Pay0000984 (gene) Melon (Payzawat) v1

Overview


Name	Pay0000984
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Polypyrimidine tract-binding protein-like protein 2
Location	chr09: 23893681 .. 23896216 (+)
RNA-Seq Expression	Pay0000984
Synteny	Pay0000984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACATCATCAACAACAATCCCTTTCTCTCTCCCACATCTCACCCTCTCTCTCTAAACTCATACACCGATAATCTCATTTTCCCCAAAAGCTGCCAGTGATTTTCCATTTTCCATTACCAAATCCAATCCCAGAATCGGAGTTGCCATGGTCAAGCTAGTCTCCGCTAGAGATTTCAGGGTCTACGGCCCTCGGCCGCTCCGGAACCGGGCGGAGTACATCAATGCCGGCCTCTATTTGTTCGCCACTATCCTCCTTCTCGGTGGCTTTGTTGCTCAGCTTTCCCGAGAACCCAAATCTGGATTGGCCCTAATTCTTCTCGCCACTTCCCTAATTGCCATCGTTAATTTGCACGATCTCTTCGCCCATCTCGCCGGAATTGATCATCGGTTGCCACTGCTTGTTCAGTACGATGCCCAGCTTTTTTTTGTGGAATTTGCTGTTCCGTTTCTTCAGGCGATTGGGTCGCTGCTCTTGTCTTTGGCTGCACTGTTTCTTCTAATTCAGGTTCCCATTCATCGTTTGCTTGCTTTACTCTGCTTAATTTAGTTTTCTAGGTTAATAGTATACCATTTTTGCTTTGGAATTTCTAACAAAATTGCACTTGTCGATCTTGATGAGAAATTGTTTTGAGGGGCTGGTCAATCGGTTTTCTGAGATGTTCTGTGTGCTAACTCTTGTTATCCTCTGTCATAAGTCTTGGATTTTAGAATCAAAATCAGCAACCCTTTTAGAACCATCCACTTATTTGGATGGTTTCAAGTTTCAGTCAATGATTTCAGTGCCATTTTCCCTGCCATTGGTTGTGATAATTTTGAGCAATGAGTGACTGAGTGAGTTATGTGAGGCCTGTTGGCAACATTTCTGCTACTCATTTCTTCAATTTTTCTTTCAAGAAATAAAAGCAAAACTGTGTTTGGAAATTGTTTCTGTTTCCTACTGAAATTTGAAAGAACAAAAAAGCATAAGATGGGTAATTTTGGAGGGCATTATTGTGTAGTTTTTTCAGCAATACTCCCAAATTTCAAAATTTCAATTATAAACAAAAGAACAAGATGCAGTCGTTTCAGTAATGTTTAATTGTTCCAATAGTGTTGTTGTAAGTACTTGACAATGTTTTGGACTCACCTGACTTTGTTACATGCTATCACTGGAGGCCCTCCTCACACTCGGGACACAGAATTAAAAAACCCCGTGTCAAAGATCAAAAGCTATGGCGAAATCTAGAAAATGCTATCCTCGGTTTCAATGATTGCACATTGTAGGAAAACTGTTTGATCAACTTCATTCCGTTCCTGATGTTAACTCTTTACAGCATTCATGTTTGTTGTGTTGTCCTCCTTTTGCATTTTACAAGAGCTGCCATCCAATTTGCTGCTGCAGGAAAAGAAGGGACACGATTATGACAAACTAGAAAAGCATGCTTCAAATATGCTTATTGCGGGTCCTGCCTTATGGATGCTTGGATCGATCCACAACTCATGCCAAATCTATGAAAGGGCCGATGGACATGTTCAAATCTTGCAGCAGAGTGTCCATATTCCATTTTTAATAGGAAGCTTACTGTTTTTTGTTGCAGCAGTTCTCAATAGCTACGAGCAAGTTGGGTTAGCCCATCATGGTCTCAAACTTCTGGTACGTGACATTGAATATATACATTTTACTGTCAATAGCGAACAATTGATTCTGACTTGCCTTTCAAAATACTTAGTCAAGAAACGAAAAAGTTGTCACAATGATTATGGTTCCACGCTCAAGAATAATAGAATGTCAATGACGTCAGGTACAGAAATCAAGATACATTGGTGATCGTGAAACTCTAAAGCTTAAGAACACCAAGTTAGAACTATAACCACAGTTCATATTGTTGTTTTGGTATGAATTCAAATTTTAAACAGTTTGATGAATATTTTAGTTAAAAGCAACAAACAAAAGTTTGATATTCATCTAACAAAATGGTTGCATAATATTTGCTTCATGATGAATGGCATTTTAATGAAGTATCAAGTGTTGACGAGGGTGTGAATGCAGGGCAAAAACTGGATTTGGTTAGGTATCTTTGGGAGCTTATCACTCTTGTTGGGCGGATTGGCGAACGTGCTTAAAGTGTTCAAGATGCAGCAGTTCGAGGGACTACGACTTGAGAAGCTTCGAGGAGGGGCAAACGAGCGGCTTCTTGGGGAAAGAGAAGGCAGGATTCCTCTGATTCTAGAGGATCAGGGTAGGAGAAAACGACACTCGGATGAAGAAAGAGGAAGGGAAGCCAGACCGACGCCTTATAAAGATGTACTCGTAGGCCAATCACCCTGAAGTTCTCTTTCCCTCTTCCACTTCCATTACTGACCCCTGCAACTGAGCTTGATTAATCTCTGGAGAGTATCTTTTGTTACAGAATATTGTGTGCATTTACATATAGAATTAATGTGATTATGATTATGATCATGATTGATGAGCAAGTTCGTAGAAGTCCGTAGAAGTAATAGAATACTGTTGATATGAATTTGATATCTGATCTTGTTTGGTTGTTTCTGTTTGG

mRNA sequence

AACACATCATCAACAACAATCCCTTTCTCTCTCCCACATCTCACCCTCTCTCTCTAAACTCATACACCGATAATCTCATTTTCCCCAAAAGCTGCCAGTGATTTTCCATTTTCCATTACCAAATCCAATCCCAGAATCGGAGTTGCCATGGTCAAGCTAGTCTCCGCTAGAGATTTCAGGGTCTACGGCCCTCGGCCGCTCCGGAACCGGGCGGAGTACATCAATGCCGGCCTCTATTTGTTCGCCACTATCCTCCTTCTCGGTGGCTTTGTTGCTCAGCTTTCCCGAGAACCCAAATCTGGATTGGCCCTAATTCTTCTCGCCACTTCCCTAATTGCCATCGTTAATTTGCACGATCTCTTCGCCCATCTCGCCGGAATTGATCATCGGTTGCCACTGCTTGTTCAGTACGATGCCCAGCTTTTTTTTGTGGAATTTGCTGTTCCGTTTCTTCAGGCGATTGGGTCGCTGCTCTTGTCTTTGGCTGCACTGTTTCTTCTAATTCAGGAAAAGAAGGGACACGATTATGACAAACTAGAAAAGCATGCTTCAAATATGCTTATTGCGGGTCCTGCCTTATGGATGCTTGGATCGATCCACAACTCATGCCAAATCTATGAAAGGGCCGATGGACATGTTCAAATCTTGCAGCAGAGTGTCCATATTCCATTTTTAATAGGAAGCTTACTGTTTTTTGTTGCAGCAGTTCTCAATAGCTACGAGCAAGTTGGGTTAGCCCATCATGGTCTCAAACTTCTGGGCAAAAACTGGATTTGGTTAGGTATCTTTGGGAGCTTATCACTCTTGTTGGGCGGATTGGCGAACGTGCTTAAAGTGTTCAAGATGCAGCAGTTCGAGGGACTACGACTTGAGAAGCTTCGAGGAGGGGCAAACGAGCGGCTTCTTGGGGAAAGAGAAGGCAGGATTCCTCTGATTCTAGAGGATCAGGGTAGGAGAAAACGACACTCGGATGAAGAAAGAGGAAGGGAAGCCAGACCGACGCCTTATAAAGATGTACTCGTAGGCCAATCACCCTGAAGTTCTCTTTCCCTCTTCCACTTCCATTACTGACCCCTGCAACTGAGCTTGATTAATCTCTGGAGAGTATCTTTTGTTACAGAATATTGTGTGCATTTACATATAGAATTAATGTGATTATGATTATGATCATGATTGATGAGCAAGTTCGTAGAAGTCCGTAGAAGTAATAGAATACTGTTGATATGAATTTGATATCTGATCTTGTTTGGTTGTTTCTGTTTGG

Coding sequence (CDS)

ATGGTCAAGCTAGTCTCCGCTAGAGATTTCAGGGTCTACGGCCCTCGGCCGCTCCGGAACCGGGCGGAGTACATCAATGCCGGCCTCTATTTGTTCGCCACTATCCTCCTTCTCGGTGGCTTTGTTGCTCAGCTTTCCCGAGAACCCAAATCTGGATTGGCCCTAATTCTTCTCGCCACTTCCCTAATTGCCATCGTTAATTTGCACGATCTCTTCGCCCATCTCGCCGGAATTGATCATCGGTTGCCACTGCTTGTTCAGTACGATGCCCAGCTTTTTTTTGTGGAATTTGCTGTTCCGTTTCTTCAGGCGATTGGGTCGCTGCTCTTGTCTTTGGCTGCACTGTTTCTTCTAATTCAGGAAAAGAAGGGACACGATTATGACAAACTAGAAAAGCATGCTTCAAATATGCTTATTGCGGGTCCTGCCTTATGGATGCTTGGATCGATCCACAACTCATGCCAAATCTATGAAAGGGCCGATGGACATGTTCAAATCTTGCAGCAGAGTGTCCATATTCCATTTTTAATAGGAAGCTTACTGTTTTTTGTTGCAGCAGTTCTCAATAGCTACGAGCAAGTTGGGTTAGCCCATCATGGTCTCAAACTTCTGGGCAAAAACTGGATTTGGTTAGGTATCTTTGGGAGCTTATCACTCTTGTTGGGCGGATTGGCGAACGTGCTTAAAGTGTTCAAGATGCAGCAGTTCGAGGGACTACGACTTGAGAAGCTTCGAGGAGGGGCAAACGAGCGGCTTCTTGGGGAAAGAGAAGGCAGGATTCCTCTGATTCTAGAGGATCAGGGTAGGAGAAAACGACACTCGGATGAAGAAAGAGGAAGGGAAGCCAGACCGACGCCTTATAAAGATGTACTCGTAGGCCAATCACCCTGA

Protein sequence

MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLATSLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQEKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSLLFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLRLEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP

Homology

[Close]

BLAST of Pay0000984 vs. ExPASy TrEMBL
Match: A0A1S3AUZ4 (LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis melo OX=3656 GN=LOC103482951 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.5e-161
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 296

[Close]

BLAST of Pay0000984 vs. ExPASy TrEMBL
Match: A0A5D3C6J8 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00600 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.2e-160
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SLIAIVNLHDLFAHLAGID+RLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 296

[Close]

BLAST of Pay0000984 vs. ExPASy TrEMBL
Match: A0A5A7TLW2 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00560 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.0e-157
Identity = 290/291 (99.66%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SLIAIVNLHDLFAHLAGID+RLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVL 292
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVL
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVL 291

[Close]

BLAST of Pay0000984 vs. ExPASy TrEMBL
Match: A0A0A0KJH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139580 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.1e-155
Identity = 288/297 (96.97%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPR +RNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRSVRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SL AIVNLHDLFAHLAGID+RLPLLVQYDAQLFFVEFAVPFLQAIGSLLLS AALFLLIQ
Sbjct: 61  SLFAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSFAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDY KLEKHASNMLIAGPALWMLGSIHNSCQIYERAD HVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYHKLEKHASNMLIAGPALWMLGSIHNSCQIYERADAHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLS LLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSFLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGR-EARPTPYKDVLVGQSP 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGR EARPTPYKDVLVGQSP
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGRVEARPTPYKDVLVGQSP 297

[Close]

BLAST of Pay0000984 vs. ExPASy TrEMBL
Match: A0A6J1K7T0 (uncharacterized protein LOC111490949 OS=Cucurbita maxima OX=3661 GN=LOC111490949 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.3e-138
Identity = 256/295 (86.78%), Postives = 271/295 (91.86%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKL SARDFR YGPR  R+RAEYINAGLYLFATILLLGGFVAQLSRE KSGLALI+LA 
Sbjct: 1   MVKLASARDFRAYGPRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           +LI IVN+HDLFAHLAGID+RLPLL QYD QL FVEF+VPFLQAIGSLLLSL  LFLLIQ
Sbjct: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFSVPFLQAIGSLLLSLGTLFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           E+KGHDY KLEKH  +MLIAGPALW+LGSI NSCQIYERADGHVQILQQSVHIPFLIGSL
Sbjct: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLN +EQ GLAH GLKLLGKNW+W GIFGSLSLLLGGL NV KVFKMQQF+GLR
Sbjct: 181 LFFVAAVLNGFEQAGLAHRGLKLLGKNWVWFGIFGSLSLLLGGLGNVHKVFKMQQFDGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQS 296
           LEKLRGGANERLLGEREGRIPLILEDQGRRKR SDEE+GR+A PTPYKDVLVGQ+
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQASPTPYKDVLVGQT 295

[Close]

BLAST of Pay0000984 vs. NCBI nr
Match: XP_008437579.1 (PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 9.2e-161
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 296

[Close]

BLAST of Pay0000984 vs. NCBI nr
Match: TYK05966.1 (polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 574.7 bits (1480), Expect = 4.6e-160
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SLIAIVNLHDLFAHLAGID+RLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQSP 296

[Close]

BLAST of Pay0000984 vs. NCBI nr
Match: KAA0042561.1 (polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 564.3 bits (1453), Expect = 6.2e-157
Identity = 290/291 (99.66%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SLIAIVNLHDLFAHLAGID+RLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVL 292
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVL
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVL 291

[Close]

BLAST of Pay0000984 vs. NCBI nr
Match: XP_031741225.1 (polypyrimidine tract-binding protein homolog 2 [Cucumis sativus])

HSP 1 Score: 556.2 bits (1432), Expect = 1.7e-154
Identity = 288/297 (96.97%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPR +RNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRSVRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SL AIVNLHDLFAHLAGID+RLPLLVQYDAQLFFVEFAVPFLQAIGSLLLS AALFLLIQ
Sbjct: 61  SLFAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSFAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDY KLEKHASNMLIAGPALWMLGSIHNSCQIYERAD HVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYHKLEKHASNMLIAGPALWMLGSIHNSCQIYERADAHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLS LLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSFLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGR-EARPTPYKDVLVGQSP 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGR EARPTPYKDVLVGQSP
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGRVEARPTPYKDVLVGQSP 297

[Close]

BLAST of Pay0000984 vs. NCBI nr
Match: KGN49880.1 (hypothetical protein Csa_000601 [Cucumis sativus])

HSP 1 Score: 556.2 bits (1432), Expect = 1.7e-154
Identity = 288/297 (96.97%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60
           MVKLVSARDFRVYGPR +RNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT
Sbjct: 1   MVKLVSARDFRVYGPRSVRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120
           SL AIVNLHDLFAHLAGID+RLPLLVQYDAQLFFVEFAVPFLQAIGSLLLS AALFLLIQ
Sbjct: 61  SLFAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSFAALFLLIQ 120

Query: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180
           EKKGHDY KLEKHASNMLIAGPALWMLGSIHNSCQIYERAD HVQILQQSVHIPFLIGSL
Sbjct: 121 EKKGHDYHKLEKHASNMLIAGPALWMLGSIHNSCQIYERADAHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240
           LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLS LLGGLANVLKVFKMQQFEGLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSFLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGR-EARPTPYKDVLVGQSP 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGR EARPTPYKDVLVGQSP
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGRVEARPTPYKDVLVGQSP 297

[Close]

BLAST of Pay0000984 vs. TAIR 10
Match: AT5G24130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 336.3 bits (861), Expect = 2.5e-92
Identity = 184/316 (58.23%), Postives = 220/316 (69.62%), Query Frame = 0


Query: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQ-LSREPKSGLALILLA 60
           MVKL +AR+ R YGPR  R+RAEYINAGLYLFAT++L+GGF A   S EP+SGL LILLA
Sbjct: 1   MVKLATAREIRTYGPRLGRSRAEYINAGLYLFATVVLIGGFTATGFSWEPRSGLVLILLA 60

Query: 61  TSLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLI 120
             LI  VN+HDL AHLAGID+RL L+ +YD QL  VEFAVP +Q  GS++  L   F+  
Sbjct: 61  LVLITAVNVHDLVAHLAGIDYRLRLM-EYDLQLGLVEFAVPLVQIAGSVVFFLGIFFVFH 120

Query: 121 QEKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGS 180
           Q +    Y   E HA N+LIAGP LW++GSIHNSCQIYERAD HVQILQQ V+IPFL+GS
Sbjct: 121 QAETKRGYSGREHHALNLLIAGPLLWLIGSIHNSCQIYERADSHVQILQQCVYIPFLVGS 180

Query: 181 LLFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGL 240
           LLF V+AVLNS +  G +  GLKLLG+ WIWLGI G++ L +GGL NV+KVF   Q  GL
Sbjct: 181 LLFLVSAVLNSLDISGSSRSGLKLLGERWIWLGISGAICLFVGGLLNVVKVFNFVQISGL 240

Query: 241 RLEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREAR---------------- 295
           RLEKLRGGA +RLL  REG +PL+ E++  RK  +D E    A+                
Sbjct: 241 RLEKLRGGAQDRLLEGREGYLPLVAEEERIRKMEADHEASSRAKPRAHTTSKAGEGATET 300

The following BLAST results are available for this feature:

BLAST of Pay0000984 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0000984 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUZ4	4.5e-161	100.00	LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis m...	[more]
A0A5D3C6J8	2.2e-160	99.66	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7TLW2	3.0e-157	99.66	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]
A0A0A0KJH6	8.1e-155	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139580 PE=4 SV=1	[more]
A0A6J1K7T0	5.3e-138	86.78	uncharacterized protein LOC111490949 OS=Cucurbita maxima OX=3661 GN=LOC111490949...	[more]

BLAST of Pay0000984 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437579.1	9.2e-161	100.00	PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [...	[more]
TYK05966.1	4.6e-160	99.66	polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa]	[more]
KAA0042561.1	6.2e-157	99.66	polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa]	[more]
XP_031741225.1	1.7e-154	96.97	polypyrimidine tract-binding protein homolog 2 [Cucumis sativus]	[more]
KGN49880.1	1.7e-154	96.97	hypothetical protein Csa_000601 [Cucumis sativus]	[more]

BLAST of Pay0000984 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24130.1	2.5e-92	58.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..296
None	No IPR available	PANTHER	PTHR34967	OS02G0257200 PROTEIN	coord: 1..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0000984.1	Pay0000984.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding