Pay0000975 (gene) Melon (Payzawat) v1

Overview


Name	Pay0000975
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr02: 193955 .. 194254 (-)
RNA-Seq Expression	Pay0000975
Synteny	Pay0000975

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGAAACAGGCAGAAAAAGTCTCACAATTCTTCCTTTTCCTTCTTGGGGCTCTTCAAATCAAAAAGATCAGGTAGAAAAGGAGATCATTATTATGATCATCAGCAACAAGGCAACAGCTGGGAGGACTTCTCTTGCCCTAGCAAGGTGTGGCCGAGCGACGCAGATAAGTGCCACCGATGGGTGGCCGAGCCTGGCATCGACCGAAAAGCCAAAGATTACATTGACAGGATTCATCGTAACCGCGTCTTCGAAACACAACGCCAAACCGTCACCCTTAATCCTCCCGAGTCCTGA

mRNA sequence

ATGGGAGGAAACAGGCAGAAAAAGTCTCACAATTCTTCCTTTTCCTTCTTGGGGCTCTTCAAATCAAAAAGATCAGGTAGAAAAGGAGATCATTATTATGATCATCAGCAACAAGGCAACAGCTGGGAGGACTTCTCTTGCCCTAGCAAGGTGTGGCCGAGCGACGCAGATAAGTGCCACCGATGGGTGGCCGAGCCTGGCATCGACCGAAAAGCCAAAGATTACATTGACAGGATTCATCGTAACCGCGTCTTCGAAACACAACGCCAAACCGTCACCCTTAATCCTCCCGAGTCCTGA

Coding sequence (CDS)

ATGGGAGGAAACAGGCAGAAAAAGTCTCACAATTCTTCCTTTTCCTTCTTGGGGCTCTTCAAATCAAAAAGATCAGGTAGAAAAGGAGATCATTATTATGATCATCAGCAACAAGGCAACAGCTGGGAGGACTTCTCTTGCCCTAGCAAGGTGTGGCCGAGCGACGCAGATAAGTGCCACCGATGGGTGGCCGAGCCTGGCATCGACCGAAAAGCCAAAGATTACATTGACAGGATTCATCGTAACCGCGTCTTCGAAACACAACGCCAAACCGTCACCCTTAATCCTCCCGAGTCCTGA

Protein sequence

MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNPPES

Homology

[Close]

BLAST of Pay0000975 vs. ExPASy TrEMBL
Match: A0A0A0LY99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560730 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.9e-48
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60
           MGGNRQKKSHNSSFSFLGLFKSKRS RKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH
Sbjct: 1   MGGNRQKKSHNSSFSFLGLFKSKRSVRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60

Query: 61  RWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNPPES 100
           RWVAEPGIDRKAKDYIDRIHRNRVFET RQTVTL PPES
Sbjct: 61  RWVAEPGIDRKAKDYIDRIHRNRVFETPRQTVTL-PPES 98

[Close]

BLAST of Pay0000975 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.3e-27
Identity = 69/97 (71.13%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWED-FSCPSKVWPSDADKC 60
          MGGNRQKKSH SSFS    FKSKR GRKGDH YDH   G +W D     +KVWPSD DK 
Sbjct: 1  MGGNRQKKSH-SSFSIFSFFKSKR-GRKGDH-YDH---GGAWPDEMPRSNKVWPSDEDKA 60

Query: 61 HRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNP 97
          H W+AEPGIDRKAKDYIDRI+RNRVFE++RQTVT++P
Sbjct: 61 HHWIAEPGIDRKAKDYIDRIYRNRVFESERQTVTISP 91

[Close]

BLAST of Pay0000975 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-26
Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSW-EDFSCPSKVWPSDADKC 60
          MGGNRQKKSH SSFS    FKS+R GRKGDH YDH   G +W ++    +KVWPSD DK 
Sbjct: 1  MGGNRQKKSH-SSFSIFSFFKSRR-GRKGDH-YDH---GGAWLDEMPRSNKVWPSDEDKA 60

Query: 61 HRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNP 97
          H WVAEPGIDRKAKDYIDRI+RNRVFE++RQTVT++P
Sbjct: 61 HHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTISP 91

[Close]

BLAST of Pay0000975 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60
          MGG+ ++K  +SSFS    FKSKR GRKGD Y    + G +WED    SKVWPSD DK +
Sbjct: 1  MGGSHRQKKTHSSFSIFSFFKSKR-GRKGDVY----EHGTNWEDVPSSSKVWPSDEDKGY 60

Query: 61 RWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNP 97
          RWVAEPGIDRKAKDYIDRI++NRVFET+RQTVT++P
Sbjct: 61 RWVAEPGIDRKAKDYIDRIYKNRVFETERQTVTIHP 91

[Close]

BLAST of Pay0000975 vs. ExPASy TrEMBL
Match: A0A0A0K8V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.5e-24
Identity = 66/95 (69.47%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSW-EDFSCPSKVWPSDADKC 60
          MGG++ KKSH SSFSF    KSK S RKGDH YDH   G SW ++ S   KVWPSD DK 
Sbjct: 1  MGGHKHKKSH-SSFSFFSFLKSKWS-RKGDH-YDH---GGSWLDEKSRSGKVWPSDEDKA 60

Query: 61 HRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTL 95
          H WVAEPGIDRKAKDYIDRI+RNRVFE++RQTVT+
Sbjct: 61 HHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTI 89

[Close]

BLAST of Pay0000975 vs. NCBI nr
Match: KGN65989.1 (hypothetical protein Csa_006868 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 6.0e-48
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60
           MGGNRQKKSHNSSFSFLGLFKSKRS RKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH
Sbjct: 1   MGGNRQKKSHNSSFSFLGLFKSKRSVRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60

Query: 61  RWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNPPES 100
           RWVAEPGIDRKAKDYIDRIHRNRVFET RQTVTL PPES
Sbjct: 61  RWVAEPGIDRKAKDYIDRIHRNRVFETPRQTVTL-PPES 98

[Close]

BLAST of Pay0000975 vs. NCBI nr
Match: KAG6588556.1 (hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-29
Identity = 71/96 (73.96%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60
          MGGN+ KKSH SSFSF G FKSKR+ RKG+H Y+H       ++ SCP KVWPSDADKCH
Sbjct: 1  MGGNKHKKSH-SSFSFFGFFKSKRA-RKGEH-YEH-------DELSCPRKVWPSDADKCH 60

Query: 61 RWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNP 97
          RWVAEPGIDRKAKDYIDRIHRNRV ET+RQTVT+ P
Sbjct: 61 RWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAP 86

[Close]

BLAST of Pay0000975 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-26
Identity = 69/97 (71.13%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWED-FSCPSKVWPSDADKC 60
          MGGNRQKKSH SSFS    FKSKR GRKGDH YDH   G +W D     +KVWPSD DK 
Sbjct: 1  MGGNRQKKSH-SSFSIFSFFKSKR-GRKGDH-YDH---GGAWPDEMPRSNKVWPSDEDKA 60

Query: 61 HRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNP 97
          H W+AEPGIDRKAKDYIDRI+RNRVFE++RQTVT++P
Sbjct: 61 HHWIAEPGIDRKAKDYIDRIYRNRVFESERQTVTISP 91

[Close]

BLAST of Pay0000975 vs. NCBI nr
Match: KGN45873.1 (hypothetical protein Csa_005148 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60
          MGG+ ++K  +SSFS    FKSKR GRKGD Y    + G +WED    SKVWPSD DK +
Sbjct: 1  MGGSHRQKKTHSSFSIFSFFKSKR-GRKGDVY----EHGTNWEDVPSSSKVWPSDEDKGY 60

Query: 61 RWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNP 97
          RWVAEPGIDRKAKDYIDRI++NRVFET+RQTVT++P
Sbjct: 61 RWVAEPGIDRKAKDYIDRIYKNRVFETERQTVTIHP 91

[Close]

BLAST of Pay0000975 vs. NCBI nr
Match: KAG6590516.1 (hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25
Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1  MGGNRQKKSHNSSFSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKCH 60
          MGGNR KK+ +SSFSFL  FKSKRS RKGD  YDH   G++W+D S PSKVWPSDADK H
Sbjct: 1  MGGNRHKKA-SSSFSFLAFFKSKRS-RKGDG-YDH---GSTWDDLSYPSKVWPSDADKHH 60

Query: 61 RWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLNP 97
           WVAEPGIDRKA DYI RIH +RV ET+ QTVT+ P
Sbjct: 61 HWVAEPGIDRKADDYIKRIHLSRVLETKNQTVTVAP 90

[Close]

BLAST of Pay0000975 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 1  MGGNRQKKSHNSS-FSFLGLFKSKRSGRKGDHYYDHQQQGNSWEDFSCPSKVWPSDADKC 60
          MGG  + +SH+S  FS    FK++RS R         +   SW+DF    K   SD DK 
Sbjct: 1  MGG--KNRSHSSKRFSLFSFFKTRRSHR--------VEADGSWDDFGYTRKAMASDEDKR 60

Query: 61 HRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVT 94
          + WVAEPGIDRKA  +I + H  RV E++RQT++
Sbjct: 61 Y-WVAEPGIDRKASAFIAKFHATRVSESERQTLS 83

[Close]

BLAST of Pay0000975 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-09
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 41 SWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTV 93
          SW+D     K W SD DK + WVAEPGIDRKA  +I + H +RV E++RQT+
Sbjct: 16 SWDDVIYTRKAWASDEDKRY-WVAEPGIDRKASAFIAKFHASRVSESERQTL 66

The following BLAST results are available for this feature:

BLAST of Pay0000975 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0000975 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY99	2.9e-48	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560730 PE=4 SV=1	[more]
A0A0A0K7Y2	6.3e-27	71.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1	[more]
A0A0A0KBW1	1.4e-26	70.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1	[more]
A0A0A0K8W0	1.6e-25	65.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1	[more]
A0A0A0K8V3	8.5e-24	69.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1	[more]

BLAST of Pay0000975 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65989.1	6.0e-48	96.97	hypothetical protein Csa_006868 [Cucumis sativus]	[more]
KAG6588556.1	2.1e-29	73.96	hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN45870.1	1.3e-26	71.13	hypothetical protein Csa_004960 [Cucumis sativus]	[more]
KGN45873.1	3.2e-25	65.63	hypothetical protein Csa_005148 [Cucumis sativus]	[more]
KAG6590516.1	3.2e-25	70.83	hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0000975 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05858.1	2.1e-11	43.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G26620.1	1.5e-09	53.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33511	OS06G0632400 PROTEIN	coord: 1..93
None	No IPR available	PANTHER	PTHR33511:SF17	RIBOSOMAL PROTEIN S12	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0000975.1	Pay0000975.1	mRNA