Pay0001107 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001107
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr04: 4124349 .. 4126354 (-)
RNA-Seq Expression	Pay0001107
Synteny	Pay0001107

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGTTGTAAAGAAGGAAAAAGGTGAGATGGTTCCAATGCGAATGCAAAATGGTTGGAGAATGTGCATAGATTACCGGAAACTCAATGAAGTAACAAAAAAGGATCATTTCCCCTTACCTTTTCTTGATCAAATGATAGAACGCTTAGCGAGTAGATCATATTTTTGTTTCTTAGATGGATTTTCCAATTTTTACCAAATTCCTATAGCATGTGAACACCAAAAGAAAACAACTTTTACTTGTAATTATGGAACTTATGCATTTGGCGTATGCCATTTGGTCTTTGTAATGCACCGGGCACATTCCAACGTTGCATGATGAGCATATTTTTCGACTTTATTGAAAAATGCCTTGAAGTTTTCATGGATGATCTCACAGTTTATGGTGATAGTTTCGATGCATGTTTATCCAGTATAGAATTAATTCTAAATAGATGCATAGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAATTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAGCAAAAATTGACGTTATACAAAAATTGCCATATCCAACATGTTTAAAAGATGTTAGATTCTTCCTTGGTAGTGTCGGCTTTTATAGACGGTTTATAAAATATTTTTCTAAAATTGCTTTGCCTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAAGGTTAGTCTCTACCCCTATCCTTCAATCTCCTAATTGGAATTTACCTTCCGAAATAATGTGTAATGCAAGCAACTTAGCATTAGGAGCTGGTTTAGGACAAAGGATAGATAAAAAATTGCATGCTATATACTATGCATTTAGGACCCTTAACCAAGCACTATTTAACTACACCACAACTGAAAAAGAATTTCTTGCTATCGTTTTTGCTTTAGATAAGTTTAGAAGCTACATTATTGGCTCCCCAGTAATTGTTTACACTGATCATGCAGCAGTTAGGTACCTTATATCAAAAAAAGAATCAAAACCAAGGCTTGTTCGATGGGTTTTACTTTTGCAAGAATTTAACCTAACCATCAAGGATAGAAAAGGAGCCAACAATTTTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTCGAGAAGACTTCCCTGATGAACATCTCTTTCAAACAAATCATCAAGCACCATGGTATGCCGATATTGTAAACTACTTAGTCAAGGGTAACTTTCCTTAATACTTTTCTTTTTCACAAAAAGCCAAATTACGTAGTGACGCTGAAAACTATTTTTGGAAACTACCATGCCTTTGAAAATATTGTTCTGACCAAATCATTAGGAAATGTGTTCCCGAGCATGAACATGAATCAATTTTATCATTTTGTCATGATCATGCATGCAGAGGTCACTTTAGTCCTAAAAGAACGGCTAGGAAAATTTTAGATAGTGGATTCTTTTGGAAAATATTATTTGTAGATTCTTTTTCATTTTGTAAATCATGTGCAAACTGTCAAAGAACCGGATCTCTATCTAGGAGAAATGAAATGTCCCTTCACCCCGTTATTACTTGTGAAGTTTTTGATATTTGAGAAATGGATTTTATGGGTCCCTTTCCTTCTTCTTTTGAATATCTTTACATTTTATTAGCCGTTGATTATGTATCGAAGTGGGTTGAAGCAATCCCCACTAGGACTAATGATTCTTCTGTTGTCTCAAGATTTCTAGTTTCTAACATATTTTTTAGATTTGGCATCCCAAGGGCAATCATTAGAGATCAAGGAACACACTTTTGCAATCGAACCGTTGAACCCTTCATGAGAAAATATGGTGTTCAACACCGTATTTTCACACCATACCATCCTCAAACGAACGAACAGGCCAAAACTTCTAATCGAGAGATAAAAAATATCCTAGAGAAAACCCGTCAACACAAAAAGGAAGGATTGGAGCCTCCGCATCAATGA

mRNA sequence

ATGACCGTTGTAAAGAAGGAAAAAGGTGAGATGGTTCCAATGCGAATGCAAAATGGTTGGAGAATGTGCATAGATTACCGGAAACTCAATGAAGTAACAAAAAAGGATCATTTCCCCTTACCTTTTCTTGATCAAATGATAGAACGCTTAGCGAGTAGATCATATTTTTGTTTCTTAGATGGATTTTCCAATTTTTACCAAATTCCTATAGCATGTGAACACCAAAAGAAAACAACTTTTACTTTTTTCATGGATGATCTCACAGTTTATGGTGATAGTTTCGATGCATGTTTATCCAGTATAGAATTAATTCTAAATAGATGCATAGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAATTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAGCAAAAATTGACGTTATACAAAAATTGCCATATCCAACATGTTTAAAAGATGTTAGATTCTTCCTTGGTAGTGTCGGCTTTTATAGACGGTTTATAAAATATTTTTCTAAAATTGCTTTGCCTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAAGGTTAGTCTCTACCCCTATCCTTCAATCTCCTAATTGGAATTTACCTTCCGAAATAATGTGTAATGCAAGCAACTTAGCATTAGGAGCTGGTTTAGGACAAAGGATAGATAAAAAATTGCATGCTATATACTATGCATTTAGGACCCTTAACCAAGCACTATTTAACTACACCACAACTGAAAAAGAATTTCTTGCTATCGTTTTTGCTTTAGATAAGTTTAGAAGCTACATTATTGGCTCCCCAGTAATTGTTTACACTGATCATGCAGCAGTTAGGTACCTTATATCAAAAAAAGAATCAAAACCAAGGCTTGTTCGATGGGTTTTACTTTTGCAAGAATTTAACCTAACCATCAAGGATAGAAAAGGAGCCAACAATTTTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTCGAGAAGACTTCCCTGATGAACATCTCTTTCAAACAAATCATCAAGCACCATGGTATGCCGATATTGTAAACTACTTAGTCAAGGAAATGGATTTTATGGGTCCCTTTCCTTCTTCTTTTGAATATCTTTACATTTTATTAGCCGTTGATTATGTATCGAAGTGGGTTGAAGCAATCCCCACTAGGACTAATGATTCTTCTGTTGTCTCAAGATTTCTAGTTTCTAACATATTTTTTAGATTTGGCATCCCAAGGGCAATCATTAGAGATCAAGGAACACACTTTTGCAATCGAACCGTTGAACCCTTCATGAGAAAATATGGTGTTCAACACCGTATTTTCACACCATACCATCCTCAAACGAACGAACAGGCCAAAACTTCTAATCGAGAGATAAAAAATATCCTAGAGAAAACCCGTCAACACAAAAAGGAAGGATTGGAGCCTCCGCATCAATGA

Coding sequence (CDS)

ATGACCGTTGTAAAGAAGGAAAAAGGTGAGATGGTTCCAATGCGAATGCAAAATGGTTGGAGAATGTGCATAGATTACCGGAAACTCAATGAAGTAACAAAAAAGGATCATTTCCCCTTACCTTTTCTTGATCAAATGATAGAACGCTTAGCGAGTAGATCATATTTTTGTTTCTTAGATGGATTTTCCAATTTTTACCAAATTCCTATAGCATGTGAACACCAAAAGAAAACAACTTTTACTTTTTTCATGGATGATCTCACAGTTTATGGTGATAGTTTCGATGCATGTTTATCCAGTATAGAATTAATTCTAAATAGATGCATAGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAATTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAGCAAAAATTGACGTTATACAAAAATTGCCATATCCAACATGTTTAAAAGATGTTAGATTCTTCCTTGGTAGTGTCGGCTTTTATAGACGGTTTATAAAATATTTTTCTAAAATTGCTTTGCCTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAAGGTTAGTCTCTACCCCTATCCTTCAATCTCCTAATTGGAATTTACCTTCCGAAATAATGTGTAATGCAAGCAACTTAGCATTAGGAGCTGGTTTAGGACAAAGGATAGATAAAAAATTGCATGCTATATACTATGCATTTAGGACCCTTAACCAAGCACTATTTAACTACACCACAACTGAAAAAGAATTTCTTGCTATCGTTTTTGCTTTAGATAAGTTTAGAAGCTACATTATTGGCTCCCCAGTAATTGTTTACACTGATCATGCAGCAGTTAGGTACCTTATATCAAAAAAAGAATCAAAACCAAGGCTTGTTCGATGGGTTTTACTTTTGCAAGAATTTAACCTAACCATCAAGGATAGAAAAGGAGCCAACAATTTTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTCGAGAAGACTTCCCTGATGAACATCTCTTTCAAACAAATCATCAAGCACCATGGTATGCCGATATTGTAAACTACTTAGTCAAGGAAATGGATTTTATGGGTCCCTTTCCTTCTTCTTTTGAATATCTTTACATTTTATTAGCCGTTGATTATGTATCGAAGTGGGTTGAAGCAATCCCCACTAGGACTAATGATTCTTCTGTTGTCTCAAGATTTCTAGTTTCTAACATATTTTTTAGATTTGGCATCCCAAGGGCAATCATTAGAGATCAAGGAACACACTTTTGCAATCGAACCGTTGAACCCTTCATGAGAAAATATGGTGTTCAACACCGTATTTTCACACCATACCATCCTCAAACGAACGAACAGGCCAAAACTTCTAATCGAGAGATAAAAAATATCCTAGAGAAAACCCGTCAACACAAAAAGGAAGGATTGGAGCCTCCGCATCAATGA

Protein sequence

MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFTFFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYLVKEMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIPRAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKTRQHKKEGLEPPHQ

Homology

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BLAST of Pay0001107 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.0e-54
Identity = 127/367 (34.60%), Postives = 190/367 (51.77%), Query Frame = 0


Query: 20  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTT 79
           +R+ IDYRKLNE+T  D  P+P +D+++ +L   +YF  +D    F+QI +  E   KT 
Sbjct: 262 FRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTA 321

Query: 80  FT---------------------------------------FFMDDLTVYGDSFDACLSS 139
           F+                                        ++DD+ V+  S D  L S
Sbjct: 322 FSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQS 381

Query: 140 IELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKD 199
           + L+  +  + NL L  +KC F+      LGH+++  GI+ +  KI+ IQK P PT  K+
Sbjct: 382 LGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKE 441

Query: 200 VRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPF-LIDDNCKKAFDDLKQRLVSTPILQ 259
           ++ FLG  G+YR+FI  F+ IA P+T  L+K++     +     AF  LK  +   PIL+
Sbjct: 442 IKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILK 501

Query: 260 SPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVF 319
            P++     +  +AS++ALGA L Q      H + Y  RTLN+   NY+T EKE LAIV+
Sbjct: 502 VPDFTKKFTLTTDASDVALGAVLSQ----DGHPLSYISRTLNEHEINYSTIEKELLAIVW 561

Query: 320 ALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFV 347
           A   FR Y++G    + +DH  + +L   K+   +L RW + L EF+  IK  KG  N V
Sbjct: 562 ATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCV 621

[Close]

BLAST of Pay0001107 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.8e-54
Identity = 129/372 (34.68%), Postives = 191/372 (51.34%), Query Frame = 0


Query: 18  NGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKK 77
           N +R+ IDYRKLNE+T  D +P+P +D+++ +L    YF  +D    F+QI +  E   K
Sbjct: 259 NKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISK 318

Query: 78  TTFT---------------------------------------FFMDDLTVYGDSFDACL 137
           T F+                                        ++DD+ ++  S    L
Sbjct: 319 TAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHL 378

Query: 138 SSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCL 197
           +SI+L+  +  + NL L  +KC F+      LGH+V+  GI+ +  K+  I   P PT  
Sbjct: 379 NSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKD 438

Query: 198 KDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCK----KAFDDLKQRLVS 257
           K++R FLG  G+YR+FI  ++ IA P+T+ L+K       D  K    +AF+ LK  ++ 
Sbjct: 439 KEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKI---DTQKLEYIEAFEKLKALIIR 498

Query: 258 TPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEF 317
            PILQ P++     +  +ASNLALGA L Q      H I +  RTLN    NY+  EKE 
Sbjct: 499 DPILQLPDFEKKFVLTTDASNLALGAVLSQ----NGHPISFISRTLNDHELNYSAIEKEL 558

Query: 318 LAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKG 347
           LAIV+A   FR Y++G   ++ +DH  +R+L + KE   +L RW + L E+   I   KG
Sbjct: 559 LAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKG 618

[Close]

BLAST of Pay0001107 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.6e-53
Identity = 121/378 (32.01%), Postives = 197/378 (52.12%), Query Frame = 0


Query: 20  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTT 79
           +RM +D+++LN VT  D +P+P ++  +  L +  YF  LD  S F+QI +      KT 
Sbjct: 178 YRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTA 237

Query: 80  FT---------------------------------------FFMDDLTVYGDSFDACLSS 139
           F+                                        ++DD+ V+ + +D    +
Sbjct: 238 FSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKN 297

Query: 140 IELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKD 199
           + L+L    + NL +N EK HF+ +    LG++V++ GI+ D  K+  I ++P PT +K+
Sbjct: 298 LRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKE 357

Query: 200 VRFFLGSVGFYRRFIKYFSKIALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLK 259
           ++ FLG   +YR+FI+ ++K+A PLTNL +             VP  +D+   ++F+DLK
Sbjct: 358 LKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLK 417

Query: 260 QRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTT 319
             L S+ IL  P +  P  +  +ASN A+GA L Q    +   I Y  R+LN+   NY T
Sbjct: 418 SILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYAT 477

Query: 320 TEKEFLAIVFALDKFRSYIIGSPVI-VYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLT 347
            EKE LAI+++LD  R+Y+ G+  I VYTDH  + + +  +    +L RW   ++E+N  
Sbjct: 478 IEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCE 537

[Close]

BLAST of Pay0001107 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.3e-52
Identity = 130/370 (35.14%), Postives = 183/370 (49.46%), Query Frame = 0


Query: 20  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTT 79
           WR+ IDYR++N+    D FPLP +D ++++L    YF  LD  S F+QI +    +  T+
Sbjct: 370 WRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITS 429

Query: 80  FT---------------------------------------FFMDDLTVYGDSFDACLSS 139
           F+                                        +MDDL V G S    L +
Sbjct: 430 FSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKN 489

Query: 140 IELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKD 199
           +  +  +C E NL L+ EKC F +     LGH  + KGI  D  K DVIQ  P P     
Sbjct: 490 LTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADS 549

Query: 200 VRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQS 259
            R F+    +YRRFIK F+  +  +T L +K+VPF   D C+KAF  LK +L++  +LQ 
Sbjct: 550 ARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQY 609

Query: 260 PNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFA 319
           P+++    I  +AS  A GA L Q  +     + YA R   +   N +TTE+E  AI +A
Sbjct: 610 PDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWA 669

Query: 320 LDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVA 351
           +  FR YI G    V TDH  + YL S      +L R  L L+E+N T++  KG +N VA
Sbjct: 670 IIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVA 729

[Close]

BLAST of Pay0001107 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.7e-43
Identity = 127/411 (30.90%), Postives = 208/411 (50.61%), Query Frame = 0


Query: 21  RMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPI--ACEHQ--- 80
           RM +DY+ LN+  K + +PLP ++Q++ ++   + F  LD  S ++ I +    EH+   
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAF 522

Query: 81  ----------------------------------KKTTFTFFMDDLTVYGDSFDACLSSI 140
                                             K++    +MDD+ ++  S    +  +
Sbjct: 523 RCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHV 582

Query: 141 ELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV 200
           + +L +    NL++N  KC F  S    +G+ +S KG    +  ID + +   P   K++
Sbjct: 583 KDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKEL 642

Query: 201 RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSP 260
           R FLGSV + R+FI   S++  PL NLL+KDV +       +A +++KQ LVS P+L+  
Sbjct: 643 RQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHF 702

Query: 261 NWNLPSEIMCNASNLALGAGLGQR-IDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFA 320
           +++    +  +AS++A+GA L Q+  D K + + Y    +++A  NY+ ++KE LAI+ +
Sbjct: 703 DFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKS 762

Query: 321 LDKFRSYIIGS--PVIVYTDHAAVRYLISK--KESKP---RLVRWVLLLQEFNLTIKDRK 380
           L  +R Y+  +  P  + TDH   R LI +   ES+P   RL RW L LQ+FN  I  R 
Sbjct: 763 LKHWRHYLESTIEPFKILTDH---RNLIGRITNESEPENKRLARWQLFLQDFNFEINYRP 822

Query: 381 GANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYLVKE 385
           G+ N +AD LSRIV + E  PI +D  D  +   N Q     D  N +V E
Sbjct: 823 GSANHIADALSRIVDETE--PIPKDSEDNSINFVN-QISITDDFKNQVVTE 867

[Close]

BLAST of Pay0001107 vs. ExPASy TrEMBL
Match: A0A6P8E7C5 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116210952 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 1.3e-184
Identity = 336/655 (51.30%), Postives = 417/655 (63.66%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAS+SYFCFLD
Sbjct: 1116 LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLASKSYFCFLD 1175

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 1176 GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1235

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1236 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1295

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1296 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1355

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1356 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1415

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1416 AAQRNYSTTEKELLAIVFALEKFRSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1475

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1476 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1535

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1536 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1595

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1596 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1655

[Close]

BLAST of Pay0001107 vs. ExPASy TrEMBL
Match: A0A6P8E830 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116212259 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 3.8e-184
Identity = 335/655 (51.15%), Postives = 416/655 (63.51%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLD
Sbjct: 939  LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFLD 998

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 999  GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1058

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1059 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1118

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1119 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1178

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1179 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1238

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1239 AAQRNYSTTEKELLAIVFALEKFRSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1298

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1299 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1358

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1359 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1418

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1419 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1478

[Close]

BLAST of Pay0001107 vs. ExPASy TrEMBL
Match: A0A6P8D4X0 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116204210 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 1.1e-183
Identity = 334/655 (50.99%), Postives = 416/655 (63.51%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLD
Sbjct: 939  LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFLD 998

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 999  GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1058

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1059 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1118

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1119 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1178

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1179 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1238

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LAIVFAL+KF+SY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1239 AAQRNYSTTEKELLAIVFALEKFQSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1298

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1299 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1358

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1359 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1418

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1419 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1478

[Close]

BLAST of Pay0001107 vs. ExPASy TrEMBL
Match: A0A6P8DJV3 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116205261 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.9e-183
Identity = 334/655 (50.99%), Postives = 415/655 (63.36%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLD
Sbjct: 939  LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFLD 998

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 999  GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1058

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1059 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1118

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1119 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1178

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1179 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1238

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A   Y+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1239 AAQRKYSTTEKELLAIVFALEKFRSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1298

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1299 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1358

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1359 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1418

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1419 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1478

[Close]

BLAST of Pay0001107 vs. ExPASy TrEMBL
Match: A0A6P6V9E5 (uncharacterized protein LOC113718514 OS=Coffea arabica OX=13443 GN=LOC113718514 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 6.6e-181
Identity = 333/654 (50.92%), Postives = 407/654 (62.23%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +TV   + GE+VP+R   GWR CIDYR+LN VTKKDHFPLPF+DQM+ERLA R+Y+CFLD
Sbjct: 971  VTVEANQTGELVPVRKPTGWRQCIDYRRLNAVTKKDHFPLPFIDQMVERLAGRAYYCFLD 1030

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            GFS ++QI IA E Q+KTTFT                                       
Sbjct: 1031 GFSGYFQIAIAPEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMVSIFSEYVEKIIE 1090

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD +VYGDSFD CL +++LIL RCIETNLVLN+EKCHFMV HGI+LGH+VSSKGIEV
Sbjct: 1091 VFMDDFSVYGDSFDTCLDNLKLILIRCIETNLVLNWEKCHFMVEHGIVLGHIVSSKGIEV 1150

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DKAKID+I  LPYP  +++VR FLG  GFYRRFIK FSKI  PL  LLQKDV F  +D C
Sbjct: 1151 DKAKIDIISALPYPASVREVRSFLGHAGFYRRFIKDFSKIGAPLFQLLQKDVTFEFNDKC 1210

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            +KAF+ LK+ L S PI+Q P+WNLP EIMC+AS+ A+GA LGQR+ K  H IYYA R LN
Sbjct: 1211 EKAFNKLKELLTSPPIIQPPDWNLPFEIMCDASDHAIGAVLGQRVGKAAHVIYYASRALN 1270

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LA++FAL+KFRSY++G+ VIV++DHAA+RYL++KK++KPRL+RW+LL
Sbjct: 1271 GAQLNYSTTEKELLAVIFALEKFRSYLLGAKVIVFSDHAALRYLMTKKDAKPRLIRWILL 1330

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L I+D+KG+ N VADHLSRI   ++  P+++ FP+EHLF  N Q PWYAD+VNYL
Sbjct: 1331 LQEFDLEIRDKKGSENLVADHLSRIPIGEDKEPLKDAFPEEHLFSLNSQLPWYADLVNYL 1390

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1391 VTGDFPAGWPKSKKDKLKSDAKYFIWDDPYLWKRCADQIMRRCVSEVEFQSILAFCHAFA 1450

Query: 481  ------------------------------------------------------------ 494
                                                                        
Sbjct: 1451 CGGHFGPKRTAHKVLESGFYWPSLFKDAYVFCKSCDRCQRVGNIARRDQMPQVPLIFVEI 1510

[Close]

BLAST of Pay0001107 vs. NCBI nr
Match: XP_031400978.1 (uncharacterized protein LOC116210952 [Punica granatum])

HSP 1 Score: 656.0 bits (1691), Expect = 2.7e-184
Identity = 336/655 (51.30%), Postives = 417/655 (63.66%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAS+SYFCFLD
Sbjct: 1116 LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLASKSYFCFLD 1175

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 1176 GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1235

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1236 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1295

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1296 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1355

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1356 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1415

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1416 AAQRNYSTTEKELLAIVFALEKFRSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1475

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1476 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1535

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1536 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1595

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1596 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1655

[Close]

BLAST of Pay0001107 vs. NCBI nr
Match: XP_031402684.1 (uncharacterized protein LOC116212259 [Punica granatum])

HSP 1 Score: 654.4 bits (1687), Expect = 7.8e-184
Identity = 335/655 (51.15%), Postives = 416/655 (63.51%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLD
Sbjct: 939  LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFLD 998

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 999  GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1058

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1059 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1118

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1119 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1178

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1179 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1238

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1239 AAQRNYSTTEKELLAIVFALEKFRSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1298

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1299 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1358

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1359 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1418

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1419 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1478

[Close]

BLAST of Pay0001107 vs. NCBI nr
Match: XP_031392147.1 (uncharacterized protein LOC116204210 [Punica granatum])

HSP 1 Score: 652.9 bits (1683), Expect = 2.3e-183
Identity = 334/655 (50.99%), Postives = 416/655 (63.51%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLD
Sbjct: 939  LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFLD 998

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 999  GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1058

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1059 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1118

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1119 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1178

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1179 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1238

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LAIVFAL+KF+SY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1239 AAQRNYSTTEKELLAIVFALEKFQSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1298

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1299 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1358

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1359 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1418

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1419 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1478

[Close]

BLAST of Pay0001107 vs. NCBI nr
Match: XP_027171988.1 (uncharacterized protein LOC113771614 [Coffea eugenioides])

HSP 1 Score: 652.5 bits (1682), Expect = 3.0e-183
Identity = 332/609 (54.52%), Postives = 406/609 (66.67%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +TV   + GE+VP+R   GWR CIDYR+LN VTKKDHF LPF+DQM+ERLA R+Y+CFLD
Sbjct: 527  VTVEANQTGELVPVRKPTGWRHCIDYRRLNAVTKKDHFSLPFIDQMVERLACRAYYCFLD 586

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            GFS ++QI IA E Q+KTTFT                                       
Sbjct: 587  GFSGYFQIAIAPEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMVSIFSKYVEKIIE 646

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD +VYGDSFD CL +++LIL RCIETNLVLN++KCHFMV HGI+LGH+VSSKGIEV
Sbjct: 647  VFMDDFSVYGDSFDTCLDNLKLILIRCIETNLVLNWKKCHFMVEHGIVLGHIVSSKGIEV 706

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DKAKIDVI  LPYP  +++VR FLG  GFYRRFIK FSKI  PL  LLQKDV F  DD C
Sbjct: 707  DKAKIDVISALPYPVNVREVRSFLGHAGFYRRFIKNFSKIGAPLFQLLQKDVAFEFDDKC 766

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W+LP EIMC+AS+ A+GA LGQR+ K  H IYYA R LN
Sbjct: 767  ERAFDKLKELLTSPPIIQPPDWSLPFEIMCDASDQAVGAVLGQRVGKAAHVIYYASRALN 826

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A  NY+TTEKE LA++FAL+KFRSY++G+ VIV++DHAA+RYL++KK++KPRL+RW+LL
Sbjct: 827  GAQLNYSTTEKELLAVIFALEKFRSYLLGAKVIVFSDHAALRYLMTKKDAKPRLIRWILL 886

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L I+D++G+ N VADHLSRI   ++  P+R+ FP+EHLF  + Q PWYAD+VNYL
Sbjct: 887  LQEFDLEIRDKRGSENLVADHLSRIPVGEDKEPLRDAFPEEHLFSLHSQLPWYADLVNYL 946

Query: 421  -------------------------------------------VKEM------------- 480
                                                       V EM             
Sbjct: 947  VTGNFPAGLPKSKRDKLKSDAKYFIWDNPYLWKRCADQVMRRCVSEMESCDRCQRVGNIT 1006

Query: 481  ---------------------DFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVV 494
                                 DFMGPFP+SF +LYILLAVDYVSKWVEA  TRTNDS VV
Sbjct: 1007 RRDHMPQVPMIFVEIFDVWGIDFMGPFPTSFGFLYILLAVDYVSKWVEAKATRTNDSKVV 1066

[Close]

BLAST of Pay0001107 vs. NCBI nr
Match: XP_031393661.1 (uncharacterized protein LOC116205261 [Punica granatum])

HSP 1 Score: 652.1 bits (1681), Expect = 3.9e-183
Identity = 334/655 (50.99%), Postives = 415/655 (63.36%), Query Frame = 0


Query: 1    MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLD 60
            +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLD
Sbjct: 939  LTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFLD 998

Query: 61   GFSNFYQIPIACEHQKKTTFT--------------------------------------- 120
            G+S +YQI +A E Q+KTTFT                                       
Sbjct: 999  GYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCIE 1058

Query: 121  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEV 180
             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEV
Sbjct: 1059 VFMDDFTVHGDSFDRCLANLSKVLHRCIESNLVLNYEKCHFMVTHGIVLGHVISSRGIEV 1118

Query: 181  DKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNC 240
            DK+K+D+I  LPYP+ ++ +R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC
Sbjct: 1119 DKSKVDLILNLPYPSNIRSIRSFLGHAGFYRRFIKDFSKIAQPLCHLLQKDTDFVFGKNC 1178

Query: 241  KKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN 300
            ++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Sbjct: 1179 REAFDKLKELLTSAPIIQPPDWKLPFEIMTDASDYAIGAVLGQRMDKRSHVIYYASKTLD 1238

Query: 301  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLL 360
             A   Y+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LL
Sbjct: 1239 AAQRKYSTTEKELLAIVFALEKFRSYLLGSKIVVFTDHAALKFLLAKKESKPRLIRWILL 1298

Query: 361  LQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYL 420
            LQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPDEHLF    + PWYAD+VN++
Sbjct: 1299 LQEFDLEIKDRKGSENSVADHLSRLVRDEEPLPISDSFPDEHLFHVQGEEPWYADLVNFI 1358

Query: 421  VK---------------------------------------------------------- 480
            V                                                           
Sbjct: 1359 VTGTFPPGLTKARRNKLRSDSRYYIWDEPYLWKLCSDQVIRRCVPNNEIHSILAHCHSYA 1418

Query: 481  ------------------------------------------------------------ 495
                                                                        
Sbjct: 1419 CGGHFGPKRTARKIMDSGFYWETLFRDAHGFCKGCERCQRVGNISRRNEMPQVPMLFCEV 1478

[Close]

BLAST of Pay0001107 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-12
Identity = 42/131 (32.06%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 98  LSSIELILNRCIETNLVLNYEKCHFMVSHGIILG--HLVSSKGIEVDKAKIDVIQKLPYP 157
           ++ + ++L    +     N +KC F       LG  H++S +G+  D AK++ +   P P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 158 TCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVST 217
               ++R FLG  G+YRRF+K + KI  PLT LL+K+      +    AF  LK  + + 
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTL 120

Query: 218 PILQSPNWNLP 227
           P+L  P+  LP
Sbjct: 121 PVLALPDLKLP 130

The following BLAST results are available for this feature:

BLAST of Pay0001107 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	6.0e-54	34.60	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	7.8e-54	34.68	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	6.6e-53	32.01	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10394	7.3e-52	35.14	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
P0CT41	3.7e-43	30.90	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Pay0001107 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P8E7C5	1.3e-184	51.30	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116210952 PE=4 SV=1	[more]
A0A6P8E830	3.8e-184	51.15	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116212259 PE=4 SV=1	[more]
A0A6P8D4X0	1.1e-183	50.99	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116204210 PE=4 SV=1	[more]
A0A6P8DJV3	1.9e-183	50.99	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116205261 PE=4 SV=1	[more]
A0A6P6V9E5	6.6e-181	50.92	uncharacterized protein LOC113718514 OS=Coffea arabica OX=13443 GN=LOC113718514 ...	[more]

BLAST of Pay0001107 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031400978.1	2.7e-184	51.30	uncharacterized protein LOC116210952 [Punica granatum]	[more]
XP_031402684.1	7.8e-184	51.15	uncharacterized protein LOC116212259 [Punica granatum]	[more]
XP_031392147.1	2.3e-183	50.99	uncharacterized protein LOC116204210 [Punica granatum]	[more]
XP_027171988.1	3.0e-183	54.52	uncharacterized protein LOC113771614 [Coffea eugenioides]	[more]
XP_031393661.1	3.9e-183	50.99	uncharacterized protein LOC116205261 [Punica granatum]	[more]

BLAST of Pay0001107 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.2e-12	32.06	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 381..504 e-value: 9.0E-33 score: 115.2
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 225..325 e-value: 5.8E-28 score: 97.3
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 384..474 e-value: 4.3E-11 score: 43.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 356..507 score: 19.191778
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 17..141 e-value: 1.5E-35 score: 124.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 143..233 e-value: 2.0E-24 score: 87.4
None	No IPR available	PANTHER	PTHR24559:SF373	REVERSE TRANSCRIPTASE DOMAIN, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED	coord: 385..498
None	No IPR available	PANTHER	PTHR24559:SF373	REVERSE TRANSCRIPTASE DOMAIN, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED	coord: 74..383
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 74..383 coord: 385..498
None	No IPR available	CDD	cd01647	RT_LTR	coord: 11..134 e-value: 5.68477E-37 score: 132.719
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 228..347 e-value: 1.0693E-50 score: 167.284
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 17..329
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 384..499

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001107.1	Pay0001107.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding