Pay0001188 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001188
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrotransposon protein
Location	chr02: 14244416 .. 14245251 (-)
RNA-Seq Expression	Pay0001188
Synteny	Pay0001188

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGATGAGGTGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTGATAATGGAACATTCAAATTGGGATATTTGGTACAAGTACAAAAACTAATGAAAGAAAAAATTCTTGGAAGCAACATACAAGTGACTCCAAATTTAAAGTCGAGAGTAAAAATTTTAAAGAAGCAGTACATTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTTGATGATTGGGTTAAAGTAAGAAGATGAATATAATTCATACTTTCTATAAAAGTAAAATATAATATACTTACATATGTTAACTCCATGTAGGGACACCCCAATGCTCGATGCCTACTAAATAAACCATTTCCTTACTTTTATGATTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTGTTGAAATGGGCTCATAGACTGCAAGAGATATTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCCATCCACTCCAACAAGTATGGCACATGATGCGGGATCATCTAGGCCAAGTAAGAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGTGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGTTGA

mRNA sequence

ATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGATGAGGTGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTGATAATGGAACATTCAAATTGGGATATTTGAAGCAGTACATTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTTGATGATTGGGTTAAAGGACACCCCAATGCTCGATGCCTACTAAATAAACCATTTCCTTACTTTTATGATTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCCATCCACTCCAACAAAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGTGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGTTGA

Coding sequence (CDS)

ATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGATGAGGTGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTGATAATGGAACATTCAAATTGGGATATTTGAAGCAGTACATTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTTGATGATTGGGTTAAAGGACACCCCAATGCTCGATGCCTACTAAATAAACCATTTCCTTACTTTTATGATTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCCATCCACTCCAACAAAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGTGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGTTGA

Protein sequence

MASTNSKATKHRWTTIDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTPEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTVIFRGPHGHISCKYARNFQGNWKDCCMAERKNGNRIIPTQTIIC

Homology

[Close]

BLAST of Pay0001188 vs. ExPASy TrEMBL
Match: A0A1S3CI24 (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103501201 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 8.9e-89
Identity = 164/201 (81.59%), Postives = 166/201 (82.59%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPAC 60
           MAST SKATKHRWTTI DE LVECLLQLVEEGGWRADNGTFK GYLKQY AIAEMMG AC
Sbjct: 1   MASTYSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLKQYTAIAEMMGQAC 60

Query: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP 120
           SGFGWNEERKCIEAEKSVFDDWVKGHPNAR LLNKPFPYFYDL++VFGRD ATG RCKTP
Sbjct: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARDLLNKPFPYFYDLKIVFGRDMATGDRCKTP 120

Query: 121 ------------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT-------------KKT 176
                       EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT             KKT
Sbjct: 121 VEMGSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKKT 180

[Close]

BLAST of Pay0001188 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.5e-80
Identity = 145/167 (86.83%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPAC 60
           MASTNSKATKHRWTTI DEVLVECLLQLVEEGGWRADNGTFKLGYLKQY AIAEMMGPAC
Sbjct: 138 MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGPAC 197

Query: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP 120
           SGFGWNE +KCIE EK VFDDWVKGHPNA+ LLNKPFPYFYDLEVVFGRDRATGGRCKTP
Sbjct: 198 SGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTP 257

Query: 121 ------------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKT 155
                       EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT  T
Sbjct: 258 VEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMT 304

[Close]

BLAST of Pay0001188 vs. ExPASy TrEMBL
Match: A0A5D3C542 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00540 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 132/152 (86.84%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPAC 60
           MASTNSKATKHRWTTI DEVLV CLLQLVEEGGWRADNGTFK GYLKQY AIAEMMGPAC
Sbjct: 253 MASTNSKATKHRWTTIEDEVLVGCLLQLVEEGGWRADNGTFKPGYLKQYTAIAEMMGPAC 312

Query: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP 120
           SGFGWNEERKCIEAEKSVFDDWVKGHP AR LLNKPFPYFYDLEVVFGRDRATGGR    
Sbjct: 313 SGFGWNEERKCIEAEKSVFDDWVKGHPKARGLLNKPFPYFYDLEVVFGRDRATGGRY--- 372

Query: 121 EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT 152
                     FDIPNPHGLEPPSGEDMPSTPT
Sbjct: 373 ----------FDIPNPHGLEPPSGEDMPSTPT 391

[Close]

BLAST of Pay0001188 vs. ExPASy TrEMBL
Match: A0A5D3DJR9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold580G00150 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 126/158 (79.75%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 7   KATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPACSGFGWN 66
           +ATKH+WTTI DE LVEC LQLVEEG WR DNGTFK GYLKQY AIAEMM P CSGFGWN
Sbjct: 67  RATKHQWTTIEDEALVECSLQLVEEGDWRVDNGTFKQGYLKQYTAIAEMMRPTCSGFGWN 126

Query: 67  EERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP------ 126
           EERKCI+AEK VFDDWVKGHPNA+ LLNKPFPYFYDLE++FGRDRATGGRCKTP      
Sbjct: 127 EERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQ 186

Query: 127 ------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT 152
                 EDDMDINLE+FDI NPHGLEPPSGEDM STPT
Sbjct: 187 IARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPT 224

[Close]

BLAST of Pay0001188 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.0e-68
Identity = 135/192 (70.31%), Postives = 140/192 (72.92%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYL-------------- 60
           MASTNSKATKHRWTTI D+ LVECLLQLVEEGGWRA+N TFK  YL              
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 61  ----------------KQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKGHPNAR 120
                           KQY AIA+MMGPACS FGWNEERKCIEAEKSVFDDWVKGHPNAR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 121 CLLNKPFPYFYDLEVVFGRDRATGGRCK------------TPEDDMDINLEDFDIPNPHG 150
            LLNKPF YFYDLE+VFGRD+ATGGRCK            T EDDMDINLEDFDIPNPHG
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

[Close]

BLAST of Pay0001188 vs. NCBI nr
Match: XP_008462939.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88
Identity = 164/201 (81.59%), Postives = 166/201 (82.59%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPAC 60
           MAST SKATKHRWTTI DE LVECLLQLVEEGGWRADNGTFK GYLKQY AIAEMMG AC
Sbjct: 1   MASTYSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLKQYTAIAEMMGQAC 60

Query: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP 120
           SGFGWNEERKCIEAEKSVFDDWVKGHPNAR LLNKPFPYFYDL++VFGRD ATG RCKTP
Sbjct: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARDLLNKPFPYFYDLKIVFGRDMATGDRCKTP 120

Query: 121 ------------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT-------------KKT 176
                       EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT             KKT
Sbjct: 121 VEMGSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKKT 180

[Close]

BLAST of Pay0001188 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 145/167 (86.83%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPAC 60
           MASTNSKATKHRWTTI DEVLVECLLQLVEEGGWRADNGTFKLGYLKQY AIAEMMGPAC
Sbjct: 138 MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGPAC 197

Query: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP 120
           SGFGWNE +KCIE EK VFDDWVKGHPNA+ LLNKPFPYFYDLEVVFGRDRATGGRCKTP
Sbjct: 198 SGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTP 257

Query: 121 ------------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKT 155
                       EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT  T
Sbjct: 258 VEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMT 304

[Close]

BLAST of Pay0001188 vs. NCBI nr
Match: TYK06362.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.0 bits (702), Expect = 5.0e-70
Identity = 132/152 (86.84%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPAC 60
           MASTNSKATKHRWTTI DEVLV CLLQLVEEGGWRADNGTFK GYLKQY AIAEMMGPAC
Sbjct: 253 MASTNSKATKHRWTTIEDEVLVGCLLQLVEEGGWRADNGTFKPGYLKQYTAIAEMMGPAC 312

Query: 61  SGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP 120
           SGFGWNEERKCIEAEKSVFDDWVKGHP AR LLNKPFPYFYDLEVVFGRDRATGGR    
Sbjct: 313 SGFGWNEERKCIEAEKSVFDDWVKGHPKARGLLNKPFPYFYDLEVVFGRDRATGGRY--- 372

Query: 121 EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT 152
                     FDIPNPHGLEPPSGEDMPSTPT
Sbjct: 373 ----------FDIPNPHGLEPPSGEDMPSTPT 391

[Close]

BLAST of Pay0001188 vs. NCBI nr
Match: KAA0060670.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK23802.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 268.9 bits (686), Expect = 3.6e-68
Identity = 126/158 (79.75%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 7   KATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLKQYIAIAEMMGPACSGFGWN 66
           +ATKH+WTTI DE LVEC LQLVEEG WR DNGTFK GYLKQY AIAEMM P CSGFGWN
Sbjct: 67  RATKHQWTTIEDEALVECSLQLVEEGDWRVDNGTFKQGYLKQYTAIAEMMRPTCSGFGWN 126

Query: 67  EERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATGGRCKTP------ 126
           EERKCI+AEK VFDDWVKGHPNA+ LLNKPFPYFYDLE++FGRDRATGGRCKTP      
Sbjct: 127 EERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQ 186

Query: 127 ------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT 152
                 EDDMDINLE+FDI NPHGLEPPSGEDM STPT
Sbjct: 187 IARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPT 224

[Close]

BLAST of Pay0001188 vs. NCBI nr
Match: TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 268.1 bits (684), Expect = 6.1e-68
Identity = 135/192 (70.31%), Postives = 140/192 (72.92%), Query Frame = 0


Query: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYL-------------- 60
           MASTNSKATKHRWTTI D+ LVECLLQLVEEGGWRA+N TFK  YL              
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 61  ----------------KQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKGHPNAR 120
                           KQY AIA+MMGPACS FGWNEERKCIEAEKSVFDDWVKGHPNAR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 121 CLLNKPFPYFYDLEVVFGRDRATGGRCK------------TPEDDMDINLEDFDIPNPHG 150
            LLNKPF YFYDLE+VFGRD+ATGGRCK            T EDDMDINLEDFDIPNPHG
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

[Close]

BLAST of Pay0001188 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 6.9e-09
Identity = 26/83 (31.33%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 46  KQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVV 105
           +Q+ AI  ++     GF W+ ER+ + A+ +V+ D++K H +AR  + +P PY+ DL V+
Sbjct: 246 RQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVL 305

Query: 106 FGRDRATGGRCKTPEDDMDINLE 129
            G        C    D  D   E
Sbjct: 306 CGDSGIEENECFVAMDWFDPETE 326

[Close]

BLAST of Pay0001188 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 58.5 bits (140), Expect = 6.9e-09
Identity = 26/83 (31.33%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 46  KQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVV 105
           +Q+ AI  ++     GF W+ ER+ + A+ +V+ D++K H +AR  + +P PY+ DL V+
Sbjct: 246 RQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVL 305

Query: 106 FGRDRATGGRCKTPEDDMDINLE 129
            G        C    D  D   E
Sbjct: 306 CGDSGIEENECFVAMDWFDPETE 326

[Close]

BLAST of Pay0001188 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 5.8e-08
Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 41  KLGYLK-QYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYF 100
           ++ YLK QY +  ++     SGFGW+   K   A   V+ D++K HPN + L    F +F
Sbjct: 73  RMKYLKIQYQSCLDLQ-RFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFF 132

Query: 101 YDLEVVFGRDRATG 114
            +L+++FG   ATG
Sbjct: 133 DELQIIFGEGVATG 145

[Close]

BLAST of Pay0001188 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07
Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 60  SGFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVFGRDRATG 114
           SGFGW+ E K   A   V+ D++K HPN + +  +   +F DL+++FG   ATG
Sbjct: 88  SGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDHFEDLQIIFGDVVATG 141

[Close]

BLAST of Pay0001188 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 5.4e-06
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 61  GFGWNEERKCIEAEKSVFDDWVKGHPNARCLLNKPFPYFYDLEVVF 107
           GF W+E R  I A+ +V+D ++K HP AR    K  P + DL+ +F
Sbjct: 245 GFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIF 290

The following BLAST results are available for this feature:

BLAST of Pay0001188 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0001188 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CI24	8.9e-89	81.59	uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103501201 P...	[more]
A0A5D3C7T4	7.5e-80	86.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C542	2.4e-70	86.84	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DJR9	1.7e-68	79.75	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BC95	3.0e-68	70.31	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Pay0001188 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462939.1	1.8e-88	81.59	PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]	[more]
TYK07921.1	1.6e-79	86.83	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
TYK06362.1	5.0e-70	86.84	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060670.1	3.6e-68	79.75	retrotransposon protein [Cucumis melo var. makuwa] >TYK23802.1 retrotransposon p...	[more]
TYJ96933.1	6.1e-68	70.31	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0001188 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02210.1	6.9e-09	31.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	6.9e-09	31.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G27260.1	5.8e-08	36.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G30140.1	1.7e-07	40.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.1	5.4e-06	41.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 46..156
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 46..156
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 2..47
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 2..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001188.1	Pay0001188.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding