Pay0001046 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001046
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Eukaryotic translation initiation factor 3 subunit M
Location	chr01: 19888425 .. 19888990 (+)
RNA-Seq Expression	Pay0001046
Synteny	Pay0001046

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTAAAATTCTCCACTTTAGTAATAACTTTAATAATTTCTAATTAGAGCTAAATTTGTAACTCATACTCTGGATGTATTCCTGGATCTGGTGTAGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATAATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGGTTTGTGCTATTCTCTATCTAGACCGCCACATTACACTTCTTTGGTTAGGCATAGCTTATTCTGTACTAATATAATAACTCTTTTGATGTTCATGTGCAGCCGGTACTGA

mRNA sequence

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATAATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGCCGGTACTGA

Coding sequence (CDS)

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATAATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGCCGGTACTGA

Protein sequence

MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVSRY

Homology

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BLAST of Pay0001046 vs. ExPASy Swiss-Prot
Match: Q54KZ8 (Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum OX=44689 GN=eif3m PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-21
Identity = 53/123 (43.09%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 1   MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRL 60
           +PAV  LE    +  SL Y+L+KIF T++LD++++FQ  N + L + GL ++DC+ K+RL
Sbjct: 237 LPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTIGLSNDDCLQKIRL 296

Query: 61  LSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVV 120
           LSL  L ++E +++PY+LI        +LQI++NEVE+WV+ A+   L+D K+DQ+N +V
Sbjct: 297 LSLATL-TSEQSKVPYSLIS------KMLQIDENEVEMWVINAMEGDLLDAKLDQLNRIV 352

Query: 121 IVS 122
            V+
Sbjct: 357 NVN 352

[Close]

BLAST of Pay0001046 vs. ExPASy Swiss-Prot
Match: B4MY75 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila willistoni OX=7260 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.6e-11
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY+EF   +   + S GL HE  + KMRLL+ + L  + +     
Sbjct: 237 LIHDLLSIFVSEKLPAYVEFYEEHKEFVNSQGLNHEQNMKKMRLLTFMQLAESNAEMSFE 296

Query: 75  ALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVS 122
           AL K        LQI +NEVE +V++ + +KL+  ++DQ N  V +S
Sbjct: 297 ALTK-------ELQITENEVEPFVIEVLKTKLVRARLDQANRKVHIS 336

[Close]

BLAST of Pay0001046 vs. ExPASy Swiss-Prot
Match: Q7JVI3 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila melanogaster OX=7227 GN=eIF3m PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10
Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVS 122
            L K        LQIN++EVE +V++ + +KL+  ++DQ N+ V +S
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHIS 336

[Close]

BLAST of Pay0001046 vs. ExPASy Swiss-Prot
Match: B4HR14 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila sechellia OX=7238 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10
Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVS 122
            L K        LQIN++EVE +V++ + +KL+  ++DQ N+ V +S
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHIS 336

[Close]

BLAST of Pay0001046 vs. ExPASy Swiss-Prot
Match: B4QFD2 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila simulans OX=7240 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10
Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVS 122
            L K        LQIN++EVE +V++ + +KL+  ++DQ N+ V +S
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHIS 336

[Close]

BLAST of Pay0001046 vs. ExPASy TrEMBL
Match: A0A5A7UE08 (Eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001100 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.5e-59
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 93  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 152

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 153 LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 212

Query: 121 SRY 124
           SRY
Sbjct: 213 SRY 215

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BLAST of Pay0001046 vs. ExPASy TrEMBL
Match: A0A1S3CSW1 (eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504517 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.5e-59
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

Query: 121 SRY 124
           SRY
Sbjct: 121 SRY 123

[Close]

BLAST of Pay0001046 vs. ExPASy TrEMBL
Match: A0A1S4E653 (eukaryotic translation initiation factor 3 subunit M-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504517 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.3e-57
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

[Close]

BLAST of Pay0001046 vs. ExPASy TrEMBL
Match: A0A5A7TCS8 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002380 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52
Identity = 119/142 (83.80%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGV---------TC-----------VLLVLQINDNEVELWVVK 120
           LVDLGSNESARIPYALIK           TC           VLLVLQIND+EVELWVVK
Sbjct: 304 LVDLGSNESARIPYALIKDTLQVKRNFRFTCFSFCVFFFLMWVLLVLQINDDEVELWVVK 363

Query: 121 AITSKLIDCKMDQMNEVVIVSR 123
           AITSKLIDCKMDQMNEVVIVSR
Sbjct: 364 AITSKLIDCKMDQMNEVVIVSR 385

[Close]

BLAST of Pay0001046 vs. ExPASy TrEMBL
Match: A0A5D3BNN4 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002400 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.2e-52
Identity = 113/122 (92.62%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIK        LQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 304 LVDLGSNESARIPYALIKD------TLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 359

Query: 121 SR 123
           SR
Sbjct: 364 SR 359

[Close]

BLAST of Pay0001046 vs. NCBI nr
Match: KAA0053298.1 (eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 7.2e-59
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 93  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 152

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 153 LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 212

Query: 121 SRY 124
           SRY
Sbjct: 213 SRY 215

[Close]

BLAST of Pay0001046 vs. NCBI nr
Match: XP_008467080.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 7.2e-59
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

Query: 121 SRY 124
           SRY
Sbjct: 121 SRY 123

[Close]

BLAST of Pay0001046 vs. NCBI nr
Match: XP_016903699.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucumis melo])

HSP 1 Score: 230.7 bits (587), Expect = 6.7e-57
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

[Close]

BLAST of Pay0001046 vs. NCBI nr
Match: KAA0039431.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52
Identity = 119/142 (83.80%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGV---------TC-----------VLLVLQINDNEVELWVVK 120
           LVDLGSNESARIPYALIK           TC           VLLVLQIND+EVELWVVK
Sbjct: 304 LVDLGSNESARIPYALIKDTLQVKRNFRFTCFSFCVFFFLMWVLLVLQINDDEVELWVVK 363

Query: 121 AITSKLIDCKMDQMNEVVIVSR 123
           AITSKLIDCKMDQMNEVVIVSR
Sbjct: 364 AITSKLIDCKMDQMNEVVIVSR 385

[Close]

BLAST of Pay0001046 vs. NCBI nr
Match: TYK00620.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-51
Identity = 113/122 (92.62%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIK        LQIND+EVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 304 LVDLGSNESARIPYALIKD------TLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 359

Query: 121 SR 123
           SR
Sbjct: 364 SR 359

[Close]

BLAST of Pay0001046 vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-42
Identity = 88/121 (72.73%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 2   PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSL 61
           PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSL
Sbjct: 245 PAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMRLLSL 304

Query: 62  VDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVS 121
           VDL S++S +IPYA IK        LQ+ND EVELWVVKAIT+KL+ CKMDQMN+VVIVS
Sbjct: 305 VDLASDDSGKIPYASIKN------TLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVS 359

Query: 122 R 123
           R
Sbjct: 365 R 359

[Close]

BLAST of Pay0001046 vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 167.5 bits (423), Expect = 6.5e-42
Identity = 85/122 (69.67%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLS
Sbjct: 244 LPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDL S+ES +IPY  IK        LQ+N+ +VELW+VKAIT+KLI+CKMDQMN+V+IV
Sbjct: 304 LVDLASDESGKIPYTSIKD------TLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 359

Query: 121 SR 123
           SR
Sbjct: 364 SR 359

[Close]

BLAST of Pay0001046 vs. TAIR 10
Match: AT5G15610.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.5e-41
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 2   PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSL 61
           PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSL
Sbjct: 245 PAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMRLLSL 304

Query: 62  VDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 121
           VDL S++S +IPYA IK        LQ+ND EVELWVVKAIT+KL+ CKMDQMN+VVIV
Sbjct: 305 VDLASDDSGKIPYASIKN------TLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIV 357

[Close]

BLAST of Pay0001046 vs. TAIR 10
Match: AT3G02200.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 164.1 bits (414), Expect = 7.2e-41
Identity = 83/120 (69.17%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLS
Sbjct: 244 LPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDL S+ES +IPY  IK        LQ+N+ +VELW+VKAIT+KLI+CKMDQMN+V+IV
Sbjct: 304 LVDLASDESGKIPYTSIKD------TLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 357

The following BLAST results are available for this feature:

BLAST of Pay0001046 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KZ8	4.7e-21	43.09	Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum...	[more]
B4MY75	7.6e-11	36.45	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila willistoni OX...	[more]
Q7JVI3	4.9e-10	34.58	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila melanogaster ...	[more]
B4HR14	4.9e-10	34.58	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila sechellia OX=...	[more]
B4QFD2	4.9e-10	34.58	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila simulans OX=7...	[more]

BLAST of Pay0001046 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UE08	3.5e-59	99.19	Eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis ...	[more]
A0A1S3CSW1	3.5e-59	99.19	eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis ...	[more]
A0A1S4E653	3.3e-57	99.17	eukaryotic translation initiation factor 3 subunit M-like isoform X1 OS=Cucumis ...	[more]
A0A5A7TCS8	4.1e-52	83.80	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]
A0A5D3BNN4	9.2e-52	92.62	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]

BLAST of Pay0001046 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053298.1	7.2e-59	99.19	eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis me...	[more]
XP_008467080.1	7.2e-59	99.19	PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 ...	[more]
XP_016903699.1	6.7e-57	99.17	PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 ...	[more]
KAA0039431.1	8.5e-52	83.80	eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]	[more]
TYK00620.1	1.9e-51	92.62	eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]	[more]

BLAST of Pay0001046 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15610.2	1.7e-42	72.73	Proteasome component (PCI) domain protein	[more]
AT3G02200.2	6.5e-42	69.67	Proteasome component (PCI) domain protein	[more]
AT5G15610.1	2.5e-41	72.27	Proteasome component (PCI) domain protein	[more]
AT3G02200.1	7.2e-41	69.17	Proteasome component (PCI) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 17..122 e-value: 1.0E-9 score: 38.9
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 1..123 score: 14.906488
None	No IPR available	PANTHER	PTHR15350:SF2	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT M	coord: 1..123
None	No IPR available	PANTHER	PTHR15350	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001046.1	Pay0001046.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity