Pay0001331 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001331
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr06: 24252837 .. 24253400 (-)
RNA-Seq Expression	Pay0001331
Synteny	Pay0001331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATTGATTTCCCGGATGATAACATATTTCTAGTTGAAAAGAATGCTAGAGATCATGAGACATAGACTATGCTTTTCGATGGTGCCTCAAATGAGTTGAGACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGGCCAAGTTATGTTTTGAATGCACTCACAATATCGCTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGTGATATGAGTATTAAAAAGTTGAAAGTTTTGGGTGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGACATGCTAAATTGGTACCTTACAGCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGGCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATAA

mRNA sequence

ATGAGGATTGATTTCCCGGATGATAACATATTTCTAGTTGAAAAGAATTTGAGACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGGCCAAGTTATGTTTTGAATGCACTCACAATATCGCTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGTGATATGAGTATTAAAAAGTTGAAAGTTTTGGGTGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGACATGCTAAATTGGTACCTTACAGCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGGCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATAA

Coding sequence (CDS)

ATGAGGATTGATTTCCCGGATGATAACATATTTCTAGTTGAAAAGAATTTGAGACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGGCCAAGTTATGTTTTGAATGCACTCACAATATCGCTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGTGATATGAGTATTAAAAAGTTGAAAGTTTTGGGTGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGACATGCTAAATTGGTACCTTACAGCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGGCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATAA

Protein sequence

MRIDFPDDNIFLVEKNLRHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQ

Homology

[Close]

BLAST of Pay0001331 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 44  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 103
           T+N+AEY   I GL  A  +   +  VL DS LV+ Q+   W+ +H  L+        L+
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 104 QNFEKISFDHVPREDNRMADALATLAV 131
             F +I+++ VPR  N  AD LA  A+
Sbjct: 104 SQFRRINYEWVPRARNTYADRLANDAM 130

[Close]

BLAST of Pay0001331 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 44  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 103
           T+N+AEY   I GL  A  +   +  VL DS LV+ Q+   W+ +H  L+        L+
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 104 QNFEKISFDHVPREDNRMADALATLAV 131
             F +I+++ VPR  N  AD LA  A+
Sbjct: 104 SQFRRINYEWVPRARNTYADRLANDAM 130

[Close]

BLAST of Pay0001331 vs. ExPASy Swiss-Prot
Match: P64956 (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 44  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 103
           T+N+AEY   I GL  A  +   +  VL DS LV+ Q+   W+ +H  L+        L+
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 104 QNFEKISFDHVPREDNRMADALATLAV 131
             F +I+++ VPR  N  AD LA  A+
Sbjct: 104 SQFRRINYEWVPRARNTYADRLANDAM 130

[Close]

BLAST of Pay0001331 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.2e-91
Identity = 167/187 (89.30%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1    MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
            MRIDFPDDNIFLVEKN R                 HGIGVVLISPEGKVFPLTAKLCFEC
Sbjct: 1216 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 1275

Query: 61   THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
            THNIAEYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS
Sbjct: 1276 THNIAEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1335

Query: 121  QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
            QNFEKISFDHVPREDNRMADALATLA+MFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 1336 QNFEKISFDHVPREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1395

[Close]

BLAST of Pay0001331 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.1e-91
Identity = 168/187 (89.84%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1    MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
            MRIDFPDDNIFLVEKN R                 H IGVVLISPEGKVFPLTAKLCFEC
Sbjct: 1344 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFEC 1403

Query: 61   THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
            THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS
Sbjct: 1404 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1463

Query: 121  QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
            QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 1464 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1523

[Close]

BLAST of Pay0001331 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 168/187 (89.84%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
           MRIDFPDDNIFLVEKN R                 HGIGVVLISPEGKVFPLTAKLCFEC
Sbjct: 375 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 434

Query: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
           THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLS
Sbjct: 435 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 494

Query: 121 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
           QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 495 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 554

[Close]

BLAST of Pay0001331 vs. ExPASy TrEMBL
Match: A0A5A7UQ60 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00930 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.4e-88
Identity = 163/187 (87.17%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
           MRIDFP++NIFLVEKN R                 HGIGVVLISPEGKVFPLTAKLCFEC
Sbjct: 1   MRIDFPNENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 60

Query: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
           THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLS
Sbjct: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 120

Query: 121 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
           QNFEKI FDHVPRE+N+MADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 121 QNFEKILFDHVPRENNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 180

[Close]

BLAST of Pay0001331 vs. ExPASy TrEMBL
Match: A0A5A7T3U9 (Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003720 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.1e-87
Identity = 161/187 (86.10%), Postives = 165/187 (88.24%), Query Frame = 0


Query: 1   MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
           MRIDFPD+NIFLV+KN R                 HGIGVVLISPEG VFPLTAKLCFEC
Sbjct: 438 MRIDFPDENIFLVKKNARDYETWTMLFDGASNELGHGIGVVLISPEGNVFPLTAKLCFEC 497

Query: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
           THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEW+TR AKL PYSQYVTKLS
Sbjct: 498 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWKTRDAKLEPYSQYVTKLS 557

Query: 121 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
           QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITK+DVPAYCMNVGNDN P
Sbjct: 558 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKQDVPAYCMNVGNDNTP 617

[Close]

BLAST of Pay0001331 vs. NCBI nr
Match: KAA0046213.1 (uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 167/187 (89.30%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1    MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
            MRIDFPDDNIFLVEKN R                 HGIGVVLISPEGKVFPLTAKLCFEC
Sbjct: 1216 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 1275

Query: 61   THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
            THNIAEYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS
Sbjct: 1276 THNIAEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1335

Query: 121  QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
            QNFEKISFDHVPREDNRMADALATLA+MFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 1336 QNFEKISFDHVPREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1395

[Close]

BLAST of Pay0001331 vs. NCBI nr
Match: KAA0037621.1 (uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa])

HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90
Identity = 168/187 (89.84%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1    MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
            MRIDFPDDNIFLVEKN R                 H IGVVLISPEGKVFPLTAKLCFEC
Sbjct: 1344 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFEC 1403

Query: 61   THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
            THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS
Sbjct: 1404 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1463

Query: 121  QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
            QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 1464 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1523

[Close]

BLAST of Pay0001331 vs. NCBI nr
Match: TYK24459.1 (uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 342.4 bits (877), Expect = 2.2e-90
Identity = 168/187 (89.84%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
           MRIDFPDDNIFLVEKN R                 HGIGVVLISPEGKVFPLTAKLCFEC
Sbjct: 375 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 434

Query: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
           THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLS
Sbjct: 435 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 494

Query: 121 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
           QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 495 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 554

[Close]

BLAST of Pay0001331 vs. NCBI nr
Match: KAA0055609.1 (uncharacterized protein E6C27_scaffold222G00930 [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 163/187 (87.17%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
           MRIDFP++NIFLVEKN R                 HGIGVVLISPEGKVFPLTAKLCFEC
Sbjct: 1   MRIDFPNENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 60

Query: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
           THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLS
Sbjct: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 120

Query: 121 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
           QNFEKI FDHVPRE+N+MADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP
Sbjct: 121 QNFEKILFDHVPRENNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 180

[Close]

BLAST of Pay0001331 vs. NCBI nr
Match: KAA0038144.1 (protein NYNRIN-like [Cucumis melo var. makuwa])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 161/187 (86.10%), Postives = 165/187 (88.24%), Query Frame = 0


Query: 1   MRIDFPDDNIFLVEKNLR-----------------HGIGVVLISPEGKVFPLTAKLCFEC 60
           MRIDFPD+NIFLV+KN R                 HGIGVVLISPEG VFPLTAKLCFEC
Sbjct: 438 MRIDFPDENIFLVKKNARDYETWTMLFDGASNELGHGIGVVLISPEGNVFPLTAKLCFEC 497

Query: 61  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 120
           THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEW+TR AKL PYSQYVTKLS
Sbjct: 498 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWKTRDAKLEPYSQYVTKLS 557

Query: 121 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 171
           QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITK+DVPAYCMNVGNDN P
Sbjct: 558 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKQDVPAYCMNVGNDNTP 617

[Close]

BLAST of Pay0001331 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-14
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 20  GIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIH 79
           G G VL + +  V     +     T+N+AEY A ++GL+ A D   K + VLGDSMLV  
Sbjct: 171 GAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCM 230

Query: 80  QVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLAV 131
           QV+  W+T H K+    +   +L  +F+     H+ RE N  AD  A  A+
Sbjct: 231 QVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAI 281

[Close]

BLAST of Pay0001331 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-14
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 20  GIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIH 79
           G G VL + +  V     +     T+N+AEY A ++GL+ A D   K + VLGDSMLV  
Sbjct: 171 GAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCM 230

Query: 80  QVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLAV 131
           QV+  W+T H K+    +   +L  +F+     H+ RE N  AD  A  A+
Sbjct: 231 QVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAI 281

[Close]

BLAST of Pay0001331 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-10
Identity = 38/111 (34.23%), Postives = 51/111 (45.95%), Query Frame = 0


Query: 20  GIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIH 79
           G   VL + +G +     +     T+N AEY A I+GL+ A +   K +KV GDS LV  
Sbjct: 233 GAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCM 292

Query: 80  QVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLAV 131
           Q+K +W+  H  L    +    L          HV R  N  AD  A LAV
Sbjct: 293 QIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAV 343

[Close]

BLAST of Pay0001331 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 55.1 bits (131), Expect = 6.5e-08
Identity = 35/110 (31.82%), Postives = 50/110 (45.45%), Query Frame = 0


Query: 20  GIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIH 79
           G   VL + +G +     +     T+N AEY   I+GL+ A +    K+KV  DS LV  
Sbjct: 202 GAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCM 261

Query: 80  QVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLA 130
           Q+K +W+  H  L    +   +LS         HV R  N  AD  A +A
Sbjct: 262 QMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQANMA 311

[Close]

BLAST of Pay0001331 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 55.1 bits (131), Expect = 6.5e-08
Identity = 35/110 (31.82%), Postives = 50/110 (45.45%), Query Frame = 0


Query: 20  GIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIH 79
           G   VL + +G +     +     T+N AEY   I+GL+ A +    K+KV  DS LV  
Sbjct: 202 GAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCM 261

Query: 80  QVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLA 130
           Q+K +W+  H  L    +   +LS         HV R  N  AD  A +A
Sbjct: 262 QMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQANMA 311

The following BLAST results are available for this feature:

BLAST of Pay0001331 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P9WLH5	2.8e-08	35.63	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	2.8e-08	35.63	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
P64956	2.8e-08	35.63	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]

BLAST of Pay0001331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRL7	6.2e-91	89.30	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010...	[more]
A0A5A7T7R4	8.1e-91	89.84	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282...	[more]
A0A5D3DMD2	1.1e-90	89.84	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160...	[more]
A0A5A7UQ60	6.4e-88	87.17	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00930...	[more]
A0A5A7T3U9	7.1e-87	86.10	Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G0...	[more]

BLAST of Pay0001331 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046213.1	1.3e-90	89.30	uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]	[more]
KAA0037621.1	1.7e-90	89.84	uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]	[more]
TYK24459.1	2.2e-90	89.84	uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa]	[more]
KAA0055609.1	1.3e-87	87.17	uncharacterized protein E6C27_scaffold222G00930 [Cucumis melo var. makuwa]	[more]
KAA0038144.1	1.5e-86	86.10	protein NYNRIN-like [Cucumis melo var. makuwa]	[more]

BLAST of Pay0001331 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01410.1	1.6e-14	36.04	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	1.6e-14	36.04	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	3.1e-10	34.23	RNase H family protein	[more]
AT5G51080.1	6.5e-08	31.82	RNase H family protein	[more]
AT5G51080.2	6.5e-08	31.82	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 18..129 e-value: 2.0E-24 score: 85.8
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 1..131 score: 10.220834
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 13..137 e-value: 9.6E-32 score: 111.8
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 19..145
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 19..145
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 20..129 e-value: 4.41957E-46 score: 145.308
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 18..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001331.1	Pay0001331.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding