Pay0000585 (gene) Melon (Payzawat) v1

Overview


Name	Pay0000585
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	negative regulator of systemic acquired resistance SNI1
Location	chr05: 10653819 .. 10654171 (+)
RNA-Seq Expression	Pay0000585
Synteny	Pay0000585

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTACAAAGGATTAATGAAGGATTGTGTGACTACCCTGTGTGGATTGGGTCAATTTCTTGCTGAATATGACAATGTTGTCCAATCTTCTGAGACTTCTATGGCAAAACAACCTGAAGCTATTCATACTGCTTTGGCCACTGCGTTCCTTCATTTCGGAAGGATAACATATGCTGCCGTGCTGAAACTTATGGGAATCGTAGGTATTTTGGCATTCTAGTCATCCAAGTACTATTTTTCTTTATTATTGATCTTAATGGAGAACTGCCGTAGGTAATGGAGCTTGATTCATCAGAAAAGAATGCGGATATGCAAGGTCACACTACAAGGGCTGATGGTGTGAGGTACTAG

mRNA sequence

ATGAACTACAAAGGATTAATGAAGGATTGTGTGACTACCCTGTGTGGATTGGGTCAATTTCTTGCTGAATATGACAATGTTGTCCAATCTTCTGAGACTTCTATGGCAAAACAACCTGAAGCTATTCATACTGCTTTGGCCACTGCGTTCCTTCATTTCGGAAGGATAACATATGCTGCCGTGCTGAAACTTATGGGAATCGTAATGGAGCTTGATTCATCAGAAAAGAATGCGGATATGCAAGGTCACACTACAAGGGCTGATGGTGTGAGGTACTAG

Coding sequence (CDS)

ATGAACTACAAAGGATTAATGAAGGATTGTGTGACTACCCTGTGTGGATTGGGTCAATTTCTTGCTGAATATGACAATGTTGTCCAATCTTCTGAGACTTCTATGGCAAAACAACCTGAAGCTATTCATACTGCTTTGGCCACTGCGTTCCTTCATTTCGGAAGGATAACATATGCTGCCGTGCTGAAACTTATGGGAATCGTAATGGAGCTTGATTCATCAGAAAAGAATGCGGATATGCAAGGTCACACTACAAGGGCTGATGGTGTGAGGTACTAG

Protein sequence

MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAAVLKLMGIVMELDSSEKNADMQGHTTRADGVRY

Homology

[Close]

BLAST of Pay0000585 vs. ExPASy Swiss-Prot
Match: Q9SWA6 (Negative regulator of systemic acquired resistance SNI1 OS=Arabidopsis thaliana OX=3702 GN=SNI1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 3.9e-04
Identity = 29/91 (31.87%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           +N+K LMKD ++T+C                        +A   +++   LH   +T  A
Sbjct: 211 VNFKLLMKDYLSTMCA---------------------SIDADEKSISLVELHKDMLT--A 270

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           + +L+ ++MELD+S+K AD++G T+R DGVR
Sbjct: 271 MKELLVMIMELDTSKKKADLEGITSRGDGVR 278

[Close]

BLAST of Pay0000585 vs. ExPASy TrEMBL
Match: A0A5D3CYE6 (Negative regulator of systemic acquired resistance, putative isoform 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00890 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.0e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
          MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA
Sbjct: 1  MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60

Query: 61 VLKLMGIVMELDSSEKNADMQGHTTRADGVRY 93
          VLKLMGIVMELDSSEKNADMQGHTTRADGVRY
Sbjct: 61 VLKLMGIVMELDSSEKNADMQGHTTRADGVRY 92

[Close]

BLAST of Pay0000585 vs. ExPASy TrEMBL
Match: A0A0A0LUN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G076610 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37
Identity = 82/91 (90.11%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCGLGQFLAEYDN VQSSETS+AKQPEAI TALATAFLHFGRIT AA
Sbjct: 216 MNYKGLMKDCVTTLCGLGQFLAEYDNAVQSSETSVAKQPEAIDTALATAFLHFGRITCAA 275

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +VMELDSS+KNADMQGHTTR+DGVR
Sbjct: 276 MLKLMIMVMELDSSKKNADMQGHTTRSDGVR 306

[Close]

BLAST of Pay0000585 vs. ExPASy TrEMBL
Match: A0A5A7UPI7 (Negative regulator of systemic acquired resistance, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002040 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-35
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCG GQFLAEYDN VQSSETSMAKQP+AI TALATAFLHFGR+T AA
Sbjct: 157 MNYKGLMKDCVTTLCGFGQFLAEYDNAVQSSETSMAKQPKAIDTALATAFLHFGRLTCAA 216

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +V+E+D S+KNADMQGH TRADGVR
Sbjct: 217 MLKLMVMVLEVDLSKKNADMQGHITRADGVR 247

[Close]

BLAST of Pay0000585 vs. ExPASy TrEMBL
Match: A0A1S3B7L2 (uncharacterized protein LOC103486681 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486681 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-35
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCG GQFLAEYDN VQSSETSMAKQP+AI TALATAFLHFGR+T AA
Sbjct: 216 MNYKGLMKDCVTTLCGFGQFLAEYDNAVQSSETSMAKQPKAIDTALATAFLHFGRLTCAA 275

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +V+E+D S+KNADMQGH TRADGVR
Sbjct: 276 MLKLMVMVLEVDLSKKNADMQGHITRADGVR 306

[Close]

BLAST of Pay0000585 vs. ExPASy TrEMBL
Match: A0A1S3B6E1 (uncharacterized protein LOC103486681 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486681 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-35
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCG GQFLAEYDN VQSSETSMAKQP+AI TALATAFLHFGR+T AA
Sbjct: 216 MNYKGLMKDCVTTLCGFGQFLAEYDNAVQSSETSMAKQPKAIDTALATAFLHFGRLTCAA 275

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +V+E+D S+KNADMQGH TRADGVR
Sbjct: 276 MLKLMVMVLEVDLSKKNADMQGHITRADGVR 306

[Close]

BLAST of Pay0000585 vs. NCBI nr
Match: KAA0031997.1 (Negative regulator of systemic acquired resistance, putative isoform 3 [Cucumis melo var. makuwa] >TYK16817.1 Negative regulator of systemic acquired resistance, putative isoform 3 [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 8.3e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
          MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA
Sbjct: 1  MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60

Query: 61 VLKLMGIVMELDSSEKNADMQGHTTRADGVRY 93
          VLKLMGIVMELDSSEKNADMQGHTTRADGVRY
Sbjct: 61 VLKLMGIVMELDSSEKNADMQGHTTRADGVRY 92

[Close]

BLAST of Pay0000585 vs. NCBI nr
Match: XP_011653380.1 (negative regulator of systemic acquired resistance SNI1 isoform X2 [Cucumis sativus] >KAE8652727.1 hypothetical protein Csa_013169 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37
Identity = 82/91 (90.11%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCGLGQFLAEYDN VQSSETS+AKQPEAI TALATAFLHFGRIT AA
Sbjct: 216 MNYKGLMKDCVTTLCGLGQFLAEYDNAVQSSETSVAKQPEAIDTALATAFLHFGRITCAA 275

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +VMELDSS+KNADMQGHTTR+DGVR
Sbjct: 276 MLKLMIMVMELDSSKKNADMQGHTTRSDGVR 306

[Close]

BLAST of Pay0000585 vs. NCBI nr
Match: XP_004148782.1 (negative regulator of systemic acquired resistance SNI1 isoform X1 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37
Identity = 82/91 (90.11%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCGLGQFLAEYDN VQSSETS+AKQPEAI TALATAFLHFGRIT AA
Sbjct: 216 MNYKGLMKDCVTTLCGLGQFLAEYDNAVQSSETSVAKQPEAIDTALATAFLHFGRITCAA 275

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +VMELDSS+KNADMQGHTTR+DGVR
Sbjct: 276 MLKLMIMVMELDSSKKNADMQGHTTRSDGVR 306

[Close]

BLAST of Pay0000585 vs. NCBI nr
Match: XP_008442923.1 (PREDICTED: uncharacterized protein LOC103486681 isoform X1 [Cucumis melo])

HSP 1 Score: 157.1 bits (396), Expect = 7.1e-35
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCG GQFLAEYDN VQSSETSMAKQP+AI TALATAFLHFGR+T AA
Sbjct: 216 MNYKGLMKDCVTTLCGFGQFLAEYDNAVQSSETSMAKQPKAIDTALATAFLHFGRLTCAA 275

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +V+E+D S+KNADMQGH TRADGVR
Sbjct: 276 MLKLMVMVLEVDLSKKNADMQGHITRADGVR 306

[Close]

BLAST of Pay0000585 vs. NCBI nr
Match: KAA0057020.1 (Negative regulator of systemic acquired resistance, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 7.1e-35
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           MNYKGLMKDCVTTLCG GQFLAEYDN VQSSETSMAKQP+AI TALATAFLHFGR+T AA
Sbjct: 157 MNYKGLMKDCVTTLCGFGQFLAEYDNAVQSSETSMAKQPKAIDTALATAFLHFGRLTCAA 216

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           +LKLM +V+E+D S+KNADMQGH TRADGVR
Sbjct: 217 MLKLMVMVLEVDLSKKNADMQGHITRADGVR 247

[Close]

BLAST of Pay0000585 vs. TAIR 10
Match: AT4G18470.1 (negative regulator of systemic acquired resistance (SNI1) )

HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05
Identity = 29/91 (31.87%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 1   MNYKGLMKDCVTTLCGLGQFLAEYDNVVQSSETSMAKQPEAIHTALATAFLHFGRITYAA 60
           +N+K LMKD ++T+C                        +A   +++   LH   +T  A
Sbjct: 211 VNFKLLMKDYLSTMCA---------------------SIDADEKSISLVELHKDMLT--A 270

Query: 61  VLKLMGIVMELDSSEKNADMQGHTTRADGVR 92
           + +L+ ++MELD+S+K AD++G T+R DGVR
Sbjct: 271 MKELLVMIMELDTSKKKADLEGITSRGDGVR 278

The following BLAST results are available for this feature:

BLAST of Pay0000585 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SWA6	3.9e-04	31.87	Negative regulator of systemic acquired resistance SNI1 OS=Arabidopsis thaliana ...	[more]

BLAST of Pay0000585 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYE6	4.0e-44	100.00	Negative regulator of systemic acquired resistance, putative isoform 3 OS=Cucumi...	[more]
A0A0A0LUN6	1.6e-37	90.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G076610 PE=4 SV=1	[more]
A0A5A7UPI7	3.4e-35	84.62	Negative regulator of systemic acquired resistance, putative isoform 1 OS=Cucumi...	[more]
A0A1S3B7L2	3.4e-35	84.62	uncharacterized protein LOC103486681 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B6E1	3.4e-35	84.62	uncharacterized protein LOC103486681 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Pay0000585 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031997.1	8.3e-44	100.00	Negative regulator of systemic acquired resistance, putative isoform 3 [Cucumis ...	[more]
XP_011653380.1	3.4e-37	90.11	negative regulator of systemic acquired resistance SNI1 isoform X2 [Cucumis sati...	[more]
XP_004148782.1	3.4e-37	90.11	negative regulator of systemic acquired resistance SNI1 isoform X1 [Cucumis sati...	[more]
XP_008442923.1	7.1e-35	84.62	PREDICTED: uncharacterized protein LOC103486681 isoform X1 [Cucumis melo]	[more]
KAA0057020.1	7.1e-35	84.62	Negative regulator of systemic acquired resistance, putative isoform 1 [Cucumis ...	[more]

BLAST of Pay0000585 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18470.1	2.8e-05	31.87	negative regulator of systemic acquired resistance (SNI1)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034561	Negative regulator of systemic acquired resistance SNI1	PANTHER	PTHR37243	NEGATIVE REGULATOR OF SYSTEMIC ACQUIRED RESISTANCE SNI1	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0000585.1	Pay0000585.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0002215	defense response to nematode
biological_process	GO:0043966	histone H3 acetylation
biological_process	GO:0051572	negative regulation of histone H3-K4 methylation
biological_process	GO:0010113	negative regulation of systemic acquired resistance
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0016444	somatic cell DNA recombination
biological_process	GO:0031348	negative regulation of defense response
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0000976	transcription cis-regulatory region binding