Pay0000820 (gene) Melon (Payzawat) v1

Overview


Name	Pay0000820
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	cytochrome c oxidase subunit 5b-1, mitochondrial
Location	chr07: 28499010 .. 28501985 (-)
RNA-Seq Expression	Pay0000820
Synteny	Pay0000820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGGAGATTGCTCTCTTTGCACCTCAATGCCCTAAAACGTCTTCCTTCATCATCGACCGCAGCATCTGCTGCTCCATCCGGATCCATTTCCACAGCCTCACGACTTGCTGTTGCTGCTTCATCTCGTGTTTCTCCCTCACCTTGCGTTTCGCTCTTCGCTCGCCATTTCAGCGCTGAGGCTGGTATATCCTATTCTCTTCTCTGGATTTCATATTCATATTTTAGGTTCGGTCACCGAGTGTATGAACATGGATCTATTGTATGATTTGGTCTCGTATGGTTAATATTTTGATTCTTTTTTTCTTGTAAATTAGCTGTTGATGCTGGTCTGCGAAAGAATGTTGAGGATGTAATGCCGATTGCAACCGGTCACGAGCGTGAAGAGCTTGAAGCTACGCTTGAGGTGTTTTTCTTCTGTTCTCGATGCGTGGTTTTGTTTTTCCGATTAGATATTGAAAAATGAAAAAAGAAAAGAAAAAGAAAAGAGCGGTATACAGACTGAAAATAGGTAAAAGATGCTCCCAATCATGCGGAAAATGGACATCAGGTGGATTATTTGTAGTTGTACTACCTAAATTGATTCGTTCATTTTCGTCAGAAGGTCAATATCAAACCTCTACGTACGCCGTTGTATTTGTATTTGTGGACGGTCATTTATCAAACAAATCTTTTTTGCCTTTCCTTGAATTGGTTTTAGAAAAGGTCGACTTTATGTTTGACAAAGAAAATTTTCTGCACGAGGCCCGATGATGTTAGCTTATCCTACTTCAAATATGTTGATAGATTTTGGAGAGGAATAGGTGTAATAATCATCCGATAAAAGAAGCAGCGTATAACTTATGATTTATGAACAGGTGTGCTAAAAGATTTAACATAATGGTTGAGCAAACATTAAAAACAAGCTGAGTCAACAACCTGTTGGGTCTGTTTGGCTAAGGTTCTGGAATGATAGGTGCCATACGATATGACCCAAAACGTTCCAATTGGCATGTTGTATTTCGTGGGATTCTTGAATTTTCTGAGGCAATCCTCATTCCTCATGTTGTACTGATATTGAGTCTGGTTTATGTAAATATTTCAATTGATTGGGATCTGAAGTATAATTCATTATCAAAATGAAGTCTCATTCCAATGGGGTTTATGTTTGCAGGGAAGAGACATCCTTGATTATAAACAGACCATGTAGGTCTTTACTTTTGGAATAAGGTTGGTTTTTTTTACATGTTTTTTATTTTTTTATTTTGGGTCGTGTCCGAGGAAACCCTTTTCCTCCCTTTCTTCGTACTCCATATTGATGTCTTATTTGTGATGAACTTATAAATAAAGGAACATGCAATGTTGAATTATACTTTACTGTGTTGTGACTTGTGAGCCCGTGTGTGTGTTTTCCGATAATTTACATGCCAAATTACTATGGTAGTCTGATGGCTTTTGGGTACACAAAAGGGTATTGCATGCTATCTTTAGTTCAAGAAGACTTGTTCAGCAGGTTCTTCACTCTTTTTATATAAAGTAGGCGCTTTAGGCAAAATATAGGGGAGAGAGTTCTTGAGCCATACCATTTGTGTGATCCTTTGAGGAAAAATTGACCGAGGGTACACCTTCCATTTTTAGGCAGCTTGCTGAATGAAATATTTTGAATAAATCCAGGAAAATAGAAAACCCAAAGTATGATTTAGGATGATCACTGAATAAGCACTAGAAGAAACTTTCGATTTTCATAATCTTCTATTTTCAGTGTCATATAGTACTTATATGTAGTGGTTATTAATTTTGTGATTAGTTGCCTTTTTATATATGAGTACACTTTGCTTCGAGTTCAATGAGCCGGTAACTTGTTTTGCTCTTGATGCACATCAAAATACCGTGTGAGGATGTGCCTGAAAGAATAAGTTTGGTTGCACGAACTATTTCCTTATATGAAATCTAAACACTTTCTTGTGCCTTTAGGAAGCTCCTGCTGTTATAAAGTCATATTACGATGAAAGAATAGTTGGGTGCCCTGGAGGTGAAGGCGGTAAGCACTTGCAATTTCTCTTTTAAGTTTTATCCATTCCTTTTCATCAATTTTGTGCAAGCCTGACAAAATTTTACGTATGTAAATTTTGCTTTCTTCCCTACACACGAGATTTTCCAACTTATTGTTGTCGCATGTTTTTGATTATTGTAGAGGATGAGCATGATGTTATCTGGTTTCGGCTGAGGAAAGGCGAGCCACTTGAATGCCCTGTGTGCACGCAGTATTTCGCGGTGAGGACTTATTGTAAATAATTACGTTATGTTGCCAAAATATGGAATGCTAGAAATGGTATTGAAAAATATAAGAACGCTATAACTTCATTGATAGAGTAAAATATCATTCTTGGGGGTGGGAAGTACAACCCCAAAAAACTAACCATGGATTACAATCTATTCTAATTTTAATTAATTTTTATGTATAGCTAATCTGAACCTAGCTTAACTATTTAAGACATTACAACTTCAACCTAAAGGTTAAGGATTCAAATCACCCATCCTCACCTCGTGTTGAAGTAAAAAAAAAAAGGTCTTCGTGCATGATAAGTTGTGAATTGTGATTATACACACACATAGGAATTACTTATGTTTCCTCTTTTGTTCATGGTGGGTTAATTGCATTCTTCACGTTATTATTATTATTTTGATTTCAACAAGTAGAGAGGTTGAGGATTCAAACCTATGACCCATTGGTGGAGAGCAAATCCTTTGCCAATTGAGTTATATGCTATATTTGGTTCTTCTAATTATGATTAGAACAAAGTATGTATGTTAGTTCTCTCTCCAATAGTCTCACTTCTTGAATTTAAATACGGATAAAGACATTCAAGTCTTGATCAGAAATTAACTAGGAATGCCAAAATTTTCTAATTTGAAATTGTGTTCGCAGCTGGAAGTAGTTGGACCTGGAGGATCGCCAGATGGTTATGGAGATGACGACGATCACCATCGCTGA

mRNA sequence

ATGTGGAGGAGATTGCTCTCTTTGCACCTCAATGCCCTAAAACGTCTTCCTTCATCATCGACCGCAGCATCTGCTGCTCCATCCGGATCCATTTCCACAGCCTCACGACTTGCTGTTGCTGCTTCATCTCGTGTTTCTCCCTCACCTTGCGTTTCGCTCTTCGCTCGCCATTTCAGCGCTGAGGCTGCTGTTGATGCTGGTCTGCGAAAGAATGTTGAGGATGTAATGCCGATTGCAACCGGTCACGAGCGTGAAGAGCTTGAAGCTACGCTTGAGGAAGCTCCTGCTGTTATAAAGTCATATTACGATGAAAGAATAGTTGGGTGCCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTATCTGGTTTCGGCTGAGGAAAGGCGAGCCACTTGAATGCCCTGTGTGCACGCAGTATTTCGCGCTGGAAGTAGTTGGACCTGGAGGATCGCCAGATGGTTATGGAGATGACGACGATCACCATCGCTGA

Coding sequence (CDS)

ATGTGGAGGAGATTGCTCTCTTTGCACCTCAATGCCCTAAAACGTCTTCCTTCATCATCGACCGCAGCATCTGCTGCTCCATCCGGATCCATTTCCACAGCCTCACGACTTGCTGTTGCTGCTTCATCTCGTGTTTCTCCCTCACCTTGCGTTTCGCTCTTCGCTCGCCATTTCAGCGCTGAGGCTGCTGTTGATGCTGGTCTGCGAAAGAATGTTGAGGATGTAATGCCGATTGCAACCGGTCACGAGCGTGAAGAGCTTGAAGCTACGCTTGAGGAAGCTCCTGCTGTTATAAAGTCATATTACGATGAAAGAATAGTTGGGTGCCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTATCTGGTTTCGGCTGAGGAAAGGCGAGCCACTTGAATGCCCTGTGTGCACGCAGTATTTCGCGCTGGAAGTAGTTGGACCTGGAGGATCGCCAGATGGTTATGGAGATGACGACGATCACCATCGCTGA

Protein sequence

MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSAEAAVDAGLRKNVEDVMPIATGHEREELEATLEEAPAVIKSYYDERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHHR

Homology

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BLAST of Pay0000820 vs. ExPASy Swiss-Prot
Match: Q9LW15 (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-43
Identity = 100/183 (54.64%), Postives = 118/183 (64.48%), Query Frame = 0


Query: 1   MWRRLLSLHLNAL-----KRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFA 60
           MWRR++S  L  L        P  S AA+  P G    A+R A++ASS V P        
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIP-------- 60

Query: 61  RHFSAEAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVI 120
           R FS++ +V+    K VEDVMPIATGHE+EELEA LE                 EAPA++
Sbjct: 61  RRFSSD-SVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIV 120

Query: 121 KSYYDERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDD 162
           KSYYD+RIVGCPGGEGEDEHDV+WF L KG+  ECPVCTQYF LEVVGPGG PDG+GD+D
Sbjct: 121 KSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDED 174

[Close]

BLAST of Pay0000820 vs. ExPASy Swiss-Prot
Match: Q9SSB8 (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.6e-43
Identity = 95/178 (53.37%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRR++S HL ++     S+  + AAPS   +      ++ S+R S  P  S        
Sbjct: 1   MWRRIVSSHLKSI-----SAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYSSIFSRLIG 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
            AA D  ++K VEDVMPIATGHE+EEL+A LE                 EAPAV+KSYYD
Sbjct: 61  SAAADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
            RIVGCPGGEGEDEHDV+WF L KG+  ECPVCTQYF LEVVGPGG PDG+G  DDHH
Sbjct: 121 MRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHG--DDHH 171

[Close]

BLAST of Pay0000820 vs. ExPASy Swiss-Prot
Match: Q9SSS5 (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN=At1g52710 PE=3 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 4.0e-20
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 92  EEAPAVIKSYYDERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSP 151
           +E+PAV++SY+D+R +GC GGEGED HDV+WF L KG+  ECPVC+QYF        G P
Sbjct: 26  KESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGKSFECPVCSQYF------EHGPP 85

Query: 152 DGYGDDDDHH 162
           DG+GDD+DHH
Sbjct: 86  DGHGDDEDHH 89

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BLAST of Pay0000820 vs. ExPASy Swiss-Prot
Match: P29505 (Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1 SV=3)

HSP 1 Score: 49.3 bits (116), Expect = 4.8e-05
Identity = 20/57 (35.09%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 93  EAPAVIKSYYDERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGG 150
           ++P +++S +  RIV C GG+GE EHD+++  + + +P  C  C Q F L+ +   G
Sbjct: 60  KSPVIVESIFHSRIVACEGGDGE-EHDILFHTVAEKKPTICLDCGQVFKLKHISSEG 115

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BLAST of Pay0000820 vs. ExPASy TrEMBL
Match: A0A5A7TM92 (Cytochrome c oxidase subunit 5b-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001540 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.3e-81
Identity = 161/178 (90.45%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAAVDAGLRKNVEDVMPIATGHEREELEATLE                 EAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 178

[Close]

BLAST of Pay0000820 vs. ExPASy TrEMBL
Match: A0A1S3BYC3 (cytochrome c oxidase subunit 5b-1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494723 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.3e-81
Identity = 161/178 (90.45%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAAVDAGLRKNVEDVMPIATGHEREELEATLE                 EAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 178

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BLAST of Pay0000820 vs. ExPASy TrEMBL
Match: A0A0A0KYD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004280 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 150/178 (84.27%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRRLLSL L+ALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSP VSLFARHFSA
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAAVDAGL+KNVEDVMPIATGHEREELEA LE                 EAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ERIVGCPGGEG+DEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG+DDDHH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHH 178

[Close]

BLAST of Pay0000820 vs. ExPASy TrEMBL
Match: A0A6J1KD83 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492803 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 128/178 (71.91%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWR+LL   L ALK  PS+S AAS AP G IS ASRL VAASS V PSP VS +ARH+  
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAAS-APLGFISRASRLTVAASSHVFPSPHVSFYARHYGV 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAA DAGL+K VEDVMPIATGHEREELEA LE                 E PAVIKSYYD
Sbjct: 61  EAA-DAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ER+VGCPGGEGEDEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG+DDDHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGNDDDHH 176

[Close]

BLAST of Pay0000820 vs. ExPASy TrEMBL
Match: A0A6J1GC67 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452829 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 126/178 (70.79%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWR+ L   L ALK  PS+S AAS AP G IS ASRL VAASS V PSP VS +ARH+ A
Sbjct: 1   MWRKFLFSQLRALKSFPSTSAAAS-APLGFISRASRLTVAASSHVFPSPHVSFYARHYGA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           E AVDAGL+K VEDVMPIATGHEREELEA LE                 E PAVIKSYYD
Sbjct: 61  E-AVDAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ER+VGCPGGEGEDEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDG+G++DDHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGFGNEDDHH 176

[Close]

BLAST of Pay0000820 vs. NCBI nr
Match: XP_008454275.1 (PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis melo] >KAA0044422.1 cytochrome c oxidase subunit 5b-1 [Cucumis melo var. makuwa] >TYK29549.1 cytochrome c oxidase subunit 5b-1 [Cucumis melo var. makuwa])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 161/178 (90.45%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAAVDAGLRKNVEDVMPIATGHEREELEATLE                 EAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 178

[Close]

BLAST of Pay0000820 vs. NCBI nr
Match: XP_004152218.1 (cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus] >KGN52866.1 hypothetical protein Csa_014612 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 150/178 (84.27%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRRLLSL L+ALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSP VSLFARHFSA
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAAVDAGL+KNVEDVMPIATGHEREELEA LE                 EAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ERIVGCPGGEG+DEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG+DDDHH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHH 178

[Close]

BLAST of Pay0000820 vs. NCBI nr
Match: XP_038878141.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 1.6e-69
Identity = 144/178 (80.90%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRRLLSL LNALKRLPSSST    APS SISTASRLAVAASS VSPSP +SLFARHFSA
Sbjct: 1   MWRRLLSLQLNALKRLPSSST----APSVSISTASRLAVAASSYVSPSPYISLFARHFSA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAAVDAGL+KNVEDVMPIATGHEREELEA LE                 EAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ER+VGCPGGEGEDEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYGDDD HH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]

BLAST of Pay0000820 vs. NCBI nr
Match: XP_022998034.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-59
Identity = 128/178 (71.91%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWR+LL   L ALK  PS+S AAS AP G IS ASRL VAASS V PSP VS +ARH+  
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAAS-APLGFISRASRLTVAASSHVFPSPHVSFYARHYGV 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAA DAGL+K VEDVMPIATGHEREELEA LE                 E PAVIKSYYD
Sbjct: 61  EAA-DAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ER+VGCPGGEGEDEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG+DDDHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGNDDDHH 176

[Close]

BLAST of Pay0000820 vs. NCBI nr
Match: XP_023523888.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023523889.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-59
Identity = 128/178 (71.91%), Postives = 138/178 (77.53%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWR+LL   L ALK  PS+S AAS AP G IS ASRL VAASS V PSP VS +ARH+ A
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAAS-APLGFISRASRLTVAASSHVFPSPHVSFYARHYGA 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
           EAA DAGL+K VEDVMPIATGHEREELEA LE                 E PAVIKSYYD
Sbjct: 61  EAA-DAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
           ER+VGCPGGEGEDEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG++DDHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGNEDDHH 176

[Close]

BLAST of Pay0000820 vs. TAIR 10
Match: AT3G15640.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 8.3e-45
Identity = 100/183 (54.64%), Postives = 118/183 (64.48%), Query Frame = 0


Query: 1   MWRRLLSLHLNAL-----KRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFA 60
           MWRR++S  L  L        P  S AA+  P G    A+R A++ASS V P        
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIP-------- 60

Query: 61  RHFSAEAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVI 120
           R FS++ +V+    K VEDVMPIATGHE+EELEA LE                 EAPA++
Sbjct: 61  RRFSSD-SVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIV 120

Query: 121 KSYYDERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDD 162
           KSYYD+RIVGCPGGEGEDEHDV+WF L KG+  ECPVCTQYF LEVVGPGG PDG+GD+D
Sbjct: 121 KSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDED 174

[Close]

BLAST of Pay0000820 vs. TAIR 10
Match: AT3G15640.2 (Rubredoxin-like superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.8e-44
Identity = 100/183 (54.64%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 1   MWRRLLSLHLNAL-----KRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFA 60
           MWRR++S  L  L        P  S AA+  P G    A+R A++ASS V P        
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIP-------- 60

Query: 61  RHFSAEAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVI 120
           R FS+++   A   K VEDVMPIATGHE+EELEA LE                 EAPA++
Sbjct: 61  RRFSSDSETPA--TKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIV 120

Query: 121 KSYYDERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDD 162
           KSYYD+RIVGCPGGEGEDEHDV+WF L KG+  ECPVCTQYF LEVVGPGG PDG+GD+D
Sbjct: 121 KSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDED 173

[Close]

BLAST of Pay0000820 vs. TAIR 10
Match: AT1G80230.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 174.9 bits (442), Expect = 5.4e-44
Identity = 95/178 (53.37%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60
           MWRR++S HL ++     S+  + AAPS   +      ++ S+R S  P  S        
Sbjct: 1   MWRRIVSSHLKSI-----SAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYSSIFSRLIG 60

Query: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLE-----------------EAPAVIKSYYD 120
            AA D  ++K VEDVMPIATGHE+EEL+A LE                 EAPAV+KSYYD
Sbjct: 61  SAAADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYD 120

Query: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 162
            RIVGCPGGEGEDEHDV+WF L KG+  ECPVCTQYF LEVVGPGG PDG+G  DDHH
Sbjct: 121 MRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHG--DDHH 171

[Close]

BLAST of Pay0000820 vs. TAIR 10
Match: AT1G52710.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-21
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 92  EEAPAVIKSYYDERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSP 151
           +E+PAV++SY+D+R +GC GGEGED HDV+WF L KG+  ECPVC+QYF        G P
Sbjct: 26  KESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGKSFECPVCSQYF------EHGPP 85

Query: 152 DGYGDDDDHH 162
           DG+GDD+DHH
Sbjct: 86  DGHGDDEDHH 89

The following BLAST results are available for this feature:

BLAST of Pay0000820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW15	1.2e-43	54.64	Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9SSB8	7.6e-43	53.37	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9SSS5	4.0e-20	60.00	Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN...	[more]
P29505	4.8e-05	35.09	Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1...	[more]

BLAST of Pay0000820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TM92	7.3e-81	90.45	Cytochrome c oxidase subunit 5b-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BYC3	7.3e-81	90.45	cytochrome c oxidase subunit 5b-1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0KYD4	1.7e-74	84.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004280 PE=4 SV=1	[more]
A0A6J1KD83	1.2e-59	71.91	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GC67	1.0e-58	70.79	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]

BLAST of Pay0000820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454275.1	1.5e-80	90.45	PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis melo] >KAA0...	[more]
XP_004152218.1	3.6e-74	84.27	cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus] >KGN52866.1 h...	[more]
XP_038878141.1	1.6e-69	80.90	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Benincasa hispida]	[more]
XP_022998034.1	2.5e-59	71.91	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima]	[more]
XP_023523888.1	2.5e-59	71.91	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pep...	[more]

BLAST of Pay0000820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15640.1	8.3e-45	54.64	Rubredoxin-like superfamily protein	[more]
AT3G15640.2	1.8e-44	54.64	Rubredoxin-like superfamily protein	[more]
AT1G80230.1	5.4e-44	53.37	Rubredoxin-like superfamily protein	[more]
AT1G52710.1	2.9e-21	60.00	Rubredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002124	Cytochrome c oxidase, subunit Vb	PFAM	PF01215	COX5B	coord: 93..148 e-value: 3.4E-10 score: 39.7
IPR002124	Cytochrome c oxidase, subunit Vb	PANTHER	PTHR10122	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	coord: 45..161
IPR002124	Cytochrome c oxidase, subunit Vb	PROSITE	PS51359	COX5B_2	coord: 40..149 score: 16.510317
None	No IPR available	GENE3D	2.60.260.40	q5lls5 like domains	coord: 93..161 e-value: 8.1E-21 score: 75.5
None	No IPR available	PANTHER	PTHR10122:SF18	BNAC01G35940D PROTEIN	coord: 45..161
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 70..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0000820.1	Pay0000820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005740	mitochondrial envelope