Pay0000571 (gene) Melon (Payzawat) v1

Overview
NamePay0000571
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCytochrome b6
LocationContig00288_ERROPOS136135: 29574 .. 31005 (-)
RNA-Seq ExpressionPay0000571
SyntenyPay0000571
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTGTGACTTGTTAGAATTGATCCTATGGATACGACAGAGAAGAAGTCGGTCATCTTGATGAAGATGATTTGATCTCGTTGGATATTCAGTCTAGGCTAGTATCTGGAGCACAGAATATATGAAATAGATTCCAAAATATTAGAACAAATATTAGAACTATGATTCATACTTATCAGACCTCGTGGCCGGACTCCGAAACAAGAGTTAGAAGTGATAAATAAAAAAAATTTATTCTTTCGTTTCTACTTATTTTGGTTAAAGGATAAACCTTTCTTTAGCTTTTTTCATTATATTCAGTCATTGAATAAGCATTGAATAAGTGATAATCCAAGGGTTCTTACTCAGGGAATTTTTGAACTTTTTTTGGAAGGTTTTTTATTGAATCATCGTGGTTCTAGTCTGAATCTAAGGTTTTAATTGATTCATAGGGTCTTAACAAGATAATTCCTATCAATAATAAAGAAAACAAGAGTAAAGTCGCATTACATACAAATCAAAGAAAAAAAATAGGTAAATAGAAGATTCAAGAGGCCCCTAATGATCAATATAACTATGAATGAGCCGACTTGATATTTGGGCATTATAACTACAAAGAAGACTTTTCGGATTTTGATTCTTTCGTATCTTGATACAAAAAATTGAATCATAGCATTAAGAAGTTTGAAACTTTTTAGTACACATATCCGTTACGAGCGGTATTTGGGTGTTTCTGTTTGAGCCGTACGAGACGAAATTCTCATATACGGTTCTCAGAGGGGGGTCCCCTTGGTTTACCTATCTCAATAAAGTGTATGATTGGTTCGAAGAACGTCTTGAAATTCAGGCGATTGCAGATGATATAACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACGGGGTTTGCTATGACTTTTTACTACCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCAAATTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGATTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAG

mRNA sequence

ATGAGTGTAGGGGGGTCCCCTTGGTTTACCTATCTCAATAAAGTGTATGATTGGTTCGAAGAACGTCTTGAAATTCAGGCGATTGCAGATGATATAACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACGGGGTTTGCTATGACTTTTTACTACCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCAAATTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGATTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAG

Coding sequence (CDS)

ATGAGTGTAGGGGGGTCCCCTTGGTTTACCTATCTCAATAAAGTGTATGATTGGTTCGAAGAACGTCTTGAAATTCAGGCGATTGCAGATGATATAACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACGGGGTTTGCTATGACTTTTTACTACCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCAAATTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGATTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAG

Protein sequence

MSVGGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Homology
BLAST of Pay0000571 vs. ExPASy Swiss-Prot
Match: A0A365 (Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-119
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 0

Query: 12  LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 71
           ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP
Sbjct: 1   MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 60

Query: 72  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 131
           TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT
Sbjct: 61  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 120

Query: 132 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 191
           GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL
Sbjct: 121 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 180

Query: 192 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 181 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

BLAST of Pay0000571 vs. ExPASy Swiss-Prot
Match: Q4VZI6 (Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-119
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 0

Query: 12  LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 71
           ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP
Sbjct: 1   MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 60

Query: 72  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 131
           TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT
Sbjct: 61  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 120

Query: 132 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 191
           GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL
Sbjct: 121 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 180

Query: 192 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 181 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

BLAST of Pay0000571 vs. ExPASy Swiss-Prot
Match: Q0G9I9 (Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.8e-119
Identity = 212/215 (98.60%), Postives = 215/215 (100.00%), Query Frame = 0

Query: 12  LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 71
           ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP
Sbjct: 1   MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 60

Query: 72  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 131
           TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT
Sbjct: 61  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 120

Query: 132 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 191
           GV+LAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL
Sbjct: 121 GVILAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 180

Query: 192 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 181 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

BLAST of Pay0000571 vs. ExPASy Swiss-Prot
Match: Q0G9T2 (Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.1e-119
Identity = 212/215 (98.60%), Postives = 215/215 (100.00%), Query Frame = 0

Query: 12  LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 71
           ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP
Sbjct: 1   MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 60

Query: 72  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 131
           TVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT
Sbjct: 61  TVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 120

Query: 132 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 191
           GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL
Sbjct: 121 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 180

Query: 192 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 181 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

BLAST of Pay0000571 vs. ExPASy Swiss-Prot
Match: Q68RX7 (Cytochrome b6 OS=Panax ginseng OX=4054 GN=petB PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.1e-119
Identity = 212/215 (98.60%), Postives = 215/215 (100.00%), Query Frame = 0

Query: 12  LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 71
           ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP
Sbjct: 1   MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 60

Query: 72  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 131
           TVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT
Sbjct: 61  TVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 120

Query: 132 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 191
           GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL
Sbjct: 121 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 180

Query: 192 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 181 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

BLAST of Pay0000571 vs. ExPASy TrEMBL
Match: A0A1X9Q1E4 (Cytochrome b6 (Fragment) OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.3e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 9   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 68

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 69  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 128

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 129 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 188

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 189 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 231

BLAST of Pay0000571 vs. ExPASy TrEMBL
Match: A0A1S4EU38 (Cytochrome b6 OS=Cucumis melo OX=3656 GN=petB PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.3e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 11  GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 70

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 71  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 130

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 131 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 190

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 191 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 233

BLAST of Pay0000571 vs. ExPASy TrEMBL
Match: X2F8I9 (Cytochrome b6 OS=Lagenaria siceraria OX=3668 GN=petB PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.3e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 11  GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 70

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 71  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 130

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 131 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 190

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 191 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 233

BLAST of Pay0000571 vs. ExPASy TrEMBL
Match: A0A6M8Y6H3 (Cytochrome b6 OS=Cucumis melo subsp. agrestis OX=217619 GN=petB PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.3e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 11  GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 70

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 71  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 130

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 131 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 190

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 191 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 233

BLAST of Pay0000571 vs. ExPASy TrEMBL
Match: X2F2W5 (Cytochrome b6 (Fragment) OS=Lagenaria siceraria OX=3668 GN=petB PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.3e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 9   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 68

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 69  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 128

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 129 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 188

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 189 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 231

BLAST of Pay0000571 vs. NCBI nr
Match: ABI97446.1 (cytochrome b6, partial [Cucumis sativus] >AHM91224.1 cytochrome b6, partial [Lagenaria siceraria] >ARQ16108.1 cytochrome b6, partial [Cucumis sativus] >ARQ16191.1 cytochrome b6, partial [Cucumis sativus] >ARQ16274.1 cytochrome b6, partial [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 9.0e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 9   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 68

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 69  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 128

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 129 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 188

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 189 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 231

BLAST of Pay0000571 vs. NCBI nr
Match: YP_004841813.1 (cytochrome b6 [Cucumis melo subsp. melo] >YP_009860103.1 cytochrome b6 [Cucumis melo subsp. agrestis] >AHM88691.1 cytochrome b6 [Lagenaria siceraria] >QJF46414.1 cytochrome b6 [Cucumis melo] >AEM76922.1 cytochrome b6 [Cucumis melo subsp. melo] >AHM88750.1 cytochrome b6 [Lagenaria siceraria] >AHM88808.1 cytochrome b6 [Lagenaria siceraria])

HSP 1 Score: 453.8 bits (1166), Expect = 9.0e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 11  GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 70

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 71  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 130

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 131 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 190

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 191 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 233

BLAST of Pay0000571 vs. NCBI nr
Match: QCY72872.1 (PetB [Cucumis hystrix])

HSP 1 Score: 453.8 bits (1166), Expect = 9.0e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 20  GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 79

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 80  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 139

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 140 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 199

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 200 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 242

BLAST of Pay0000571 vs. NCBI nr
Match: YP_009456091.1 (cytochrome b6 [Momordica charantia] >AUJ21858.1 cytochrome b6 [Momordica charantia])

HSP 1 Score: 453.8 bits (1166), Expect = 9.0e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 23  GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 82

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 83  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 142

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 143 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 202

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 203 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 245

BLAST of Pay0000571 vs. NCBI nr
Match: AHM88865.1 (cytochrome b6, partial [Lagenaria siceraria])

HSP 1 Score: 452.2 bits (1162), Expect = 2.6e-123
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 4   GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 63
           GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF
Sbjct: 11  GGSPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGF 70

Query: 64  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 123
           AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK
Sbjct: 71  AMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKK 130

Query: 124 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 183
           PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS
Sbjct: 131 PRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 190

Query: 184 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGP 226
           ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGP
Sbjct: 191 ASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGP 232

BLAST of Pay0000571 vs. TAIR 10
Match: ATCG00720.1 (photosynthetic electron transfer B )

HSP 1 Score: 420.6 bits (1080), Expect = 7.8e-118
Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 12  LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 71
           ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP
Sbjct: 1   MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 60

Query: 72  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 131
           TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT
Sbjct: 61  TVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 120

Query: 132 GVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTL 191
           GVVL VLTASFGVTGYSLP DQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTL
Sbjct: 121 GVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTL 180

Query: 192 TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 227
           TRFYSLHTFVLPLLTAVFMLMHF MIRKQGISGPL
Sbjct: 181 TRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

BLAST of Pay0000571 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 131.3 bits (329), Expect = 9.5e-31
Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = 0

Query: 38  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVH 97
           P +++ ++  G +   C ++Q+ TG  +  +Y P V  AF SV++IM +   GWL+R +H
Sbjct: 29  PSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMH 88

Query: 98  RWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYW 157
              ASM ++++ LH+FR      +  PRE  W  GVV+ +L       GY LP  Q+ +W
Sbjct: 89  ANGASMFLIVVYLHIFRGLYHASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFW 148

Query: 158 AVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMI 217
              ++T +  AIPV+G  +V  L G  SV  +TL RF+SLH  +LP +     L+H   +
Sbjct: 149 GATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLH-HLLPFILVGASLLHLAAL 208

Query: 218 RKQGISGPL 227
            + G + PL
Sbjct: 209 HQYGSNNPL 216

BLAST of Pay0000571 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 131.3 bits (329), Expect = 9.5e-31
Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = 0

Query: 38  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVH 97
           P +++ ++  G +   C ++Q+ TG  +  +Y P V  AF SV++IM +   GWL+R +H
Sbjct: 29  PSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMH 88

Query: 98  RWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYW 157
              ASM ++++ LH+FR      +  PRE  W  GVV+ +L       GY LP  Q+ +W
Sbjct: 89  ANGASMFLIVVYLHIFRGLYHASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFW 148

Query: 158 AVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMI 217
              ++T +  AIPV+G  +V  L G  SV  +TL RF+SLH  +LP +     L+H   +
Sbjct: 149 GATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLH-HLLPFILVGASLLHLAAL 208

Query: 218 RKQGISGPL 227
            + G + PL
Sbjct: 209 HQYGSNNPL 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A3651.4e-11999.07Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1[more]
Q4VZI61.4e-11999.07Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1[more]
Q0G9I91.8e-11998.60Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1[more]
Q0G9T23.1e-11998.60Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1[more]
Q68RX73.1e-11998.60Cytochrome b6 OS=Panax ginseng OX=4054 GN=petB PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A1X9Q1E44.3e-124100.00Cytochrome b6 (Fragment) OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1[more]
A0A1S4EU384.3e-124100.00Cytochrome b6 OS=Cucumis melo OX=3656 GN=petB PE=3 SV=1[more]
X2F8I94.3e-124100.00Cytochrome b6 OS=Lagenaria siceraria OX=3668 GN=petB PE=3 SV=1[more]
A0A6M8Y6H34.3e-124100.00Cytochrome b6 OS=Cucumis melo subsp. agrestis OX=217619 GN=petB PE=3 SV=1[more]
X2F2W54.3e-124100.00Cytochrome b6 (Fragment) OS=Lagenaria siceraria OX=3668 GN=petB PE=3 SV=1[more]
Match NameE-valueIdentityDescription
ABI97446.19.0e-124100.00cytochrome b6, partial [Cucumis sativus] >AHM91224.1 cytochrome b6, partial [Lag... [more]
YP_004841813.19.0e-124100.00cytochrome b6 [Cucumis melo subsp. melo] >YP_009860103.1 cytochrome b6 [Cucumis ... [more]
QCY72872.19.0e-124100.00PetB [Cucumis hystrix][more]
YP_009456091.19.0e-124100.00cytochrome b6 [Momordica charantia] >AUJ21858.1 cytochrome b6 [Momordica charant... [more]
AHM88865.12.6e-123100.00cytochrome b6, partial [Lagenaria siceraria][more]
Match NameE-valueIdentityDescription
ATCG00720.17.8e-11897.21photosynthetic electron transfer B [more]
AT2G07727.19.5e-3134.92Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal [more]
ATMG00220.19.5e-3134.92apocytochrome b [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027387Cytochrome b/b6-like domain superfamilyGENE3D1.20.810.10Cytochrome Bc1 Complex; Chain Ccoord: 8..226
e-value: 3.6E-92
score: 310.9
IPR005797Cytochrome b/b6, N-terminalPFAMPF00033Cytochrome_Bcoord: 33..221
e-value: 4.9E-85
score: 284.1
IPR005797Cytochrome b/b6, N-terminalPROSITEPS51002CYTB_NTERcoord: 15..226
score: 36.800606
IPR005797Cytochrome b/b6, N-terminalCDDcd00284Cytochrome_b_Ncoord: 25..223
e-value: 2.12261E-92
score: 267.697
NoneNo IPR availablePIRSFPIRSF000032Cytochrome_b6coord: 12..226
e-value: 2.5E-120
score: 397.9
NoneNo IPR availablePANTHERPTHR19271CYTOCHROME Bcoord: 22..226
IPR023530Cytochrome b6, PetBPANTHERPTHR19271:SF20SUBFAMILY NOT NAMEDcoord: 22..226
IPR023530Cytochrome b6, PetBHAMAPMF_00633Cytb6_f_cytb6coord: 12..226
score: 45.141121
IPR016174Di-haem cytochrome, transmembraneSUPERFAMILY81342Transmembrane di-heme cytochromescoord: 16..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0000571.1Pay0000571.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0022904 respiratory electron transport chain
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016491 oxidoreductase activity