Pay0001290 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001290
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	sec-independent protein translocase protein TATA, chloroplastic
Location	chr02: 1200234 .. 1205613 (+)
RNA-Seq Expression	Pay0001290
Synteny	Pay0001290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGATTGATACAAAAAATTTCAAAGCCCCCAAATAAAATTAATCAAAATGAGATGAGAAGCATTCCCTAAACCGATAAAGATTCCCAAATTTCCAATCAAAGATTTTTCTCCTCAACGACGAAGGCGACCATGGTGATTTCAACTCCAACTCTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCTCCTTCATTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCGTCAGTTTCTTCACCAACGGTGACCATAACCATTCTTCGGTACTGCGTTTGACCAGCTTCAGAACTACCACCAAAACAACTCATAAGGGTCTCACTTGTAATGCTTTGTTTGGTCTTGGAGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGGCCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTCCAACAGGTATGTTTGTGGTTTTAGTTGATTGGGTCAGATTGGATGCTCTGGAATTGTGTAATTGTTTGGGATTTGAAATGGGGATTCGGGGAAATGAAGTTTTTTTTTTAACTGAATTTGGATTGTGTGCGCGATGTTTGAGTTTCACTTGGCTTGTCCACTAATACAGAAAAGTAATTGATAATTGTTGTTTTGGGTTTATTTTGACTAACTAGTTAGCAAAATTAACCCTTCTTTTCGTGGCTACACGAGAAGCAACAATCTTGAATTAGTTGAATTGTCGATTTATTAGCTTTGTCCAAAGTATTACTGAAAGTATTCCCTAAGATTGAGCTGTCTATGAATTTATTTTTCTGGCTGGGCGACTGTGTGGGAGAATGAGCTTTATTAAAGTTCAAATTTTAGAATTTTACGTCATTCTAATATGTAAAATCTTCCAGCCTTGCGAGTTCTGTTCTTTGTCCTTGATCCTTTGTTGTAGTTTTCTTCAACTAATGCATTCTGAAAGTACTTTTGTTAATTGAAGTTTTGCGAAGTTTTGGATGTTTTGCTTTTGGATCATGAATAATCCGATCTAGTCATCAGTCATGTTAGACTAAATGGTATATGTAATATTTCCAGGATCCTTACTGGACATCTCTCTGTTGAATATTGTTTCTTATGTTTTTACGAATGCTTTTCAATTCATTTATTCTTAGTAGGTGGTGTTTTTAATGGACGTGAAATCTTGTTTCCTTTTCCTTTGTCTTTAAACTACGCGGGAGTCTTTTGCTGATATTTCCAGAGTGGAAAAATGGTATATGCATTCTCCAATTAAGAAACGTCAACAAACTCTTAATCTTGAGAAAATTCCTTTTCTACCTTCACCCTTTCTTTAGTATTGCAAATGGCAGTAGAGATCTTCATAGGGCGGGGCCCCATCCCTGTCCTCAGGGAATAGATGCCTTGGATGGAATGCCCCCAAGTCATGATCGTAGTCCCTGCGTCTTCTCATTAATGTCGTTCGAGGGCTTCTCTCTCCAAACTTAGAACTGTAAAGTCAAGCCTATTCTTCTCCGTCGGCTTGTTCATGACAAAATATCTCTTTACTTGATGTAGCTACCTGATGGGTAATGGGTCTTCTCGTCTTCCCCCTCAAAGATTAGTACCTCAGGTTTCCTCAATTGTATATTGAATAACAGCACCTCACAACTGCTAGGAGCGTTCTCTGTTTCATTGGTATGCCTTTTCTCTTTAGTTGCACTTTTAGCCGGTCGTTTGCCTCTATTCGTGTGTGTCTGTTCAAGGGAGCCTGAACTACCTGCATCTCTGGTTTCCCCCTTCCTTCTAGGCTACGCCTTTTATCTTCACATTATTTACTGTTCCAATCTCTAGCCTAACTCTTCCTGGATTCGGGTGAATTCATTTGCTATCGTGGCTTCTACTCCAGGTTCGATTTGGATAAACTTTTGATCCATCTTTTGAATCTTCGGAATATACCTAGGCCTGGTAGTATGTGTGGTACTTACTACATGAACATTAACGTTCTTTGATTATGCTGTTGTTATGGTATGATTTCCCATCGTATTCAATACAATTTAAAATCTTCGTTAATTTCCATTTTCTTTGATGAGAAATCAAGCTGGATGAAAATATGAAAAAAAATACTGAAAAAGAGAAAAGAAATGGAGTACATAAAAAAGACAACGCAACTAACAAAAGAGGAGCATCAAATCTAGAGTATATAGAATGGGCTTGAGCCCGACTAAAGGTTATTGTGAATTTCATTAATTCATCTATGTTTAGGAATGACAAACTTTTTTATCTTTCTAATTGAACAGTGTTTGGGGCCTTGGGGTAAGAGATTTGAACTTCTGATCTCTCAATCAAGTGTAAATATCTAAACTAGTTGATAAGTTGGCGACGGCCACTTTTGTCATAGAAAAAATACCTCCTACGTAATAGTATCATGCTTGGGAGCATGTAAAAATGTTCTTAGAAAAAAGCAAAGCACCTTGAAGTAGGTTGTTATAGAGTGTGTTTAGTCTAAACGGCTGAATGCAAAGTACTTTTAAGAATGTAGAACTAAACATTTAACTGATTTCTTTTAAACAATTTTAAAGTAATGTAGCTAAAACTACTTTAAAAGCACTCTGAAACATAAATTGAGAGTCTAAGACCGTCACATTTGTTAGTGTTGAGTTAGAGAAAGTTATTGTGGAATGAGGATACAGTAATCTTCAGTTCATACTTCATAGTTCGTTGTAGATGATTAATTAATGTATGGGTCTATTTCTAAGAAATCAACAACTCCGTCAATTATACACCCTTAAAACAGCTACCTAGTATTTTGTTGATGAAGCATGTTTTCTGTCTTTTTTCATCAATAGAGTCAAGTATTAGGAAAACTTCAATTGCTCAATTTGTTAGAAAAATCAGCAAAACGACGCTTCAATATTTCAACTTTGGTAGTTGGAGGAATAATGTTGCTAATATTATTGCAGGCAGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACCGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGAAGAGACAAGATTTGAAGGTATCAAACCAAAAAGAGACTGTATGAAGCGGTAGGTAGTCCATCATTTCCACATCTACATTTATCATTGTGTTTTATGTATTATGAGAATCAGTTACTGGAATCTGAAGATCACTTAATGAAGAAAATTAGTTTTCCAGTGCTGGACTCTGATGGATACCATAATCCACTCTAATTAGATCAAAAGGAAATATAAGCTATAACCTCAACTAGGCCGATCTGAGAGGGCAACTTCTCTCCCTACCAACAACATAATATCTGAACTTCCCTTTACAACATCCTTTTTACCCTTCATTTTTCTCTTTTTCACGACCGATGCAAATTTCATTTTTCATTACTGCACGTTCTAATATATTACATAGGATACTATCAACAGAGAATTTATATGCTTGTTGAATACTTGAATTCAAAACTCTTCCTCTCTGGTTATTAGCTTTTAGAATTTTCATGCCAAGTCTGAATTCTGCTATCTCTGAGCTATCCTTTTTTGGATGGTGGAGATTATTTGGTTATTGATTTGAATTCCTGACTTGGTTGAAGATTTGGAAAATACCAATTTCATTTCAAAGTTGAAAGCTGTGAGGCACATTTGTTTTGATTTAAACTGTTGCCTGATTTTATGGGCTTATGATAATAGGTCCATCGATTCATGATTGTGACAAATCCTTCTTTTATGCTTTCAGTTTTATAATAATGAACTTTTCTTAACCTCCAATTACAAGTACTCATTTGAAATTATTATTGGTTGGGCAAAGAATTTGGTCCAAAGTTTGTTGATGATTGTGGTCTTCCTAGGTGGCCCACTAGTTTGAACCATCCTATGTGTAGCTTGGCATAAATATCCTTGCACTCTTCTTTAAGTCTTTCATTTCATATAATAAAAACAATGGGTGAGTTGGGAAAGAGTAAGTTAGATTAAACTGAACTTTCACTAACTTATTGTAATATGCTCATGTTGATGTAGGCTTGTGTTGATGGTTTTTTTCATTCTTTTAATTGATTTGAACTTCTAACCCGTGGGAGGTAGATACATTAATTACTGTTGAGTTATGTTCATTATAACTCGAAAGAGTAATTGGATTATACGACATTACTTGTTATTAGACTAAAACTATATTTCCATTTAGTTATCGACCACCAGGGTAACACATTTGCATCTTGCTCATTTTGAACATGGAGTCGATTTGTAGAGGTTATAGTATGCAGTACTAATAATATGTCAATTGTTATTGAGTTATGCTCATTTTGATTCTAGACGGTAAATATATTGCATAACATTATTTGTTATGGGACAAAAGCTATTTTCGACCGAGTCAGTGGTCGCCATGGTAGTTAACTCCATCTTACTCGATTTGACCATGGAGTCCATCTGTAGTGGTTATAGTATATAGTAGTAATAATACATATGGATATAATTTAGAGAATTGACAAGGATTGTTACGTTCCTTGAACATTTCTATGTATTCATGAGTATTAAAAGATAAAAGATCTTTCATAGATTTTGTTAAGAATCTACGTAAAGGTCCCTCAATGAATCTTTTCTTTAGAGAAGACATGGTGAGTAATGCTATTTTTTTCCTTTAAAAAAAAGAAAATAATTTAATCCCAGATAGTAACTATTTTGTTTTTTGTTATTATTTTTTAAAATTAAACTTATAGACATTGTTCACACTTTCAAATTTCTTCTTTTGCTATCCACCTTTAACCTATGGATGCAAACCCGCATTTGGAAACTAAAAAATGTAACTTTTAAAAGCTTGTTTTTGTTTTTTGAAATTTGATTAAGAATTTAACCTTTATACTTCAAGAAAGATGCAAATTATCGTAAAAAATGAGTAGGAAATAGATTTAGATTTTCAAAATAAAAAACAAAAAATGAAATGATTAACAAACTAAACCTTAACTATTAGAGTTTGTGAGTATATATATAGAATGAAATGTTTGAGTTCGATTTCTGAAAATTTAAGAAAGACCTTTTGGTTTCTAAAATTTGAAACATGATTACAAATGATCATTCGCAATGCTAATGAGTGTCGTATGTATATAGGATTGGGACAAATAACGTGGCACCCTCCTTTGCTCCTCTCGTCTTCCCCTCTATCGTTGCCCAAAGCTTGTCGATGTTCATCAATTGTTGCATGAGTTGATGGCTAAAGAAAAGCAGACCTTTTGAAAAAAAAATAGACTTGCATTGGCCAAGGTCGGAGACCAAACCAGAAATTTGGTTCATTTTCCCCTTAGAAATGGTAGGTTATATTCGATCCATTTGGAAACAACTTTATGTGTACATTCAAGATAAACCAACAAAACTCATACCTG

mRNA sequence

GAAAAAGATTGATACAAAAAATTTCAAAGCCCCCAAATAAAATTAATCAAAATGAGATGAGAAGCATTCCCTAAACCGATAAAGATTCCCAAATTTCCAATCAAAGATTTTTCTCCTCAACGACGAAGGCGACCATGGTGATTTCAACTCCAACTCTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCTCCTTCATTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCGTCAGTTTCTTCACCAACGGTGACCATAACCATTCTTCGGTACTGCGTTTGACCAGCTTCAGAACTACCACCAAAACAACTCATAAGGGTCTCACTTGTAATGCTTTGTTTGGTCTTGGAGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGGCCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTCCAACAGGCAGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACCGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGAAGAGACAAGATTTGAAGGTATCAAACCAAAAAGAGACTGTATGAAGCGGATTGGGACAAATAACGTGGCACCCTCCTTTGCTCCTCTCGTCTTCCCCTCTATCGTTGCCCAAAGCTTGTCGATGTTCATCAATTGTTGCATGAGTTGATGGCTAAAGAAAAGCAGACCTTTTGAAAAAAAAATAGACTTGCATTGGCCAAGGTCGGAGACCAAACCAGAAATTTGGTTCATTTTCCCCTTAGAAATGGTAGGTTATATTCGATCCATTTGGAAACAACTTTATGTGTACATTCAAGATAAACCAACAAAACTCATACCTG

Coding sequence (CDS)

ATGGTGATTTCAACTCCAACTCTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCTCCTTCATTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCGTCAGTTTCTTCACCAACGGTGACCATAACCATTCTTCGGTACTGCGTTTGACCAGCTTCAGAACTACCACCAAAACAACTCATAAGGGTCTCACTTGTAATGCTTTGTTTGGTCTTGGAGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGGCCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTCCAACAGGCAGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACCGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGAAGAGACAAGATTTGAAGGTATCAAACCAAAAAGAGACTGTATGA

Protein sequence

MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRTTTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV

Homology

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BLAST of Pay0001290 vs. ExPASy Swiss-Prot
Match: Q9XH46 (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum OX=3888 GN=TATA PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.9e-28
Identity = 89/152 (58.55%), Postives = 107/152 (70.39%), Query Frame = 0


Query: 7   TLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRTTTKTTH 66
           TLS +SS   +P  L  S   S  +F ++N           +++S L L   R  T+TT 
Sbjct: 4   TLSISSS-SVIPTRLPNSSCYSNLSFLSSN-----------SNTSSLLLKKARIKTRTT- 63

Query: 67  KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 126
           KG TCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFE+ELKKE
Sbjct: 64  KGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKE 123

Query: 127 PEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           P PTEE SV    ++E EK Q++KVS+ K+ V
Sbjct: 124 PNPTEEISV----ASEQEK-QEIKVSSTKDNV 137

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BLAST of Pay0001290 vs. ExPASy Swiss-Prot
Match: Q9LKU2 (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATA PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.7e-27
Identity = 81/141 (57.45%), Postives = 96/141 (68.09%), Query Frame = 0


Query: 18  PPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRTTTKTTHKGLTCNALFGL 77
           PP   P  SSS+S+FF+N  TV+   N     +  L     R   + T K LTCNALFGL
Sbjct: 12  PPVSLPLLSSSRSSFFSNCFTVTTRPN-----TRSLVAIGRRIRQEPTRKPLTCNALFGL 71

Query: 78  GVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEK 137
           GVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKEFESELK EPE +   S + 
Sbjct: 72  GVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQV 131

Query: 138 PTSTEAEKRQDLKVSNQKETV 159
            TS + E+++    S+ KE V
Sbjct: 132 ATSNKEEEKKTEVSSSSKENV 147

[Close]

BLAST of Pay0001290 vs. ExPASy Swiss-Prot
Match: Q9XFJ8 (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4577 GN=TATA PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20
Identity = 58/90 (64.44%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 69  LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP- 128
           L C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKEP 
Sbjct: 80  LGCKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPG 139

Query: 129 EPTEETSVEKPTSTEAEKRQDLKVSNQKET 158
           E  ++     PT+    + + L+ S+ KE+
Sbjct: 140 EGGDQPPPATPTAVSGGEEKGLEASSSKES 169

[Close]

BLAST of Pay0001290 vs. ExPASy Swiss-Prot
Match: Q75GK3 (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATA PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 72/169 (42.60%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 2   VISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFA---NNATVSFFTNGDHNHSSVLRLTSF 61
           V + P+ S +S++ + P + +   +++  A  A    ++  S F  G     +V      
Sbjct: 6   VATYPSSSSSSTLARPPCAAAGRAAAAGRARVAAAGMSSRASSFVTGGAGGLAVAVAART 65

Query: 62  RTTTKTTHKG---LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQA 121
           R  +    +G   + C  LFGLGVPELVVIAGVAALVFGPK+LPE+G+SIGKTVKSFQQA
Sbjct: 66  RAGSGAGSRGGGAMGCKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQA 125

Query: 122 AKEFESELKKE-------PEPTEETSVEKPTSTEAEKRQDLKVSNQKET 158
           AKEFE+ELKKE       P P  ET+V     ++  + ++L+ S+ KE+
Sbjct: 126 AKEFETELKKESDDGGDQPPPPTETAV-----SDGGEEKELEASSSKES 169

[Close]

BLAST of Pay0001290 vs. ExPASy Swiss-Prot
Match: Q31RR1 (Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=tatA PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.7e-12
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 75  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETS 134
           FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E + T  T 
Sbjct: 4   FGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATP 63

Query: 135 VE---KPTSTEAEKRQDLKVSNQKET 158
            E   +P   ++   + + V  Q ET
Sbjct: 64  AEATVEPPVLDSAPTEAVTVEKQTET 89

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BLAST of Pay0001290 vs. ExPASy TrEMBL
Match: A0A1S3BPB0 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492233 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.4e-74
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSS+LRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 158

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BLAST of Pay0001290 vs. ExPASy TrEMBL
Match: A0A0A0LWL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573670 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.1e-71
Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPSFSSSKSAFFANNAT SFFT GDHNHSS+LRLTSFRT
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKG TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPEPTEETSVEKPTSTEAE+RQDLKVSNQKETV
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQKETV 158

[Close]

BLAST of Pay0001290 vs. ExPASy TrEMBL
Match: A0A5D3CIV6 (Sec-independent protein translocase protein TATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003240 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 149/156 (95.51%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSS+LRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKE 157
           SELKKEPEPTEETSVEKPTSTEAEKRQDLK+   ++
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKLLESED 156

[Close]

BLAST of Pay0001290 vs. ExPASy TrEMBL
Match: A0A6J1HYU6 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468153 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.4e-52
Identity = 124/158 (78.48%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVIS+ TLSFTSSIP+L PS SP  SSSKS+FFANNAT + F  GDH+HSS+LR T  R 
Sbjct: 1   MVISSATLSFTSSIPRL-PSFSPPLSSSKSSFFANNATANSFNKGDHSHSSLLRTTRSRK 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           T    HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPE   ET+VEKPTS + E++QDLK SNQKE+V
Sbjct: 121 SELKKEPESIGETAVEKPTSVDDEEKQDLKASNQKESV 157

[Close]

BLAST of Pay0001290 vs. ExPASy TrEMBL
Match: A0A6J1EWP2 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439076 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.4e-52
Identity = 124/158 (78.48%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVIS+ TLSFTSSIP+L PS SP FSSSKS+FFANNAT + F  GDH+HS +LR T  R 
Sbjct: 1   MVISSATLSFTSSIPRL-PSFSPPFSSSKSSFFANNATANSFNKGDHSHSLLLRTTRSRK 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           T    HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPE   ET+VEKP S + E++QDLKVSNQKE+V
Sbjct: 121 SELKKEPESIGETAVEKPASIDDEEKQDLKVSNQKESV 157

[Close]

BLAST of Pay0001290 vs. NCBI nr
Match: XP_008450744.1 (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucumis melo] >XP_008450746.1 PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 1.7e-73
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSS+LRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 158

[Close]

BLAST of Pay0001290 vs. NCBI nr
Match: XP_004135654.1 (sec-independent protein translocase protein TATA, chloroplastic [Cucumis sativus] >KGN66148.1 hypothetical protein Csa_007404 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 1.1e-70
Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPSFSSSKSAFFANNAT SFFT GDHNHSS+LRLTSFRT
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKG TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPEPTEETSVEKPTSTEAE+RQDLKVSNQKETV
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQKETV 158

[Close]

BLAST of Pay0001290 vs. NCBI nr
Match: TYK10179.1 (sec-independent protein translocase protein TATA [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 2.6e-69
Identity = 149/156 (95.51%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSS+LRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKE 157
           SELKKEPEPTEETSVEKPTSTEAEKRQDLK+   ++
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKLLESED 156

[Close]

BLAST of Pay0001290 vs. NCBI nr
Match: XP_038879779.1 (sec-independent protein translocase protein TATA, chloroplastic [Benincasa hispida])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 135/158 (85.44%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVIS+ TLSFTSSIP+ PPSLS  FS SKSAFFANNAT +FFTNGD NH S+LR + FRT
Sbjct: 27  MVISSATLSFTSSIPRPPPSLSSPFSCSKSAFFANNATANFFTNGDLNHFSLLRTSRFRT 86

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TT T HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 87  TTYTPHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 146

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPE  EET+VEKPTS E E+RQDLKVSNQKETV
Sbjct: 147 SELKKEPESIEETAVEKPTSAEEEERQDLKVSNQKETV 184

[Close]

BLAST of Pay0001290 vs. NCBI nr
Match: KAG7020882.1 (Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.6 bits (553), Expect = 7.6e-53
Identity = 125/158 (79.11%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRT 60
           MVIS+ TLSFTSSIP+L PS SP FSSSKS+FFANN T + F  GDH+HSS+LR T  R 
Sbjct: 1   MVISSVTLSFTSSIPRL-PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRK 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           T    HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPE   ET+VEKPTS + E++QDLKVSNQKE+V
Sbjct: 121 SELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV 157

[Close]

BLAST of Pay0001290 vs. TAIR 10
Match: AT5G28750.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 122.1 bits (305), Expect = 4.0e-28
Identity = 81/141 (57.45%), Postives = 96/141 (68.09%), Query Frame = 0


Query: 18  PPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSVLRLTSFRTTTKTTHKGLTCNALFGL 77
           PP   P  SSS+S+FF+N  TV+   N     +  L     R   + T K LTCNALFGL
Sbjct: 12  PPVSLPLLSSSRSSFFSNCFTVTTRPN-----TRSLVAIGRRIRQEPTRKPLTCNALFGL 71

Query: 78  GVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEK 137
           GVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKEFESELK EPE +   S + 
Sbjct: 72  GVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQV 131

Query: 138 PTSTEAEKRQDLKVSNQKETV 159
            TS + E+++    S+ KE V
Sbjct: 132 ATSNKEEEKKTEVSSSSKENV 147

[Close]

BLAST of Pay0001290 vs. TAIR 10
Match: AT5G52440.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 44/145 (30.34%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVS--FFTNGDHNHSSVLRL--- 60
           M ++   ++ +SS P +  S   S+   +S + A+   +S  F   G    S  + L   
Sbjct: 1   MAMALQIIASSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHL 60

Query: 61  -TSFRTTTKTTHKGLTCN------ALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKT 120
             S    +    K   C       +LFG+G PE +VI  VA LVFGPK L EV +++GKT
Sbjct: 61  GISISPKSSNPEKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKT 120

Query: 121 VKSF-------QQAAKEFESELKKE 127
           +++F       Q  +++F+S L++E
Sbjct: 121 LRTFQPTIRELQDVSRDFKSTLERE 145

The following BLAST results are available for this feature:

BLAST of Pay0001290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XH46	3.9e-28	58.55	Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum...	[more]
Q9LKU2	5.7e-27	57.45	Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis t...	[more]
Q9XFJ8	3.0e-20	64.44	Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4...	[more]
Q75GK3	1.8e-17	42.60	Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa ...	[more]
Q31RR1	6.7e-12	46.51	Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (str...	[more]

BLAST of Pay0001290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPB0	8.4e-74	99.37	sec-independent protein translocase protein TATA, chloroplastic OS=Cucumis melo ...	[more]
A0A0A0LWL1	5.1e-71	96.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573670 PE=3 SV=1	[more]
A0A5D3CIV6	1.3e-69	95.51	Sec-independent protein translocase protein TATA OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1HYU6	1.4e-52	78.48	sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita max...	[more]
A0A6J1EWP2	2.4e-52	78.48	sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita mos...	[more]

BLAST of Pay0001290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450744.1	1.7e-73	99.37	PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucu...	[more]
XP_004135654.1	1.1e-70	96.20	sec-independent protein translocase protein TATA, chloroplastic [Cucumis sativus...	[more]
TYK10179.1	2.6e-69	95.51	sec-independent protein translocase protein TATA [Cucumis melo var. makuwa]	[more]
XP_038879779.1	2.4e-59	85.44	sec-independent protein translocase protein TATA, chloroplastic [Benincasa hispi...	[more]
KAG7020882.1	7.6e-53	79.11	Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurb...	[more]

BLAST of Pay0001290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28750.1	4.0e-28	57.45	Bacterial sec-independent translocation protein mttA/Hcf106	[more]
AT5G52440.1	1.8e-04	30.34	Bacterial sec-independent translocation protein mttA/Hcf106	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01506	TATBPROTEIN	coord: 74..94 score: 35.53 coord: 94..113 score: 27.65 coord: 113..131 score: 24.85
None	No IPR available	GENE3D	1.20.5.3310		coord: 76..127 e-value: 1.4E-18 score: 68.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..158
None	No IPR available	PANTHER	PTHR33162	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC	coord: 18..134
None	No IPR available	PANTHER	PTHR33162:SF6	BNAC07G27450D PROTEIN	coord: 18..134
IPR003369	Sec-independent protein translocase protein TatA/B/E	PFAM	PF02416	TatA_B_E	coord: 77..126 e-value: 1.1E-19 score: 69.5
IPR006312	Sec-independent protein translocase protein TatA/E	TIGRFAM	TIGR01411	TIGR01411	coord: 76..122 e-value: 5.0E-20 score: 68.8
IPR006312	Sec-independent protein translocase protein TatA/E	HAMAP	MF_00236	TatA_E	coord: 74..157 score: 19.040058

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001290.2	Pay0001290.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051260	protein homooligomerization
biological_process	GO:0043953	protein transport by the Tat complex
biological_process	GO:0032594	protein transport within lipid bilayer
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex