Pay0000468 (gene) Melon (Payzawat) v1

Overview


Name	Pay0000468
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Nipped-B-like protein B
Location	chr11: 18117432 .. 18117982 (-)
RNA-Seq Expression	Pay0000468
Synteny	Pay0000468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGAGGGAGAGAGAGTTCGGATGGAGTTGTAA

mRNA sequence

AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGAGGGAGAGAGAGTTCGGATGGAGTTGTAA

Coding sequence (CDS)

AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGAGGGAGAGAGAGTTCGGATGGAGTTGTAA

Protein sequence

RERERERERERERGEKRERERERERRERERGERRERERERERERERERERERGERERERERERERERERERERERERERERERERERRERERERREREREREREREREREREREERERERERRERERERERERGEREREREKRERERERERERERERERERERERERGREREREGERVRMEL

Homology

[Close]

BLAST of Pay0000468 vs. ExPASy TrEMBL
Match: A0A1Q9D0D3 (Nipped-B-like protein B OS=Symbiodinium microadriaticum OX=2951 GN=nipblb PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13
Identity = 168/187 (89.84%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1    RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
            RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 1289 RERERERERERERERERERERERERERERERERERERERERERERERERERER-ERERER 1348

Query: 61   ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
            ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 1349 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 1408

Query: 121  ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
            ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 1409 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 1468

Query: 181  GERVRME 182
             ER R E
Sbjct: 1469 RERERRE 1473

[Close]

BLAST of Pay0000468 vs. ExPASy TrEMBL
Match: A0A7R8Z8T7 (Hypothetical protein OS=Timema douglasi OX=61478 GN=TDIB3V08_LOCUS4129 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13
Identity = 168/188 (89.36%), Postives = 170/188 (90.43%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
           RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 232 RERERERERERERERERERERERERERERERERERERERERERERERERERER-ERERER 291

Query: 61  ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
           ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 292 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 351

Query: 121 ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
           ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 352 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 411

Query: 181 GERVRMEL 183
            ER R  L
Sbjct: 412 RERERDHL 417

[Close]

BLAST of Pay0000468 vs. ExPASy TrEMBL
Match: A0A7R9F2S9 (Hypothetical protein OS=Timema bartmani OX=61472 GN=TBIB3V08_LOCUS7150 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.5e-13
Identity = 167/185 (90.27%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
           RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 113 RERERERERERERERERERERERERERERERERERERERERERERERERERER-ERERER 172

Query: 61  ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
           ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 173 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 232

Query: 121 ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
           ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 233 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 292

[Close]

BLAST of Pay0000468 vs. ExPASy TrEMBL
Match: A0A7R9E196 (Hypothetical protein OS=Timema monikensis OX=170555 GN=TMSB3V08_LOCUS2479 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.5e-13
Identity = 167/185 (90.27%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
           RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 62  RERERERERERERERERERERERERERERERERERERERERERERERERERER-ERERER 121

Query: 61  ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
           ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 122 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 181

Query: 121 ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
           ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 182 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 241

[Close]

BLAST of Pay0000468 vs. ExPASy TrEMBL
Match: A0A7R9HDJ3 (Hypothetical protein OS=Timema poppense OX=170557 GN=TPSB3V08_LOCUS11549 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.5e-13
Identity = 167/185 (90.27%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
           RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 495 RERERERERERERERERERERERERERERERERERERERERERERERERERER-ERERER 554

Query: 61  ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
           ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 555 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 614

Query: 121 ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
           ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 615 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 674

[Close]

BLAST of Pay0000468 vs. NCBI nr
Match: KAF5168789.1 (hypothetical protein HST_G00056220 [Hippoglossus stenolepis])

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-14
Identity = 168/204 (82.35%), Postives = 169/204 (82.84%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERERRERERGERRERERERERERERERERERGERERERE 60
           RERERERERERERG +RERERERE RERER   RERERERERERERERERERGERERERE
Sbjct: 375 RERERERERERERGRERERERERE-RERERERERERERERERERERERERERGERERERE 434

Query: 61  RERERE-----------------RERERERERERERERERERERRERERER-----RERE 120
           RERERE                 RERERERERERERERERERER ERERER     RERE
Sbjct: 435 REREREREREREREREREREREKRERERERERERERERERERERGERERERERERERERE 494

Query: 121 RERERERERERERERE-ERERERER-RERERERERER-GEREREREKRERERERERERER 180
           RERERERERERERERE ERERERER RERERERERER  EREREREKRERERERERERER
Sbjct: 495 REREREREREREREREREREREREREREREREREREREREREREREKRERERERERERER 554

[Close]

BLAST of Pay0000468 vs. NCBI nr
Match: OLP88639.1 (Nipped-B-like protein B [Symbiodinium microadriaticum])

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-13
Identity = 168/187 (89.84%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1    RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
            RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 1289 RERERERERERERERERERERERERERERERERERERERERERERERERERER-ERERER 1348

Query: 61   ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
            ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 1349 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 1408

Query: 121  ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
            ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 1409 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 1468

Query: 181  GERVRME 182
             ER R E
Sbjct: 1469 RERERRE 1473

[Close]

BLAST of Pay0000468 vs. NCBI nr
Match: KAF5170901.1 (hypothetical protein HST_G00033700 [Hippoglossus stenolepis])

HSP 1 Score: 85.9 bits (211), Expect = 4.0e-13
Identity = 167/185 (90.27%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
           RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 117 RERERERERERERERERERERERERERERERDRERERERERERERERERERER-ERERER 176

Query: 61  ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
           ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 177 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 236

Query: 121 ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
           ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 237 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 296

[Close]

BLAST of Pay0000468 vs. NCBI nr
Match: CAD7197830.1 (unnamed protein product [Timema douglasi])

HSP 1 Score: 85.9 bits (211), Expect = 4.0e-13
Identity = 168/188 (89.36%), Postives = 170/188 (90.43%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
           RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 232 RERERERERERERERERERERERERERERERERERERERERERERERERERER-ERERER 291

Query: 61  ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
           ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 292 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 351

Query: 121 ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
           ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 352 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 411

Query: 181 GERVRMEL 183
            ER R  L
Sbjct: 412 RERERDHL 417

[Close]

BLAST of Pay0000468 vs. NCBI nr
Match: KAF5171765.1 (hypothetical protein HST_G00021250 [Hippoglossus stenolepis])

HSP 1 Score: 85.9 bits (211), Expect = 4.0e-13
Identity = 167/185 (90.27%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   RERERERERERERGEKRERERERER-RERERGERRERERERERERERERERERGERERER 60
           RERERERERERER  +RERERERER RERER   RERERERERERERERERER ERERER
Sbjct: 302 RERERERERERERDRERERERERERERERERERERERERERERERERERERER-ERERER 361

Query: 61  ERERERERERERERERERERERERERER-RERERER-RERERERERERERERERERE-ER 120
           ERERERERERERERERERERERERERER RERERER RERERERERERERERERERE ER
Sbjct: 362 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 421

Query: 121 ERERER-RERERERERERGEREREREK-RERERERERERERERERERERERERGRERERE 180
           ERERER RERERERERER ERERERE+ RERERERERERERERERERERERER RERERE
Sbjct: 422 ERERERERERERERERER-ERERERERERERERERERERERERERERERERERERERERE 481

The following BLAST results are available for this feature:

BLAST of Pay0000468 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0000468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Q9D0D3	1.1e-13	89.84	Nipped-B-like protein B OS=Symbiodinium microadriaticum OX=2951 GN=nipblb PE=4 S...	[more]
A0A7R8Z8T7	1.9e-13	89.36	Hypothetical protein OS=Timema douglasi OX=61478 GN=TDIB3V08_LOCUS4129 PE=4 SV=1	[more]
A0A7R9F2S9	2.5e-13	90.27	Hypothetical protein OS=Timema bartmani OX=61472 GN=TBIB3V08_LOCUS7150 PE=4 SV=1	[more]
A0A7R9E196	2.5e-13	90.27	Hypothetical protein OS=Timema monikensis OX=170555 GN=TMSB3V08_LOCUS2479 PE=4 S...	[more]
A0A7R9HDJ3	2.5e-13	90.27	Hypothetical protein OS=Timema poppense OX=170557 GN=TPSB3V08_LOCUS11549 PE=4 SV...	[more]

BLAST of Pay0000468 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF5168789.1	2.1e-14	82.35	hypothetical protein HST_G00056220 [Hippoglossus stenolepis]	[more]
OLP88639.1	2.3e-13	89.84	Nipped-B-like protein B [Symbiodinium microadriaticum]	[more]
KAF5170901.1	4.0e-13	90.27	hypothetical protein HST_G00033700 [Hippoglossus stenolepis]	[more]
CAD7197830.1	4.0e-13	89.36	unnamed protein product [Timema douglasi]	[more]
KAF5171765.1	4.0e-13	90.27	hypothetical protein HST_G00021250 [Hippoglossus stenolepis]	[more]

BLAST of Pay0000468 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0000468.1	Pay0000468.1	mRNA