepo subsp. pepo] >KAG6601669.1 Survival of motor neuron-related-splicing factor 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 554.7 bits (1428), Expect = 4.9e-154
Identity = 284/299 (94.98%), Postives = 293/299 (97.99%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGDDSASI FQQ K N+MEA SMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Pay0001340 vs. NCBI nr
Match: KAG7032438.1 (Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 539.3 bits (1388), Expect = 2.1e-149
Identity = 283/323 (87.62%), Postives = 292/323 (90.40%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEE------------ 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVVYFCPPRYILT 60

Query: 61  ------------VIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSD 120
                       VIALTEELLSTAKQNE+SGSNVETGDDSASI FQQ K N+MEA SM D
Sbjct: 61  ATWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMCD 120

Query: 121 YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 180
           YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN
Sbjct: 121 YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 180

Query: 181 ALLEAERVAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKS 240
           ALLEAER+AEATKQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKS
Sbjct: 181 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKS 240

Query: 241 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGK 300
           KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGK
Sbjct: 241 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGK 300

[Close]

BLAST of Pay0001340 vs. NCBI nr
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia])

HSP 1 Score: 538.9 bits (1387), Expect = 2.8e-149
Identity = 277/299 (92.64%), Postives = 288/299 (96.32%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELA+NLSTYKDQL QVRQLLDDDP NSEYIDMEKELEEVI+LTEELL+TA
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGD+SASI F Q KE +MEA S+SD+HEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMD+
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of Pay0001340 vs. TAIR 10
Match: AT2G02570.1 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.4 bits (973), Expect = 2.7e-105
Identity = 200/296 (67.57%), Postives = 245/296 (82.77%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEVSGSNVETGDDSASIGFQQPKENEMEAGSMSD-YHE-KFPIGTKVQAVWSEDGEWYDA 122
           NE+S S+     + A+ G    +    + G  +D  HE KFP+GTKVQAV+S+DGEWYDA
Sbjct: 64  NEISLSDAGVSAE-ATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYDA 123

Query: 123 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 182
           TIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +AA
Sbjct: 124 TIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKAA 183

Query: 183 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 242
           S D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+ 
Sbjct: 184 SSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQTT 243

Query: 243 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
           K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 KAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 296

[Close]

BLAST of Pay0001340 vs. TAIR 10
Match: AT2G02570.2 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.4 bits (973), Expect = 2.7e-105
Identity = 200/296 (67.57%), Postives = 245/296 (82.77%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEVSGSNVETGDDSASIGFQQPKENEMEAGSMSD-YHE-KFPIGTKVQAVWSEDGEWYDA 122
           NE+S S+     + A+ G    +    + G  +D  HE KFP+GTKVQAV+S+DGEWYDA
Sbjct: 64  NEISLSDAGVSAE-ATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYDA 123

Query: 123 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 182
           TIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +AA
Sbjct: 124 TIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKAA 183

Query: 183 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 242
           S D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+ 
Sbjct: 184 SSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQTT 243

Query: 243 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
           K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 KAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 296

[Close]

BLAST of Pay0001340 vs. TAIR 10
Match: AT2G02570.4 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.4 bits (973), Expect = 2.7e-105
Identity = 200/296 (67.57%), Postives = 245/296 (82.77%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEVSGSNVETGDDSASIGFQQPKENEMEAGSMSD-YHE-KFPIGTKVQAVWSEDGEWYDA 122
           NE+S S+     + A+ G    +    + G  +D  HE KFP+GTKVQAV+S+DGEWYDA
Sbjct: 64  NEISLSDAGVSAE-ATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYDA 123

Query: 123 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 182
           TIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +AA
Sbjct: 124 TIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKAA 183

Query: 183 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 242
           S D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+ 
Sbjct: 184 SSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQTT 243

Query: 243 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
           K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 KAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 296

[Close]

BLAST of Pay0001340 vs. TAIR 10
Match: AT2G02570.3 (nucleic acid binding;RNA binding )

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-97
Identity = 190/296 (64.19%), Postives = 235/296 (79.39%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEVSGSNVETGDDSASIGFQQPKENEMEAGSMSD-YHE-KFPIGTKVQAVWSEDGEWYDA 122
           NE+S S+     + A+ G    +    + G  +D  HE KFP+GTKVQAV+S+DGEWYDA
Sbjct: 64  NEISLSDAGVSAE-ATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYDA 123

Query: 123 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 182
           TIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +AA
Sbjct: 124 TIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKAA 183

Query: 183 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 242
           S D+Q++ LP+KL+I+P+DPEDVK  KRKKIH            V QNK+QN WQQFQ+ 
Sbjct: 184 SSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIH------------VVQNKKQNDWQQFQTT 243

Query: 243 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
           K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 KAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 284

The following BLAST results are available for this feature:

BLAST of Pay0001340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DEY1	3.1e-18	31.58	Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=836...	[more]
O75940	1.7e-16	31.69	Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=S...	[more]
Q5R591	2.2e-16	31.34	Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=S...	[more]
Q3T045	3.8e-16	31.34	Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMN...	[more]
Q4QQU6	1.5e-15	31.34	Survival of motor neuron-related-splicing factor 30 OS=Rattus norvegicus OX=1011...	[more]

BLAST of Pay0001340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7R2	2.4e-154	94.98	survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EY48	2.4e-154	94.98	survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=366...	[more]
A0A6J1DPE2	1.4e-149	92.64	survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=36...	[more]
A0A1S3CE07	1.3e-136	99.22	survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo O...	[more]
A0A1S3CD96	2.8e-134	99.21	survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo O...	[more]

BLAST of Pay0001340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142808.1	2.7e-160	99.00	survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus]...	[more]
XP_038876515.1	3.3e-158	97.66	survival of motor neuron-related-splicing factor 30 [Benincasa hispida]	[more]
XP_022933076.1	4.9e-154	94.98	survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022...	[more]
KAG7032438.1	2.1e-149	87.62	Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subs...	[more]
XP_022155149.1	2.8e-149	92.64	survival of motor neuron-related-splicing factor 30 [Momordica charantia]	[more]

BLAST of Pay0001340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02570.1	2.7e-105	67.57	nucleic acid binding;RNA binding	[more]
AT2G02570.2	2.7e-105	67.57	nucleic acid binding;RNA binding	[more]
AT2G02570.4	2.7e-105	67.57	nucleic acid binding;RNA binding	[more]
AT2G02570.3	2.0e-97	64.19	nucleic acid binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	GENE3D	2.30.30.140		coord: 96..152 e-value: 5.8E-11 score: 44.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..276
None	No IPR available	PANTHER	PTHR13681:SF32	BNAA06G34090D PROTEIN	coord: 1..292
None	No IPR available	PANTHER	PTHR13681	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	coord: 1..292
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 100..151
IPR002999	Tudor domain	SMART	SM00333	TUDOR_7	coord: 99..156 e-value: 1.7E-11 score: 54.2
IPR002999	Tudor domain	PROSITE	PS50304	TUDOR	coord: 100..158 score: 13.444279
IPR002999	Tudor domain	CDD	cd04508	TUDOR	coord: 104..149 e-value: 9.30718E-11 score: 54.1411
IPR010304	Survival motor neuron	PFAM	PF06003	SMN	coord: 70..156 e-value: 1.9E-6 score: 27.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001340.1	Pay0001340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding