Pay0000690 (gene) Melon (Payzawat) v1

Overview


Name	Pay0000690
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	Contig00288_ERROPOS136135: 126798 .. 127869 (+)
RNA-Seq Expression	Pay0000690
Synteny	Pay0000690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGTGGAACGCATTAGCTGTCCGCTCTCCGGTTGGGCAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTAGTTAGAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGCAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG

mRNA sequence

ATGGGCTGTCAAGAACGTAGAGGAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACATTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGCAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG

Coding sequence (CDS)

ATGGGCTGTCAAGAACGTAGAGGAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACATTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGCAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG

Protein sequence

MGCQERRGVRVGEGQSLILKTSILKTKEAGGKGGKALRSWFSLPFEILRRVALWRAHSIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

Homology

[Close]

BLAST of Pay0000690 vs. ExPASy TrEMBL
Match: A0A072TVZ8 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0002s0250 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.3e-57
Identity = 134/203 (66.01%), Postives = 141/203 (69.46%), Query Frame = 0


Query: 1   MGCQERRGVRVGEGQSLILKTSIL--KTKEAGGKGG----------------KALRSWFS 60
           MGCQ+RRGVRVGEGQSL+LKTSIL  K KE+GGK G                + LR  F 
Sbjct: 11  MGCQKRRGVRVGEGQSLVLKTSILKFKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQ 70

Query: 61  LP---FEILRRVALWRAH--------------------SIYDFSFMDVDKILPFSSTLGW 120
           L    FEILRRVALWRA                       Y  SFMDVDKILP SSTLGW
Sbjct: 71  LSTFCFEILRRVALWRAQYDESCKLCSGGSYCLSLASMLWYALSFMDVDKILPSSSTLGW 130

Query: 121 HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGDSRIGQPFKLLLNPWA 163
             L+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRGV NK RS DSRIGQPF+LLLN  A
Sbjct: 131 PRLQVKGEVQTRKGLWWIPRHPETRKGVVSDEMLRGVENKHRSEDSRIGQPFELLLNSRA 190

[Close]

BLAST of Pay0000690 vs. ExPASy TrEMBL
Match: A0A452YTU0 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.4e-53
Identity = 112/152 (73.68%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 1   MGCQERRGVRVGEGQSLILKTSILKTKEAGGKGG----------------KALRSWFSLP 60
           MGCQ+ RGVRVGEGQSL+LKTSILK KE+GGK G                + LR  F L 
Sbjct: 1   MGCQKGRGVRVGEGQSLVLKTSILKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLS 60

Query: 61  ---FEILRRVALWRAHSIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHP 120
              FEILRRVALWRAHSIYDF+FMDVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHP
Sbjct: 61  TFCFEILRRVALWRAHSIYDFTFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRHP 120

Query: 121 ETRKGVVSDEMLRGVANKRRSGDSRIGQPFKL 134
           ETRKGV SDEMLRGV NK RSGDS+IGQPFKL
Sbjct: 121 ETRKGVASDEMLRGVENKHRSGDSQIGQPFKL 152

[Close]

BLAST of Pay0000690 vs. ExPASy TrEMBL
Match: A0A2N9HUL9 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43295 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.0e-51
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 58  SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 117
           SIYD SFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV 
Sbjct: 48  SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVE 107

Query: 118 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
           NKRRSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Sbjct: 108 NKRRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP 152

[Close]

BLAST of Pay0000690 vs. ExPASy TrEMBL
Match: A0A2P2JY74 (Uncharacterized protein ycf68 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.5e-49
Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 58  SIYDFSFMDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG 117
           SIYD SFMDVDKILPFSSTLGWHS  LKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRG
Sbjct: 48  SIYDLSFMDVDKILPFSSTLGWHSLNLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRG 107

Query: 118 VANKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
           V NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS+QRKRKQKRFP
Sbjct: 108 VENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSNQRKRKQKRFP 154

[Close]

BLAST of Pay0000690 vs. ExPASy TrEMBL
Match: A0A453GAR8 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 7.3e-49
Identity = 106/144 (73.61%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 9   VRVGEGQSLILKTSILKTKEAGGKGG----------------KALRSWFSLP---FEILR 68
           VRVGEGQSL+LKTSILK KE+GGK G                + LR  F L    FEILR
Sbjct: 9   VRVGEGQSLVLKTSILKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLSTFCFEILR 68

Query: 69  RVALWRAHSIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVS 128
           RVALWRAHSIYDF+FMDVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHPETRKGV S
Sbjct: 69  RVALWRAHSIYDFTFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRHPETRKGVAS 128

Query: 129 DEMLRGVANKRRSGDSRIGQPFKL 134
           DEMLRGV NK RSGDS+IGQPFKL
Sbjct: 129 DEMLRGVENKHRSGDSQIGQPFKL 152

[Close]

BLAST of Pay0000690 vs. NCBI nr
Match: KEH17695.1 (hypothetical protein MTR_0002s0250 [Medicago truncatula])

HSP 1 Score: 230.7 bits (587), Expect = 8.9e-57
Identity = 134/203 (66.01%), Postives = 141/203 (69.46%), Query Frame = 0


Query: 1   MGCQERRGVRVGEGQSLILKTSIL--KTKEAGGKGG----------------KALRSWFS 60
           MGCQ+RRGVRVGEGQSL+LKTSIL  K KE+GGK G                + LR  F 
Sbjct: 11  MGCQKRRGVRVGEGQSLVLKTSILKFKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQ 70

Query: 61  LP---FEILRRVALWRAH--------------------SIYDFSFMDVDKILPFSSTLGW 120
           L    FEILRRVALWRA                       Y  SFMDVDKILP SSTLGW
Sbjct: 71  LSTFCFEILRRVALWRAQYDESCKLCSGGSYCLSLASMLWYALSFMDVDKILPSSSTLGW 130

Query: 121 HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGDSRIGQPFKLLLNPWA 163
             L+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRGV NK RS DSRIGQPF+LLLN  A
Sbjct: 131 PRLQVKGEVQTRKGLWWIPRHPETRKGVVSDEMLRGVENKHRSEDSRIGQPFELLLNSRA 190

[Close]

BLAST of Pay0000690 vs. NCBI nr
Match: KAG5222336.1 (Vacuolar protein sorting-associated protein [Salix suchowensis])

HSP 1 Score: 208.0 bits (528), Expect = 6.1e-50
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 58  SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 117
           SIYD SFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV 
Sbjct: 132 SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVE 191

Query: 118 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
           NKRRSGDSRIGQPFKLL NPWAGKRQPGELKHLS+QRKRKQKRFP
Sbjct: 192 NKRRSGDSRIGQPFKLLPNPWAGKRQPGELKHLSNQRKRKQKRFP 236

[Close]

BLAST of Pay0000690 vs. NCBI nr
Match: KAF7117209.1 (hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii])

HSP 1 Score: 205.7 bits (522), Expect = 3.1e-49
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 58  SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 117
           SIYD SFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV 
Sbjct: 77  SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVE 136

Query: 118 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
           NK RSGDSRIGQPF+LLLNPWA KRQPGELKHLSSQRKRKQKRFP
Sbjct: 137 NKHRSGDSRIGQPFELLLNPWADKRQPGELKHLSSQRKRKQKRFP 181

[Close]

BLAST of Pay0000690 vs. NCBI nr
Match: VVW91297.1 (unnamed protein product, partial [Nymphaea colorata])

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 58  SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 117
           SIYD SFMDVDKILPFSSTLGWHSL V GEVQT+KGLRWIPRHPETRKGV SDEMLRGV 
Sbjct: 1   SIYDLSFMDVDKILPFSSTLGWHSLNVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVE 60

Query: 118 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
           NK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Sbjct: 61  NKHRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP 105

[Close]

BLAST of Pay0000690 vs. NCBI nr
Match: KAB8477469.1 (hypothetical protein FH972_025335 [Carpinus fangiana])

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-47
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 65  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGD 124
           MDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV NKRRSGD
Sbjct: 1   MDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGD 60

Query: 125 SRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
           SRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Sbjct: 61  SRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 98

The following BLAST results are available for this feature:

BLAST of Pay0000690 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0000690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A072TVZ8	4.3e-57	66.01	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0002s0250 PE=4 SV=...	[more]
A0A452YTU0	6.4e-53	73.68	Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S...	[more]
A0A2N9HUL9	6.0e-51	96.19	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43295 PE=3...	[more]
A0A2P2JY74	1.5e-49	94.39	Uncharacterized protein ycf68 OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]
A0A453GAR8	7.3e-49	73.61	Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S...	[more]

BLAST of Pay0000690 vs. NCBI nr


Match Name	E-value	Identity	Description
KEH17695.1	8.9e-57	66.01	hypothetical protein MTR_0002s0250 [Medicago truncatula]	[more]
KAG5222336.1	6.1e-50	95.24	Vacuolar protein sorting-associated protein [Salix suchowensis]	[more]
KAF7117209.1	3.1e-49	94.29	hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii]	[more]
VVW91297.1	2.0e-48	92.38	unnamed protein product, partial [Nymphaea colorata]	[more]
KAB8477469.1	1.3e-47	97.96	hypothetical protein FH972_025335 [Carpinus fangiana]	[more]

BLAST of Pay0000690 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0000690.1	Pay0000690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane